BLASTX nr result
ID: Ephedra25_contig00025455
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00025455
(539 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006845708.1| hypothetical protein AMTR_s00019p00240430 [A... 133 2e-29
ref|XP_006280485.1| hypothetical protein CARUB_v10026422mg [Caps... 109 4e-22
ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arab... 106 4e-21
ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana] gi|75328911... 105 9e-21
gb|AAM61481.1| unknown [Arabidopsis thaliana] 105 9e-21
ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|33200777... 103 2e-20
gb|EXB42196.1| hypothetical protein L484_001276 [Morus notabilis] 102 6e-20
ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495... 101 1e-19
ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus c... 101 1e-19
ref|XP_006398112.1| hypothetical protein EUTSA_v10000889mg [Eutr... 99 5e-19
ref|XP_001703164.1| chloroplast-targeted RNA-binding protein [Ch... 94 3e-17
ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidop... 93 4e-17
dbj|BAC42861.1| unknown protein [Arabidopsis thaliana] 93 4e-17
ref|NP_567593.1| plastid transcriptionally active 9 [Arabidopsis... 93 4e-17
ref|XP_006282647.1| hypothetical protein CARUB_v10004988mg, part... 92 6e-17
ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arab... 92 6e-17
gb|ESW24981.1| hypothetical protein PHAVU_004G177000g [Phaseolus... 91 2e-16
ref|XP_006413910.1| hypothetical protein EUTSA_v10025547mg [Eutr... 90 3e-16
gb|EOX96863.1| Plastid transcriptionally active 9, putative [The... 89 6e-16
ref|XP_002330744.1| predicted protein [Populus trichocarpa] 88 1e-15
>ref|XP_006845708.1| hypothetical protein AMTR_s00019p00240430 [Amborella trichopoda]
gi|548848280|gb|ERN07383.1| hypothetical protein
AMTR_s00019p00240430 [Amborella trichopoda]
Length = 500
Score = 133 bits (335), Expect = 2e-29
Identities = 72/172 (41%), Positives = 96/172 (55%), Gaps = 8/172 (4%)
Frame = +1
Query: 46 ENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLRYEA 225
E W L P W + R +K+ P +PDF +K ++EALW+D K+TP+ V+ L + A
Sbjct: 227 EGLWKELFAKPYNWYDNRFDKRNPRYPDFRNKNSKEALWLD-KHTPDSVLSALESPEFCA 285
Query: 226 -FASSVLVEDL-------WISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAET 381
FA+ +E + W FAD SKW D RK K HPDF HK+T EALW+D +
Sbjct: 286 KFANGQKIEKIRADIGHRWEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGPK- 344
Query: 382 PAWATLMLNNLQTEGFAPSTSTENLWKDLFADPSKWLDNRNTKESIKYPDFK 537
A +L+ L+T +LW+DLFADPSKW DNR K +PDFK
Sbjct: 345 ---AEWVLSKLKTLEIDQRQDKGHLWEDLFADPSKWCDNRKVKTQPTHPDFK 393
Score = 130 bits (328), Expect = 1e-28
Identities = 70/161 (43%), Positives = 86/161 (53%)
Frame = +1
Query: 55 WISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLRYEAFAS 234
W L PSKW + R+ K P PDF HKE EALW+D WV+ KL L +
Sbjct: 304 WEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGPKA-EWVLSKLKTLEIDQRQD 362
Query: 235 SVLVEDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAETPAWATLMLNNL 414
LW FAD SKW D RK K HPDF HK+T EALW+D + P W L L
Sbjct: 363 K---GHLWEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGIK-PEWVLSKLKTL 418
Query: 415 QTEGFAPSTSTENLWKDLFADPSKWLDNRNTKESIKYPDFK 537
+ + + + +LWKDL A+ KW DNR +K + K PDFK
Sbjct: 419 EIDQ-RQNKDSNDLWKDLVANRDKWWDNRLSKVNPKAPDFK 458
Score = 95.9 bits (237), Expect = 5e-18
Identities = 50/117 (42%), Positives = 65/117 (55%)
Frame = +1
Query: 43 KENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLRYE 222
K + W L PSKW + R+ K P PDF HKE EALW+D P WV+ KL L +
Sbjct: 363 KGHLWEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGIK-PEWVLSKLKTLEID 421
Query: 223 AFASSVLVEDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAETPAWA 393
+ DLW A+R KW D R +K + K PDF HKD+ + LW++ + TP WA
Sbjct: 422 Q-RQNKDSNDLWKDLVANRDKWWDNRLSKVNPKAPDFKHKDSGKGLWLNGS-TPDWA 476
Score = 86.3 bits (212), Expect = 4e-15
Identities = 50/139 (35%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Frame = +1
Query: 148 EEALWIDSKNTPNWVIPKLNGLRYEAFASSVLVEDLWISFFADRSKWLDYRKTKKSDKHP 327
EE W K TP+ + N ++ +V VE LW FA W D R K++ ++P
Sbjct: 195 EELSW-SKKITPSPKQTEENSEDFDKVQKAVAVEGLWKELFAKPYNWYDNRFDKRNPRYP 253
Query: 328 DFVHKDTTEALWID---------AAETPAWATLMLNNLQTEGFAPSTSTENLWKDLFADP 480
DF +K++ EALW+D A E+P + N + E + W+DLFADP
Sbjct: 254 DFRNKNSKEALWLDKHTPDSVLSALESPEFCAKFANGQKIEKIRADIG--HRWEDLFADP 311
Query: 481 SKWLDNRNTKESIKYPDFK 537
SKW DNR K +PDFK
Sbjct: 312 SKWCDNRKVKTQPTHPDFK 330
>ref|XP_006280485.1| hypothetical protein CARUB_v10026422mg [Capsella rubella]
gi|482549189|gb|EOA13383.1| hypothetical protein
CARUB_v10026422mg [Capsella rubella]
Length = 437
Score = 109 bits (273), Expect = 4e-22
Identities = 63/181 (34%), Positives = 89/181 (49%), Gaps = 18/181 (9%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
N+W L+ +P +W ++R NK P PDF K +LW+ + P+W + KL+ L
Sbjct: 227 NSWKHLIENPKEWFDHRGNKANGLVKPKHPDFKRKAGGLSLWLST--VPDWALLKLDELE 284
Query: 217 YEAFASSVLV-------EDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAA 375
++ F + + E+ W + KW D R K + K PDF HK+T EALW+
Sbjct: 285 FDVFVPNGDIKLKQLKGEESWKDLVQNPDKWFDNRSEKTNVKAPDFKHKETGEALWM--T 342
Query: 376 ETPAWATLMLNNLQTEGFAPSTST-------ENLWKDLFADPSKWLDNRNTKESIKYPDF 534
++P W L L+ P S E WK+L DPSKW DNR K + K PDF
Sbjct: 343 DSPIWVLSKLPPLKKNQERPLMSNTVSLHKKEESWKNLVEDPSKWWDNRVDKRNPKGPDF 402
Query: 535 K 537
K
Sbjct: 403 K 403
Score = 90.5 bits (223), Expect = 2e-16
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 7/131 (5%)
Frame = +1
Query: 46 ENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLRYEA 225
E +W L+ +P KW + R K PDF HKE EALW+ ++P WV+ KL L+
Sbjct: 302 EESWKDLVQNPDKWFDNRSEKTNVKAPDFKHKETGEALWMT--DSPIWVLSKLPPLKKNQ 359
Query: 226 ----FASSVLV---EDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAETP 384
+++V + E+ W + D SKW D R K++ K PDF HK+T EALWI + +P
Sbjct: 360 ERPLMSNTVSLHKKEESWKNLVEDPSKWWDNRVDKRNPKGPDFKHKETGEALWI--SSSP 417
Query: 385 AWATLMLNNLQ 417
WA L L+
Sbjct: 418 TWALSELPPLE 428
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 43 KENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKL 204
KE +W +L+ PSKW + R +K+ P PDF HKE EALWI S +P W + +L
Sbjct: 373 KEESWKNLVEDPSKWWDNRVDKRNPKGPDFKHKETGEALWISS--SPTWALSEL 424
>ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arabidopsis lyrata subsp.
lyrata] gi|297309381|gb|EFH39805.1| hypothetical protein
ARALYDRAFT_494502 [Arabidopsis lyrata subsp. lyrata]
Length = 441
Score = 106 bits (264), Expect = 4e-21
Identities = 64/195 (32%), Positives = 90/195 (46%), Gaps = 32/195 (16%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
N+W L+ +P +WL++R NK P PDF K +LW+ + P+W +PKL L
Sbjct: 216 NSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLST--APDWALPKLKELE 273
Query: 217 YEAFA-------SSVLVEDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAA 375
++ + + E+ W + KWLD R K + K+PDF HK+T EALW+
Sbjct: 274 FDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRLDKTNVKYPDFKHKETGEALWM--T 331
Query: 376 ETPAWATLMLNNLQTEGFAPSTST---------------------ENLWKDLFADPSKWL 492
+P W L L+ P S E WK+L +PSKW
Sbjct: 332 NSPIWVLSKLPPLKKNQERPLMSNTVPQLELDVVVPNGNLTQLKREESWKNLVENPSKWW 391
Query: 493 DNRNTKESIKYPDFK 537
DNR K + K PDFK
Sbjct: 392 DNRLDKRNPKAPDFK 406
Score = 85.9 bits (211), Expect = 5e-15
Identities = 52/145 (35%), Positives = 72/145 (49%), Gaps = 21/145 (14%)
Frame = +1
Query: 46 ENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLRYEA 225
E +W L+ +P KWL+ R +K +PDF HKE EALW+ N+P WV+ KL L+
Sbjct: 291 EESWKDLVQNPDKWLDNRLDKTNVKYPDFKHKETGEALWMT--NSPIWVLSKLPPLKKNQ 348
Query: 226 -----------FASSVLV----------EDLWISFFADRSKWLDYRKTKKSDKHPDFVHK 342
V+V E+ W + + SKW D R K++ K PDF HK
Sbjct: 349 ERPLMSNTVPQLELDVVVPNGNLTQLKREESWKNLVENPSKWWDNRLDKRNPKAPDFKHK 408
Query: 343 DTTEALWIDAAETPAWATLMLNNLQ 417
+T E LWI+ +P WA L L+
Sbjct: 409 ETGEVLWIN-NNSPTWALSKLPPLK 432
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +1
Query: 43 KENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
+E +W +L+ +PSKW + R +K+ P PDF HKE E LWI++ N+P W + KL L+
Sbjct: 376 REESWKNLVENPSKWWDNRLDKRNPKAPDFKHKETGEVLWINN-NSPTWALSKLPPLK 432
>ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana]
gi|75328911|sp|Q8GWJ4.1|OSB3_ARATH RecName: Full=Protein
OSB3, chloroplastic/mitochondrial; AltName:
Full=Organellar single-stranded DNA-binding protein 3;
Flags: Precursor gi|26452626|dbj|BAC43396.1| unknown
protein [Arabidopsis thaliana]
gi|28973013|gb|AAO63831.1| unknown protein [Arabidopsis
thaliana] gi|30102734|gb|AAP21285.1| At5g44785
[Arabidopsis thaliana] gi|110743279|dbj|BAE99530.1|
hypothetical protein [Arabidopsis thaliana]
gi|332007779|gb|AED95162.1| protein OSB3 [Arabidopsis
thaliana]
Length = 440
Score = 105 bits (261), Expect = 9e-21
Identities = 63/195 (32%), Positives = 91/195 (46%), Gaps = 32/195 (16%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
N+W L+ +P +WL++R NK P PDF K +LW+ + P+W + KL L+
Sbjct: 216 NSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLST--APDWALLKLEELK 273
Query: 217 YEAFA-------SSVLVEDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAA 375
++ + + E+ W + KWLD R K + K+PDF HK+T EALW+
Sbjct: 274 FDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWM--T 331
Query: 376 ETPAWATLMLNNLQTEGFAPSTST---------------------ENLWKDLFADPSKWL 492
+P W L L+ P S E +WK+L +PSKW
Sbjct: 332 NSPIWVLSKLPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWW 391
Query: 493 DNRNTKESIKYPDFK 537
DNR K + K PDFK
Sbjct: 392 DNRLDKRNPKGPDFK 406
Score = 91.3 bits (225), Expect = 1e-16
Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Frame = +1
Query: 46 ENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLRYEA 225
E +W L+ +P KWL+ R +K +PDF HKE EALW+ N+P WV+ KL L+
Sbjct: 291 EESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMT--NSPIWVLSKLPPLKKNQ 348
Query: 226 ---FASSVLV------------------EDLWISFFADRSKWLDYRKTKKSDKHPDFVHK 342
F S+ + E++W + + SKW D R K++ K PDF HK
Sbjct: 349 ERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHK 408
Query: 343 DTTEALWIDAAETPAWATLMLNNLQ 417
+T EALWI ++P WA L L+
Sbjct: 409 ETGEALWI--GDSPTWALSKLPPLK 431
Score = 57.8 bits (138), Expect = 2e-06
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 43 KENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
+E W +L+ +PSKW + R +K+ P PDF HKE EALWI ++P W + KL L+
Sbjct: 376 REEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIG--DSPTWALSKLPPLK 431
>gb|AAM61481.1| unknown [Arabidopsis thaliana]
Length = 440
Score = 105 bits (261), Expect = 9e-21
Identities = 63/195 (32%), Positives = 91/195 (46%), Gaps = 32/195 (16%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
N+W L+ +P +WL++R NK P PDF K +LW+ + P+W + KL L+
Sbjct: 216 NSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLST--APDWALLKLEELK 273
Query: 217 YEAFA-------SSVLVEDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAA 375
++ + + E+ W + KWLD R K + K+PDF HK+T EALW+
Sbjct: 274 FDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWM--T 331
Query: 376 ETPAWATLMLNNLQTEGFAPSTST---------------------ENLWKDLFADPSKWL 492
+P W L L+ P S E +WK+L +PSKW
Sbjct: 332 NSPIWVLSKLPPLKKNQERPLMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWW 391
Query: 493 DNRNTKESIKYPDFK 537
DNR K + K PDFK
Sbjct: 392 DNRLDKRNPKGPDFK 406
Score = 90.5 bits (223), Expect = 2e-16
Identities = 51/145 (35%), Positives = 73/145 (50%), Gaps = 21/145 (14%)
Frame = +1
Query: 46 ENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLRY-- 219
E +W L+ +P KWL+ R +K +PDF HKE EALW+ N+P WV+ KL L+
Sbjct: 291 EESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMT--NSPIWVLSKLPPLKKNQ 348
Query: 220 -------------------EAFASSVLVEDLWISFFADRSKWLDYRKTKKSDKHPDFVHK 342
+ + E++W + + SKW D R K++ K PDF HK
Sbjct: 349 ERPLMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHK 408
Query: 343 DTTEALWIDAAETPAWATLMLNNLQ 417
+T EALWI ++P WA L L+
Sbjct: 409 ETGEALWI--GDSPTWALSKLPPLK 431
Score = 57.8 bits (138), Expect = 2e-06
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 43 KENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
+E W +L+ +PSKW + R +K+ P PDF HKE EALWI ++P W + KL L+
Sbjct: 376 REEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIG--DSPTWALSKLPPLK 431
>ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|332007778|gb|AED95161.1|
protein OSB3 [Arabidopsis thaliana]
Length = 442
Score = 103 bits (258), Expect = 2e-20
Identities = 63/197 (31%), Positives = 90/197 (45%), Gaps = 34/197 (17%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
N+W L+ +P +WL++R NK P PDF K +LW+ + P+W + KL L+
Sbjct: 216 NSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLST--APDWALLKLEELK 273
Query: 217 YEAFASSVLV---------EDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWID 369
++ + E+ W + KWLD R K + K+PDF HK+T EALW+
Sbjct: 274 FDVLVPKGNIKLNQLKDIGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWM- 332
Query: 370 AAETPAWATLMLNNLQTEGFAPSTST---------------------ENLWKDLFADPSK 486
+P W L L+ P S E +WK+L +PSK
Sbjct: 333 -TNSPIWVLSKLPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSK 391
Query: 487 WLDNRNTKESIKYPDFK 537
W DNR K + K PDFK
Sbjct: 392 WWDNRLDKRNPKGPDFK 408
Score = 91.3 bits (225), Expect = 1e-16
Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Frame = +1
Query: 46 ENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLRYEA 225
E +W L+ +P KWL+ R +K +PDF HKE EALW+ N+P WV+ KL L+
Sbjct: 293 EESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMT--NSPIWVLSKLPPLKKNQ 350
Query: 226 ---FASSVLV------------------EDLWISFFADRSKWLDYRKTKKSDKHPDFVHK 342
F S+ + E++W + + SKW D R K++ K PDF HK
Sbjct: 351 ERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHK 410
Query: 343 DTTEALWIDAAETPAWATLMLNNLQ 417
+T EALWI ++P WA L L+
Sbjct: 411 ETGEALWI--GDSPTWALSKLPPLK 433
Score = 57.8 bits (138), Expect = 2e-06
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 43 KENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
+E W +L+ +PSKW + R +K+ P PDF HKE EALWI ++P W + KL L+
Sbjct: 378 REEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIG--DSPTWALSKLPPLK 433
>gb|EXB42196.1| hypothetical protein L484_001276 [Morus notabilis]
Length = 380
Score = 102 bits (254), Expect = 6e-20
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 25/188 (13%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENK----KTPNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
++W LL +P +W + R+ K + +PDF+HK++ +W++ P V+ +L GL+
Sbjct: 157 SSWTDLLENPKQWWDNRDKKCNRSVSQKYPDFIHKDDRRGVWLN--RAPRSVLIELEGLQ 214
Query: 217 YEA-FASSVLVEDL-----------WISFFADRSKWLDYRKTKKSD----KHPDFVHKDT 348
++ +S VE W + +W DYR +K + ++PDF HKD
Sbjct: 215 FDVQIKNSTEVEQFKGAKKDGDSASWRDLIDNSEQWKDYRNSKLNGLVNPRYPDFKHKDG 274
Query: 349 TEALWIDAAETPAWATLMLNNLQTEGF-----APSTSTENLWKDLFADPSKWLDNRNTKE 513
+ ALW+ +A P W +L L L+ +G A + + LWKDL P KW DNR K
Sbjct: 275 SLALWLSSA--PQWVSLQLEGLKFDGGFKKPKAVKANKDELWKDLVEHPEKWWDNRLGKL 332
Query: 514 SIKYPDFK 537
PDFK
Sbjct: 333 KENSPDFK 340
Score = 78.6 bits (192), Expect = 9e-13
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Frame = +1
Query: 52 AWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLRY 219
+W L+++ +W +YR +K P +PDF HK+ ALW+ S P WV +L GL++
Sbjct: 239 SWRDLIDNSEQWKDYRNSKLNGLVNPRYPDFKHKDGSLALWLSS--APQWVSLQLEGLKF 296
Query: 220 EAF-----ASSVLVEDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAETP 384
+ A ++LW KW D R K + PDF HK+T E LW+ +P
Sbjct: 297 DGGFKKPKAVKANKDELWKDLVEHPEKWWDNRLGKLKENSPDFKHKETGEGLWL--RSSP 354
Query: 385 AW 390
W
Sbjct: 355 TW 356
>ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495963|gb|AES77166.1|
Protein OSB3 [Medicago truncatula]
Length = 491
Score = 101 bits (252), Expect = 1e-19
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
+ W LL+ P KW ++R++K+ P +PDF K+ ++W+D + V+ +L L
Sbjct: 276 STWGDLLDDPKKWWDFRDSKRNGSVNPKYPDFKRKDGNVSIWLDKASKS--VLSRLKELE 333
Query: 217 YEA------FASSVLVEDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAE 378
++ ++ W + +KW D R KK + PDF HKDT LW+ +
Sbjct: 334 FDTPPVKPKQTKDSKGDESWNDLLQNPAKWWDNRVDKKYARAPDFKHKDTGVGLWL--RD 391
Query: 379 TPAWATLMLNNLQTEGFA-------PSTSTENLWKDLFADPSKWLDNRNTKESIKYPDFK 537
+P+W + L L+ E + S ++ W DL +P+KW DNR K++ K PDFK
Sbjct: 392 SPSWVSSRLKELEVESTSVKSKQAKDSKGSDESWNDLLQNPAKWWDNRLDKKNPKGPDFK 451
Score = 86.3 bits (212), Expect = 4e-15
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Frame = +1
Query: 46 ENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLRYEA 225
+ +W LL +P+KW + R +KK PDF HK+ LW+ +++P+WV +L L E+
Sbjct: 350 DESWNDLLQNPAKWWDNRVDKKYARAPDFKHKDTGVGLWL--RDSPSWVSSRLKELEVES 407
Query: 226 FA-------SSVLVEDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAETP 384
+ S ++ W + +KW D R KK+ K PDF HKDT EALW+ +P
Sbjct: 408 TSVKSKQAKDSKGSDESWNDLLQNPAKWWDNRLDKKNPKGPDFKHKDTGEALWLRG--SP 465
Query: 385 AWATLMLNNLQTEGFAPSTS 444
+W L L+ + + TS
Sbjct: 466 SWVLPKLPPLKPKQQSAETS 485
Score = 76.6 bits (187), Expect = 3e-12
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 8/185 (4%)
Frame = +1
Query: 7 NLQSEAFAPFPTKENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPN 186
++ SE T+++ W ++N PS+W K++P DF K E P
Sbjct: 208 DIHSEKTEQHDTRKS-WRDVINKPSQWKAVHSPKESPKNADFESKTEGEL-------QPG 259
Query: 187 WVIPKLNGLRYEAFASSVLVEDLWISFFADRSKWLDYRKTKK----SDKHPDFVHKDTTE 354
+ +Y SS W D KW D+R +K+ + K+PDF KD
Sbjct: 260 LKQSTTSAKKYTGSLSST-----WGDLLDDPKKWWDFRDSKRNGSVNPKYPDFKRKDGNV 314
Query: 355 ALWIDAAETPAWATLMLNNLQTEGFAPSTSTEN----LWKDLFADPSKWLDNRNTKESIK 522
++W+D A + L T P + ++ W DL +P+KW DNR K+ +
Sbjct: 315 SIWLDKASKSVLSRLKELEFDTPPVKPKQTKDSKGDESWNDLLQNPAKWWDNRVDKKYAR 374
Query: 523 YPDFK 537
PDFK
Sbjct: 375 APDFK 379
>ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus communis]
gi|223531010|gb|EEF32864.1| hypothetical protein
RCOM_1716690 [Ricinus communis]
Length = 281
Score = 101 bits (251), Expect = 1e-19
Identities = 63/185 (34%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Frame = +1
Query: 46 ENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLRY-- 219
E +W LL SP +W + R P F K+N E L+ID TP W+ KL G+ +
Sbjct: 66 EQSWKDLLTSPHEWWDIRSQVDNPKGASFERKKNGELLYIDHA-TPKWIQEKLEGMAFDK 124
Query: 220 ----EAFASSVL-----VEDLWISFFADRSKWLDYRKTKKSD----KHPDFVHKDTTEAL 360
E S++ V + W +D +W DYR +K + KHPDF KD AL
Sbjct: 125 KTTVEGGKGSMIKNGDSVLNSWRELASDPKQWWDYRSSKLNGLVNPKHPDFKRKDGDVAL 184
Query: 361 WIDAAETPAWATLMLNNLQTEGFAPSTST------ENLWKDLFADPSKWLDNRNTKESIK 522
W++ A P W L L+ + P + + W DL P+KW DNR K++ +
Sbjct: 185 WLNKA--PRWILSELEKLEFDVQIPKSKQVKQHKGDANWTDLVGHPNKWWDNRLNKKNER 242
Query: 523 YPDFK 537
YPDFK
Sbjct: 243 YPDFK 247
Score = 76.3 bits (186), Expect = 4e-12
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
N+W L + P +W +YR +K P PDF K+ + ALW++ P W++ +L L
Sbjct: 144 NSWRELASDPKQWWDYRSSKLNGLVNPKHPDFKRKDGDVALWLNK--APRWILSELEKLE 201
Query: 217 YEA-FASSVLVEDL-----WISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAE 378
++ S V+ W +KW D R KK++++PDF HK+T LW+ +
Sbjct: 202 FDVQIPKSKQVKQHKGDANWTDLVGHPNKWWDNRLNKKNERYPDFKHKETGVGLWL--SN 259
Query: 379 TPAW 390
+P W
Sbjct: 260 SPTW 263
>ref|XP_006398112.1| hypothetical protein EUTSA_v10000889mg [Eutrema salsugineum]
gi|557099201|gb|ESQ39565.1| hypothetical protein
EUTSA_v10000889mg [Eutrema salsugineum]
Length = 437
Score = 99.4 bits (246), Expect = 5e-19
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
NAW LL +P +W+++R NK + P PDF KE + +LW+DS P+WV+ KLN L+
Sbjct: 205 NAWKHLLENPKEWVDHRGNKASGLVKPRHPDFKGKEGDLSLWLDS--APDWVLQKLNRLK 262
Query: 217 YEAFA-----SSVLVEDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAET 381
++ F + E+ W + KWLD R TK + K PDF H++T EALW+ ++
Sbjct: 263 FDVFVPKGKLKQLKGEESWKDLVENPDKWLDSRSTKTNVKAPDFKHRETGEALWM--TDS 320
Query: 382 PAWATLMLNNLQTEGFAPS-TSTENL----WKDLFADPSKWLDNRNTKESIKYPDFK 537
P W L L+ P +T N+ +K + + W+ T +K P K
Sbjct: 321 PTWVLSKLPPLKKTQERPQIVNTTNVKAPDFKHKESGEALWMTASPTWVLLKLPPLK 377
Score = 68.9 bits (167), Expect = 7e-10
Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Frame = +1
Query: 1 LNNLQSEAFAPFPTK-----ENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWI 165
LN L+ + F P E +W L+ +P KWL+ R K PDF H+E EALW+
Sbjct: 258 LNRLKFDVFVPKGKLKQLKGEESWKDLVENPDKWLDSRSTKTNVKAPDFKHRETGEALWM 317
Query: 166 DSKNTPNWVIPKLNGLRYEAFASSVLVEDLWISFFADRSKWLDYRKTKKSDKHPDFVHKD 345
++P WV+ KL L+ ++ + K PDF HK+
Sbjct: 318 --TDSPTWVLSKLPPLKKTQERPQIV--------------------NTTNVKAPDFKHKE 355
Query: 346 TTEALWIDAAETPAWATLMLNNLQ 417
+ EALW+ A +P W L L L+
Sbjct: 356 SGEALWMTA--SPTWVLLKLPPLK 377
>ref|XP_001703164.1| chloroplast-targeted RNA-binding protein [Chlamydomonas
reinhardtii] gi|37545634|gb|AAM76787.1| RNA-binding
protein RB38 [Chlamydomonas reinhardtii]
gi|37723144|gb|AAP30010.1| 38 kDa RNA-binding protein
[Chlamydomonas reinhardtii] gi|158270704|gb|EDO96540.1|
chloroplast-targeted RNA-binding protein [Chlamydomonas
reinhardtii]
Length = 382
Score = 93.6 bits (231), Expect = 3e-17
Identities = 64/207 (30%), Positives = 88/207 (42%), Gaps = 46/207 (22%)
Frame = +1
Query: 55 WISLLNSPSKWLNYRENKKTPNFPDFVHKENEE-ALWIDSKNTPNWVIPKLNGL------ 213
W +L ++P +W + R K + PDFV +++ ALW+DS+ P WV L L
Sbjct: 141 WEALRSNPDEWYDNRNRKTSDRQPDFVRRDDRNSALWLDSRGVPEWVDELLAELDERQAA 200
Query: 214 ----------------RYEAFASSVLVEDL--WISFFADRSKWLDYRKTKKSDKHPDFVH 339
R E E+L W S A+ +W D R K SD+ PDFV
Sbjct: 201 RREQRVAERAAGGGDERQEGGGGRRGAEELANWESLRANPIEWYDNRSRKTSDRQPDFVR 260
Query: 340 KDTTEA-LWIDAAETPAWATLMLNNLQT------------EGFAPSTSTENL-------- 456
+D A LW+D+ P W +L L APST
Sbjct: 261 RDDRRAALWLDSRGAPPWVGDLLAELDAAAQARRQQRQAERSAAPSTPELEAKRAAEAAN 320
Query: 457 WKDLFADPSKWLDNRNTKESIKYPDFK 537
W+ L A+P W DNRN K++ K PDF+
Sbjct: 321 WESLRANPEAWFDNRNNKQTPKSPDFR 347
Score = 87.0 bits (214), Expect = 2e-15
Identities = 61/212 (28%), Positives = 87/212 (41%), Gaps = 52/212 (24%)
Frame = +1
Query: 55 WISLLNSPSKWLNYRENKKTPNFPDFVHKENEE-ALWIDSKNTPNWVIPKLNGL------ 213
W L ++P +W + R K P PDFV K++ ALWID ++ P WV L+ L
Sbjct: 47 WEQLRSNPDEWYDNRTRKTNPKAPDFVRKDDRAVALWIDGRDVPTWVEELLHDLDSRQVN 106
Query: 214 -RYEAFASS-------------------VLVEDLWISFFADRSKWLDYRKTKKSDKHPDF 333
R + + S W + ++ +W D R K SD+ PDF
Sbjct: 107 RRQQRDSESGDERGGRGERRSGPGGGRQAAEAANWEALRSNPDEWYDNRNRKTSDRQPDF 166
Query: 334 VHK-DTTEALWIDAAETPAWATLMLNNL----------------------QTEGFAPSTS 444
V + D ALW+D+ P W +L L + EG
Sbjct: 167 VRRDDRNSALWLDSRGVPEWVDELLAELDERQAARREQRVAERAAGGGDERQEGGGGRRG 226
Query: 445 TENL--WKDLFADPSKWLDNRNTKESIKYPDF 534
E L W+ L A+P +W DNR+ K S + PDF
Sbjct: 227 AEELANWESLRANPIEWYDNRSRKTSDRQPDF 258
Score = 67.8 bits (164), Expect = 2e-09
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 22/142 (15%)
Frame = +1
Query: 55 WISLLNSPSKWLNYRENKKTPNFPDFVHKENEE-ALWIDSKNTPNWVIPKLNGL------ 213
W SL +P +W + R K + PDFV +++ ALW+DS+ P WV L L
Sbjct: 233 WESLRANPIEWYDNRSRKTSDRQPDFVRRDDRRAALWLDSRGAPPWVGDLLAELDAAAQA 292
Query: 214 ----RYEAFASSVLVEDL----------WISFFADRSKWLDYRKTKKSDKHPDFVHK-DT 348
R +++ +L W S A+ W D R K++ K PDF K D
Sbjct: 293 RRQQRQAERSAAPSTPELEAKRAAEAANWESLRANPEAWFDNRNNKQTPKSPDFRKKDDR 352
Query: 349 TEALWIDAAETPAWATLMLNNL 414
T+ALW+ + P W +L+ L
Sbjct: 353 TQALWVTSYGAPEWLNELLSEL 374
>ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidopsis thaliana]
gi|332658861|gb|AEE84261.1| plastid transcriptionally
active 9 [Arabidopsis thaliana]
Length = 371
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
++W L+ +P +W ++RENK P PDF K++ +LW++ PNWV+PKL GL
Sbjct: 235 DSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNK--APNWVLPKLEGLE 292
Query: 217 YEAFASSVLV------EDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAE 378
++ V E+ W + KW D R K++ K PDF HK+T EALW++ E
Sbjct: 293 FDVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--E 350
Query: 379 TPAW 390
+P W
Sbjct: 351 SPTW 354
Score = 68.9 bits (167), Expect = 7e-10
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Frame = +1
Query: 250 DLWISFFADRSKWLDYRKTKKSD----KHPDFVHKDTTEALWIDAAETPAWATLMLNNLQ 417
D W + +W D+R+ K + +HPDF KD++ +LW++ A P W L L+
Sbjct: 235 DSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKA--PNWVLPKLEGLE 292
Query: 418 TEGFAPSTST------ENLWKDLFADPSKWLDNRNTKESIKYPDFK 537
+ P E WKDL +P KW DNR K + K PDFK
Sbjct: 293 FDVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFK 338
Score = 56.6 bits (135), Expect = 4e-06
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +1
Query: 46 ENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKL 204
E +W L+ +P KW + R +K+ PDF HKE EALW++ +P WV+PKL
Sbjct: 309 EESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--ESPTWVLPKL 359
>dbj|BAC42861.1| unknown protein [Arabidopsis thaliana]
Length = 371
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
++W L+ +P +W ++RENK P PDF K++ +LW++ PNWV+PKL GL
Sbjct: 235 DSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNK--APNWVLPKLEGLE 292
Query: 217 YEAFASSVLV------EDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAE 378
++ V E+ W + KW D R K++ K PDF HK+T EALW++ E
Sbjct: 293 FDVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--E 350
Query: 379 TPAW 390
+P W
Sbjct: 351 SPTW 354
Score = 68.9 bits (167), Expect = 7e-10
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Frame = +1
Query: 250 DLWISFFADRSKWLDYRKTKKSD----KHPDFVHKDTTEALWIDAAETPAWATLMLNNLQ 417
D W + +W D+R+ K + +HPDF KD++ +LW++ A P W L L+
Sbjct: 235 DSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKA--PNWVLPKLEGLE 292
Query: 418 TEGFAPSTST------ENLWKDLFADPSKWLDNRNTKESIKYPDFK 537
+ P E WKDL +P KW DNR K + K PDFK
Sbjct: 293 FDVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFK 338
Score = 56.6 bits (135), Expect = 4e-06
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +1
Query: 46 ENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKL 204
E +W L+ +P KW + R +K+ PDF HKE EALW++ +P WV+PKL
Sbjct: 309 EESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--ESPTWVLPKL 359
>ref|NP_567593.1| plastid transcriptionally active 9 [Arabidopsis thaliana]
gi|259517764|sp|Q8GXH3.2|OSB2_ARATH RecName:
Full=Protein OSB2, chloroplastic; AltName:
Full=Organellar single-stranded DNA-binding protein 2;
AltName: Full=Protein FLORAL ABSCISSION ASSOCIATED;
AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE
9; Flags: Precursor gi|2827655|emb|CAA16609.1|
hypothetical protein [Arabidopsis thaliana]
gi|7268796|emb|CAB79001.1| hypothetical protein
[Arabidopsis thaliana] gi|111074390|gb|ABH04568.1|
At4g20010 [Arabidopsis thaliana]
gi|332658860|gb|AEE84260.1| plastid transcriptionally
active 9 [Arabidopsis thaliana]
Length = 371
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
++W L+ +P +W ++RENK P PDF K++ +LW++ PNWV+PKL GL
Sbjct: 235 DSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNK--APNWVLPKLEGLE 292
Query: 217 YEAFASSVLV------EDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAE 378
++ V E+ W + KW D R K++ K PDF HK+T EALW++ E
Sbjct: 293 FDVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--E 350
Query: 379 TPAW 390
+P W
Sbjct: 351 SPTW 354
Score = 68.9 bits (167), Expect = 7e-10
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Frame = +1
Query: 250 DLWISFFADRSKWLDYRKTKKSD----KHPDFVHKDTTEALWIDAAETPAWATLMLNNLQ 417
D W + +W D+R+ K + +HPDF KD++ +LW++ A P W L L+
Sbjct: 235 DSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKA--PNWVLPKLEGLE 292
Query: 418 TEGFAPSTST------ENLWKDLFADPSKWLDNRNTKESIKYPDFK 537
+ P E WKDL +P KW DNR K + K PDFK
Sbjct: 293 FDVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFK 338
Score = 56.6 bits (135), Expect = 4e-06
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +1
Query: 46 ENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKL 204
E +W L+ +P KW + R +K+ PDF HKE EALW++ +P WV+PKL
Sbjct: 309 EESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--ESPTWVLPKL 359
>ref|XP_006282647.1| hypothetical protein CARUB_v10004988mg, partial [Capsella rubella]
gi|482551352|gb|EOA15545.1| hypothetical protein
CARUB_v10004988mg, partial [Capsella rubella]
Length = 394
Score = 92.4 bits (228), Expect = 6e-17
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
++W L+ +P +W ++RENK P PDF K++ +LW++ PNWV+PKL GL
Sbjct: 258 DSWNRLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLNK--APNWVLPKLEGLE 315
Query: 217 YEAFASSVLV------EDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAE 378
++ + E+ W + KW D R K++ K PDF HK+T EALW++ E
Sbjct: 316 FDVLVPKARIVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--E 373
Query: 379 TPAW 390
+P W
Sbjct: 374 SPTW 377
Score = 68.6 bits (166), Expect = 9e-10
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Frame = +1
Query: 250 DLWISFFADRSKWLDYRKTKKSD----KHPDFVHKDTTEALWIDAAETPAWATLMLNNLQ 417
D W + +W D+R+ K + +HPDF KD++ +LW++ A P W L L+
Sbjct: 258 DSWNRLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLNKA--PNWVLPKLEGLE 315
Query: 418 TEGFAPSTST------ENLWKDLFADPSKWLDNRNTKESIKYPDFK 537
+ P E WKDL +P KW DNR K + K PDFK
Sbjct: 316 FDVLVPKARIVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFK 361
Score = 55.5 bits (132), Expect = 8e-06
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +1
Query: 46 ENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKL 204
E +W L+ +P KW + R +K+ PDF HKE EALW++ +P W++PKL
Sbjct: 332 EESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--ESPTWLLPKL 382
>ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arabidopsis lyrata subsp.
lyrata] gi|297315788|gb|EFH46211.1| hypothetical protein
ARALYDRAFT_492872 [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 92.4 bits (228), Expect = 6e-17
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 10/124 (8%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
++W L+ +P +W ++RENK P PDF K++ +LW++ PNWV+PKL GL+
Sbjct: 230 DSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLNK--APNWVLPKLEGLK 287
Query: 217 YEAFASSVLV------EDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAE 378
++ V E+ W + KW D R K++ K PDF HK+T EALW++ E
Sbjct: 288 FDVLVPKGRVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--E 345
Query: 379 TPAW 390
+P W
Sbjct: 346 SPTW 349
Score = 67.8 bits (164), Expect = 2e-09
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Frame = +1
Query: 250 DLWISFFADRSKWLDYRKTKKSD----KHPDFVHKDTTEALWIDAAETPAWATLMLNNLQ 417
D W + +W D+R+ K + +HPDF KD++ +LW++ A P W L L+
Sbjct: 230 DSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLNKA--PNWVLPKLEGLK 287
Query: 418 TEGFAPSTST------ENLWKDLFADPSKWLDNRNTKESIKYPDFK 537
+ P E WKDL +P KW DNR K + K PDFK
Sbjct: 288 FDVLVPKGRVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFK 333
Score = 56.6 bits (135), Expect = 4e-06
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +1
Query: 46 ENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKL 204
E +W L+ +P KW + R +K+ PDF HKE EALW++ +P WV+PKL
Sbjct: 304 EESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--ESPTWVLPKL 354
>gb|ESW24981.1| hypothetical protein PHAVU_004G177000g [Phaseolus vulgaris]
gi|561026297|gb|ESW24982.1| hypothetical protein
PHAVU_004G177000g [Phaseolus vulgaris]
Length = 353
Score = 90.9 bits (224), Expect = 2e-16
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 11/130 (8%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
++WI LL++P +W ++R++K+ P +PDF K+ +LW+++ T WV+PKL GL
Sbjct: 209 SSWIDLLDNPKQWFDFRDSKQNGLVNPKYPDFKRKDGTGSLWLNTATT--WVLPKLKGLE 266
Query: 217 YEAFASSVLV-------EDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAA 375
++ E W + +KW D R K+++K PDF HKDT E LW+D+
Sbjct: 267 FDVPVVKCKNAKDGKGGEVSWNDLVQNPAKWWDNRLDKRNEKAPDFKHKDTGEGLWLDS- 325
Query: 376 ETPAWATLML 405
+P+W L
Sbjct: 326 -SPSWVLAKL 334
Score = 68.2 bits (165), Expect = 1e-09
Identities = 49/159 (30%), Positives = 72/159 (45%), Gaps = 24/159 (15%)
Frame = +1
Query: 133 VHKENEEALWIDSKNTPNWVIPKLNGLRYE-----------AFASSVLVEDLWISFFADR 279
+H + E L I+S +TP WV KL + + A + WI +
Sbjct: 160 IHAKQSEDLNINS-STPKWVQEKLELVTIDQKPEPKHPISIAKKNPDSSMSSWIDLLDNP 218
Query: 280 SKWLDYRKTKKSD----KHPDFVHKDTTEALWIDAAETPAWATLMLNNLQTEGFAPSTST 447
+W D+R +K++ K+PDF KD T +LW++ A T W L L+ + P
Sbjct: 219 KQWFDFRDSKQNGLVNPKYPDFKRKDGTGSLWLNTATT--WVLPKLKGLEFD--VPVVKC 274
Query: 448 ENL---------WKDLFADPSKWLDNRNTKESIKYPDFK 537
+N W DL +P+KW DNR K + K PDFK
Sbjct: 275 KNAKDGKGGEVSWNDLVQNPAKWWDNRLDKRNEKAPDFK 313
>ref|XP_006413910.1| hypothetical protein EUTSA_v10025547mg [Eutrema salsugineum]
gi|557115080|gb|ESQ55363.1| hypothetical protein
EUTSA_v10025547mg [Eutrema salsugineum]
Length = 360
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
++W L+ +P +W ++RENK P PDF +K+ +LW++ P+WV+PKL GL
Sbjct: 223 DSWNHLIENPKEWWDHRENKANGLVKPRHPDFKNKDTSVSLWLNK--APDWVLPKLEGLE 280
Query: 217 YEAFA------SSVLVEDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAE 378
++ + E+ W + KW D R K++ K PDF HK+T EALW++ E
Sbjct: 281 FDVLVPKSRGVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--E 338
Query: 379 TPAW 390
+P W
Sbjct: 339 SPTW 342
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Frame = +1
Query: 250 DLWISFFADRSKWLDYRKTKKSD----KHPDFVHKDTTEALWIDAAETPAWATLMLNNLQ 417
D W + +W D+R+ K + +HPDF +KDT+ +LW++ A P W L L+
Sbjct: 223 DSWNHLIENPKEWWDHRENKANGLVKPRHPDFKNKDTSVSLWLNKA--PDWVLPKLEGLE 280
Query: 418 TEGFAPST------STENLWKDLFADPSKWLDNRNTKESIKYPDFK 537
+ P + E WKDL +P KW DNR K + K PDFK
Sbjct: 281 FDVLVPKSRGVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFK 326
Score = 56.6 bits (135), Expect = 4e-06
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +1
Query: 46 ENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKL 204
E +W L+ +P KW + R +K+ PDF HKE EALW++ +P WV+PKL
Sbjct: 297 EESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--ESPTWVLPKL 347
>gb|EOX96863.1| Plastid transcriptionally active 9, putative [Theobroma cacao]
Length = 344
Score = 89.0 bits (219), Expect = 6e-16
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 14/142 (9%)
Frame = +1
Query: 40 TKENAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLN 207
T N W LL++P +W +YRENK P +PDF HK++ ALW+DS P WV+ +L
Sbjct: 194 TAPNPWRDLLDNPKEWQDYRENKLNGLVKPKYPDFKHKDSGLALWLDS--APKWVLSELE 251
Query: 208 GLRYEAFASSVLV------EDLWISFFADRSKWLDYR----KTKKSDKHPDFVHKDTTEA 357
GL+++ + W + +KW D R K ++++PDF HK+T EA
Sbjct: 252 GLQFDVPIQKPKQLNRHKGDGSWKDLVENPNKWWDNRLDKFNGKINERYPDFKHKETGEA 311
Query: 358 LWIDAAETPAWATLMLNNLQTE 423
LW+ ++P W L +L ++
Sbjct: 312 LWL--TDSPVWVEPKLPSLTSK 331
Score = 68.9 bits (167), Expect = 7e-10
Identities = 42/110 (38%), Positives = 56/110 (50%), Gaps = 16/110 (14%)
Frame = +1
Query: 256 WISFFADRSKWLDYRKTKKSD----KHPDFVHKDTTEALWIDAAETPAWATLMLNNLQTE 423
W + +W DYR+ K + K+PDF HKD+ ALW+D+A P W L LQ +
Sbjct: 199 WRDLLDNPKEWQDYRENKLNGLVKPKYPDFKHKDSGLALWLDSA--PKWVLSELEGLQFD 256
Query: 424 GFAPSTSTENL--------WKDLFADPSKWLDNR----NTKESIKYPDFK 537
P + L WKDL +P+KW DNR N K + +YPDFK
Sbjct: 257 --VPIQKPKQLNRHKGDGSWKDLVENPNKWWDNRLDKFNGKINERYPDFK 304
>ref|XP_002330744.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 88.2 bits (217), Expect = 1e-15
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 10/124 (8%)
Frame = +1
Query: 49 NAWISLLNSPSKWLNYRENKKT----PNFPDFVHKENEEALWIDSKNTPNWVIPKLNGLR 216
N+W LL +P++W +YR +K++ P PDF HK N +++W+ P+W+ L ++
Sbjct: 206 NSWTDLLENPNQWWDYRSSKRSGLVKPKHPDFKHKNNNQSVWLTG--APSWIFSGLEKVK 263
Query: 217 YEAFAS------SVLVEDLWISFFADRSKWLDYRKTKKSDKHPDFVHKDTTEALWIDAAE 378
++ + E+ W + KW D R KK+ K PDF HK+T E LW+D
Sbjct: 264 FDVKTALPTQTKQQKEEECWKDLVENPHKWWDNRVDKKNPKSPDFKHKETGEGLWLDT-- 321
Query: 379 TPAW 390
+PAW
Sbjct: 322 SPAW 325
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Frame = +1
Query: 256 WISFFADRSKWLDYRKTKKSD----KHPDFVHKDTTEALWIDAAETPAWATLMLNNLQTE 423
W + ++W DYR +K+S KHPDF HK+ +++W+ A P+W L ++ +
Sbjct: 208 WTDLLENPNQWWDYRSSKRSGLVKPKHPDFKHKNNNQSVWLTGA--PSWIFSGLEKVKFD 265
Query: 424 -GFAPSTST-----ENLWKDLFADPSKWLDNRNTKESIKYPDFK 537
A T T E WKDL +P KW DNR K++ K PDFK
Sbjct: 266 VKTALPTQTKQQKEEECWKDLVENPHKWWDNRVDKKNPKSPDFK 309
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 43 KENAWISLLNSPSKWLNYRENKKTPNFPDFVHKENEEALWIDSKNTPNWVIPKL 204
+E W L+ +P KW + R +KK P PDF HKE E LW+D+ +P WV+PKL
Sbjct: 279 EEECWKDLVENPHKWWDNRVDKKNPKSPDFKHKETGEGLWLDT--SPAWVLPKL 330