BLASTX nr result
ID: Ephedra25_contig00026557
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00026557
(794 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera] 117 5e-24
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 114 3e-23
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 111 3e-22
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 110 4e-22
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 109 1e-21
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 109 1e-21
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 108 3e-21
ref|XP_003382107.1| retrovirus-related Pol polyprotein from tran... 108 3e-21
ref|XP_003375245.1| putative integrase core domain protein [Tric... 107 5e-21
ref|XP_003370196.1| putative integrase core domain protein [Tric... 107 5e-21
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 107 5e-21
gb|ABW74566.1| integrase [Boechera divaricarpa] 107 6e-21
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 107 6e-21
emb|CAN70831.1| hypothetical protein VITISV_005284 [Vitis vinifera] 107 6e-21
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 107 6e-21
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 106 8e-21
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group] 106 1e-20
gb|EOY19976.1| Retrotransposon protein, unclassified, putative [... 105 1e-20
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana] 105 1e-20
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 105 1e-20
>emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]
Length = 894
Score = 117 bits (293), Expect = 5e-24
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 5/265 (1%)
Frame = -2
Query: 781 WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKY-FYLVPXXXXXXXX 605
+WA+A T+ YL N P +SL K P E W K K F +Y VP
Sbjct: 218 FWAEAVNTSVYLLNRLPTKSLKNKTPYEEWYGVKPFVNHLKIFGSICYYHVPEPKRSKLD 277
Query: 604 XXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVT----NLKDDQSECLNMN 437
+ G IGY + TKG+R+ Q NK+V +RN+ K ++ T N K QS+ N
Sbjct: 278 SRAQKGILIGYGTSTKGYRIFCLQTNKVVLSRNV--KVDEMATWDCKNKKYAQSDVDFNN 335
Query: 436 DPNHASTEDVTPIPTRNHITKRMPR*YKLMMEEAENFVNRKSIQANIYTKIDMYIPSTPE 257
+ +++ V P R + E+ R S+ T+ Y+ +
Sbjct: 336 HEDFQTSKSVDDFPVRG-------------IRSLEDIYQRCSLAI---TEPTSYVEAKDS 379
Query: 256 KAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDESLDKYKSRI 77
+A W+ AM EEL+ + + W L E PK + IG W+F KL +D S+ K+K+++
Sbjct: 380 EA-----WRRAMQEELKMINKNETWQLVERPKNHKVIGVKWVFKTKLNSDGSICKHKAKL 434
Query: 76 VAKGYLKNVGIDYKETFTATVKMRT 2
V KGY + G+DYKETF + T
Sbjct: 435 VVKGYAQQYGVDYKETFAPVARYDT 459
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 114 bits (286), Expect = 3e-23
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 12/272 (4%)
Frame = -2
Query: 781 WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYLVPXXXXXXXXX 602
+WA+ TA YL N P +++ + P E W +K K F Y +
Sbjct: 737 FWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLXBSHNRSKLD 796
Query: 601 XXKVGK-FIGYPSDTKGFRLLDTQENKIVPARNI-FDKEEDKVTNLKDDQSECLNMNDPN 428
V FIGY S +KG++L + KI+ +RN+ FD++ + +D + ++
Sbjct: 797 EKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASXTWRVSEDGALVEISSESE 856
Query: 427 HASTEDVTPI------PTRNHITKRMPR*YKLMMEEAENFVNRK--SIQANIYTKIDMYI 272
A +ED P PT +H + +E RK S++ T +++
Sbjct: 857 MAQSEDQQPSVQIPXSPTPSHSPSSPNLSXSSSSQSSEETPPRKFRSLRDIYETTQVLFV 916
Query: 271 --PSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDESL 98
P+T E+A W AM EE+ +++ W L ELP+ K IG W+F K + D S+
Sbjct: 917 ADPTTFEEAVEKEEWCSAMKEEIAAIEKNETWELVELPEDKNVIGVKWVFRTKYLADGSI 976
Query: 97 DKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
K+K+R+VAKGY + G+DY +TF+ + T
Sbjct: 977 QKHKARLVAKGYAQQHGVDYDDTFSPVARFET 1008
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 111 bits (277), Expect = 3e-22
Identities = 78/276 (28%), Positives = 135/276 (48%), Gaps = 17/276 (6%)
Frame = -2
Query: 778 WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXXXXX 602
WA+A A YL N P +S++ K P E W+ +K+ + F + VP
Sbjct: 656 WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDD 715
Query: 601 XXKVGKFIGYPSDTKGFRLLDTQENKIVPARNI-FDKEEDKVTN-----------LKDDQ 458
+ FIGY +++KG++L + K + +RNI FD+E + N ++D+
Sbjct: 716 KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDE 775
Query: 457 SECLNMNDPNHASTEDVTPIPTRNHI----TKRMPR*YKLMMEEAENFVNRKSIQANIYT 290
E P+ T T PT + I ++R PR ++ + E E N++++ ++
Sbjct: 776 PEPTREEPPSEEPTTPPTS-PTSSQIEESSSERTPR-FRSIQELYEVTENQENL--TLFC 831
Query: 289 KIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMT 110
P ++A W+ AM EE++ +++ W L LP G +TIG W++ K +
Sbjct: 832 LFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNS 891
Query: 109 DESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
+++YK+R+VAKGY++ GIDY E F ++ T
Sbjct: 892 KGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLET 927
>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 110 bits (276), Expect = 4e-22
Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 12/272 (4%)
Frame = -2
Query: 781 WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFY-LVPXXXXXXXX 605
+WA+ TA YL N P +++ + P E W +K K F Y L+
Sbjct: 626 FWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLIDSHNHSNLD 685
Query: 604 XXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVT-NLKDDQSECLNMNDPN 428
FIGY S +KG++L + KI+ +RN+ E+ T + +D + ++
Sbjct: 686 EKSIKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVXDEKASWTWRVSEDGALVEISSESE 745
Query: 427 HASTEDVTP------IPTRNHITKRMPR*YKLMMEEAENFVNRK--SIQANIYTKIDMYI 272
A +ED P PT +H + +E RK S++ T +++
Sbjct: 746 VAQSEDQQPSVQIPAXPTPSHSPSSPNLSSSSSSQSSEETPPRKFRSLRDIYETTQVLFV 805
Query: 271 --PSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDESL 98
P+T E+A W AM EE+ +++ W L ELP+ K IG W+F K + D S+
Sbjct: 806 ADPTTFEEAVEKEEWCSAMKEEIVAIEKNETWELVELPEDKNVIGVKWVFRTKYLADGSI 865
Query: 97 DKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
K+K+R+VAKGY + G+DY +TF+ + T
Sbjct: 866 QKHKARLVAKGYAQQHGVDYDDTFSPVARFET 897
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 109 bits (273), Expect = 1e-21
Identities = 79/276 (28%), Positives = 133/276 (48%), Gaps = 17/276 (6%)
Frame = -2
Query: 778 WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXXXXX 602
WA+A A YL N P +S++ K P E W+ +K + F + VP
Sbjct: 656 WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDD 715
Query: 601 XXKVGKFIGYPSDTKGFRLLDTQENKIVPARNI-FDKEEDKVTN-----------LKDDQ 458
+ FIGY +++KG++L + K + +RNI FD+E + N ++D+
Sbjct: 716 KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDE 775
Query: 457 SECLNMNDPNHASTEDVTPIPTRNHI----TKRMPR*YKLMMEEAENFVNRKSIQANIYT 290
E P+ T T PT + I ++R PR ++ + E E N++++ ++
Sbjct: 776 PEPTREEPPSEEPTTPPTS-PTSSQIEESSSERTPR-FRSIQELYEVTENQENL--TLFC 831
Query: 289 KIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMT 110
P +KA W+ AM EE++ +++ W L LP G + IG W++ K +
Sbjct: 832 LFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNS 891
Query: 109 DESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
+++YK+R+VAKGY + VGIDY E F ++ T
Sbjct: 892 KGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLET 927
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 109 bits (273), Expect = 1e-21
Identities = 79/276 (28%), Positives = 133/276 (48%), Gaps = 17/276 (6%)
Frame = -2
Query: 778 WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXXXXX 602
WA+A A YL N P +S++ K P E W+ +K + F + VP
Sbjct: 656 WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDD 715
Query: 601 XXKVGKFIGYPSDTKGFRLLDTQENKIVPARNI-FDKEEDKVTN-----------LKDDQ 458
+ FIGY +++KG++L + K + +RNI FD+E + N ++D+
Sbjct: 716 KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDE 775
Query: 457 SECLNMNDPNHASTEDVTPIPTRNHI----TKRMPR*YKLMMEEAENFVNRKSIQANIYT 290
E P+ T T PT + I ++R PR ++ + E E N++++ ++
Sbjct: 776 PEPTREEPPSEEPTTPPTS-PTSSQIEESSSERTPR-FRSIQELYEVTENQENL--TLFC 831
Query: 289 KIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMT 110
P +KA W+ AM EE++ +++ W L LP G + IG W++ K +
Sbjct: 832 LFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNS 891
Query: 109 DESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
+++YK+R+VAKGY + VGIDY E F ++ T
Sbjct: 892 KGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLET 927
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 108 bits (269), Expect = 3e-21
Identities = 79/290 (27%), Positives = 136/290 (46%), Gaps = 28/290 (9%)
Frame = -2
Query: 787 K*WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFY-LVPXXXXXX 611
K +WA+A TA YL N P ++ +K P E+W K Y + F Y +
Sbjct: 597 KSFWAEAVNTACYLVNRAPSTAIELKTPMEMWTGKPVDYSNLHIFGSIVYAMYNAQEITK 656
Query: 610 XXXXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIF---------------DKEEDKVT 476
+ +F+GY KG+RL D +K+V +R++ +KE+ + T
Sbjct: 657 LDPKSRKCRFLGYADGVKGYRLWDPTAHKVVISRDVIFVEDRLQRGEVDDSTEKEKPETT 716
Query: 475 NLK------DDQSECLNMNDPNHASTEDVT---PIPTRNHITKRMPR*YKLMMEEAENFV 323
++ D SE +P H E + P ++ KR P + ++V
Sbjct: 717 QIQVEEEFEQDSSEA----EPAHEEPEPESSGAPTTRQSDREKRRPTWHS-------DYV 765
Query: 322 NRKSIQANIYTKIDMYIPSTPEKAYS---ISHWKEAMLEELRRMKEK*VWALEELPKGKE 152
++ + T+ PST ++A + +S W AM EE+ + + W L LP+G++
Sbjct: 766 MEGNVAYCLLTEDGE--PSTFQEAINSSDVSQWTAAMQEEIEALHKNNTWDLVPLPQGRK 823
Query: 151 TIGSMWLFNIKLMTDESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
IG+ W+F IK D+ +++Y++R+V KGY + GID+ E F+ V++ T
Sbjct: 824 PIGNKWVFKIKRNGDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTT 873
>ref|XP_003382107.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trichinella spiralis] gi|316978962|gb|EFV61839.1|
retrovirus-related Pol polyprotein from transposon TNT
1-94 [Trichinella spiralis]
Length = 567
Score = 108 bits (269), Expect = 3e-21
Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 15/274 (5%)
Frame = -2
Query: 778 WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFW--KYFYLVPXXXXXXXX 605
WA+A TA Y+ N ++ K P ELW + + + + F VP
Sbjct: 159 WAEAVNTACYVLNRTGPTTVKGKSPIELWFKRDPVSIDHFHVFGTECFVHVPKQRRRKWE 218
Query: 604 XXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEED----KVTNLKDDQSECLNMN 437
G+F+GY + G+R+ N+IV +R+I K E+ ++K D SE
Sbjct: 219 KKSVAGRFMGYCDEKDGYRIWLPDINQIVTSRDILFKPEEIRLSSKMSVKADSSEKNEEE 278
Query: 436 DPNHASTEDVTPIPTRNHITKRMPR*YKLMMEEAENFVNRKSIQA--NIYTKIDMYIPST 263
D A E++ +K + ME+ E+ ++ K ++ N + + + +
Sbjct: 279 DDPDA--EELRLELNSQWTSKEAECEVETKMEQEEDALSSKRVRKMPNYLSDYVLTVQTP 336
Query: 262 PEKAY-------SISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDE 104
P ++ + W++AM EEL ++E VW L + P GK+ + S W+ IK D
Sbjct: 337 PPSSFHEAMQSVDAADWRKAMEEELHSLEENSVWTLVDPPSGKKVLDSRWVLRIKTKADR 396
Query: 103 SLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
S+ +YK+R+VAKGY++ GIDY ETF+ + T
Sbjct: 397 SVARYKARLVAKGYMQRPGIDYDETFSPVARFDT 430
>ref|XP_003375245.1| putative integrase core domain protein [Trichinella spiralis]
gi|316971451|gb|EFV55218.1| putative integrase core
domain protein [Trichinella spiralis]
Length = 1249
Score = 107 bits (267), Expect = 5e-21
Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 15/274 (5%)
Frame = -2
Query: 778 WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFW--KYFYLVPXXXXXXXX 605
WA+A TA Y+ N ++ K P ELW + + + + F VP
Sbjct: 560 WAEAVNTACYVLNRTGPTTVKGKSPIELWFKRDPVSIDHFHVFGTECFVHVPKQRRRKWE 619
Query: 604 XXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEED----KVTNLKDDQSECLNMN 437
G+F+GY + G+R+ N+IV +R+I K E+ ++K D SE
Sbjct: 620 KKSVAGRFMGYCDEKDGYRIWLPDINQIVTSRDILFKPEEIRLSSKMSVKADSSEKNEEE 679
Query: 436 DPNHASTEDVTPIPTRNHITKRMPR*YKLMMEEAENFVNRKSIQA--NIYTKIDMYIPST 263
D A E++ +K + ME+ E+ ++ K ++ N + + + +
Sbjct: 680 DDPDA--EELRLELNSQWTSKEAECEVETKMEQEEDALSSKRVRKMPNYLSDYVLTVQTP 737
Query: 262 PEKAY-------SISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDE 104
P ++ + W++AM EEL ++E VW L + P GK+ + S W+ IK D
Sbjct: 738 PPSSFHEAMQSVDAADWRKAMEEELHSLEENSVWTLVDPPSGKKVLDSRWVLRIKTKADG 797
Query: 103 SLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
S+ +YK+R+VAKGY++ GIDY ETF+ + T
Sbjct: 798 SVARYKARLVAKGYMQRPGIDYDETFSPVARFDT 831
>ref|XP_003370196.1| putative integrase core domain protein [Trichinella spiralis]
gi|316964977|gb|EFV49847.1| putative integrase core
domain protein [Trichinella spiralis]
Length = 1249
Score = 107 bits (267), Expect = 5e-21
Identities = 77/274 (28%), Positives = 130/274 (47%), Gaps = 15/274 (5%)
Frame = -2
Query: 778 WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFW--KYFYLVPXXXXXXXX 605
WA+A TA Y+ N ++ K P ELW + + + + F VP
Sbjct: 560 WAEAVNTACYVLNRTGPTTVKGKSPIELWFKRDPVSIDHFHVFGTECFVHVPKQRRRKWE 619
Query: 604 XXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVTN----LKDDQSECLNMN 437
G+F+GY + G+R+ N+IV +R+I K E+ + + +K D SE
Sbjct: 620 KKSVAGRFMGYCDEKDGYRIWLPDINQIVTSRDILFKPEEILLSSKMSVKADSSEKNEEE 679
Query: 436 DPNHASTEDVTPIPTRNHITKRMPR*YKLMMEEAENFVNRKSIQA--NIYTKIDMYIPST 263
D A E++ +K + ME+ E+ ++ K ++ N + + + +
Sbjct: 680 DDPDA--EELRLELNSQWTSKEAECEVETKMEQEEDALSSKRVRKMPNYLSDYVLTVQTP 737
Query: 262 PEKAY-------SISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDE 104
P ++ + W++AM EEL ++E VW L + P GK+ + S W+ IK D
Sbjct: 738 PPSSFHEAMQSVDAADWRKAMEEELHSLEENSVWTLVDPPSGKKVLDSRWVLRIKTKADG 797
Query: 103 SLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
S+ +YK+R+VAKGY++ GIDY ETF+ + T
Sbjct: 798 SVARYKARLVAKGYMQRPGIDYDETFSPVARFDT 831
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 107 bits (267), Expect = 5e-21
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 23/285 (8%)
Frame = -2
Query: 787 K*WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXX 611
K +WA+A A YLSN P +++ + P E W+ K + F Y VP
Sbjct: 344 KEFWAEAVACAVYLSNRSPTKNVKDQTPQEAWSGVKPRVDHLRVFGSIAYAHVPDQGRFK 403
Query: 610 XXXXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEE------------DKVTNLK 467
+ FIGY + +KG++L + K + +R++ EE D +
Sbjct: 404 LDDRSEKHVFIGYDASSKGYKLYNPNNGKTIVSRDVEFYEEGTWNWEEKEDTYDFFPYFE 463
Query: 466 DDQSECLNMNDPNHASTEDVTPIPTRNHITK-------RMPR*YKLMMEEAENFVNRKSI 308
+ E L ND ST ++P P+ N + PR M + + +
Sbjct: 464 EIDEEALTPND----STPALSPTPSTNEASSSSEGSSSERPR----RMRNIQELYDETEV 515
Query: 307 QANIYTKIDMYIPSTP---EKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSM 137
+++ +++ S P ++A W++AM EE++ +++ W L LPKG E IG
Sbjct: 516 INDLFC---LFVDSKPLNFDEAMKDKRWRQAMEEEIKAIEKNNTWELSSLPKGHEAIGVK 572
Query: 136 WLFNIKLMTDESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
W+F IK ++++K+R+VAKGY + +DY E F +M T
Sbjct: 573 WVFKIKKNAKGEVERHKARLVAKGYKQQYEVDYDEVFAPVARMET 617
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 107 bits (266), Expect = 6e-21
Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 16/276 (5%)
Frame = -2
Query: 781 WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFY-LVPXXXXXXXX 605
+WA++ TA YL N P +++ + P E W +K + F Y L+
Sbjct: 467 FWAESVRTAVYLLNISPTKAVLNRTPYEAWCGRKPGVSHLRVFGSVCYSLIDAHNRKKLD 526
Query: 604 XXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVTNLKDDQSECLNM----- 440
+ F+GY S +KG+RL + KIV +RN+ EE T + D E + +
Sbjct: 527 EKSEKCIFLGYCSQSKGYRLYNPVSGKIVESRNVTFDEEAVWTWREGDNGELVEIFVNDE 586
Query: 439 --NDPNHASTEDVTPI------PTRNHITKRMPR*YKLMMEEAENFVNRKSI--QANIYT 290
+P+ A++ TP P N+ + + F + + I + + +
Sbjct: 587 QEENPSPANSATNTPASSAPSSPGPNNGNGSSDGEGSSSISPPQKFRSLREIYEEQHAFF 646
Query: 289 KIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMT 110
D P T +A + W++AM EE+ +++ W L ELP+ K +IG W+F K
Sbjct: 647 SAD---PVTVNEAATKEEWRKAMEEEIASIEKNQTWQLVELPEEKHSIGVKWVFKTKYQA 703
Query: 109 DESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
D+++ KYK+R+V KGY + G+DY++TF+ + T
Sbjct: 704 DDNIQKYKARLVVKGYAQEYGVDYEKTFSPVARFDT 739
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 107 bits (266), Expect = 6e-21
Identities = 77/286 (26%), Positives = 132/286 (46%), Gaps = 24/286 (8%)
Frame = -2
Query: 787 K*WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYLV-PXXXXXX 611
K +WA+A TA Y+ N P ++++K P E+W K Y S F Y++
Sbjct: 607 KSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERTK 666
Query: 610 XXXXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVTNLKDD----QSECLN 443
+ F+GY + KG+RL D K+V +R++ E + + K+D ++ +
Sbjct: 667 LDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSKQKNDSTSKETAIVQ 726
Query: 442 MNDPNHAS-TEDVTPIPTRNHITKRMPR*YKLMMEEAENFVNRKSIQAN--------IYT 290
M + + S + + P+ ++ N V R + Q + T
Sbjct: 727 MEEKSKESDSSEAEPVHEEQE------------PDDVNNGVRRSTRQTQKPSWQSDYVMT 774
Query: 289 KIDMYI-------PSTPEKAYS---ISHWKEAMLEELRRMKEK*VWALEELPKGKETIGS 140
D Y PST +A + S W AM EE+ + W L ELPKG++ IG+
Sbjct: 775 SHDAYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGN 834
Query: 139 MWLFNIKLMTDESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
W++ IK ++ +++Y++R+V KGY + GID+ E F+ V++ T
Sbjct: 835 KWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTT 880
>emb|CAN70831.1| hypothetical protein VITISV_005284 [Vitis vinifera]
Length = 973
Score = 107 bits (266), Expect = 6e-21
Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 18/280 (6%)
Frame = -2
Query: 787 K*WWAKAAFTANYLSNYWPHRSLNMKRPSELWNN-----KKNLYFSPKSFW-KYFYLVPX 626
K +W +A TA Y+ N P R L+ K P E+ + K + +P+ F F V
Sbjct: 187 KSYWGEAILTATYMINRIPSRVLDNKSPVEILKSFYPHFKTSNGLTPRVFGCTAFVHVHN 246
Query: 625 XXXXXXXXXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVTNLKDDQSECL 446
F+GY S KG++ + K + N+ +++ + D +E
Sbjct: 247 QHRDKIDPRAIKCVFLGYSSTQKGYKCYNPSARKSYISANVIPEQKQVQESNSDLGNEIT 306
Query: 445 NMNDPNHASTEDVTPIPTRNHITKRMPR*YKLMMEEAEN--------FVNRKSIQA---N 299
DP + T + +++ +P + E N +V+ K + N
Sbjct: 307 VRXDPPLHTQSGETSTNSIDNLDIDLPIXVRKGTRECTNRPLYPLSHYVSLKHLSPAHKN 366
Query: 298 IYTKIDM-YIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNI 122
++ IP+T KA + WK+AM EE+ +++ W + E PKGK + W+F +
Sbjct: 367 FIVSLNTTIIPNTVSKALTKKEWKDAMREEMSALEKNKTWEIVERPKGKNIVDCKWIFTL 426
Query: 121 KLMTDESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
K TD SL ++KSR+V KGY + G++Y+ETF KM T
Sbjct: 427 KYKTDRSLKRHKSRLVVKGYTQTYGVNYQETFAPVTKMNT 466
>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711922|gb|ABF99717.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1335
Score = 107 bits (266), Expect = 6e-21
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 33/295 (11%)
Frame = -2
Query: 787 K*WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXX 611
K +WA+A TA Y+ N P +++ + P E W KK + + F Y VP
Sbjct: 643 KSFWAEAVNTAVYILNRSPTKAVTNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVK 702
Query: 610 XXXXXKVGKFIGYPSDTKGFRLLDTQENKIVPARN-IFDKEEDKVTNLKDDQSEC----- 449
F+GY KG+RL + ++ KI+ +R+ IFD E N K ++
Sbjct: 703 FDNKSDRCIFVGYADGIKGYRLYNLEKKKIIISRDAIFD--ESATWNWKSPEASSTPLLP 760
Query: 448 ---LNMNDPNHAST---EDVTPIPTRNH--------------------ITKRMPR*YKLM 347
+ + P+ T ED TP P + + PR + M
Sbjct: 761 TTTITLGQPHMHGTHEVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTPESAPRRVRSM 820
Query: 346 MEEAENFVNRKSIQANIYTKIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEEL 167
+E E+ ++ + + + + P + ++A +W +AM +E+ +++ W L +
Sbjct: 821 VELLESTSQQRGSEQHEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVDR 880
Query: 166 PKGKETIGSMWLFNIKLMTDESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
P+ +E IG W++ KL D S+ KYK+R+VAKG+ + GIDY ET+ ++ T
Sbjct: 881 PRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLET 935
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 106 bits (265), Expect = 8e-21
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 12/274 (4%)
Frame = -2
Query: 787 K*WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYLV-PXXXXXX 611
K +WA+AA TA Y+ N P ++++K P E+W K Y S F Y++
Sbjct: 607 KSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQEKTK 666
Query: 610 XXXXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVTNLKDDQSECLNMNDP 431
+ F+GY + KG+RL D K+V +R++ E + + K+D +
Sbjct: 667 LDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDSTSKETAIVQ 726
Query: 430 NHASTEDVTPIPTRNHITKRMPR*YKLMMEEAENFVNRKSIQAN-IYTKIDMYI------ 272
+++ + ++ P + + + S Q++ + T D Y
Sbjct: 727 MEEKSKESDSSEAESVHEEQEPDDVNDGVRRSTRQTQKPSWQSDYVMTSHDAYCLITEEG 786
Query: 271 -PSTPEKAYS---ISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDE 104
PST +A + S W AM EE+ + W L ELPKG++ IG+ W++ IK ++
Sbjct: 787 EPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGND 846
Query: 103 SLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
+++Y++R+V KGY + GID+ E F+ V++ T
Sbjct: 847 QVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTT 880
>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
Length = 1314
Score = 106 bits (264), Expect = 1e-20
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 32/294 (10%)
Frame = -2
Query: 787 K*WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXX 611
K +WA+A TA Y+ N P +++ + P E W KK + + F Y VP
Sbjct: 650 KSFWAEAVNTAVYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFACICYAQVPAQKRVK 709
Query: 610 XXXXXKVGKFIGYPSDTKGFRLLDTQENKIVPARNIFDKEEDKVTNLKDDQSEC------ 449
F+GY KG+RL + ++ KI+ +R++F +E N K ++
Sbjct: 710 FDNKSNRCIFVGYADGIKGYRLYNLEKKKIIISRDVFF-DESATWNWKSPEASSTPLLPT 768
Query: 448 --LNMNDPNHAST---EDVTPIPTRNH--------------------ITKRMPR*YKLMM 344
+ + P+ T ED TP P + + PR + M+
Sbjct: 769 TTITLGQPHMHGTHEVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTPESAPRRVRSMV 828
Query: 343 EEAENFVNRKSIQANIYTKIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELP 164
E E+ ++ + + + + P + ++A +W +AM +E+ +++ W + P
Sbjct: 829 ELLESTSQQRGSEQHEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWEFVDRP 888
Query: 163 KGKETIGSMWLFNIKLMTDESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
+ +E IG W++ KL D S+ KYK+R+VAKG+ + GIDY ET+ ++ T
Sbjct: 889 RDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLET 942
>gb|EOY19976.1| Retrotransposon protein, unclassified, putative [Theobroma cacao]
Length = 989
Score = 105 bits (263), Expect = 1e-20
Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 4/264 (1%)
Frame = -2
Query: 781 WWAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXXXX 605
+WA+A TANYL N R LN K P E+W K K+F Y VP
Sbjct: 443 FWAEAVNTANYLLNITYTRVLNFKTPYEMWFACKPSAAHLKTFGCVCYAKVPDEKRSKLD 502
Query: 604 XXXKVGKFIGYPSDTKGFRLLDTQENKIVPAR-NIFDKEEDKVTNLKDDQSECLNMNDPN 428
+ FIGY +KG+ L + + NK+V + + ++ E D ++++D++
Sbjct: 503 AKSVLDVFIGYSERSKGYSLYNVETNKVVTSNEDQYEAESDSFSDIEDEK---------- 552
Query: 427 HASTEDVTPIPTRNHITKRMPR*YKLMMEEAENFVNRKSIQANIYTKIDMYI--PSTPEK 254
N V S +IY++ + + PS+ +
Sbjct: 553 --------------------------------NAVRGTSTLQDIYSRCSLAMSKPSSFVE 580
Query: 253 AYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMTDESLDKYKSRIV 74
A +WK+AM E++ +++ W L P + IG W+F IKL +D ++KYK+R+V
Sbjct: 581 ANVDPNWKKAMNSEMKMIEKNNTWVLVNRPDNQHVIGLKWIFKIKLNSDGLVNKYKARLV 640
Query: 73 AKGYLKNVGIDYKETFTATVKMRT 2
KGY + G+DY ETF+ + T
Sbjct: 641 VKGYAQVYGVDYNETFSLVARHDT 664
>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
Length = 623
Score = 105 bits (263), Expect = 1e-20
Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 17/276 (6%)
Frame = -2
Query: 778 WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXXXXX 602
WA+A A YL N P +S++ K P E W+ +K + F + VP
Sbjct: 153 WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDD 212
Query: 601 XXKVGKFIGYPSDTKGFRLLDTQENKIVPARNI-FDKEEDKVTN-----------LKDDQ 458
+ FIGY +++KG++L + K + +RNI FD+E + N ++D+
Sbjct: 213 KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDK 272
Query: 457 SECLNMNDPNHASTEDVTPIPTRNHI----TKRMPR*YKLMMEEAENFVNRKSIQANIYT 290
E P+ T T PT + I ++R PR ++ + E E N++++ ++
Sbjct: 273 PEPTREEPPSEEPTTPPTS-PTSSQIEESSSERTPR-FRSIQELYEVTENQENL--TLFC 328
Query: 289 KIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMT 110
P ++A W+ AM EE++ +++ W L LP G + IG W++ K +
Sbjct: 329 LFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNS 388
Query: 109 DESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
+++YK+R+VAKGY + GIDY E F ++ T
Sbjct: 389 KGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLET 424
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 105 bits (263), Expect = 1e-20
Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 17/276 (6%)
Frame = -2
Query: 778 WAKAAFTANYLSNYWPHRSLNMKRPSELWNNKKNLYFSPKSFWKYFYL-VPXXXXXXXXX 602
WA+A A YL N P +S++ K P E W+ +K + F + VP
Sbjct: 656 WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDD 715
Query: 601 XXKVGKFIGYPSDTKGFRLLDTQENKIVPARNI-FDKEEDKVTN-----------LKDDQ 458
+ FIGY +++KG++L + K + +RNI FD+E + N ++D+
Sbjct: 716 KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDK 775
Query: 457 SECLNMNDPNHASTEDVTPIPTRNHI----TKRMPR*YKLMMEEAENFVNRKSIQANIYT 290
E P+ T T PT + I ++R PR ++ + E E N++++ ++
Sbjct: 776 PEPTREEPPSEEPTTPPTS-PTSSQIEESSSERTPR-FRSIQELYEVTENQENL--TLFC 831
Query: 289 KIDMYIPSTPEKAYSISHWKEAMLEELRRMKEK*VWALEELPKGKETIGSMWLFNIKLMT 110
P ++A W+ AM EE++ +++ W L LP G + IG W++ K +
Sbjct: 832 LFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNS 891
Query: 109 DESLDKYKSRIVAKGYLKNVGIDYKETFTATVKMRT 2
+++YK+R+VAKGY + GIDY E F ++ T
Sbjct: 892 KGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLET 927