BLASTX nr result

ID: Ephedra25_contig00026557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00026557
         (794 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]   117   5e-24
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   114   3e-23
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   111   3e-22
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   110   4e-22
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         109   1e-21
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   109   1e-21
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             108   3e-21
ref|XP_003382107.1| retrovirus-related Pol polyprotein from tran...   108   3e-21
ref|XP_003375245.1| putative integrase core domain protein [Tric...   107   5e-21
ref|XP_003370196.1| putative integrase core domain protein [Tric...   107   5e-21
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...   107   5e-21
gb|ABW74566.1| integrase [Boechera divaricarpa]                       107   6e-21
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              107   6e-21
emb|CAN70831.1| hypothetical protein VITISV_005284 [Vitis vinifera]   107   6e-21
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   107   6e-21
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              106   8e-21
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]           106   1e-20
gb|EOY19976.1| Retrotransposon protein, unclassified, putative [...   105   1e-20
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         105   1e-20
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   105   1e-20

>emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]
          Length = 894

 Score =  117 bits (293), Expect = 5e-24
 Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 5/265 (1%)
 Frame = -2

Query: 781 WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKY-FYLVPXXXXXXXX 605
           +WA+A  T+ YL N  P +SL  K P E W   K      K F    +Y VP        
Sbjct: 218 FWAEAVNTSVYLLNRLPTKSLKNKTPYEEWYGVKPFVNHLKIFGSICYYHVPEPKRSKLD 277

Query: 604 XXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVT----NLKDDQSECLNMN 437
              + G  IGY + TKG+R+   Q NK+V +RN+  K ++  T    N K  QS+    N
Sbjct: 278 SRAQKGILIGYGTSTKGYRIFCLQTNKVVLSRNV--KVDEMATWDCKNKKYAQSDVDFNN 335

Query: 436 DPNHASTEDVTPIPTRNHITKRMPR*YKLMMEEAENFVNRKSIQANIYTKIDMYIPSTPE 257
             +  +++ V   P R              +   E+   R S+     T+   Y+ +   
Sbjct: 336 HEDFQTSKSVDDFPVRG-------------IRSLEDIYQRCSLAI---TEPTSYVEAKDS 379

Query: 256 KAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDESLDKYKSRI 77
           +A     W+ AM EEL+ + +   W L E PK  + IG  W+F  KL +D S+ K+K+++
Sbjct: 380 EA-----WRRAMQEELKMINKNETWQLVERPKNHKVIGVKWVFKTKLNSDGSICKHKAKL 434

Query: 76  VAKGYLKNVGIDYKETFTATVKMRT 2
           V KGY +  G+DYKETF    +  T
Sbjct: 435 VVKGYAQQYGVDYKETFAPVARYDT 459


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  114 bits (286), Expect = 3e-23
 Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 12/272 (4%)
 Frame = -2

Query: 781  WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYLVPXXXXXXXXX 602
            +WA+   TA YL N  P +++  + P E W  +K      K F    Y +          
Sbjct: 737  FWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLXBSHNRSKLD 796

Query: 601  XXKVGK-FIGYPSDTKGFRLLDTQENKIVPARNI-FDKEEDKVTNLKDDQSECLNMNDPN 428
               V   FIGY S +KG++L +    KI+ +RN+ FD++      + +D +     ++  
Sbjct: 797  EKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASXTWRVSEDGALVEISSESE 856

Query: 427  HASTEDVTPI------PTRNHITKRMPR*YKLMMEEAENFVNRK--SIQANIYTKIDMYI 272
             A +ED  P       PT +H             + +E    RK  S++    T   +++
Sbjct: 857  MAQSEDQQPSVQIPXSPTPSHSPSSPNLSXSSSSQSSEETPPRKFRSLRDIYETTQVLFV 916

Query: 271  --PSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDESL 98
              P+T E+A     W  AM EE+  +++   W L ELP+ K  IG  W+F  K + D S+
Sbjct: 917  ADPTTFEEAVEKEEWCSAMKEEIAAIEKNETWELVELPEDKNVIGVKWVFRTKYLADGSI 976

Query: 97   DKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
             K+K+R+VAKGY +  G+DY +TF+   +  T
Sbjct: 977  QKHKARLVAKGYAQQHGVDYDDTFSPVARFET 1008


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  111 bits (277), Expect = 3e-22
 Identities = 78/276 (28%), Positives = 135/276 (48%), Gaps = 17/276 (6%)
 Frame = -2

Query: 778  WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXXXXX 602
            WA+A   A YL N  P +S++ K P E W+ +K+     + F    +  VP         
Sbjct: 656  WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDD 715

Query: 601  XXKVGKFIGYPSDTKGFRLLDTQENKIVPARNI-FDKEEDKVTN-----------LKDDQ 458
              +   FIGY +++KG++L +    K + +RNI FD+E +   N            ++D+
Sbjct: 716  KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDE 775

Query: 457  SECLNMNDPNHASTEDVTPIPTRNHI----TKRMPR*YKLMMEEAENFVNRKSIQANIYT 290
             E      P+   T   T  PT + I    ++R PR ++ + E  E   N++++   ++ 
Sbjct: 776  PEPTREEPPSEEPTTPPTS-PTSSQIEESSSERTPR-FRSIQELYEVTENQENL--TLFC 831

Query: 289  KIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMT 110
                  P   ++A     W+ AM EE++ +++   W L  LP G +TIG  W++  K  +
Sbjct: 832  LFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNS 891

Query: 109  DESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
               +++YK+R+VAKGY++  GIDY E F    ++ T
Sbjct: 892  KGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLET 927


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  110 bits (276), Expect = 4e-22
 Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 12/272 (4%)
 Frame = -2

Query: 781  WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFY-LVPXXXXXXXX 605
            +WA+   TA YL N  P +++  + P E W  +K      K F    Y L+         
Sbjct: 626  FWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLIDSHNHSNLD 685

Query: 604  XXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVT-NLKDDQSECLNMNDPN 428
                   FIGY S +KG++L +    KI+ +RN+   E+   T  + +D +     ++  
Sbjct: 686  EKSIKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVXDEKASWTWRVSEDGALVEISSESE 745

Query: 427  HASTEDVTP------IPTRNHITKRMPR*YKLMMEEAENFVNRK--SIQANIYTKIDMYI 272
             A +ED  P       PT +H             + +E    RK  S++    T   +++
Sbjct: 746  VAQSEDQQPSVQIPAXPTPSHSPSSPNLSSSSSSQSSEETPPRKFRSLRDIYETTQVLFV 805

Query: 271  --PSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDESL 98
              P+T E+A     W  AM EE+  +++   W L ELP+ K  IG  W+F  K + D S+
Sbjct: 806  ADPTTFEEAVEKEEWCSAMKEEIVAIEKNETWELVELPEDKNVIGVKWVFRTKYLADGSI 865

Query: 97   DKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
             K+K+R+VAKGY +  G+DY +TF+   +  T
Sbjct: 866  QKHKARLVAKGYAQQHGVDYDDTFSPVARFET 897


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  109 bits (273), Expect = 1e-21
 Identities = 79/276 (28%), Positives = 133/276 (48%), Gaps = 17/276 (6%)
 Frame = -2

Query: 778  WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXXXXX 602
            WA+A   A YL N  P +S++ K P E W+ +K      + F    +  VP         
Sbjct: 656  WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDD 715

Query: 601  XXKVGKFIGYPSDTKGFRLLDTQENKIVPARNI-FDKEEDKVTN-----------LKDDQ 458
              +   FIGY +++KG++L +    K + +RNI FD+E +   N            ++D+
Sbjct: 716  KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDE 775

Query: 457  SECLNMNDPNHASTEDVTPIPTRNHI----TKRMPR*YKLMMEEAENFVNRKSIQANIYT 290
             E      P+   T   T  PT + I    ++R PR ++ + E  E   N++++   ++ 
Sbjct: 776  PEPTREEPPSEEPTTPPTS-PTSSQIEESSSERTPR-FRSIQELYEVTENQENL--TLFC 831

Query: 289  KIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMT 110
                  P   +KA     W+ AM EE++ +++   W L  LP G + IG  W++  K  +
Sbjct: 832  LFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNS 891

Query: 109  DESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
               +++YK+R+VAKGY + VGIDY E F    ++ T
Sbjct: 892  KGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLET 927


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  109 bits (273), Expect = 1e-21
 Identities = 79/276 (28%), Positives = 133/276 (48%), Gaps = 17/276 (6%)
 Frame = -2

Query: 778  WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXXXXX 602
            WA+A   A YL N  P +S++ K P E W+ +K      + F    +  VP         
Sbjct: 656  WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDD 715

Query: 601  XXKVGKFIGYPSDTKGFRLLDTQENKIVPARNI-FDKEEDKVTN-----------LKDDQ 458
              +   FIGY +++KG++L +    K + +RNI FD+E +   N            ++D+
Sbjct: 716  KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDE 775

Query: 457  SECLNMNDPNHASTEDVTPIPTRNHI----TKRMPR*YKLMMEEAENFVNRKSIQANIYT 290
             E      P+   T   T  PT + I    ++R PR ++ + E  E   N++++   ++ 
Sbjct: 776  PEPTREEPPSEEPTTPPTS-PTSSQIEESSSERTPR-FRSIQELYEVTENQENL--TLFC 831

Query: 289  KIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMT 110
                  P   +KA     W+ AM EE++ +++   W L  LP G + IG  W++  K  +
Sbjct: 832  LFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNS 891

Query: 109  DESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
               +++YK+R+VAKGY + VGIDY E F    ++ T
Sbjct: 892  KGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLET 927


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  108 bits (269), Expect = 3e-21
 Identities = 79/290 (27%), Positives = 136/290 (46%), Gaps = 28/290 (9%)
 Frame = -2

Query: 787  K*WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFY-LVPXXXXXX 611
            K +WA+A  TA YL N  P  ++ +K P E+W  K   Y +   F    Y +        
Sbjct: 597  KSFWAEAVNTACYLVNRAPSTAIELKTPMEMWTGKPVDYSNLHIFGSIVYAMYNAQEITK 656

Query: 610  XXXXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIF---------------DKEEDKVT 476
                 +  +F+GY    KG+RL D   +K+V +R++                +KE+ + T
Sbjct: 657  LDPKSRKCRFLGYADGVKGYRLWDPTAHKVVISRDVIFVEDRLQRGEVDDSTEKEKPETT 716

Query: 475  NLK------DDQSECLNMNDPNHASTEDVT---PIPTRNHITKRMPR*YKLMMEEAENFV 323
             ++       D SE     +P H   E  +   P   ++   KR P  +        ++V
Sbjct: 717  QIQVEEEFEQDSSEA----EPAHEEPEPESSGAPTTRQSDREKRRPTWHS-------DYV 765

Query: 322  NRKSIQANIYTKIDMYIPSTPEKAYS---ISHWKEAMLEELRRMKEK*VWALEELPKGKE 152
               ++   + T+     PST ++A +   +S W  AM EE+  + +   W L  LP+G++
Sbjct: 766  MEGNVAYCLLTEDGE--PSTFQEAINSSDVSQWTAAMQEEIEALHKNNTWDLVPLPQGRK 823

Query: 151  TIGSMWLFNIKLMTDESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
             IG+ W+F IK   D+ +++Y++R+V KGY +  GID+ E F+  V++ T
Sbjct: 824  PIGNKWVFKIKRNGDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTT 873


>ref|XP_003382107.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trichinella spiralis] gi|316978962|gb|EFV61839.1|
           retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Trichinella spiralis]
          Length = 567

 Score =  108 bits (269), Expect = 3e-21
 Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 15/274 (5%)
 Frame = -2

Query: 778 WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFW--KYFYLVPXXXXXXXX 605
           WA+A  TA Y+ N     ++  K P ELW  +  +       +  + F  VP        
Sbjct: 159 WAEAVNTACYVLNRTGPTTVKGKSPIELWFKRDPVSIDHFHVFGTECFVHVPKQRRRKWE 218

Query: 604 XXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEED----KVTNLKDDQSECLNMN 437
                G+F+GY  +  G+R+     N+IV +R+I  K E+       ++K D SE     
Sbjct: 219 KKSVAGRFMGYCDEKDGYRIWLPDINQIVTSRDILFKPEEIRLSSKMSVKADSSEKNEEE 278

Query: 436 DPNHASTEDVTPIPTRNHITKRMPR*YKLMMEEAENFVNRKSIQA--NIYTKIDMYIPST 263
           D   A  E++         +K      +  ME+ E+ ++ K ++   N  +   + + + 
Sbjct: 279 DDPDA--EELRLELNSQWTSKEAECEVETKMEQEEDALSSKRVRKMPNYLSDYVLTVQTP 336

Query: 262 PEKAY-------SISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDE 104
           P  ++         + W++AM EEL  ++E  VW L + P GK+ + S W+  IK   D 
Sbjct: 337 PPSSFHEAMQSVDAADWRKAMEEELHSLEENSVWTLVDPPSGKKVLDSRWVLRIKTKADR 396

Query: 103 SLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
           S+ +YK+R+VAKGY++  GIDY ETF+   +  T
Sbjct: 397 SVARYKARLVAKGYMQRPGIDYDETFSPVARFDT 430


>ref|XP_003375245.1| putative integrase core domain protein [Trichinella spiralis]
            gi|316971451|gb|EFV55218.1| putative integrase core
            domain protein [Trichinella spiralis]
          Length = 1249

 Score =  107 bits (267), Expect = 5e-21
 Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 15/274 (5%)
 Frame = -2

Query: 778  WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFW--KYFYLVPXXXXXXXX 605
            WA+A  TA Y+ N     ++  K P ELW  +  +       +  + F  VP        
Sbjct: 560  WAEAVNTACYVLNRTGPTTVKGKSPIELWFKRDPVSIDHFHVFGTECFVHVPKQRRRKWE 619

Query: 604  XXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEED----KVTNLKDDQSECLNMN 437
                 G+F+GY  +  G+R+     N+IV +R+I  K E+       ++K D SE     
Sbjct: 620  KKSVAGRFMGYCDEKDGYRIWLPDINQIVTSRDILFKPEEIRLSSKMSVKADSSEKNEEE 679

Query: 436  DPNHASTEDVTPIPTRNHITKRMPR*YKLMMEEAENFVNRKSIQA--NIYTKIDMYIPST 263
            D   A  E++         +K      +  ME+ E+ ++ K ++   N  +   + + + 
Sbjct: 680  DDPDA--EELRLELNSQWTSKEAECEVETKMEQEEDALSSKRVRKMPNYLSDYVLTVQTP 737

Query: 262  PEKAY-------SISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDE 104
            P  ++         + W++AM EEL  ++E  VW L + P GK+ + S W+  IK   D 
Sbjct: 738  PPSSFHEAMQSVDAADWRKAMEEELHSLEENSVWTLVDPPSGKKVLDSRWVLRIKTKADG 797

Query: 103  SLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
            S+ +YK+R+VAKGY++  GIDY ETF+   +  T
Sbjct: 798  SVARYKARLVAKGYMQRPGIDYDETFSPVARFDT 831


>ref|XP_003370196.1| putative integrase core domain protein [Trichinella spiralis]
            gi|316964977|gb|EFV49847.1| putative integrase core
            domain protein [Trichinella spiralis]
          Length = 1249

 Score =  107 bits (267), Expect = 5e-21
 Identities = 77/274 (28%), Positives = 130/274 (47%), Gaps = 15/274 (5%)
 Frame = -2

Query: 778  WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFW--KYFYLVPXXXXXXXX 605
            WA+A  TA Y+ N     ++  K P ELW  +  +       +  + F  VP        
Sbjct: 560  WAEAVNTACYVLNRTGPTTVKGKSPIELWFKRDPVSIDHFHVFGTECFVHVPKQRRRKWE 619

Query: 604  XXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVTN----LKDDQSECLNMN 437
                 G+F+GY  +  G+R+     N+IV +R+I  K E+ + +    +K D SE     
Sbjct: 620  KKSVAGRFMGYCDEKDGYRIWLPDINQIVTSRDILFKPEEILLSSKMSVKADSSEKNEEE 679

Query: 436  DPNHASTEDVTPIPTRNHITKRMPR*YKLMMEEAENFVNRKSIQA--NIYTKIDMYIPST 263
            D   A  E++         +K      +  ME+ E+ ++ K ++   N  +   + + + 
Sbjct: 680  DDPDA--EELRLELNSQWTSKEAECEVETKMEQEEDALSSKRVRKMPNYLSDYVLTVQTP 737

Query: 262  PEKAY-------SISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDE 104
            P  ++         + W++AM EEL  ++E  VW L + P GK+ + S W+  IK   D 
Sbjct: 738  PPSSFHEAMQSVDAADWRKAMEEELHSLEENSVWTLVDPPSGKKVLDSRWVLRIKTKADG 797

Query: 103  SLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
            S+ +YK+R+VAKGY++  GIDY ETF+   +  T
Sbjct: 798  SVARYKARLVAKGYMQRPGIDYDETFSPVARFDT 831


>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
            copia-type polyprotein [Glycine max]
          Length = 1042

 Score =  107 bits (267), Expect = 5e-21
 Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 23/285 (8%)
 Frame = -2

Query: 787  K*WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXX 611
            K +WA+A   A YLSN  P +++  + P E W+  K      + F    Y  VP      
Sbjct: 344  KEFWAEAVACAVYLSNRSPTKNVKDQTPQEAWSGVKPRVDHLRVFGSIAYAHVPDQGRFK 403

Query: 610  XXXXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEE------------DKVTNLK 467
                 +   FIGY + +KG++L +    K + +R++   EE            D     +
Sbjct: 404  LDDRSEKHVFIGYDASSKGYKLYNPNNGKTIVSRDVEFYEEGTWNWEEKEDTYDFFPYFE 463

Query: 466  DDQSECLNMNDPNHASTEDVTPIPTRNHITK-------RMPR*YKLMMEEAENFVNRKSI 308
            +   E L  ND    ST  ++P P+ N  +          PR     M   +   +   +
Sbjct: 464  EIDEEALTPND----STPALSPTPSTNEASSSSEGSSSERPR----RMRNIQELYDETEV 515

Query: 307  QANIYTKIDMYIPSTP---EKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSM 137
              +++    +++ S P   ++A     W++AM EE++ +++   W L  LPKG E IG  
Sbjct: 516  INDLFC---LFVDSKPLNFDEAMKDKRWRQAMEEEIKAIEKNNTWELSSLPKGHEAIGVK 572

Query: 136  WLFNIKLMTDESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
            W+F IK      ++++K+R+VAKGY +   +DY E F    +M T
Sbjct: 573  WVFKIKKNAKGEVERHKARLVAKGYKQQYEVDYDEVFAPVARMET 617


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  107 bits (266), Expect = 6e-21
 Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 16/276 (5%)
 Frame = -2

Query: 781  WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFY-LVPXXXXXXXX 605
            +WA++  TA YL N  P +++  + P E W  +K      + F    Y L+         
Sbjct: 467  FWAESVRTAVYLLNISPTKAVLNRTPYEAWCGRKPGVSHLRVFGSVCYSLIDAHNRKKLD 526

Query: 604  XXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVTNLKDDQSECLNM----- 440
               +   F+GY S +KG+RL +    KIV +RN+   EE   T  + D  E + +     
Sbjct: 527  EKSEKCIFLGYCSQSKGYRLYNPVSGKIVESRNVTFDEEAVWTWREGDNGELVEIFVNDE 586

Query: 439  --NDPNHASTEDVTPI------PTRNHITKRMPR*YKLMMEEAENFVNRKSI--QANIYT 290
               +P+ A++   TP       P  N+            +   + F + + I  + + + 
Sbjct: 587  QEENPSPANSATNTPASSAPSSPGPNNGNGSSDGEGSSSISPPQKFRSLREIYEEQHAFF 646

Query: 289  KIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMT 110
              D   P T  +A +   W++AM EE+  +++   W L ELP+ K +IG  W+F  K   
Sbjct: 647  SAD---PVTVNEAATKEEWRKAMEEEIASIEKNQTWQLVELPEEKHSIGVKWVFKTKYQA 703

Query: 109  DESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
            D+++ KYK+R+V KGY +  G+DY++TF+   +  T
Sbjct: 704  DDNIQKYKARLVVKGYAQEYGVDYEKTFSPVARFDT 739


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  107 bits (266), Expect = 6e-21
 Identities = 77/286 (26%), Positives = 132/286 (46%), Gaps = 24/286 (8%)
 Frame = -2

Query: 787  K*WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYLV-PXXXXXX 611
            K +WA+A  TA Y+ N  P  ++++K P E+W  K   Y S   F    Y++        
Sbjct: 607  KSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERTK 666

Query: 610  XXXXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVTNLKDD----QSECLN 443
                 +   F+GY  + KG+RL D    K+V +R++   E +  +  K+D    ++  + 
Sbjct: 667  LDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSKQKNDSTSKETAIVQ 726

Query: 442  MNDPNHAS-TEDVTPIPTRNHITKRMPR*YKLMMEEAENFVNRKSIQAN--------IYT 290
            M + +  S + +  P+                  ++  N V R + Q          + T
Sbjct: 727  MEEKSKESDSSEAEPVHEEQE------------PDDVNNGVRRSTRQTQKPSWQSDYVMT 774

Query: 289  KIDMYI-------PSTPEKAYS---ISHWKEAMLEELRRMKEK*VWALEELPKGKETIGS 140
              D Y        PST  +A +    S W  AM EE+  +     W L ELPKG++ IG+
Sbjct: 775  SHDAYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGN 834

Query: 139  MWLFNIKLMTDESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
             W++ IK   ++ +++Y++R+V KGY +  GID+ E F+  V++ T
Sbjct: 835  KWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTT 880


>emb|CAN70831.1| hypothetical protein VITISV_005284 [Vitis vinifera]
          Length = 973

 Score =  107 bits (266), Expect = 6e-21
 Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 18/280 (6%)
 Frame = -2

Query: 787  K*WWAKAAFTANYLSNYWPHRSLNMKRPSELWNN-----KKNLYFSPKSFW-KYFYLVPX 626
            K +W +A  TA Y+ N  P R L+ K P E+  +     K +   +P+ F    F  V  
Sbjct: 187  KSYWGEAILTATYMINRIPSRVLDNKSPVEILKSFYPHFKTSNGLTPRVFGCTAFVHVHN 246

Query: 625  XXXXXXXXXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVTNLKDDQSECL 446
                          F+GY S  KG++  +    K   + N+  +++    +  D  +E  
Sbjct: 247  QHRDKIDPRAIKCVFLGYSSTQKGYKCYNPSARKSYISANVIPEQKQVQESNSDLGNEIT 306

Query: 445  NMNDPNHASTEDVTPIPTRNHITKRMPR*YKLMMEEAEN--------FVNRKSIQA---N 299
               DP   +    T   + +++   +P   +    E  N        +V+ K +     N
Sbjct: 307  VRXDPPLHTQSGETSTNSIDNLDIDLPIXVRKGTRECTNRPLYPLSHYVSLKHLSPAHKN 366

Query: 298  IYTKIDM-YIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNI 122
                ++   IP+T  KA +   WK+AM EE+  +++   W + E PKGK  +   W+F +
Sbjct: 367  FIVSLNTTIIPNTVSKALTKKEWKDAMREEMSALEKNKTWEIVERPKGKNIVDCKWIFTL 426

Query: 121  KLMTDESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
            K  TD SL ++KSR+V KGY +  G++Y+ETF    KM T
Sbjct: 427  KYKTDRSLKRHKSRLVVKGYTQTYGVNYQETFAPVTKMNT 466


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  107 bits (266), Expect = 6e-21
 Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 33/295 (11%)
 Frame = -2

Query: 787  K*WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXX 611
            K +WA+A  TA Y+ N  P +++  + P E W  KK +    + F    Y  VP      
Sbjct: 643  KSFWAEAVNTAVYILNRSPTKAVTNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVK 702

Query: 610  XXXXXKVGKFIGYPSDTKGFRLLDTQENKIVPARN-IFDKEEDKVTNLKDDQSEC----- 449
                     F+GY    KG+RL + ++ KI+ +R+ IFD  E    N K  ++       
Sbjct: 703  FDNKSDRCIFVGYADGIKGYRLYNLEKKKIIISRDAIFD--ESATWNWKSPEASSTPLLP 760

Query: 448  ---LNMNDPNHAST---EDVTPIPTRNH--------------------ITKRMPR*YKLM 347
               + +  P+   T   ED TP P  +                       +  PR  + M
Sbjct: 761  TTTITLGQPHMHGTHEVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTPESAPRRVRSM 820

Query: 346  MEEAENFVNRKSIQANIYTKIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEEL 167
            +E  E+   ++  + + +    +  P + ++A    +W +AM +E+  +++   W L + 
Sbjct: 821  VELLESTSQQRGSEQHEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVDR 880

Query: 166  PKGKETIGSMWLFNIKLMTDESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
            P+ +E IG  W++  KL  D S+ KYK+R+VAKG+ +  GIDY ET+    ++ T
Sbjct: 881  PRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLET 935


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  106 bits (265), Expect = 8e-21
 Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 12/274 (4%)
 Frame = -2

Query: 787  K*WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYLV-PXXXXXX 611
            K +WA+AA TA Y+ N  P  ++++K P E+W  K   Y S   F    Y++        
Sbjct: 607  KSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQEKTK 666

Query: 610  XXXXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVTNLKDDQSECLNMNDP 431
                 +   F+GY  + KG+RL D    K+V +R++   E +  +  K+D +        
Sbjct: 667  LDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDSTSKETAIVQ 726

Query: 430  NHASTEDVTPIPTRNHITKRMPR*YKLMMEEAENFVNRKSIQAN-IYTKIDMYI------ 272
                +++       +   ++ P      +  +     + S Q++ + T  D Y       
Sbjct: 727  MEEKSKESDSSEAESVHEEQEPDDVNDGVRRSTRQTQKPSWQSDYVMTSHDAYCLITEEG 786

Query: 271  -PSTPEKAYS---ISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDE 104
             PST  +A +    S W  AM EE+  +     W L ELPKG++ IG+ W++ IK   ++
Sbjct: 787  EPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGND 846

Query: 103  SLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
             +++Y++R+V KGY +  GID+ E F+  V++ T
Sbjct: 847  QVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTT 880


>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
          Length = 1314

 Score =  106 bits (264), Expect = 1e-20
 Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 32/294 (10%)
 Frame = -2

Query: 787  K*WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXX 611
            K +WA+A  TA Y+ N  P +++  + P E W  KK +    + F    Y  VP      
Sbjct: 650  KSFWAEAVNTAVYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFACICYAQVPAQKRVK 709

Query: 610  XXXXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVTNLKDDQSEC------ 449
                     F+GY    KG+RL + ++ KI+ +R++F  +E    N K  ++        
Sbjct: 710  FDNKSNRCIFVGYADGIKGYRLYNLEKKKIIISRDVFF-DESATWNWKSPEASSTPLLPT 768

Query: 448  --LNMNDPNHAST---EDVTPIPTRNH--------------------ITKRMPR*YKLMM 344
              + +  P+   T   ED TP P  +                       +  PR  + M+
Sbjct: 769  TTITLGQPHMHGTHEVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTPESAPRRVRSMV 828

Query: 343  EEAENFVNRKSIQANIYTKIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELP 164
            E  E+   ++  + + +    +  P + ++A    +W +AM +E+  +++   W   + P
Sbjct: 829  ELLESTSQQRGSEQHEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWEFVDRP 888

Query: 163  KGKETIGSMWLFNIKLMTDESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
            + +E IG  W++  KL  D S+ KYK+R+VAKG+ +  GIDY ET+    ++ T
Sbjct: 889  RDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLET 942


>gb|EOY19976.1| Retrotransposon protein, unclassified, putative [Theobroma cacao]
          Length = 989

 Score =  105 bits (263), Expect = 1e-20
 Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 4/264 (1%)
 Frame = -2

Query: 781  WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXXXX 605
            +WA+A  TANYL N    R LN K P E+W   K      K+F    Y  VP        
Sbjct: 443  FWAEAVNTANYLLNITYTRVLNFKTPYEMWFACKPSAAHLKTFGCVCYAKVPDEKRSKLD 502

Query: 604  XXXKVGKFIGYPSDTKGFRLLDTQENKIVPAR-NIFDKEEDKVTNLKDDQSECLNMNDPN 428
                +  FIGY   +KG+ L + + NK+V +  + ++ E D  ++++D++          
Sbjct: 503  AKSVLDVFIGYSERSKGYSLYNVETNKVVTSNEDQYEAESDSFSDIEDEK---------- 552

Query: 427  HASTEDVTPIPTRNHITKRMPR*YKLMMEEAENFVNRKSIQANIYTKIDMYI--PSTPEK 254
                                            N V   S   +IY++  + +  PS+  +
Sbjct: 553  --------------------------------NAVRGTSTLQDIYSRCSLAMSKPSSFVE 580

Query: 253  AYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDESLDKYKSRIV 74
            A    +WK+AM  E++ +++   W L   P  +  IG  W+F IKL +D  ++KYK+R+V
Sbjct: 581  ANVDPNWKKAMNSEMKMIEKNNTWVLVNRPDNQHVIGLKWIFKIKLNSDGLVNKYKARLV 640

Query: 73   AKGYLKNVGIDYKETFTATVKMRT 2
             KGY +  G+DY ETF+   +  T
Sbjct: 641  VKGYAQVYGVDYNETFSLVARHDT 664


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  105 bits (263), Expect = 1e-20
 Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 17/276 (6%)
 Frame = -2

Query: 778 WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXXXXX 602
           WA+A   A YL N  P +S++ K P E W+ +K      + F    +  VP         
Sbjct: 153 WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDD 212

Query: 601 XXKVGKFIGYPSDTKGFRLLDTQENKIVPARNI-FDKEEDKVTN-----------LKDDQ 458
             +   FIGY +++KG++L +    K + +RNI FD+E +   N            ++D+
Sbjct: 213 KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDK 272

Query: 457 SECLNMNDPNHASTEDVTPIPTRNHI----TKRMPR*YKLMMEEAENFVNRKSIQANIYT 290
            E      P+   T   T  PT + I    ++R PR ++ + E  E   N++++   ++ 
Sbjct: 273 PEPTREEPPSEEPTTPPTS-PTSSQIEESSSERTPR-FRSIQELYEVTENQENL--TLFC 328

Query: 289 KIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMT 110
                 P   ++A     W+ AM EE++ +++   W L  LP G + IG  W++  K  +
Sbjct: 329 LFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNS 388

Query: 109 DESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
              +++YK+R+VAKGY +  GIDY E F    ++ T
Sbjct: 389 KGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLET 424


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  105 bits (263), Expect = 1e-20
 Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 17/276 (6%)
 Frame = -2

Query: 778  WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXXXXX 602
            WA+A   A YL N  P +S++ K P E W+ +K      + F    +  VP         
Sbjct: 656  WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDD 715

Query: 601  XXKVGKFIGYPSDTKGFRLLDTQENKIVPARNI-FDKEEDKVTN-----------LKDDQ 458
              +   FIGY +++KG++L +    K + +RNI FD+E +   N            ++D+
Sbjct: 716  KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDK 775

Query: 457  SECLNMNDPNHASTEDVTPIPTRNHI----TKRMPR*YKLMMEEAENFVNRKSIQANIYT 290
             E      P+   T   T  PT + I    ++R PR ++ + E  E   N++++   ++ 
Sbjct: 776  PEPTREEPPSEEPTTPPTS-PTSSQIEESSSERTPR-FRSIQELYEVTENQENL--TLFC 831

Query: 289  KIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMT 110
                  P   ++A     W+ AM EE++ +++   W L  LP G + IG  W++  K  +
Sbjct: 832  LFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNS 891

Query: 109  DESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
               +++YK+R+VAKGY +  GIDY E F    ++ T
Sbjct: 892  KGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLET 927


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