BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00025419
         (407 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC06808.1| Putative mediator of RNA polymerase II transcript...   103   3e-20
ref|XP_001754008.1| predicted protein [Physcomitrella patens] gi...   103   3e-20
ref|XP_001755196.1| predicted protein [Physcomitrella patens] gi...   102   5e-20
ref|XP_002993355.1| hypothetical protein SELMODRAFT_431456 [Sela...   100   3e-19
ref|XP_002972741.1| hypothetical protein SELMODRAFT_441953 [Sela...    99   5e-19
emb|CBI40380.3| unnamed protein product [Vitis vinifera]               99   6e-19
gb|EOX95959.1| Mediator of RNA polymerase II transcription subun...    96   4e-18
gb|EOX95958.1| Mediator of RNA polymerase II transcription subun...    96   4e-18
gb|EOX95957.1| Mediator of RNA polymerase II transcription subun...    96   4e-18
ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...    95   9e-18
ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II tra...    94   1e-17
ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II tra...    94   1e-17
ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II tra...    94   1e-17
gb|EMJ21769.1| hypothetical protein PRUPE_ppa000036mg [Prunus pe...    94   2e-17
ref|XP_006375342.1| hypothetical protein POPTR_0014s080201g, par...    94   2e-17
ref|XP_001776860.1| predicted protein [Physcomitrella patens] gi...    94   2e-17
ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citr...    93   3e-17
ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citr...    93   3e-17
ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II tra...    93   3e-17
ref|XP_006576321.1| PREDICTED: mediator of RNA polymerase II tra...    93   4e-17

>gb|EXC06808.1| Putative mediator of RNA polymerase II transcription subunit 12
           [Morus notabilis]
          Length = 2274

 Score =  103 bits (256), Expect = 3e-20
 Identities = 49/93 (52%), Positives = 72/93 (77%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           ESL+ +++LLP+++  L+T++LSQ++VR+ V   V+++R  S  G+   L DN+R+AY  
Sbjct: 344 ESLEIVQLLLPIIYGVLETVVLSQTYVRSLVGIAVRFIREPSPGGS--DLVDNSRKAYTT 401

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCVCSH 129
             L+E+LRYLI+ VPDTFV+LDCFPLPSCV SH
Sbjct: 402 SALVEMLRYLIVAVPDTFVALDCFPLPSCVVSH 434


>ref|XP_001754008.1| predicted protein [Physcomitrella patens]
           gi|162694984|gb|EDQ81330.1| predicted protein
           [Physcomitrella patens]
          Length = 390

 Score =  103 bits (256), Expect = 3e-20
 Identities = 46/90 (51%), Positives = 68/90 (75%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           ES++ALE+LLP+L E +D I +SQ+H R  V+  +QWLR +   G+VP++ DN+R     
Sbjct: 196 ESVEALELLLPILLELIDGISMSQTHSRMLVELCLQWLRKLYPLGHVPSIGDNSRNNQVA 255

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCV 138
             L+++L+YL++V+PDTFV+LDCFPLP CV
Sbjct: 256 DTLVKLLQYLVLVIPDTFVALDCFPLPQCV 285


>ref|XP_001755196.1| predicted protein [Physcomitrella patens]
           gi|162693789|gb|EDQ80140.1| predicted protein
           [Physcomitrella patens]
          Length = 2111

 Score =  102 bits (254), Expect = 5e-20
 Identities = 46/90 (51%), Positives = 68/90 (75%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           ES++ALE+LLP+L E +D I +SQ+H R  V+  +QWLR +   G+VP++ DN+R     
Sbjct: 261 ESVEALELLLPILLELVDGISMSQTHSRMLVELCLQWLRKLYPLGHVPSIGDNSRNNRVA 320

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCV 138
             L+++L+YL++V+PDTFV+LDCFPLP CV
Sbjct: 321 DTLVKLLQYLVLVIPDTFVALDCFPLPQCV 350


>ref|XP_002993355.1| hypothetical protein SELMODRAFT_431456 [Selaginella moellendorffii]
           gi|300138786|gb|EFJ05540.1| hypothetical protein
           SELMODRAFT_431456 [Selaginella moellendorffii]
          Length = 2096

 Score =  100 bits (248), Expect = 3e-19
 Identities = 47/90 (52%), Positives = 64/90 (71%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           ESLD LE+LLPVL EF+D++ LSQ HVR  VD    WLR + +S  +P+ ++  ++   V
Sbjct: 328 ESLDGLELLLPVLLEFMDSLSLSQVHVRMLVDICQHWLRQLGVSNVLPSPEEQPQQYRIV 387

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCV 138
           +  +EILRYL++ VPDTFV+ DCFPL  CV
Sbjct: 388 VTFVEILRYLLVAVPDTFVAFDCFPLLPCV 417


>ref|XP_002972741.1| hypothetical protein SELMODRAFT_441953 [Selaginella moellendorffii]
           gi|300159342|gb|EFJ25962.1| hypothetical protein
           SELMODRAFT_441953 [Selaginella moellendorffii]
          Length = 2096

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 46/90 (51%), Positives = 64/90 (71%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           ESLD LE+LLPVL EF+D++ LSQ HVR  VD    WLR + +S  +P+ ++  ++   V
Sbjct: 328 ESLDGLELLLPVLLEFMDSLSLSQVHVRMLVDICQHWLRQLGVSNVLPSPEEQPQQYRIV 387

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCV 138
           +  +EI+RYL++ VPDTFV+ DCFPL  CV
Sbjct: 388 VTFVEIMRYLLVAVPDTFVAFDCFPLLPCV 417


>emb|CBI40380.3| unnamed protein product [Vitis vinifera]
          Length = 2037

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 47/99 (47%), Positives = 71/99 (71%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           E L+ L++LLP+++  ++T++LSQ++VR  V   V++++  S  G+   L DN+R AY  
Sbjct: 343 ELLEILQLLLPIIYGVIETVVLSQTYVRTLVGVAVRFIKEPSPGGS--DLVDNSRRAYTS 400

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCVCSHPPKIIF 111
             L+E+LR+LI+ VPDTFV+LDCFPLP CV SH P + F
Sbjct: 401 SALVEMLRFLILAVPDTFVALDCFPLPPCVVSHYPSLSF 439


>gb|EOX95959.1| Mediator of RNA polymerase II transcription subunit 12 isoform 3
           [Theobroma cacao]
          Length = 2257

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 48/93 (51%), Positives = 67/93 (72%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           E  + L++LLP++F  L+TIIL Q++VR  V   ++++R  S  G+   L DN+R AY +
Sbjct: 343 ELFEILQLLLPIIFGVLETIILCQTYVRNLVGIAIRFIREPSPGGS--DLVDNSRRAYTI 400

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCVCSH 129
             L+E+LRYLI  VPDTFV+LDCFPLP+CV SH
Sbjct: 401 SALVEMLRYLIQAVPDTFVALDCFPLPTCVVSH 433


>gb|EOX95958.1| Mediator of RNA polymerase II transcription subunit 12 isoform 2
           [Theobroma cacao]
          Length = 2237

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 48/93 (51%), Positives = 67/93 (72%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           E  + L++LLP++F  L+TIIL Q++VR  V   ++++R  S  G+   L DN+R AY +
Sbjct: 343 ELFEILQLLLPIIFGVLETIILCQTYVRNLVGIAIRFIREPSPGGS--DLVDNSRRAYTI 400

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCVCSH 129
             L+E+LRYLI  VPDTFV+LDCFPLP+CV SH
Sbjct: 401 SALVEMLRYLIQAVPDTFVALDCFPLPTCVVSH 433


>gb|EOX95957.1| Mediator of RNA polymerase II transcription subunit 12 isoform 1
           [Theobroma cacao]
          Length = 2261

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 48/93 (51%), Positives = 67/93 (72%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           E  + L++LLP++F  L+TIIL Q++VR  V   ++++R  S  G+   L DN+R AY +
Sbjct: 347 ELFEILQLLLPIIFGVLETIILCQTYVRNLVGIAIRFIREPSPGGS--DLVDNSRRAYTI 404

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCVCSH 129
             L+E+LRYLI  VPDTFV+LDCFPLP+CV SH
Sbjct: 405 SALVEMLRYLIQAVPDTFVALDCFPLPTCVVSH 437


>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 45/93 (48%), Positives = 68/93 (73%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           E L+ L++LLP+++  ++T++LSQ++VR  V   V++++  S  G+   L DN+R AY  
Sbjct: 343 ELLEILQLLLPIIYGVIETVVLSQTYVRTLVGVAVRFIKEPSPGGS--DLVDNSRRAYTS 400

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCVCSH 129
             L+E+LR+LI+ VPDTFV+LDCFPLP CV SH
Sbjct: 401 SALVEMLRFLILAVPDTFVALDCFPLPPCVVSH 433


>ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           12-like [Fragaria vesca subsp. vesca]
          Length = 2261

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 45/93 (48%), Positives = 69/93 (74%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           E L+ +++LLP+++  L+T++LSQ++VR  V   V+++R  S  G+   L DN+R AY V
Sbjct: 343 ELLEIVQLLLPIIYGVLETVVLSQTYVRNLVGTAVRFIREPSQGGS--DLVDNSRRAYTV 400

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCVCSH 129
             L+E+LRYL++ VPD+FV+LDCFPLP CV S+
Sbjct: 401 SALVEMLRYLVLSVPDSFVALDCFPLPPCVVSY 433


>ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           12-like [Cucumis sativus]
          Length = 2254

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 45/91 (49%), Positives = 64/91 (70%)
 Frame = -1

Query: 401 LDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNVIF 222
           L+ LE+LLP+++  LDTI+LSQ++VR  V   ++++R     G+   L DN+R  Y    
Sbjct: 345 LEILELLLPIIYGVLDTIVLSQTYVRTLVRISIRFIRDSFPGGS--DLVDNSRRVYTTSA 402

Query: 221 LIEILRYLIIVVPDTFVSLDCFPLPSCVCSH 129
           L+E+LRYL++ VPDTFV+LDCFP P CV SH
Sbjct: 403 LVEMLRYLVLAVPDTFVALDCFPFPRCVVSH 433


>ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           12-like [Cucumis sativus]
          Length = 2254

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 45/91 (49%), Positives = 64/91 (70%)
 Frame = -1

Query: 401 LDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNVIF 222
           L+ LE+LLP+++  LDTI+LSQ++VR  V   ++++R     G+   L DN+R  Y    
Sbjct: 345 LEILELLLPIIYGVLDTIVLSQTYVRTLVRISIRFIRDSFPGGS--DLVDNSRRVYTTSA 402

Query: 221 LIEILRYLIIVVPDTFVSLDCFPLPSCVCSH 129
           L+E+LRYL++ VPDTFV+LDCFP P CV SH
Sbjct: 403 LVEMLRYLVLAVPDTFVALDCFPFPRCVVSH 433


>gb|EMJ21769.1| hypothetical protein PRUPE_ppa000036mg [Prunus persica]
          Length = 2210

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 45/93 (48%), Positives = 69/93 (74%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           E L+ +++LLP+++  L+T++LSQ++VR  V   V+++R  S  G+   +  N+R AY V
Sbjct: 344 ELLEIMQLLLPIVYGVLETVVLSQTYVRNLVGVAVRFIREPSQGGS--DVVGNSRRAYTV 401

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCVCSH 129
             ++E+LRYLI+ VPDTFV+LDCFPLPSCV S+
Sbjct: 402 STVVEMLRYLILAVPDTFVALDCFPLPSCVVSY 434


>ref|XP_006375342.1| hypothetical protein POPTR_0014s080201g, partial [Populus
           trichocarpa] gi|550323754|gb|ERP53139.1| hypothetical
           protein POPTR_0014s080201g, partial [Populus
           trichocarpa]
          Length = 1107

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 47/91 (51%), Positives = 66/91 (72%)
 Frame = -1

Query: 401 LDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNVIF 222
           L+ L++LLP+++  L+T++LSQS+VR  V   V+++   S  G+   L+DN+R AY    
Sbjct: 311 LEILQLLLPIIYGVLETVVLSQSYVRTLVGIAVRFIHEPSPGGS--DLEDNSRRAYTTSA 368

Query: 221 LIEILRYLIIVVPDTFVSLDCFPLPSCVCSH 129
           LIE+LRYLI+ VPDTFVSLDCFPLP  V S+
Sbjct: 369 LIEMLRYLILAVPDTFVSLDCFPLPPIVVSY 399


>ref|XP_001776860.1| predicted protein [Physcomitrella patens]
           gi|162671716|gb|EDQ58263.1| predicted protein
           [Physcomitrella patens]
          Length = 2120

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 44/90 (48%), Positives = 65/90 (72%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           ESL+ALE+LLP++ E +D I  SQ H R  ++  +QWLR +  SG+VP+  D+++     
Sbjct: 271 ESLEALELLLPIVLELIDGISSSQIHSRMLIELCLQWLRKLYSSGHVPSTGDSSQNNQVA 330

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCV 138
             L+++L+YL++VVPDTFV+LDCFPLP  V
Sbjct: 331 DTLVKLLQYLLLVVPDTFVALDCFPLPQPV 360


>ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
           gi|567905096|ref|XP_006445036.1| hypothetical protein
           CICLE_v10018441mg [Citrus clementina]
           gi|567905098|ref|XP_006445037.1| hypothetical protein
           CICLE_v10018441mg [Citrus clementina]
           gi|568876055|ref|XP_006491101.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 12-like isoform
           X1 [Citrus sinensis] gi|568876057|ref|XP_006491102.1|
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 12-like isoform X2 [Citrus sinensis]
           gi|557547297|gb|ESR58275.1| hypothetical protein
           CICLE_v10018441mg [Citrus clementina]
           gi|557547298|gb|ESR58276.1| hypothetical protein
           CICLE_v10018441mg [Citrus clementina]
           gi|557547299|gb|ESR58277.1| hypothetical protein
           CICLE_v10018441mg [Citrus clementina]
          Length = 2277

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 45/93 (48%), Positives = 67/93 (72%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           E L+ L+++LP+++  L+T++ SQ++VR+ V     ++R  S  G+   L DN+R AY +
Sbjct: 343 ELLEILQLVLPIIYGVLETVVSSQTYVRSLVGIATHFIREPSPGGS--DLVDNSRRAYTI 400

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCVCSH 129
             L E+LRYLI+ VPDTFV+LDCFPLPSCV S+
Sbjct: 401 SALAEMLRYLILAVPDTFVALDCFPLPSCVVSY 433


>ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
           gi|567905092|ref|XP_006445034.1| hypothetical protein
           CICLE_v10018441mg [Citrus clementina]
           gi|567905100|ref|XP_006445038.1| hypothetical protein
           CICLE_v10018441mg [Citrus clementina]
           gi|568876059|ref|XP_006491103.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 12-like isoform
           X3 [Citrus sinensis] gi|557547295|gb|ESR58273.1|
           hypothetical protein CICLE_v10018441mg [Citrus
           clementina] gi|557547296|gb|ESR58274.1| hypothetical
           protein CICLE_v10018441mg [Citrus clementina]
           gi|557547300|gb|ESR58278.1| hypothetical protein
           CICLE_v10018441mg [Citrus clementina]
          Length = 2239

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 45/93 (48%), Positives = 67/93 (72%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           E L+ L+++LP+++  L+T++ SQ++VR+ V     ++R  S  G+   L DN+R AY +
Sbjct: 305 ELLEILQLVLPIIYGVLETVVSSQTYVRSLVGIATHFIREPSPGGS--DLVDNSRRAYTI 362

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCVCSH 129
             L E+LRYLI+ VPDTFV+LDCFPLPSCV S+
Sbjct: 363 SALAEMLRYLILAVPDTFVALDCFPLPSCVVSY 395


>ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           12-like [Solanum lycopersicum]
          Length = 2262

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 45/93 (48%), Positives = 68/93 (73%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           E L  L++LLPV++ F+DT++LSQS VR  V   +++++  S  G+   L DN+R AY +
Sbjct: 341 ELLGVLQLLLPVVYGFIDTVVLSQSCVRTLVGIALRFIQEPSPGGS--DLVDNSRRAYTM 398

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCVCSH 129
             L+E+LRYL++ VPDTFV+LDCFP+P CV ++
Sbjct: 399 AALVEMLRYLMLAVPDTFVALDCFPMPPCVMTN 431


>ref|XP_006576321.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           12-like isoform X1 [Glycine max]
           gi|571443813|ref|XP_006576322.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 12-like isoform
           X2 [Glycine max]
          Length = 2227

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 46/93 (49%), Positives = 66/93 (70%)
 Frame = -1

Query: 407 ESLDALEMLLPVLFEFLDTIILSQSHVRAFVDAMVQWLRLMSLSGNVPALKDNAREAYNV 228
           E L+  ++LLP+++ FL+TI+LSQS+VR      ++ +R  +  G+   L DN+R AY  
Sbjct: 344 ELLEVWQLLLPIIYGFLETIVLSQSYVRTLAGLALRVIRDPAPGGS--DLVDNSRRAYTA 401

Query: 227 IFLIEILRYLIIVVPDTFVSLDCFPLPSCVCSH 129
             ++E+LRYLI+VVPDTF +LDCFPLPS V SH
Sbjct: 402 YAVVEMLRYLILVVPDTFAALDCFPLPSSVISH 434