BLASTX nr result
ID: Ephedra25_contig00025163
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00025163
(525 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006446259.1| hypothetical protein CICLE_v10014446mg [Citr... 146 2e-33
ref|XP_006470740.1| PREDICTED: pentatricopeptide repeat-containi... 146 3e-33
gb|ABR17838.1| unknown [Picea sitchensis] 144 9e-33
ref|XP_006391071.1| hypothetical protein EUTSA_v10019713mg [Eutr... 142 4e-32
ref|XP_004308660.1| PREDICTED: pentatricopeptide repeat-containi... 142 4e-32
ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat... 141 1e-31
ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea ma... 140 2e-31
ref|NP_188975.3| pentatricopeptide repeat-containing protein [Ar... 140 2e-31
ref|XP_002883423.1| pentatricopeptide repeat-containing protein ... 139 3e-31
ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [S... 139 4e-31
ref|NP_177059.1| pentatricopeptide repeat-containing protein [Ar... 139 5e-31
gb|EMJ15466.1| hypothetical protein PRUPE_ppa025121mg [Prunus pe... 138 7e-31
gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis] 137 1e-30
ref|XP_006301711.1| hypothetical protein CARUB_v10022169mg [Caps... 137 1e-30
ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, part... 137 2e-30
ref|XP_002887214.1| pentatricopeptide repeat-containing protein ... 137 2e-30
ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat... 136 3e-30
ref|XP_002527042.1| pentatricopeptide repeat-containing protein,... 136 3e-30
ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Caps... 136 3e-30
ref|XP_002514567.1| pentatricopeptide repeat-containing protein,... 136 3e-30
>ref|XP_006446259.1| hypothetical protein CICLE_v10014446mg [Citrus clementina]
gi|557548870|gb|ESR59499.1| hypothetical protein
CICLE_v10014446mg [Citrus clementina]
Length = 705
Score = 146 bits (369), Expect = 2e-33
Identities = 70/173 (40%), Positives = 103/173 (59%)
Frame = +2
Query: 2 CVEALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGA 181
CVE F M G T SSV+ +C R G L+ + +HG++ R + VF+ +
Sbjct: 278 CVE---LFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSS 334
Query: 182 LIDAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPS 361
LID Y K R+ AEN+F ++ + DV WN MI GY G ++KAL ++++M + P
Sbjct: 335 LIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPD 394
Query: 362 LISVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ S+LPAC LA L++G EIHNH ++ LE+ +V AL+DMYAKCG +D
Sbjct: 395 AVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVD 447
Score = 114 bits (286), Expect = 1e-23
Identities = 55/170 (32%), Positives = 97/170 (57%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
+AL F+ M+ SGF N T ++V+++C RL L + +E+H + GF S +++ AL+
Sbjct: 176 KALELFKKMRDSGFQPNSVTLTTVVSSCARLMDLERGKEIHKEFIKDGFVSDSYISSALV 235
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y K LE A +F + K V WN++I GY+ G +++F M P+L
Sbjct: 236 DMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVELFWRMNEEGIKPTLT 295
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDI 517
+++S+L +C LK G +H + ++ ++ +V + ++LID+Y KCG +
Sbjct: 296 TISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRV 345
Score = 112 bits (279), Expect = 7e-23
Identities = 54/153 (35%), Positives = 92/153 (60%)
Frame = +2
Query: 62 FTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFYR 241
+T+ SV+ ACG LGS+ + +H H+ + GF V +A + Y+K N E A +F
Sbjct: 93 YTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDE 152
Query: 242 LKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASILPACIDLAGLKRG 421
+ ++DV WN++I Y Q G+ KAL++F +M P+ +++ +++ +C L L+RG
Sbjct: 153 MSERDVASWNTVISCYYQDGQAEKALELFKKMRDSGFQPNSVTLTTVVSSCARLMDLERG 212
Query: 422 MEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
EIH +K G S+ +++AL+DMY KCG ++
Sbjct: 213 KEIHKEFIKDGFVSDSYISSALVDMYGKCGCLE 245
Score = 98.2 bits (243), Expect = 1e-18
Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
+AL + M+ G + TF+SV+ AC +L +L + +E+H H+ E++ V GAL+
Sbjct: 378 KALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALL 437
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y+K ++EA +FY L ++D+ W SMI Y GR +AL++F EM + + P I
Sbjct: 438 DMYAKCGAVDEAFKVFYELPERDLVSWTSMITAYGSHGRALEALKLFGEMQQSNARPDSI 497
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKR-GLESEVVVANALIDMYAKCG 511
+ ++L AC + G N + ++ + LID+ + G
Sbjct: 498 TFLAVLSACSHAGWVDEGGYYFNQMISEYNIKPRNEHYSCLIDLLGRAG 546
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Frame = +2
Query: 104 SLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFYRLKQK-DVGLWNSMI 280
SL++ + +H V G ++++ + +LI+ Y + A +F + D+ LWN ++
Sbjct: 4 SLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDCAMLVFKTIDNPLDLSLWNGLM 63
Query: 281 VGYTQGGRFYKALQVFAEMIRL-HENPSLISVASILPACIDLAGLKRGMEIHNHALKRGL 457
YT+ + AL++F +++ + P + S+L AC L + G IH H +K G
Sbjct: 64 ASYTKNYMYINALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGF 123
Query: 458 ESEVVVANALIDMYAKCGDID 520
+VV+A++ MYAKC +
Sbjct: 124 LLDVVIASSTAGMYAKCNSFE 144
>ref|XP_006470740.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Citrus sinensis]
Length = 694
Score = 146 bits (368), Expect = 3e-33
Identities = 70/173 (40%), Positives = 103/173 (59%)
Frame = +2
Query: 2 CVEALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGA 181
CVE F M G T SSV+ +C R G L+ + +HG++ R + VF+ +
Sbjct: 292 CVE---LFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVVHGYIIRNKIQGDVFINSS 348
Query: 182 LIDAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPS 361
LID Y K R+ AEN+F ++ + DV WN MI GY G ++KAL ++++M + P
Sbjct: 349 LIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPD 408
Query: 362 LISVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ S+LPAC LA L++G EIHNH ++ LE+ +V AL+DMYAKCG +D
Sbjct: 409 AVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVD 461
Score = 113 bits (282), Expect = 3e-23
Identities = 55/170 (32%), Positives = 96/170 (56%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
+AL F+ M+ SG N T ++VI++C RL L + +E+H + GF S +++ AL+
Sbjct: 190 KALELFKKMRDSGVQPNSVTLTTVISSCARLMDLERGKEIHKEFIKDGFVSDSYISSALV 249
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y K LE A +F + K V WN++I GY+ G +++F M P+L
Sbjct: 250 DMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVELFWRMNEEGIKPTLT 309
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDI 517
+++S+L +C LK G +H + ++ ++ +V + ++LID+Y KCG +
Sbjct: 310 TISSVLMSCSRSGQLKHGKVVHGYIIRNKIQGDVFINSSLIDLYFKCGRV 359
Score = 112 bits (281), Expect = 4e-23
Identities = 54/153 (35%), Positives = 92/153 (60%)
Frame = +2
Query: 62 FTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFYR 241
+T+ SV+ ACG LGS+ + +H H+ + GF V +A + Y+K N E A +F
Sbjct: 107 YTYPSVLKACGGLGSVAIGKMIHTHLIKTGFLLDVVIASSTARMYAKCNSFECAVKMFDE 166
Query: 242 LKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASILPACIDLAGLKRG 421
+ ++DV WN++I Y Q G+ KAL++F +M P+ +++ +++ +C L L+RG
Sbjct: 167 MSERDVASWNTVISCYYQDGQAEKALELFKKMRDSGVQPNSVTLTTVISSCARLMDLERG 226
Query: 422 MEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
EIH +K G S+ +++AL+DMY KCG ++
Sbjct: 227 KEIHKEFIKDGFVSDSYISSALVDMYGKCGCLE 259
Score = 94.4 bits (233), Expect = 1e-17
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
+AL + M+ G + TF+SV+ AC +L +L + +E+H H+ E++ V GAL+
Sbjct: 392 KALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALL 451
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y+K ++EA +F L ++D+ W SMI Y GR +AL++F EM + + P I
Sbjct: 452 DMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSI 511
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKR-GLESEVVVANALIDMYAKCG 511
+ ++L AC + G N + ++ + LID+ + G
Sbjct: 512 TFLALLSACSHAGWVDEGGYYFNQMISEYNIKPRNEHYSCLIDLLGRAG 560
Score = 72.8 bits (177), Expect = 4e-11
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Frame = +2
Query: 74 SVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFYRLKQK 253
+++ C SL++ + +H V G ++++ + +LI+ Y + A +F +
Sbjct: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
Query: 254 -DVGLWNSMIVGYTQGGRFYKALQVFAEMIRL-HENPSLISVASILPACIDLAGLKRGME 427
D+ LWN ++ YT+ + AL++F +++ + P + S+L AC L + G
Sbjct: 68 LDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVAIGKM 127
Query: 428 IHNHALKRGLESEVVVANALIDMYAKCGDID 520
IH H +K G +VV+A++ MYAKC +
Sbjct: 128 IHTHLIKTGFLLDVVIASSTARMYAKCNSFE 158
>gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 144 bits (364), Expect = 9e-33
Identities = 69/171 (40%), Positives = 104/171 (60%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EAL FF MQ G N T SV+ AC L +L Q +++HG+ R GFES+ V AL+
Sbjct: 305 EALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALV 364
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
+ Y+K + A +F R+ +K+V WN++I GY+Q G ++AL +F EM P
Sbjct: 365 NMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSF 424
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ S+LPAC L++G +IH + ++ G ES VVV L+D+YAKCG+++
Sbjct: 425 AIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVN 475
Score = 143 bits (360), Expect = 3e-32
Identities = 69/171 (40%), Positives = 109/171 (63%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
+AL + MQ +G + + F SVI ACG L+ R++H + RGFES V V AL
Sbjct: 103 KALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALA 162
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
Y+K LE A +F R+ ++DV WN++I GY+Q G+ Y+AL +F+EM P+
Sbjct: 163 SMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSS 222
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ S++P C L L++G +IH +A++ G+ES+V+V N L++MYAKCG+++
Sbjct: 223 TLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVN 273
Score = 134 bits (336), Expect = 2e-29
Identities = 66/171 (38%), Positives = 101/171 (59%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EAL F MQ +G N T SV+ C L +L Q +++H + R G ES V V L+
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLV 263
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
+ Y+K + A +F R+ +DV WN++I GY+ + ++AL F M P+ I
Sbjct: 264 NMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSI 323
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ S+LPAC L L++G +IH +A++ G ES VV NAL++MYAKCG+++
Sbjct: 324 TMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVN 374
Score = 91.7 bits (226), Expect = 9e-17
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EAL F MQ G + F SV+ AC +L Q +++HG+ R GFES+V V L+
Sbjct: 406 EALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLV 465
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y+K + A+ +F R+ ++DV W +MI+ Y G AL +F++M I
Sbjct: 466 DIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHI 525
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKR--GLESEVVVANALIDMYAKCGDID 520
+ +IL AC + +G++ + +K GL ++ L+D+ + G +D
Sbjct: 526 AFTAILTACSHAGLVDQGLQ-YFQCMKSDYGLAPKLEHYACLVDLLGRAGHLD 577
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/86 (36%), Positives = 51/86 (59%)
Frame = +2
Query: 263 LWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASILPACIDLAGLKRGMEIHNHA 442
+W I+GY + G + KAL+++ +M R NP + S++ AC + L+ G ++H
Sbjct: 87 VWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDI 146
Query: 443 LKRGLESEVVVANALIDMYAKCGDID 520
+ RG ES+V+V AL MY KCG ++
Sbjct: 147 IARGFESDVIVGTALASMYTKCGSLE 172
>ref|XP_006391071.1| hypothetical protein EUTSA_v10019713mg [Eutrema salsugineum]
gi|557087505|gb|ESQ28357.1| hypothetical protein
EUTSA_v10019713mg [Eutrema salsugineum]
Length = 743
Score = 142 bits (359), Expect = 4e-32
Identities = 65/171 (38%), Positives = 107/171 (62%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F+ M+ G + +TF SV+ ACG LG++++ +++H + R + HV+V ALI
Sbjct: 253 EAIELFREMKSEGLTIDQYTFGSVLPACGELGAIKEGKQIHASIIRSNLQDHVYVGSALI 312
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y K ++ A+ +F R+KQK+V W +M+VGY Q GR +A+++F +M R +P
Sbjct: 313 DMYCKCKCIDYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ + AC ++A L+ G + H A+ GL V V+N+L+ +Y KCGDID
Sbjct: 373 TLGQAISACANIASLEEGSQFHGKAIISGLVHYVTVSNSLVTLYGKCGDID 423
Score = 90.1 bits (222), Expect = 3e-16
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 30/183 (16%)
Frame = +2
Query: 65 TFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFYRL 244
T +++ G + +++H V +RGFES++ V L+D Y+K+ + +A+ +FY L
Sbjct: 141 TLMTMLKLSSTNGHVGLGKQIHVQVIKRGFESYLLVGSPLLDMYAKAGFISDAKKVFYGL 200
Query: 245 K------------------------------QKDVGLWNSMIVGYTQGGRFYKALQVFAE 334
+KD W +MI G Q G +A+++F E
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIKDAQQLFQGMEKDSVSWTAMIQGLAQNGLEKEAIELFRE 260
Query: 335 MIRLHENPSLISVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGD 514
M + S+LPAC +L +K G +IH ++ L+ V V +ALIDMY KC
Sbjct: 261 MKSEGLTIDQYTFGSVLPACGELGAIKEGKQIHASIIRSNLQDHVYVGSALIDMYCKCKC 320
Query: 515 IDF 523
ID+
Sbjct: 321 IDY 323
Score = 76.3 bits (186), Expect = 4e-12
Identities = 40/172 (23%), Positives = 84/172 (48%), Gaps = 1/172 (0%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F MQ SG + +T I+AC + SL + + HG G +V V+ +L+
Sbjct: 354 EAVKIFLDMQRSGIDPDHYTLGQAISACANIASLEEGSQFHGKAIISGLVHYVTVSNSLV 413
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
Y K ++++ IF + +DV + +M+ Y Q G+ +A+ +F M++ P +
Sbjct: 414 TLYGKCGDIDDSVRIFNEMNVRDVVSYTAMVSAYAQFGKAMEAIHLFDRMVQHGLKPDGV 473
Query: 368 SVASILPACIDLAGLKRGMEIHNHAL-KRGLESEVVVANALIDMYAKCGDID 520
+ ++ AC +++G + + G+ + +ID++++ G ++
Sbjct: 474 TFTGVISACSRAGLVEKGQRYFELMIDEHGIVPSSGHYSCMIDLFSRSGRLE 525
Score = 63.2 bits (152), Expect = 4e-08
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Frame = +2
Query: 68 FSSVIAACGRLGSLRQAREL---HGHV---------------------------SRRGFE 157
+S+ I C G+ Q+R L HGH+ +RR F+
Sbjct: 6 YSAQIKQCIESGARSQSRHLKTIHGHIIKTLSIVETILLNNIVHGYAKTRNSTYARRVFD 65
Query: 158 S----HVFVAGALIDAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQV 325
+ F L+ AYS+S L E E F R+ +D WN +I GY+ G A++
Sbjct: 66 EIPKPNPFSWNNLLMAYSQSGHLSEMERTFERIPIRDGVTWNLLISGYSLTGLVGAAVKA 125
Query: 326 FAEMIRLHENP-SLISVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYA 502
+ M+R +++ ++L + G +IH +KRG ES ++V + L+DMYA
Sbjct: 126 YNTMMRDGSGDLKRVTLMTMLKLSSTNGHVGLGKQIHVQVIKRGFESYLLVGSPLLDMYA 185
Query: 503 KCGDI 517
K G I
Sbjct: 186 KAGFI 190
>ref|XP_004308660.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Fragaria vesca subsp. vesca]
Length = 706
Score = 142 bits (359), Expect = 4e-32
Identities = 68/171 (39%), Positives = 108/171 (63%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
+AL F+ M FSG + +TF VI ACG +G+LR+ +++H + + GFE V++ AL+
Sbjct: 300 KALDLFRDMHFSGIMPSQYTFVGVINACGDIGALREGQQVHSFLLKMGFEGQVYIMSALV 359
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y+K R+ +A N F +K+ DV LW SMI GY Q G + AL ++ M + P+ +
Sbjct: 360 DMYAKCGRVADARNGFEYIKEPDVVLWTSMIGGYVQNGEYEAALGLYCRMHKEGIMPNKL 419
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++AS+L AC +L+ ++G +IH +K G EV + +AL MYAKCG+++
Sbjct: 420 TMASVLKACSNLSSFEQGKQIHARTIKYGFSLEVPIGSALSTMYAKCGNLE 470
Score = 98.6 bits (244), Expect = 8e-19
Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHA--NPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGA 181
EA+ F+ M+ S + N F +SV++A + +++H + G S V V A
Sbjct: 197 EAVEVFRLMRRSEENEGENEFVLTSVVSALAVREFVDTGKQIHCVAVKNGLMSFVSVGNA 256
Query: 182 LIDAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPS 361
L+ Y K L++A F K+ W++MI G+ Q G +KAL +F +M PS
Sbjct: 257 LVTMYGKCGSLDDALRTFELSGDKNSITWSAMICGFGQSGDSHKALDLFRDMHFSGIMPS 316
Query: 362 LISVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDI 517
+ ++ AC D+ L+ G ++H+ LK G E +V + +AL+DMYAKCG +
Sbjct: 317 QYTFVGVINACGDIGALREGQQVHSFLLKMGFEGQVYIMSALVDMYAKCGRV 368
Score = 88.2 bits (217), Expect = 1e-15
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Frame = +2
Query: 11 ALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALID 190
AL + M G N T +SV+ AC L S Q +++H + GF V + AL
Sbjct: 402 ALGLYCRMHKEGIMPNKLTMASVLKACSNLSSFEQGKQIHARTIKYGFSLEVPIGSALST 461
Query: 191 AYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLIS 370
Y+K LE+ +F R+ +DV WN +I G +Q GR +AL +F EM P ++
Sbjct: 462 MYAKCGNLEDGNLVFRRMPVRDVVAWNGIISGLSQNGRGTEALDLFEEMRLGETKPDYVT 521
Query: 371 VASILPACIDLAGLKRGMEIHNHALKR-GLESEVVVANALIDMYAKCGDID 520
++L AC + ++RG G+ V ++D+ ++ G +D
Sbjct: 522 FVNVLSACSHMGFVERGWIYFKMMYDEFGIAPRVEHYACMVDVLSRAGRLD 572
Score = 78.6 bits (192), Expect = 8e-13
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Frame = +2
Query: 23 FQTMQFSGFHANPFTFSSVI-AACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYS 199
F+ M+ N TF+ V AA + R +H V + VFV L++ Y
Sbjct: 100 FRRMRAENTSPNSHTFAGVFTAASSEASDVLGGRHVHAVVIKDVRSFDVFVGSCLVNMYC 159
Query: 200 KSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHEN--PSLISV 373
K + +A +F R+ +++ W +MI GY +A++VF M R EN + +
Sbjct: 160 KMGLVGDARKVFDRMSERNSVSWATMISGYAMQRMAGEAVEVFRLMRRSEENEGENEFVL 219
Query: 374 ASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
S++ A + G +IH A+K GL S V V NAL+ MY KCG +D
Sbjct: 220 TSVVSALAVREFVDTGKQIHCVAVKNGLMSFVSVGNALVTMYGKCGSLD 268
>ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3|
unnamed protein product [Vitis vinifera]
Length = 743
Score = 141 bits (355), Expect = 1e-31
Identities = 70/171 (40%), Positives = 107/171 (62%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EAL F+ M+ +GF + FTF SV+ ACG L +L + +++H +V R + +VFV AL+
Sbjct: 253 EALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALV 312
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D YSK ++ AE +F R+ QK+V W +M+VGY Q G +A+++F EM R P
Sbjct: 313 DMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDF 372
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ S++ +C +LA L+ G + H AL GL S + V+NALI +Y KCG +
Sbjct: 373 TLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTE 423
Score = 87.8 bits (216), Expect = 1e-15
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 32/204 (15%)
Frame = +2
Query: 2 CVEALYFFQTM-QFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAG 178
C +A+ ++ M + + + N TFS+++ C + + R+++G + + GF S VFV
Sbjct: 118 CSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGS 177
Query: 179 ALIDAYSK-------------------------------SNRLEEAENIFYRLKQKDVGL 265
L+D Y+K +EE++ +F LK++D
Sbjct: 178 PLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSIS 237
Query: 266 WNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASILPACIDLAGLKRGMEIHNHAL 445
W MI G Q G +AL +F EM + S+L AC L L G +IH + +
Sbjct: 238 WTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVI 297
Query: 446 KRGLESEVVVANALIDMYAKCGDI 517
+ + V V +AL+DMY+KC I
Sbjct: 298 RTDHKDNVFVGSALVDMYSKCRSI 321
Score = 80.1 bits (196), Expect = 3e-13
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 1/172 (0%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F MQ +G + FT SVI++C L SL + + H G S + V+ ALI
Sbjct: 354 EAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALI 413
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
Y K E + +F + +D W +++ GY Q G+ + + +F M+ P +
Sbjct: 414 TLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGV 473
Query: 368 SVASILPACIDLAGLKRGMEIHNHALK-RGLESEVVVANALIDMYAKCGDID 520
+ +L AC +++G++ +K G+ V +ID+ + G ++
Sbjct: 474 TFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLE 525
Score = 65.5 bits (158), Expect = 7e-09
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Frame = +2
Query: 62 FTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFYR 241
F +++I A +LG+L A + H+ + ++F ++ YSK L + + IF
Sbjct: 41 FLSNNLITAYYKLGNLAYAHHVFDHIP----QPNLFSWNTILSVYSKLGLLSQMQQIFNL 96
Query: 242 LKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIR-LHENPSLISVASILPACIDLAGLKR 418
+ +D WN I GY G A++V+ M++ N + I+ +++L C +
Sbjct: 97 MPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDL 156
Query: 419 GMEIHNHALKRGLESEVVVANALIDMYAKCG 511
G +I+ LK G S+V V + L+DMY K G
Sbjct: 157 GRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
>ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein
ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 140 bits (353), Expect = 2e-31
Identities = 66/171 (38%), Positives = 108/171 (63%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
+AL FF+ M+F G + +TF S++ ACG L +L Q +++H ++ R ++ +VFV AL+
Sbjct: 255 QALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALV 314
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D YSK ++ AE F R+ K++ W ++IVGY Q G +A++VF+EM R +P
Sbjct: 315 DMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDF 374
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ S++ +C +LA L+ G + H AL GL + V+NAL+ +Y KCG I+
Sbjct: 375 TLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIE 425
Score = 80.5 bits (197), Expect = 2e-13
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F MQ G + FT SVI++C L SL + + H G ++ V+ AL+
Sbjct: 356 EAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALV 415
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
Y K +E+A +F + D W +++ GY Q GR + + +F +M+ P +
Sbjct: 416 TLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGV 475
Query: 368 SVASILPACIDLAGLKRGME-IHNHALKRGLESEVVVANALIDMYAKCG 511
+ +L AC +++G H+ G+ +ID+Y++ G
Sbjct: 476 TFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSG 524
Score = 79.3 bits (194), Expect = 5e-13
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 33/202 (16%)
Frame = +2
Query: 11 ALYFFQTMQFSGFHANP--FTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGAL 184
A+ + T+ +G P T S+++ A LG R+ H + R GF + FV L
Sbjct: 122 AVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPL 181
Query: 185 IDAYSKSNRL-------------------------------EEAENIFYRLKQKDVGLWN 271
+ Y+K + EEA +F + +D W
Sbjct: 182 VGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWT 241
Query: 272 SMIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASILPACIDLAGLKRGMEIHNHALKR 451
+M+ G+TQ G +AL F M + SIL AC L+ L++G +IH + ++
Sbjct: 242 TMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT 301
Query: 452 GLESEVVVANALIDMYAKCGDI 517
+ V V +AL+DMY+KC I
Sbjct: 302 HYDDNVFVGSALVDMYSKCRSI 323
>ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At3g23330 gi|11994318|dbj|BAB02277.1| unnamed
protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 140 bits (352), Expect = 2e-31
Identities = 63/170 (37%), Positives = 108/170 (63%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
+AL + M + + FT SSV+ + + +E+HG+V R+G +S V++ +L+
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y+KS R+E++E +F RL +D WNS++ GY Q GR+ +AL++F +M+ P +
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDI 517
+ +S++PAC LA L G ++H + L+ G S + +A+AL+DMY+KCG+I
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNI 394
Score = 99.0 bits (245), Expect = 6e-19
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EAL F+ M + FSSVI AC L +L ++LHG+V R GF S++F+A AL+
Sbjct: 326 EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALV 385
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D YSK ++ A IF R+ D W ++I+G+ G ++A+ +F EM R P+ +
Sbjct: 386 DMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQV 445
Query: 368 SVASILPACIDLAGLKRGMEIHNHALK-RGLESEVVVANALIDMYAKCGDID 520
+ ++L AC + + N K GL E+ A+ D+ + G ++
Sbjct: 446 AFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Score = 87.4 bits (215), Expect = 2e-15
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 36/207 (17%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
+AL F M+ SG + F SV+ +C + LR +HG + R G + ++ AL+
Sbjct: 88 KALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALM 147
Query: 188 DAYSK---------------------SNR---------------LEEAENIFYRLKQKDV 259
+ Y+K SN ++ +F + +KDV
Sbjct: 148 NMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDV 207
Query: 260 GLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASILPACIDLAGLKRGMEIHNH 439
+N++I GY Q G + AL++ EM P +++S+LP + + +G EIH +
Sbjct: 208 VSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGY 267
Query: 440 ALKRGLESEVVVANALIDMYAKCGDID 520
+++G++S+V + ++L+DMYAK I+
Sbjct: 268 VIRKGIDSDVYIGSSLVDMYAKSARIE 294
Score = 68.9 bits (167), Expect = 6e-10
Identities = 45/137 (32%), Positives = 66/137 (48%)
Frame = +2
Query: 95 RLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFYRLKQKDVGLWNS 274
R+ S QA++LH R SH A +I Y+ L EA +F LK V W S
Sbjct: 17 RIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKS 75
Query: 275 MIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASILPACIDLAGLKRGMEIHNHALKRG 454
+I +T F KAL F EM P S+L +C + L+ G +H ++ G
Sbjct: 76 VIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 455 LESEVVVANALIDMYAK 505
++ ++ NAL++MYAK
Sbjct: 136 MDCDLYTGNALMNMYAK 152
>ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329263|gb|EFH59682.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 679
Score = 139 bits (351), Expect = 3e-31
Identities = 62/170 (36%), Positives = 107/170 (62%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
+AL + M S + FT SSV+ + + +E+HG+V R+G +S V++ +L+
Sbjct: 189 DALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLV 248
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y+KS R+E++E +F L ++D WNS++ GY Q GR+ +AL++F +M+ P +
Sbjct: 249 DMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAV 308
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDI 517
+ +S++PAC LA L G ++H + L+ G + +A+AL+DMY+KCG+I
Sbjct: 309 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNI 358
Score = 105 bits (261), Expect = 8e-21
Identities = 53/170 (31%), Positives = 95/170 (55%)
Frame = +2
Query: 11 ALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALID 190
AL F M+ SG + F SV+ +C + LR +HG + R G + ++ AL++
Sbjct: 89 ALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMN 148
Query: 191 AYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLIS 370
YSK ++ +F + +KDV +N++I GY Q G + AL++ EM P +
Sbjct: 149 MYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFT 208
Query: 371 VASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++S+LP + + +G EIH + +++G++S+V + ++L+DMYAK I+
Sbjct: 209 LSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 258
Score = 98.2 bits (243), Expect = 1e-18
Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EAL F+ M + FSSVI AC L +L ++LHG+V R GF ++F+A AL+
Sbjct: 290 EALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALV 349
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D YSK ++ A IF R+ D W ++I+G+ G ++A+ +F EM R P+ +
Sbjct: 350 DMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQV 409
Query: 368 SVASILPACIDLAGLKRGMEIHNHALK-RGLESEVVVANALIDMYAKCGDID 520
+ ++L AC + + N K GL E+ A+ D+ + G ++
Sbjct: 410 AFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 461
Score = 67.0 bits (162), Expect = 2e-09
Identities = 44/142 (30%), Positives = 68/142 (47%)
Frame = +2
Query: 95 RLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFYRLKQKDVGLWNS 274
R+ S QA++LH R SH A +I Y+ L EA +F L+ V W S
Sbjct: 17 RIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLVFKTLESPPVLAWKS 75
Query: 275 MIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASILPACIDLAGLKRGMEIHNHALKRG 454
+I +T F +AL F EM P S+L +C + L+ G +H ++ G
Sbjct: 76 VIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 455 LESEVVVANALIDMYAKCGDID 520
++ ++ NAL++MY+K ID
Sbjct: 136 MDCDLYTGNALMNMYSKLLGID 157
>ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein
SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 139 bits (350), Expect = 4e-31
Identities = 66/171 (38%), Positives = 108/171 (63%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EAL F+ M+F G + +TF S++ ACG L +L Q +++H ++ R ++ +VFV AL+
Sbjct: 255 EALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALV 314
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D YSK ++ AE +F R+ K++ W ++IVGY Q G +A++VF+EM R +P
Sbjct: 315 DMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDY 374
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ S++ +C +LA L+ G + H AL GL + V+NAL+ +Y KCG I+
Sbjct: 375 TLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIE 425
Score = 82.4 bits (202), Expect = 6e-14
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 31/190 (16%)
Frame = +2
Query: 41 SGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSN---- 208
S + T S+++ A LG ++ H + R GF ++ FV L+D Y+K +
Sbjct: 134 SSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGD 193
Query: 209 ---------------------------RLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRF 307
+EEA +F + +D W +M+ G+TQ G
Sbjct: 194 AKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLE 253
Query: 308 YKALQVFAEMIRLHENPSLISVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANAL 487
+AL++F M + SIL AC L+ L++G +IH + ++ + V V +AL
Sbjct: 254 SEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSAL 313
Query: 488 IDMYAKCGDI 517
+DMY+KC I
Sbjct: 314 VDMYSKCRSI 323
Score = 79.3 bits (194), Expect = 5e-13
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 1/171 (0%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F MQ G + +T SVI++C L SL + + H G ++ V+ AL+
Sbjct: 356 EAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALV 415
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
Y K +E+A +F + D W +++ GY Q GR + + +F +M+ P +
Sbjct: 416 TLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGV 475
Query: 368 SVASILPACIDLAGLKRGME-IHNHALKRGLESEVVVANALIDMYAKCGDI 517
+ +L AC +++G H+ G+ +ID+Y++ G +
Sbjct: 476 TFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKL 526
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/150 (24%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Frame = +2
Query: 62 FTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFYR 241
+ + ++ A G+ G +AR + + ++F AL+ + + L + E +F
Sbjct: 42 YLLNHLLTAYGKAGRHARARRVFDAMPH----PNLFTYNALLSTLAHARLLSDMEALFAS 97
Query: 242 LKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHEN--PSLISVASILPACIDLAGLK 415
+ Q+D+ +N++I G++ GG +A++V+ +++ + PS I++++++ A L
Sbjct: 98 MTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRA 157
Query: 416 RGMEIHNHALKRGLESEVVVANALIDMYAK 505
G + H L+ G + V + L+DMYAK
Sbjct: 158 LGKQFHCQILRLGFGANAFVGSPLVDMYAK 187
>ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At1g68930 gi|12323213|gb|AAG51585.1|AC011665_6
hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 139 bits (349), Expect = 5e-31
Identities = 64/171 (37%), Positives = 105/171 (61%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F+ M+ G + + F SV+ ACG LG++ + +++H + R F+ H++V ALI
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y K L A+ +F R+KQK+V W +M+VGY Q GR +A+++F +M R +P
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ + AC +++ L+ G + H A+ GL V V+N+L+ +Y KCGDID
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/172 (23%), Positives = 85/172 (49%), Gaps = 1/172 (0%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F MQ SG + +T I+AC + SL + + HG G +V V+ +L+
Sbjct: 354 EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLV 413
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
Y K ++++ +F + +D W +M+ Y Q GR + +Q+F +M++ P +
Sbjct: 414 TLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGV 473
Query: 368 SVASILPACIDLAGLKRGMEIHN-HALKRGLESEVVVANALIDMYAKCGDID 520
++ ++ AC +++G + G+ + + +ID++++ G ++
Sbjct: 474 TLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLE 525
Score = 64.3 bits (155), Expect = 2e-08
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Frame = +2
Query: 62 FTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFYR 241
F +++++ A + S AR + + + ++F L+ AYSK+ + E E+ F +
Sbjct: 42 FLYNNIVHAYALMKSSTYARRVFDRIP----QPNLFSWNNLLLAYSKAGLISEMESTFEK 97
Query: 242 LKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIR-LHENPSLISVASILPACIDLAGLKR 418
L +D WN +I GY+ G A++ + M+R N + +++ ++L +
Sbjct: 98 LPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSL 157
Query: 419 GMEIHNHALKRGLESEVVVANALIDMYAKCGDI 517
G +IH +K G ES ++V + L+ MYA G I
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
>gb|EMJ15466.1| hypothetical protein PRUPE_ppa025121mg [Prunus persica]
Length = 796
Score = 138 bits (348), Expect = 7e-31
Identities = 67/168 (39%), Positives = 106/168 (63%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F M+ + + +T +S++ AC GSL++ R++H ++ G +S +FV L+
Sbjct: 307 EAIELFSEMERNDVSPDVYTITSILHACACNGSLKKGRDIHKYIREHGMDSSLFVCNTLM 366
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y+K +E+A ++F + KD+ WN+MI GY++ +AL++F+EM + P +
Sbjct: 367 DMYAKCGSMEDAHSVFSSMPVKDIVSWNTMIGGYSKNCLPNEALKLFSEM-QQKSKPDGM 425
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCG 511
++AS+LPAC LA L RG EIH H L+ G S+ VANAL+DMY KCG
Sbjct: 426 TIASVLPACASLAALNRGQEIHGHILRNGYFSDRYVANALVDMYVKCG 473
Score = 120 bits (302), Expect = 1e-25
Identities = 59/170 (34%), Positives = 98/170 (57%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
E ++ F+ MQ G AN +TFS ++ LG +R+ +HG++ + GF S V +L+
Sbjct: 105 EGIHLFRKMQELGIQANSYTFSCILKCFSSLGYVREGEWVHGYLYKLGFGSDNTVGNSLM 164
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
Y K+ +E A +F L +DV WNSMI Y G K +++F +M+ L + L
Sbjct: 165 AFYFKNRIIESARKVFDELSDRDVISWNSMISAYVANGLAEKGVEIFRQMLSLGVDVDLA 224
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDI 517
+V ++L AC D L G +H++A+K L+ +++ N ++DMY+KCGD+
Sbjct: 225 TVINVLMACSDGGNLSLGRALHSYAIKTCLDMDIMFYNNVLDMYSKCGDL 274
Score = 109 bits (272), Expect = 4e-22
Identities = 56/166 (33%), Positives = 91/166 (54%)
Frame = +2
Query: 23 FQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSK 202
F+ M G + T +V+ AC G+L R LH + + + + ++D YSK
Sbjct: 211 FRQMLSLGVDVDLATVINVLMACSDGGNLSLGRALHSYAIKTCLDMDIMFYNNVLDMYSK 270
Query: 203 SNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASI 382
L A +F ++ Q+ V W SMI GY + G +A+++F+EM R +P + ++ SI
Sbjct: 271 CGDLSSATQVFGKMGQRSVVSWTSMIAGYVREGLSDEAIELFSEMERNDVSPDVYTITSI 330
Query: 383 LPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
L AC LK+G +IH + + G++S + V N L+DMYAKCG ++
Sbjct: 331 LHACACNGSLKKGRDIHKYIREHGMDSSLFVCNTLMDMYAKCGSME 376
Score = 78.2 bits (191), Expect = 1e-12
Identities = 48/129 (37%), Positives = 67/129 (51%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EAL F MQ + T +SV+ AC L +L + +E+HGH+ R G+ S +VA AL+
Sbjct: 408 EALKLFSEMQQKS-KPDGMTIASVLPACASLAALNRGQEIHGHILRNGYFSDRYVANALV 466
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y K L A +F + KD+ W ++ GY G +A+ F EM + P I
Sbjct: 467 DMYVKCGVLVLARLLFDIIPIKDLISWTVIVAGYGMHGFGSEAITAFNEMRKSGIKPDSI 526
Query: 368 SVASILPAC 394
S SIL AC
Sbjct: 527 SFISILYAC 535
>gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis]
Length = 877
Score = 137 bits (345), Expect = 1e-30
Identities = 71/168 (42%), Positives = 104/168 (61%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F M+ +G + FT +S++ AC GSL +++H ++ G ES++FV AL+
Sbjct: 389 EAIRLFYEMERNGVSPDIFTITSILHACACSGSLEDGKDVHNYIRESGMESNLFVCNALM 448
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D YSK +++A +F R+ KD+ WN+MI GY++ +AL++FAEM + S I
Sbjct: 449 DMYSKCGSMDDANLVFSRMPAKDIISWNTMIGGYSKNRLPNEALKLFAEMQGKSKADS-I 507
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCG 511
+ A ILPAC LA L +G EIH H L+ G + VANAL+DMY KCG
Sbjct: 508 TAACILPACASLAALAKGREIHGHVLRNGYFQDRHVANALVDMYVKCG 555
Score = 122 bits (307), Expect = 4e-26
Identities = 60/171 (35%), Positives = 98/171 (57%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
E++ F+ MQ G AN T S V+ G LG+L++ +H ++ + GF + V +L+
Sbjct: 187 ESVSLFKKMQELGIQANSHTLSCVLKCFGALGNLKEGERIHAYLYKLGFGCYNTVLNSLV 246
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
Y KS R+E A+ +F L +DV WNSMI GY+ G K + +F +M+ L N L
Sbjct: 247 AFYFKSGRVESAQKVFDELTDRDVISWNSMISGYSSNGLGEKGVGIFGKMLSLGVNVDLA 306
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ + L AC ++ G +H +A+K + E++ N L+DMY+KCG++D
Sbjct: 307 TIVNALVACANIGTHLLGRAVHAYAIKACFDGEIMFRNTLLDMYSKCGELD 357
Score = 115 bits (287), Expect = 8e-24
Identities = 56/166 (33%), Positives = 92/166 (55%)
Frame = +2
Query: 23 FQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSK 202
F M G + + T + + AC +G+ R +H + + F+ + L+D YSK
Sbjct: 293 FGKMLSLGVNVDLATIVNALVACANIGTHLLGRAVHAYAIKACFDGEIMFRNTLLDMYSK 352
Query: 203 SNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASI 382
L+ A +F + ++ V W SMI GY + GR +A+++F EM R +P + ++ SI
Sbjct: 353 CGELDAAVQVFEKTGERSVVSWTSMIAGYAREGRSNEAIRLFYEMERNGVSPDIFTITSI 412
Query: 383 LPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
L AC L+ G ++HN+ + G+ES + V NAL+DMY+KCG +D
Sbjct: 413 LHACACSGSLEDGKDVHNYIRESGMESNLFVCNALMDMYSKCGSMD 458
Score = 81.6 bits (200), Expect = 1e-13
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 2/172 (1%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EAL F MQ A+ T + ++ AC L +L + RE+HGHV R G+ VA AL+
Sbjct: 490 EALKLFAEMQGKS-KADSITAACILPACASLAALAKGREIHGHVLRNGYFQDRHVANALV 548
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y K L A+ +F + KD+ W MI GY G +A+ F EM P +
Sbjct: 549 DMYVKCGLLALAQVLFDMIPVKDLISWTVMIAGYGMHGFGREAIAAFDEMRHAGIEPDEV 608
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVAN--ALIDMYAKCGDI 517
S SIL AC +GL G N ++ E ++ + ++D+ ++ G++
Sbjct: 609 SFISILYAC-SHSGLDEGWSFFN-VMRNEYSIEPMLEHYACMVDLLSRTGNL 658
>ref|XP_006301711.1| hypothetical protein CARUB_v10022169mg [Capsella rubella]
gi|482570421|gb|EOA34609.1| hypothetical protein
CARUB_v10022169mg [Capsella rubella]
Length = 743
Score = 137 bits (345), Expect = 1e-30
Identities = 64/171 (37%), Positives = 104/171 (60%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F+ M+ G + + F SV+ ACG LG++ + +++H + R + H++V ALI
Sbjct: 253 EAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNLQDHIYVGSALI 312
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y K L A+ +F R+KQK+V W +M+VGY Q GR +A+++F +M R +P
Sbjct: 313 DMYCKCKLLHCAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRNGIDPDHY 372
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ + AC ++A L+ G + H A+ GL V V+N+L+ +Y KCGDID
Sbjct: 373 TLGQAVSACANIASLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423
Score = 83.2 bits (204), Expect = 3e-14
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 34/182 (18%)
Frame = +2
Query: 65 TFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFYRL 244
T +++ G + R++HG V + GF+S++ V L+D Y+K + +A+ +FY L
Sbjct: 141 TLMTMLKLSSSNGHVSLGRQIHGQVIKLGFDSYLLVGSPLLDMYAKVGFISDAKKVFYGL 200
Query: 245 K------------------------------QKDVGLWNSMIVGYTQGGRFYKALQVFAE 334
QKD W++MI G Q G +A++ F E
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGMQKDSVSWSAMIKGLVQNGLEKEAIECFRE 260
Query: 335 M----IRLHENPSLISVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYA 502
M +++ + P S+LPAC L + G +IH ++ L+ + V +ALIDMY
Sbjct: 261 MKIEGLKMDQYP----FGSVLPACGGLGAINEGKQIHACIIRTNLQDHIYVGSALIDMYC 316
Query: 503 KC 508
KC
Sbjct: 317 KC 318
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/175 (23%), Positives = 87/175 (49%), Gaps = 4/175 (2%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F MQ +G + +T ++AC + SL + + HG G +V V+ +L+
Sbjct: 354 EAVKIFLDMQRNGIDPDHYTLGQAVSACANIASLEEGSQFHGKAITSGLIHYVTVSNSLV 413
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
Y K ++++ +F + +D W +M+ Y Q GR +A+Q+F +M++ P +
Sbjct: 414 TLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAIEAIQLFDKMVQHGLKPDGV 473
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVAN----ALIDMYAKCGDID 520
++ ++ AC +++G + E +V +N +ID++++ G ++
Sbjct: 474 TLTGVISACSRAGLVEKGQRYFELMIN---EYGIVPSNGHYSCMIDLFSRSGRLE 525
Score = 71.2 bits (173), Expect = 1e-10
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Frame = +2
Query: 50 HANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAEN 229
H F +++++ A + S AR + + + ++F L+ AYSKS L E E
Sbjct: 38 HPETFLYNNIVHAYAVVRSSTYARRVFDGIP----QPNLFSWNNLLLAYSKSGHLSEMER 93
Query: 230 IFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIR-LHENPSLISVASILPACIDLA 406
F +L +D WN +I GY+ G A++ + M++ N + +++ ++L
Sbjct: 94 TFEKLPDRDGVTWNVLIEGYSLSGLVGSAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNG 153
Query: 407 GLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDI 517
+ G +IH +K G +S ++V + L+DMYAK G I
Sbjct: 154 HVSLGRQIHGQVIKLGFDSYLLVGSPLLDMYAKVGFI 190
>ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, partial [Populus
trichocarpa] gi|550340410|gb|EEE86244.2| hypothetical
protein POPTR_0004s05810g, partial [Populus trichocarpa]
Length = 778
Score = 137 bits (344), Expect = 2e-30
Identities = 67/168 (39%), Positives = 101/168 (60%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F M G + FT ++V+ AC GSL +++H ++ +S++FV AL+
Sbjct: 289 EAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALM 348
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y+K +E+A ++F + KD+ WN+MI GY++ +AL +F +M+ L P
Sbjct: 349 DMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMV-LEMKPDGT 407
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCG 511
++A ILPAC LA L RG E+H H L+ G S+ VANAL+DMY KCG
Sbjct: 408 TLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCG 455
Score = 105 bits (262), Expect = 6e-21
Identities = 57/171 (33%), Positives = 90/171 (52%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
E++ F+ M G N T S V+ LGS+++ + +HG + + G S+ V +LI
Sbjct: 87 ESVSLFRQMLDLGVEVNSHTVSCVLKCFAALGSVKEGKWVHGFLLKLGLGSYNAVVNSLI 146
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
Y K R++ A +F L +DV WNSMI GY G K +++F +M+ L + L
Sbjct: 147 AFYLKIRRVDVARKLFDELSNRDVISWNSMISGYVANGFSEKGVELFKKMLYLGVDMDLA 206
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ SIL AC + + G +H +K + + N L+DMYAKCG +D
Sbjct: 207 TMVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLD 257
Score = 96.3 bits (238), Expect = 4e-18
Identities = 49/166 (29%), Positives = 86/166 (51%)
Frame = +2
Query: 23 FQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSK 202
F+ M + G + T S++ AC G + R +HG + L+D Y+K
Sbjct: 193 FKKMLYLGVDMDLATMVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAK 252
Query: 203 SNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASI 382
L+ A +F + + V W S+I Y + G +A+++F EM R +P + ++ ++
Sbjct: 253 CGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTV 312
Query: 383 LPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
L AC L+ G ++HN+ + ++S + V NAL+DMYAKCG ++
Sbjct: 313 LHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSME 358
Score = 74.7 bits (182), Expect = 1e-11
Identities = 44/152 (28%), Positives = 73/152 (48%)
Frame = +2
Query: 65 TFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFYRL 244
T S++ L SL+ +++H + G + L+ Y L E IF ++
Sbjct: 5 TCCSILQLSAELKSLQDGKKVHSFICSSGISIDSVLGSKLVFMYVTCGDLREGRLIFDKI 64
Query: 245 KQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASILPACIDLAGLKRGM 424
+ + V LWN M+ GYT+ G F +++ +F +M+ L + +V+ +L L +K G
Sbjct: 65 RNEKVFLWNLMMNGYTKIGDFKESVSLFRQMLDLGVEVNSHTVSCVLKCFAALGSVKEGK 124
Query: 425 EIHNHALKRGLESEVVVANALIDMYAKCGDID 520
+H LK GL S V N+LI Y K +D
Sbjct: 125 WVHGFLLKLGLGSYNAVVNSLIAFYLKIRRVD 156
Score = 73.9 bits (180), Expect = 2e-11
Identities = 45/124 (36%), Positives = 59/124 (47%)
Frame = +2
Query: 65 TFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFYRL 244
T + ++ AC L SL + +E+HGH+ R GF S VA AL+D Y K A +F +
Sbjct: 408 TLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMI 467
Query: 245 KQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASILPACIDLAGLKRGM 424
KD+ W MI GY G A+ F EM + P +S SIL AC L G
Sbjct: 468 PTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGW 527
Query: 425 EIHN 436
N
Sbjct: 528 RFFN 531
>ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297333055|gb|EFH63473.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 740
Score = 137 bits (344), Expect = 2e-30
Identities = 63/171 (36%), Positives = 103/171 (60%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F+ M+ G + + F SV+ ACG LG++ R++H + R + H++V ALI
Sbjct: 250 EAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALI 309
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y K L A+ +F R+KQK+V W +M+VGY Q GR +A+++F +M R +P
Sbjct: 310 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHY 369
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ + AC +++ L+ G + H A+ GL + V+N+L+ +Y KCGDID
Sbjct: 370 TLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDID 420
Score = 84.3 bits (207), Expect = 1e-14
Identities = 44/175 (25%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F MQ SG + +T I+AC + SL + + HG G ++ V+ +L+
Sbjct: 351 EAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLV 410
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
Y K ++++ +F + +D W +M+ Y Q GR +A+Q+F +M++L P +
Sbjct: 411 TLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGV 470
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVAN----ALIDMYAKCGDID 520
++ ++ AC +++G + E +V +N +ID++++ G I+
Sbjct: 471 TLTGVISACSRAGLVEKGQRYFELMIN---EYGIVPSNGHYSCMIDLFSRSGRIE 522
Score = 82.8 bits (203), Expect = 4e-14
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 34/182 (18%)
Frame = +2
Query: 65 TFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFYRL 244
T +++ G + +++HG V + GFES++ V L+D YSK + +A+ +FY L
Sbjct: 138 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGL 197
Query: 245 K------------------------------QKDVGLWNSMIVGYTQGGRFYKALQVFAE 334
+KD W++MI G Q G +A++ F E
Sbjct: 198 DDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFRE 257
Query: 335 M----IRLHENPSLISVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYA 502
M +++ + P S+LPAC L + G +IH ++ L+ + V +ALIDMY
Sbjct: 258 MKIEGLKMDQYP----FGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYC 313
Query: 503 KC 508
KC
Sbjct: 314 KC 315
Score = 69.3 bits (168), Expect = 5e-10
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 32/182 (17%)
Frame = +2
Query: 68 FSSVIAACGRLGSLRQARELHGHV---------------------------SRRGFES-- 160
+S+ I C LG+ R + +HG++ +RR F+
Sbjct: 6 YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65
Query: 161 --HVFVAGALIDAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAE 334
++F L+ AYSKS L E E F +L +D WN +I GY+ G A++ +
Sbjct: 66 QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 125
Query: 335 MIR-LHENPSLISVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCG 511
M++ N + +++ ++L + G +IH +K G ES ++V + L+DMY+K G
Sbjct: 126 MMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVG 185
Query: 512 DI 517
I
Sbjct: 186 CI 187
>ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 136 bits (343), Expect = 3e-30
Identities = 67/171 (39%), Positives = 106/171 (61%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EAL F+ M+ G + +TF S++ ACG L +L + +++H +++R +E +VFV AL+
Sbjct: 260 EALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALV 319
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D YSK + AE +F R+ K++ W +MIVGY Q G +A++VF+EM R P
Sbjct: 320 DMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDF 379
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ S++ +C +LA L+ G + H AL GL V V+NAL+ +Y KCG I+
Sbjct: 380 TLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIE 430
Score = 79.3 bits (194), Expect = 5e-13
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F MQ G + FT SVI++C L SL + + H G +V V+ AL+
Sbjct: 361 EAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALV 420
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
Y K +E+A +F + D W ++++GY Q G+ + + +F +M+ P +
Sbjct: 421 TLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGV 480
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVAN----ALIDMYAKCG 511
+ +L AC +GL + H++++ + ++V + +ID+Y++ G
Sbjct: 481 TFIGVLSAC-SRSGLVDKGRSYFHSMQQ--DHDIVPLDDHYTCMIDLYSRSG 529
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/159 (22%), Positives = 77/159 (48%), Gaps = 3/159 (1%)
Frame = +2
Query: 50 HANP-FTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAE 226
H +P + ++++ A G L AR + + R ++ +L+ A +++ + + E
Sbjct: 42 HPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGR----NLVTGNSLLSALARAGLVRDME 97
Query: 227 NIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHEN--PSLISVASILPACID 400
+F L Q+D +N+++ G+++ G +A + ++R PS I+++ ++
Sbjct: 98 RLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASA 157
Query: 401 LAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDI 517
L G ++H L+ G + + L+DMYAK G I
Sbjct: 158 LGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPI 196
>ref|XP_002527042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223533604|gb|EEF35342.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 520
Score = 136 bits (343), Expect = 3e-30
Identities = 70/171 (40%), Positives = 97/171 (56%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
E + F M G T SS++ AC R L+ R +HG+ R + +FV+ LI
Sbjct: 215 ECIELFWRMNMEGTKPTVTTLSSILLACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLI 274
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
+ Y K +++ AENIFY L + +V LWN MI GY G + KAL ++ EM P +
Sbjct: 275 ELYFKCGKVQSAENIFYMLPKANVVLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAV 334
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
+ +SIL AC LA L++G EIHN K LE+ +V AL+DMYAKCG +D
Sbjct: 335 TFSSILSACSQLAALEKGKEIHNCITKNDLETNEIVMGALLDMYAKCGAVD 385
Score = 114 bits (284), Expect = 2e-23
Identities = 58/170 (34%), Positives = 100/170 (58%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
+AL F M+ SGF N T ++VI++C RL L + +E+H V + G FV AL+
Sbjct: 114 KALEMFGKMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALV 173
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y K L+ A++IF ++ +K + WNS+I GY+ + +++F M P++
Sbjct: 174 DMYGKFGCLDLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVT 233
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDI 517
+++SIL AC A L+ G IH +A++ ++ ++ V++ LI++Y KCG +
Sbjct: 234 TLSSILLACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKV 283
Score = 112 bits (281), Expect = 4e-23
Identities = 58/172 (33%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
Frame = +2
Query: 8 EALYFF-QTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGAL 184
EAL F + +Q+ + FT+ SV+ ACG LG R +H H+ + GF + VA +L
Sbjct: 12 EALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSGFVFDIVVASSL 71
Query: 185 IDAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSL 364
+ ++K N A +F + ++DV WN++I Y Q G+ KAL++F +M P+
Sbjct: 72 VSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMFGKMRDSGFEPNS 131
Query: 365 ISVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
+++ +++ +C L L+RG EIH ++ G+ + V +AL+DMY K G +D
Sbjct: 132 VTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGKFGCLD 183
Score = 94.4 bits (233), Expect = 1e-17
Identities = 47/157 (29%), Positives = 91/157 (57%), Gaps = 5/157 (3%)
Frame = +2
Query: 5 VEALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGAL 184
V+AL + M+ + + TFSS+++AC +L +L + +E+H +++ E++ V GAL
Sbjct: 315 VKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNCITKNDLETNEIVMGAL 374
Query: 185 IDAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSL 364
+D Y+K ++EA ++F +L ++D+ W S+I Y G+ +AL++F E+ + +P
Sbjct: 375 LDMYAKCGAVDEALSVFNKLPERDLLSWTSIISAYGSHGQALEALRLFEELQQSKASPDA 434
Query: 365 ISVASILPACIDLAGLKRG-----MEIHNHALKRGLE 460
++ ++L AC + +G I N+ +K GLE
Sbjct: 435 VTFLAVLSACSHAGLVDKGYYYFNQMITNYGIKPGLE 471
>ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Capsella rubella]
gi|482565768|gb|EOA29957.1| hypothetical protein
CARUB_v10013060mg [Capsella rubella]
Length = 730
Score = 136 bits (342), Expect = 3e-30
Identities = 58/171 (33%), Positives = 109/171 (63%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
+AL + M + + FT SSV+ + + +E+HG+ R+G ++ V++ +L+
Sbjct: 240 DALRLVREMGTTDIKPDAFTLSSVLPIFSEYVDVIKGKEIHGYAIRKGIDADVYIGSSLV 299
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y+KS R+E++E +F L ++D WNS++ GY Q GR+ +AL++F +M+ P +
Sbjct: 300 DMYAKSARIEDSERVFSHLARRDSISWNSLVAGYVQNGRYNEALRLFRQMVTTKVRPGPV 359
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
+ +S++PAC LA L+ G ++H + L+ G S + ++++L+DMY+KCG+I+
Sbjct: 360 AFSSVIPACAHLATLRLGKQLHGYVLRGGFGSNIFISSSLVDMYSKCGNIN 410
Score = 102 bits (253), Expect = 7e-20
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EAL F+ M + P FSSVI AC L +LR ++LHG+V R GF S++F++ +L+
Sbjct: 341 EALRLFRQMVTTKVRPGPVAFSSVIPACAHLATLRLGKQLHGYVLRGGFGSNIFISSSLV 400
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D YSK + A IF R+ D W ++I+GY G ++A+ +F EM P+ +
Sbjct: 401 DMYSKCGNINAARKIFDRMNVHDEVSWTAIIMGYALHGHGHEAVSLFEEMKEQGVKPNKV 460
Query: 368 SVASILPACIDLAGLKRGMEIHNHALK-RGLESEVVVANALIDMYAKCGDID 520
+ ++L AC + + N K GL E+ A+ D+ + G ++
Sbjct: 461 AFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 512
Score = 79.7 bits (195), Expect = 4e-13
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 51/221 (23%)
Frame = +2
Query: 11 ALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALID 190
AL F M+ SG + F SV+ +C + LR +HG + R G + ++ AL++
Sbjct: 89 ALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRLGESVHGCIVRLGMDCDLYTGNALMN 148
Query: 191 AYS--------------------KSNRL-------------------------------E 217
Y+ + +RL +
Sbjct: 149 MYAKLLGMGSKISVGKVFDEMPQRMSRLGSCCVATESVEPVMNCDEDLEAETCTMPLGID 208
Query: 218 EAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASILPACI 397
+F + +KDV +N++I GY Q G + AL++ EM P +++S+LP
Sbjct: 209 SVRKVFEVIPRKDVVSYNTIIAGYAQSGMYEDALRLVREMGTTDIKPDAFTLSSVLPIFS 268
Query: 398 DLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
+ + +G EIH +A+++G++++V + ++L+DMYAK I+
Sbjct: 269 EYVDVIKGKEIHGYAIRKGIDADVYIGSSLVDMYAKSARIE 309
Score = 65.9 bits (159), Expect = 5e-09
Identities = 43/137 (31%), Positives = 66/137 (48%)
Frame = +2
Query: 95 RLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFYRLKQKDVGLWNS 274
R+ S QA++LH R SH A +I Y+ L EA +F L+ V W S
Sbjct: 17 RIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLESPPVLAWKS 75
Query: 275 MIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASILPACIDLAGLKRGMEIHNHALKRG 454
+I +T F +AL F EM P S+L +C + L+ G +H ++ G
Sbjct: 76 VIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRLGESVHGCIVRLG 135
Query: 455 LESEVVVANALIDMYAK 505
++ ++ NAL++MYAK
Sbjct: 136 MDCDLYTGNALMNMYAK 152
>ref|XP_002514567.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546171|gb|EEF47673.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 515
Score = 136 bits (342), Expect = 3e-30
Identities = 67/171 (39%), Positives = 104/171 (60%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ FF+ M+ G + +TF SV+ ACG L +LR+ +++H + R +VFV AL+
Sbjct: 256 EAIDFFRQMRLDGIGMDQYTFGSVLTACGGLTALREGKQVHAFIIRSDCTDNVFVGSALV 315
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
D Y K L AE +F R+K K+V W +++VGY Q G +A++VF +M R P
Sbjct: 316 DMYCKCKILRYAEAVFKRMKYKNVVSWTAILVGYGQNGFSEEAVKVFCDMQRNGIEPDDF 375
Query: 368 SVASILPACIDLAGLKRGMEIHNHALKRGLESEVVVANALIDMYAKCGDID 520
++ S++ +C +LA L+ G + H AL GL S + V+NAL+ +Y KCG I+
Sbjct: 376 TLGSVISSCANLASLEEGAQFHCRALVSGLISSITVSNALVTLYGKCGSIE 426
Score = 85.1 bits (209), Expect = 9e-15
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Frame = +2
Query: 8 EALYFFQTMQFSG-FHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGAL 184
+A+ + +M G F+ N TFS+++ + R++HGH+ + GF +VFV L
Sbjct: 123 DAVKAYNSMMRDGVFNLNRITFSTMLILASSRELVDLGRQIHGHIMKFGFGGYVFVGSPL 182
Query: 185 IDAYSKS-------------------------------NRLEEAENIFYRLKQKDVGLWN 271
+D Y+K+ +E+++ +F+ +K++D W
Sbjct: 183 VDMYAKTGLVYEAKKVFDEMPDRNVVMHNTMITGLLKFGMMEDSKRLFHGMKERDNISWT 242
Query: 272 SMIVGYTQGGRFYKALQVFAEMIRLHENPSLISVASILPACIDLAGLKRGMEIHNHALKR 451
+MI G Q G +A+ F +M + S+L AC L L+ G ++H ++
Sbjct: 243 TMITGLVQNGLEEEAIDFFRQMRLDGIGMDQYTFGSVLTACGGLTALREGKQVHAFIIRS 302
Query: 452 GLESEVVVANALIDMYAKC 508
V V +AL+DMY KC
Sbjct: 303 DCTDNVFVGSALVDMYCKC 321
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/147 (27%), Positives = 73/147 (49%)
Frame = +2
Query: 8 EALYFFQTMQFSGFHANPFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALI 187
EA+ F MQ +G + FT SVI++C L SL + + H G S + V+ AL+
Sbjct: 357 EAVKVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISSITVSNALV 416
Query: 188 DAYSKSNRLEEAENIFYRLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIRLHENPSLI 367
Y K +E+++ +F + +D W ++I GY Q G+ + +++F M+ P +
Sbjct: 417 TLYGKCGSIEDSDRLFNEMNFRDEVSWTALISGYAQFGKARETIELFERMLAHGLKPDAV 476
Query: 368 SVASILPACIDLAGLKRGMEIHNHALK 448
+ +L AC + RG + + L+
Sbjct: 477 TFIGVLLACSRAGLVARGQQFFDSMLE 503
Score = 77.4 bits (189), Expect = 2e-12
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Frame = +2
Query: 59 PFTFSSVIAACGRLGSLRQARELHGHVSRRGFESHVFVAGALIDAYSKSNRLEEAENIFY 238
PF +++++ A G+LG++ AR L + +R + F ++ AYSKS L + + IF
Sbjct: 43 PFLYNNLMNAYGKLGNIAYARHLFDGMPQR----NSFSWNTILSAYSKSGHLPKMKEIFS 98
Query: 239 RLKQKDVGLWNSMIVGYTQGGRFYKALQVFAEMIR---LHENPSLISVASILPACIDLAG 409
+ +D WN+++ GY G A++ + M+R + N S IL + +L
Sbjct: 99 LMPNRDGVSWNTILSGYASYGSVSDAVKAYNSMMRDGVFNLNRITFSTMLILASSRELVD 158
Query: 410 LKRGMEIHNHALKRGLESEVVVANALIDMYAKCG 511
L G +IH H +K G V V + L+DMYAK G
Sbjct: 159 L--GRQIHGHIMKFGFGGYVFVGSPLVDMYAKTG 190