BLASTX nr result

ID: Ephedra25_contig00026583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00026583
         (512 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001760235.1| predicted protein [Physcomitrella patens] gi...   131   1e-28
ref|XP_001785617.1| predicted protein [Physcomitrella patens] gi...    81   1e-13
ref|XP_002991318.1| hypothetical protein SELMODRAFT_448362 [Sela...    75   1e-11
gb|ADE76233.1| unknown [Picea sitchensis]                              75   1e-11
ref|XP_002987943.1| hypothetical protein SELMODRAFT_447140 [Sela...    74   3e-11

>ref|XP_001760235.1| predicted protein [Physcomitrella patens]
           gi|162688615|gb|EDQ74991.1| predicted protein
           [Physcomitrella patens]
          Length = 603

 Score =  131 bits (329), Expect = 1e-28
 Identities = 71/156 (45%), Positives = 89/156 (57%), Gaps = 23/156 (14%)
 Frame = +2

Query: 110 IPPPKFPANPPSICKDANEGFVLKDTEICTDSCGKLCFPRVHGICFGHTQVTICD----- 274
           +PP  F A   S C D    + + +  +CT++CGK+CFPRVHG+C   TQVTICD     
Sbjct: 74  VPPLSF-ARTTSSCLDEGTDYQISEHYLCTNACGKVCFPRVHGMCISRTQVTICDDLPYF 132

Query: 275 -----TQREGYPRVMRFDAGKPRQKVPVKVGTCPP-KIKKHGAV-----------WIEGL 403
                    G P  +R     PR +V VK GTCP    + H  V           WI GL
Sbjct: 133 SKDIIKAGGGLPDTLRLITNVPRDRVRVKRGTCPGWDSRLHEPVDASGGERTQGHWIRGL 192

Query: 404 QMVADLTLMPHG-KAGPNPHHESEKIVPAILISQLY 508
           QMVAD+ LMPHG K GPNPHHE+EK++PA+L+S LY
Sbjct: 193 QMVADVKLMPHGKKVGPNPHHEAEKLIPAVLLSHLY 228


>ref|XP_001785617.1| predicted protein [Physcomitrella patens]
           gi|162662750|gb|EDQ49564.1| predicted protein
           [Physcomitrella patens]
          Length = 568

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
 Frame = +2

Query: 188 EICTDSCGKLCFPRVHGICFGHTQVTICD-TQREGYPRVMRFDAGKPRQKVPVKVGT-CP 361
           + CT  C   CF RV  ICF   +V IC  ++R   P+ +RF   K  + VPV+ G+ C 
Sbjct: 101 QYCTGECNTECFSRVDNICFATDKVRICGGSRRSDLPKFIRFFGEK--RTVPVEWGSGC- 157

Query: 362 PKIKKHGAVWIEGLQMVADLTLMPHGKAGPNPHHESEKIVPAILISQ 502
                 G  WI GL +VAD   +P GK  PNPHHE+EK++PA+L+ Q
Sbjct: 158 ----NEGWHWISGLSLVADQRFLPAGK--PNPHHEAEKLIPAVLLKQ 198


>ref|XP_002991318.1| hypothetical protein SELMODRAFT_448362 [Selaginella moellendorffii]
           gi|300140898|gb|EFJ07616.1| hypothetical protein
           SELMODRAFT_448362 [Selaginella moellendorffii]
          Length = 256

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
 Frame = +2

Query: 209 GKLCFPRV-HGICFGHTQVTICDTQREGYPRVMRFDAGKPRQKVPVKVGTCPPKIKKHGA 385
           G  CF R+  GIC   ++V +CD +  G PR++RF+    R  +PV  G C     +   
Sbjct: 52  GGTCFHRLSRGICISASEVRVCDDRPTGLPRILRFEG--ERVTLPVVSGEC----SRASG 105

Query: 386 VWIEGLQMVADLTLMPHGKAGPNPHHESEKIVPAILIS 499
            WI G  M+AD   +P+ K  PNPHHE+EK++PA L++
Sbjct: 106 RWITGTSMLADQRFLPYHK--PNPHHEAEKLIPATLLA 141


>gb|ADE76233.1| unknown [Picea sitchensis]
          Length = 440

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 53/159 (33%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
 Frame = +2

Query: 116 PPKFPANPP--SICKDANEGFVLKDTEICTDSCGKLCFPRVHGICFGHTQVTICDTQRE- 286
           P  F  NPP  S C+     F L+D+     +C   CFPRV G+C   +QV  C    E 
Sbjct: 63  PRDFSLNPPPESSCEVPGPRFALEDSGFRIGACRPECFPRVKGLCISSSQVEYCKITEEE 122

Query: 287 ------------------------GYPRVMRFDAGKPRQKVPVKVGTCPPKIKKHGAVWI 394
                                     P  MRF     R  +PV    C  + K      I
Sbjct: 123 EDIASTETIYPSTDEKNLLLPKCLKMPNFMRFSG--ERLTLPVMPSVCGQEKK-----GI 175

Query: 395 EGLQMVADLTLMPHGKAGPNPHHESEKIVPAILISQLYQ 511
            GL +VAD   +P+ K  PNPHHE+EKI+PA+L  Q Y+
Sbjct: 176 PGLSLVADQRYLPYKK--PNPHHEAEKIIPALLFLQHYE 212


>ref|XP_002987943.1| hypothetical protein SELMODRAFT_447140 [Selaginella moellendorffii]
           gi|300144332|gb|EFJ11017.1| hypothetical protein
           SELMODRAFT_447140 [Selaginella moellendorffii]
          Length = 470

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
 Frame = +2

Query: 209 GKLCFPRV-HGICFGHTQVTICDTQREGYPRVMRFDAGKPRQKVPVKVGTCPPKIKKHGA 385
           G  CF R+  GIC   ++V +CD    G PR++RF+    R  +PV  G C     +   
Sbjct: 56  GGTCFHRLSRGICISASEVRVCDDLPTGLPRILRFEG--ERVTLPVVSGEC----SRASG 109

Query: 386 VWIEGLQMVADLTLMPHGKAGPNPHHESEKIVPAILIS 499
            WI G  M+AD   +P+ K  PNPHHE+EK++PA L++
Sbjct: 110 RWITGTSMLADQRFLPYHK--PNPHHEAEKLIPATLLA 145


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