BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00025359
         (772 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76390.1| unknown [Picea sitchensis]                             141   2e-31
ref|XP_006852217.1| hypothetical protein AMTR_s00049p00133960 [A...   124   5e-26
ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, part...   123   8e-26
ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr...   122   1e-25
ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci...   120   4e-25
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr...   119   1e-24
ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso...   116   1e-23
ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso...   115   2e-23
gb|EOY05930.1| DNA repair protein XRCC4, putative isoform 1 [The...   114   4e-23
ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like iso...   113   6e-23
ref|XP_002466484.1| hypothetical protein SORBIDRAFT_01g008590 [S...   113   6e-23
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   113   8e-23
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              113   8e-23
tpg|DAA51259.1| TPA: double strand break repair protein [Zea mays]    111   2e-22
ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arab...   111   2e-22
ref|NP_001142226.1| uncharacterized protein LOC100274394 [Zea ma...   111   2e-22
gb|AAC13900.1|AAC13900 T1F9.10 [Arabidopsis thaliana]                 111   3e-22
ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidop...   110   4e-22
dbj|BAD43030.1| putative double strand break repair protein (XRC...   110   4e-22
ref|XP_004981829.1| PREDICTED: DNA repair protein XRCC4-like [Se...   110   7e-22

>gb|ADE76390.1| unknown [Picea sitchensis]
          Length = 334

 Score =  141 bits (356), Expect = 2e-31
 Identities = 99/220 (45%), Positives = 115/220 (52%), Gaps = 21/220 (9%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           N+QKV   ILDFLM+ANT+LS+EVVRKTRSF+RMKVEAEKCL QSEKFKNEK EFE  ++
Sbjct: 117 NEQKVISDILDFLMDANTRLSEEVVRKTRSFDRMKVEAEKCLAQSEKFKNEKAEFETTIF 176

Query: 589 AKFVAVLNSKKAKLRELREK-------SQNLRQQ-XXXXXXXXXXXXXXXXXXXXXXXXX 434
           AKFVAVLNSKKAKLRELREK        +N+R+                           
Sbjct: 177 AKFVAVLNSKKAKLRELREKCLHSEPAKKNVREDASDFSEEETDMESDQNDNEESSAGPT 236

Query: 433 XXXSKTSEDADTTRKLSKSKAYLAGKSKANMDIEEEKPTQKTNTDDAKLQNISEPA---- 266
              SK SE A+  +K  KS     G S A  +   E   +K N+ D K    SEP     
Sbjct: 237 HSDSKDSEGAEINKKPLKS---TGGVSPAPSNKATENRLEKQNSTDEKKNITSEPTDPDA 293

Query: 265 ---------KNLVDEDEXXXXXXXXXXXSNYTSAPKRRRR 173
                        D  E           S YTSAPK+RRR
Sbjct: 294 TQVLGDAEISKDSDHGEPSASAAGLLAVSEYTSAPKKRRR 333


>ref|XP_006852217.1| hypothetical protein AMTR_s00049p00133960 [Amborella trichopoda]
           gi|548855821|gb|ERN13684.1| hypothetical protein
           AMTR_s00049p00133960 [Amborella trichopoda]
          Length = 235

 Score =  124 bits (310), Expect = 5e-26
 Identities = 62/81 (76%), Positives = 71/81 (87%)
 Frame = -1

Query: 772 TNDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDV 593
           ++D+KVT SILDFLMEANT+LSDEVVR TRSFERMKVEAEKCL QSE+F  +K EFE   
Sbjct: 116 SDDKKVTASILDFLMEANTRLSDEVVRNTRSFERMKVEAEKCLAQSERFNIDKAEFESAA 175

Query: 592 YAKFVAVLNSKKAKLRELREK 530
           YAKFVAVLNSKK KLR+LR++
Sbjct: 176 YAKFVAVLNSKKMKLRDLRDR 196


>ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, partial [Citrus clementina]
           gi|557522045|gb|ESR33412.1| hypothetical protein
           CICLE_v10007171mg, partial [Citrus clementina]
          Length = 243

 Score =  123 bits (308), Expect = 8e-26
 Identities = 61/80 (76%), Positives = 70/80 (87%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           N +KVT  ILDFLM+AN +LSDEVV KT+SFER+KVEAEKCL QSE+FKNEK EFE  VY
Sbjct: 102 NSKKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAVY 161

Query: 589 AKFVAVLNSKKAKLRELREK 530
           AKF+ VLNSKK+KLRELR+K
Sbjct: 162 AKFLGVLNSKKSKLRELRDK 181


>ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina]
           gi|557522035|gb|ESR33402.1| hypothetical protein
           CICLE_v10005690mg [Citrus clementina]
          Length = 256

 Score =  122 bits (307), Expect = 1e-25
 Identities = 60/80 (75%), Positives = 70/80 (87%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           N +KVT  ILDFLM+AN +LSDEVV KT+SFER+KVEAEKCL QSE+FKNEK EFE  +Y
Sbjct: 116 NSKKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAIY 175

Query: 589 AKFVAVLNSKKAKLRELREK 530
           AKF+ VLNSKK+KLRELR+K
Sbjct: 176 AKFLGVLNSKKSKLRELRDK 195


>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
          Length = 256

 Score =  120 bits (302), Expect = 4e-25
 Identities = 59/80 (73%), Positives = 69/80 (86%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           N +KVT  ILDFLM+AN +LSDEVV KT+SFER+KVEAEKCL QSE+F NEK EFE  +Y
Sbjct: 115 NSKKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFNNEKLEFESAIY 174

Query: 589 AKFVAVLNSKKAKLRELREK 530
           AKF+ VLNSKK+KLRELR+K
Sbjct: 175 AKFLGVLNSKKSKLRELRDK 194


>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
           gi|557522040|gb|ESR33407.1| hypothetical protein
           CICLE_v10005689mg [Citrus clementina]
          Length = 256

 Score =  119 bits (298), Expect = 1e-24
 Identities = 57/80 (71%), Positives = 69/80 (86%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           N +KVT  ILDFLM+AN +LSDEVV KT+SFER+KVE +KCL QSE+FKNEK EFE  +Y
Sbjct: 115 NSKKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVETQKCLAQSERFKNEKVEFESAIY 174

Query: 589 AKFVAVLNSKKAKLRELREK 530
           +KF+ VLNSKK+KLRELR+K
Sbjct: 175 SKFLGVLNSKKSKLRELRDK 194


>ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum
           tuberosum]
          Length = 267

 Score =  116 bits (290), Expect = 1e-23
 Identities = 58/81 (71%), Positives = 65/81 (80%)
 Frame = -1

Query: 772 TNDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDV 593
           +N +K T  ILDFLM+AN +LSDEVV KT SFERMKVEAEKCL QSEK   EK EFE  +
Sbjct: 116 SNSKKTTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSREKEEFESAI 175

Query: 592 YAKFVAVLNSKKAKLRELREK 530
           YAKF+ VLNSKK KLRELR+K
Sbjct: 176 YAKFLGVLNSKKKKLRELRDK 196


>ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum
           lycopersicum]
          Length = 254

 Score =  115 bits (287), Expect = 2e-23
 Identities = 57/81 (70%), Positives = 65/81 (80%)
 Frame = -1

Query: 772 TNDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDV 593
           +N +K T  ILDFLM+AN +LSDEVV KT SFERMKVEAEKCL QSEK   EK EFE  +
Sbjct: 116 SNSKKTTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSKEKEEFESAI 175

Query: 592 YAKFVAVLNSKKAKLRELREK 530
           YAKF+ VLN+KK KLRELR+K
Sbjct: 176 YAKFLGVLNAKKKKLRELRDK 196


>gb|EOY05930.1| DNA repair protein XRCC4, putative isoform 1 [Theobroma cacao]
          Length = 263

 Score =  114 bits (285), Expect = 4e-23
 Identities = 55/80 (68%), Positives = 69/80 (86%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           + QK+T  ILDFLM+AN +LS+EV RKT+SFE++KVEAEKCL QSE+  NEK EFE ++Y
Sbjct: 120 DSQKITGGILDFLMDANIRLSEEVFRKTQSFEKLKVEAEKCLEQSERSTNEKMEFESEIY 179

Query: 589 AKFVAVLNSKKAKLRELREK 530
           AKF+ VLNSKKAKLRELR++
Sbjct: 180 AKFLGVLNSKKAKLRELRDQ 199


>ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Fragaria vesca
           subsp. vesca]
          Length = 259

 Score =  113 bits (283), Expect = 6e-23
 Identities = 55/80 (68%), Positives = 67/80 (83%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           N ++ T ++LDFLM+AN  LS+EVVRKT+SFER+KVEAE CL+QSE+  NEK EFE  VY
Sbjct: 120 NSKETTAAVLDFLMDANVGLSEEVVRKTQSFERLKVEAEMCLIQSERIANEKIEFESAVY 179

Query: 589 AKFVAVLNSKKAKLRELREK 530
           AKF+ VLNSKK KLRELR+K
Sbjct: 180 AKFLGVLNSKKTKLRELRDK 199


>ref|XP_002466484.1| hypothetical protein SORBIDRAFT_01g008590 [Sorghum bicolor]
           gi|241920338|gb|EER93482.1| hypothetical protein
           SORBIDRAFT_01g008590 [Sorghum bicolor]
          Length = 283

 Score =  113 bits (283), Expect = 6e-23
 Identities = 55/80 (68%), Positives = 68/80 (85%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           N Q+    ILDFLM+AN +LS+EVVRKT+SF+++K EAEKCL QSE+F NEKTEFE   +
Sbjct: 130 NTQQTISEILDFLMDANIRLSEEVVRKTQSFDKLKQEAEKCLQQSERFNNEKTEFEQATF 189

Query: 589 AKFVAVLNSKKAKLRELREK 530
           +KFVAVLNSKKAKLR+LR+K
Sbjct: 190 SKFVAVLNSKKAKLRQLRDK 209


>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  113 bits (282), Expect = 8e-23
 Identities = 55/80 (68%), Positives = 66/80 (82%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           + +  T  +LDFLM AN +LS+EVV KT+SFER+KVEAEKCL QSEKF NEK EFE  +Y
Sbjct: 117 DSRSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIY 176

Query: 589 AKFVAVLNSKKAKLRELREK 530
           AKF+ VLNSKKAKLRELR++
Sbjct: 177 AKFLGVLNSKKAKLRELRDQ 196


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  113 bits (282), Expect = 8e-23
 Identities = 55/80 (68%), Positives = 66/80 (82%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           + +  T  +LDFLM AN +LS+EVV KT+SFER+KVEAEKCL QSEKF NEK EFE  +Y
Sbjct: 117 DSRSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIY 176

Query: 589 AKFVAVLNSKKAKLRELREK 530
           AKF+ VLNSKKAKLRELR++
Sbjct: 177 AKFLGVLNSKKAKLRELRDQ 196


>tpg|DAA51259.1| TPA: double strand break repair protein [Zea mays]
          Length = 290

 Score =  111 bits (278), Expect = 2e-22
 Identities = 54/80 (67%), Positives = 67/80 (83%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           N Q+    ILDFLM+AN +LS+EVVRKT+SF+++K EAEKCL QSE+F NEK EFE   +
Sbjct: 130 NTQQTISEILDFLMDANIRLSEEVVRKTQSFDKLKQEAEKCLQQSERFNNEKAEFEQAAF 189

Query: 589 AKFVAVLNSKKAKLRELREK 530
           +KFVAVLNSKKAKLR+LR+K
Sbjct: 190 SKFVAVLNSKKAKLRQLRDK 209


>ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arabidopsis lyrata subsp.
           lyrata] gi|297329239|gb|EFH59658.1| hypothetical protein
           ARALYDRAFT_479818 [Arabidopsis lyrata subsp. lyrata]
          Length = 248

 Score =  111 bits (278), Expect = 2e-22
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           + +K+T  ILDFL+EAN +LS+EVV KTRSFE+MK EAE+CL Q EK   EKTEFE+  Y
Sbjct: 118 DSKKITVGILDFLLEANIRLSEEVVNKTRSFEKMKCEAERCLAQGEKLCEEKTEFENATY 177

Query: 589 AKFVAVLNSKKAKLRELREKSQNLR 515
           AKF++VLN+KKAKLR LR+K  ++R
Sbjct: 178 AKFLSVLNAKKAKLRALRDKGDSVR 202


>ref|NP_001142226.1| uncharacterized protein LOC100274394 [Zea mays]
           gi|194707700|gb|ACF87934.1| unknown [Zea mays]
           gi|195612486|gb|ACG28073.1| double strand break repair
           protein [Zea mays]
          Length = 290

 Score =  111 bits (278), Expect = 2e-22
 Identities = 54/80 (67%), Positives = 67/80 (83%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           N Q+    ILDFLM+AN +LS+EVVRKT+SF+++K EAEKCL QSE+F NEK EFE   +
Sbjct: 130 NTQQTISEILDFLMDANIRLSEEVVRKTQSFDKLKQEAEKCLQQSERFNNEKAEFEQAAF 189

Query: 589 AKFVAVLNSKKAKLRELREK 530
           +KFVAVLNSKKAKLR+LR+K
Sbjct: 190 SKFVAVLNSKKAKLRQLRDK 209


>gb|AAC13900.1|AAC13900 T1F9.10 [Arabidopsis thaliana]
          Length = 222

 Score =  111 bits (277), Expect = 3e-22
 Identities = 54/85 (63%), Positives = 70/85 (82%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           + +K+T  ILDFLMEAN +LS+EVV KTRSFE+MK EAE+CL Q EK  +EKTEFE+  Y
Sbjct: 92  DSKKITVRILDFLMEANIRLSEEVVNKTRSFEKMKSEAERCLAQGEKLCDEKTEFENATY 151

Query: 589 AKFVAVLNSKKAKLRELREKSQNLR 515
           AKF++VLN+KKAKLR +R+K  ++R
Sbjct: 152 AKFLSVLNAKKAKLRAVRDKEDSVR 176


>ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidopsis thaliana]
           gi|238479872|ref|NP_001154639.1| DNA repair protein
           XRCC4-like protein [Arabidopsis thaliana]
           gi|85701292|sp|Q682V0.2|XRCC4_ARATH RecName: Full=DNA
           repair protein XRCC4 gi|9800643|gb|AAF91285.2|AF233528_1
           putative double strand break repair protein [Arabidopsis
           thaliana] gi|9294200|dbj|BAB02102.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332643196|gb|AEE76717.1| DNA repair protein
           XRCC4-like protein [Arabidopsis thaliana]
           gi|332643197|gb|AEE76718.1| DNA repair protein
           XRCC4-like protein [Arabidopsis thaliana]
          Length = 264

 Score =  110 bits (276), Expect = 4e-22
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           + +K+T  ILDFLMEAN +LS+EVV KTRSFE+M+ EAE+CL Q EK  +EKTEFE   Y
Sbjct: 134 DSKKITVGILDFLMEANIRLSEEVVNKTRSFEKMRSEAERCLAQGEKLCDEKTEFESATY 193

Query: 589 AKFVAVLNSKKAKLRELREKSQNLR 515
           AKF++VLN+KKAKLR LR+K  ++R
Sbjct: 194 AKFLSVLNAKKAKLRALRDKEDSVR 218


>dbj|BAD43030.1| putative double strand break repair protein (XRCC4) [Arabidopsis
           thaliana] gi|56461768|gb|AAV91340.1| At1g61410
           [Arabidopsis thaliana] gi|61656135|gb|AAX49370.1|
           At1g61410 [Arabidopsis thaliana]
          Length = 248

 Score =  110 bits (276), Expect = 4e-22
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           + +K+T  ILDFLMEAN +LS+EVV KTRSFE+M+ EAE+CL Q EK  +EKTEFE   Y
Sbjct: 118 DSKKITVGILDFLMEANIRLSEEVVNKTRSFEKMRSEAERCLAQGEKLCDEKTEFESATY 177

Query: 589 AKFVAVLNSKKAKLRELREKSQNLR 515
           AKF++VLN+KKAKLR LR+K  ++R
Sbjct: 178 AKFLSVLNAKKAKLRALRDKEDSVR 202


>ref|XP_004981829.1| PREDICTED: DNA repair protein XRCC4-like [Setaria italica]
          Length = 281

 Score =  110 bits (274), Expect = 7e-22
 Identities = 54/84 (64%), Positives = 67/84 (79%)
 Frame = -1

Query: 769 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKFKNEKTEFEHDVY 590
           N Q+    ILDFLM+AN +LS+EVVRKT+SF+++K EAEKCL QSE+F NEK EFE   +
Sbjct: 131 NAQQTISEILDFLMDANIRLSEEVVRKTQSFDKLKQEAEKCLQQSERFNNEKAEFEQATF 190

Query: 589 AKFVAVLNSKKAKLRELREKSQNL 518
           +KFVAVLNSKK KLR+LR+K   L
Sbjct: 191 SKFVAVLNSKKTKLRQLRDKVAEL 214