BLASTX nr result
ID: Ephedra25_contig00025031
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00025031
(1355 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001772028.1| predicted protein [Physcomitrella patens] gi... 325 2e-86
ref|XP_006663930.1| PREDICTED: DNA polymerase alpha subunit B-li... 316 2e-83
dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare] 312 2e-82
ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [S... 312 2e-82
ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [A... 309 2e-81
gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao] 308 3e-81
gb|AFW56457.1| hypothetical protein ZEAMMB73_686460 [Zea mays] 307 6e-81
ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea ma... 307 6e-81
ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li... 307 8e-81
gb|EMT19418.1| DNA polymerase alpha subunit B [Aegilops tauschii] 307 8e-81
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li... 306 1e-80
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V... 306 1e-80
gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japo... 305 2e-80
ref|NP_001066483.1| Os12g0242900 [Oryza sativa Japonica Group] g... 305 2e-80
gb|ABG21942.1| DNA polymerase alpha subunit B family protein, ex... 305 2e-80
gb|ABA97199.2| DNA polymerase alpha subunit B family protein, ex... 305 2e-80
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-li... 305 3e-80
gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indi... 304 6e-80
ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-li... 303 1e-79
ref|XP_004960699.1| PREDICTED: DNA polymerase alpha subunit B-li... 301 4e-79
>ref|XP_001772028.1| predicted protein [Physcomitrella patens] gi|162676629|gb|EDQ63109.1|
predicted protein [Physcomitrella patens]
Length = 635
Score = 325 bits (834), Expect = 2e-86
Identities = 165/328 (50%), Positives = 226/328 (68%), Gaps = 7/328 (2%)
Frame = -2
Query: 1354 SRVIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLA 1175
+R+ DS P+S S D+ P KR T S+ + PR ++ AAGPFTT DNLA
Sbjct: 317 TRIFDSIPVSSSSLKSDE--PPTKRRT---SSRDPSDSEPRQYTRIVAAAGPFTTNDNLA 371
Query: 1174 FQPLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDD 995
++PL EL +Y++K N+LILMGPFVDS+HPQIK+GT+ KLF +F E++ R+ DYC++
Sbjct: 372 YEPLVELFAYAKKVRPNLLILMGPFVDSEHPQIKQGTVGKLFSHIFQEEIRMRVEDYCEE 431
Query: 994 MGPNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTI 815
MG R++LVPS RDAHHD +FPQP F+ F+ + QIT ++NPG+L+++E+ VG CT
Sbjct: 432 MGDGCRIVLVPSHRDAHHDLIFPQPPFDADEFEDPNHQITLLSNPGVLKVDEVTVGFCTT 491
Query: 814 DVLRHLSSEEISRNSGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDIL 635
D+LRHLSSEE+SR G ++DR++RLA+H+L+QRSFYPL+P VPLDL +PE+LD+
Sbjct: 492 DILRHLSSEEVSRVPQGASSDRMTRLASHLLSQRSFYPLFPPPQSVPLDLSVAPESLDLS 551
Query: 634 VAPDILILPSDLAPFAKVLQLEEDLKTNEN-------KCVSINPGRLAKGASGGTFAEIL 476
+PDIL+L S+LAPF KVL L D++ EN KC+ INPG A+G SGGTF EI
Sbjct: 552 SSPDILLLSSNLAPFVKVLSLPADIQRQENREKVEKVKCICINPGYAARGMSGGTFTEIH 611
Query: 475 IQEREQSYNQNENLTSLDEKTAVSIVRL 392
+ S + N L L ++ V IVR+
Sbjct: 612 L----SSGDSNTELEPLHKRAQVKIVRV 635
>ref|XP_006663930.1| PREDICTED: DNA polymerase alpha subunit B-like [Oryza brachyantha]
Length = 410
Score = 316 bits (809), Expect = 2e-83
Identities = 164/322 (50%), Positives = 227/322 (70%), Gaps = 1/322 (0%)
Frame = -2
Query: 1354 SRVIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLA 1175
S++IDS P S +Q+ P AK+ +D +S ++ R +S +IAAGP+TTTDNL
Sbjct: 109 SKLIDSIPNSSDAQL-----PHAKKQAVDSESHQSSDILSRV-LSSVIAAGPYTTTDNLL 162
Query: 1174 FQPLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDD 995
F+PL+ELLSY+ +K +LILMGPF+DS HP+IK+GT+D+ FQD+FL ++ +++D+
Sbjct: 163 FEPLQELLSYASRKQPQLLILMGPFIDSDHPEIKKGTVDQSFQDIFLFEIMRKIQDFTQY 222
Query: 994 MGPNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTI 815
+G N RVILVPS RDAHHDFVFPQPAF+ + + ++ QI+C+ANP L NEI G CT+
Sbjct: 223 LGHNVRVILVPSVRDAHHDFVFPQPAFDLNLPEDITHQISCLANPSLFSCNEIQFGCCTM 282
Query: 814 DVLRHLSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDI 638
D+L+HLS EEISR GGK DR+ R+ AHIL Q+S+YPLYP +GVPLD + AL+I
Sbjct: 283 DILKHLSGEEISRKPPGGKPGDRIGRICAHILKQQSYYPLYPPPAGVPLDFSLASGALEI 342
Query: 637 LVAPDILILPSDLAPFAKVLQLEEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQ 458
APD+L+LPSDLAPF KVL L+E + ++ + +NPGRLAKG GGTF E+
Sbjct: 343 SSAPDVLLLPSDLAPFVKVLSLDESSEEPKH-FICVNPGRLAKGIGGGTFVEL------- 394
Query: 457 SYNQNENLTSLDEKTAVSIVRL 392
+YN++ +KT+ SI+R+
Sbjct: 395 NYNED------TDKTSASIIRI 410
>dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 625
Score = 312 bits (799), Expect = 2e-82
Identities = 157/297 (52%), Positives = 211/297 (71%), Gaps = 1/297 (0%)
Frame = -2
Query: 1354 SRVIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLA 1175
S++IDS P+SV Q+ P AK+ +D + N++ R +S +IAAGPFTTTDNL
Sbjct: 324 SKLIDSIPVSVDDQL-----PCAKKQAVDHEGHQNSNTLSRV-LSSVIAAGPFTTTDNLL 377
Query: 1174 FQPLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDD 995
F+PL+ELLSY+ +K +LILMGPF+DS HP+IK+GT D+ F D+F ++ +L+D+
Sbjct: 378 FEPLQELLSYACRKQPQLLILMGPFIDSDHPEIKKGTSDQSFHDIFRFEILRKLQDFTQY 437
Query: 994 MGPNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTI 815
+G N RVILVPS RDAHHD VFPQPAF+ H + ++ QITC++NP L NEI G CT+
Sbjct: 438 LGYNVRVILVPSVRDAHHDTVFPQPAFDLHLPEDITQQITCLSNPSLFSSNEIQFGCCTV 497
Query: 814 DVLRHLSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDI 638
D+L+ LS +EISR GGK DR+ RLA HI+ Q+S+YPLYP A+GVP+D + EAL+I
Sbjct: 498 DILKQLSGDEISRKPPGGKAADRIGRLATHIVKQQSYYPLYPPAAGVPMDFSLAKEALEI 557
Query: 637 LVAPDILILPSDLAPFAKVLQLEEDLKTNENKCVSINPGRLAKGASGGTFAEILIQE 467
APD+L+LPSDLAP KVL + ED + + + + +NPGRLAKG GGTF E+ E
Sbjct: 558 PSAPDVLLLPSDLAPSVKVLSVNEDTE-EQKRFICVNPGRLAKGIGGGTFVELYYNE 613
>ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
gi|241916387|gb|EER89531.1| hypothetical protein
SORBIDRAFT_10g009040 [Sorghum bicolor]
Length = 626
Score = 312 bits (799), Expect = 2e-82
Identities = 165/323 (51%), Positives = 224/323 (69%), Gaps = 2/323 (0%)
Frame = -2
Query: 1354 SRVIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASK-TPRGNISMLIAAGPFTTTDNL 1178
S++IDS P+SV +Q+ P AK+ ID +S N+ T +S +IAAGP+TTTDNL
Sbjct: 323 SKLIDSIPVSVDAQL-----PSAKKQAIDNESNQNSDAGTLSRALSSVIAAGPYTTTDNL 377
Query: 1177 AFQPLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCD 998
F+PL+ELLSY+ +K +LILMGPF+DS HP IK+GT+D+ F D+F ++ +++D+
Sbjct: 378 LFEPLQELLSYACRKQPQLLILMGPFIDSDHPDIKKGTVDQSFHDIFHFEILRKIQDFTQ 437
Query: 997 DMGPNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCT 818
+G RVIL+PS RDAHHDFVFPQPAF+ ++ + ++ QITC+ANP L NEI G CT
Sbjct: 438 YLGNTVRVILIPSVRDAHHDFVFPQPAFDLNFPEDITHQITCLANPCLFSSNEIHFGCCT 497
Query: 817 IDVLRHLSSEEISRNSG-GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALD 641
+D+L+ LS EEISR GK DR+ RLA+HIL Q+S+YPLYP+A+GVPLD + EAL+
Sbjct: 498 VDILKQLSGEEISRKPPVGKPADRIGRLASHILKQQSYYPLYPSAAGVPLDFSLAKEALE 557
Query: 640 ILVAPDILILPSDLAPFAKVLQLEEDLKTNENKCVSINPGRLAKGASGGTFAEILIQERE 461
I APD+L+LPSDLAPF KVL L E ++ + + +NPGRLAKG GGTF E+
Sbjct: 558 ISSAPDVLLLPSDLAPFVKVLSLGEG-SDDQKRFICVNPGRLAKGIGGGTFVELY----- 611
Query: 460 QSYNQNENLTSLDEKTAVSIVRL 392
YN+ +KT SI+R+
Sbjct: 612 --YNEG------IDKTNASIIRI 626
>ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [Amborella trichopoda]
gi|548862999|gb|ERN20355.1| hypothetical protein
AMTR_s00066p00201540 [Amborella trichopoda]
Length = 628
Score = 309 bits (791), Expect = 2e-81
Identities = 163/323 (50%), Positives = 222/323 (68%), Gaps = 2/323 (0%)
Frame = -2
Query: 1354 SRVIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLA 1175
S+++DS+P+ S +D P AK+ D + A+K R +S++IAAGP +TTDNL
Sbjct: 324 SKLVDSFPLIGSSDLD---LPPAKKQATDQNGE-PATKASR-ELSIVIAAGPLSTTDNLL 378
Query: 1174 FQPLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDD 995
F+PL ELL+Y+R+K +LILMGPFVD++HP+IK+GTID+ F +VF E++ +L DYC
Sbjct: 379 FEPLTELLAYARRKQPQLLILMGPFVDTEHPKIKKGTIDESFAEVFQEEILNKLHDYCAH 438
Query: 994 MGPNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTI 815
MGP AR++LVPSTRDAH+DFVFPQP FE + QITC+ANPG+L NEI +G CT
Sbjct: 439 MGPAARIVLVPSTRDAHNDFVFPQPPFEIYPSTDPDQQITCLANPGVLISNEITIGCCTA 498
Query: 814 DVLRHLSSEEISRNSGGKTN-DRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDI 638
DVL+ LS EE+SR S + DR+ RL +H++ QR FYP+YP + G+PLD +PEAL +
Sbjct: 499 DVLKQLSGEEVSRMSTDALSIDRIGRLVSHVIKQRCFYPVYPPSVGLPLDFSIAPEALHM 558
Query: 637 LVAPDILILPSDLAPFAKVLQLEEDLKTNE-NKCVSINPGRLAKGASGGTFAEILIQERE 461
PD+L++PSDLAPF K L E T + ++C+ INPGRLAKG SGGTF E+
Sbjct: 559 ASIPDLLLMPSDLAPFIKALPFGEGSDTEKYSRCLCINPGRLAKGVSGGTFVEL------ 612
Query: 460 QSYNQNENLTSLDEKTAVSIVRL 392
SY N ++T+ SI+R+
Sbjct: 613 -SYLNN------PDQTSASIIRI 628
>gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]
Length = 621
Score = 308 bits (789), Expect = 3e-81
Identities = 163/306 (53%), Positives = 214/306 (69%), Gaps = 4/306 (1%)
Frame = -2
Query: 1354 SRVIDSYPISVPSQMDDQHAPLAKRITIDPKSQI-NASKTPRGNISMLIAAGPFTTTDNL 1178
S ++DS P+++ + D + P AKR ++ + Q N S TP IS++IAAGPFTTTDNL
Sbjct: 316 SEIVDSVPLTIAA---DTNLPPAKRQALNEEIQATNLSSTPT-EISLIIAAGPFTTTDNL 371
Query: 1177 AFQPLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCD 998
F+PL+ELL+Y+ +K +LIL+GPF+DS+HPQIK+GT D F ++F +V ++DY +
Sbjct: 372 LFEPLKELLTYATRKCPQLLILLGPFIDSEHPQIKKGTFDLSFDEIFRSEVLRMVQDYVE 431
Query: 997 DMGPNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCT 818
MG +ARVIL+PS RDA+HDFVFPQP F+ + QIT + NPG+ +E+ +G CT
Sbjct: 432 YMGSDARVILIPSIRDANHDFVFPQPPFDLDLHN--LNQITSLTNPGIFEADEVKIGCCT 489
Query: 817 IDVLRHLSSEEISRNS-GGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALD 641
+D+L+HLS EEISR+S G +DRLSRLA+HIL+QRSFYPLYP A GVPLD +PEAL
Sbjct: 490 VDILKHLSGEEISRHSMDGTPSDRLSRLASHILSQRSFYPLYPPAEGVPLDSSLAPEALH 549
Query: 640 ILVAPDILILPSDLAPFAKVLQL--EEDLKTNENKCVSINPGRLAKGASGGTFAEILIQE 467
I PD+LILPSD+ F KVL L + K KC+ INPGRLAKGA GGTF E+ Q
Sbjct: 550 IPSVPDLLILPSDIKYFVKVLSLGGTSEGKEQTKKCICINPGRLAKGAGGGTFVELKYQG 609
Query: 466 REQSYN 449
N
Sbjct: 610 SPDKMN 615
>gb|AFW56457.1| hypothetical protein ZEAMMB73_686460 [Zea mays]
Length = 551
Score = 307 bits (787), Expect = 6e-81
Identities = 165/323 (51%), Positives = 220/323 (68%), Gaps = 2/323 (0%)
Frame = -2
Query: 1354 SRVIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASK-TPRGNISMLIAAGPFTTTDNL 1178
S++ DS P+SV +Q+ P AK+ ID +S N+ T +S +IAAGP+TTTDN+
Sbjct: 248 SKLFDSIPVSVDAQL-----PSAKKQAIDNESNQNSDAGTLSRALSSIIAAGPYTTTDNM 302
Query: 1177 AFQPLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCD 998
F+PL+ELLSY+ +K +LILMGPF+DS HP IK+GTID+ F D+F +V +++D+
Sbjct: 303 LFEPLQELLSYACRKPPQLLILMGPFIDSDHPDIKKGTIDQSFHDIFHFEVLRKIQDFTQ 362
Query: 997 DMGPNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCT 818
+G RVIL+PS RDAHHDFVFPQPAF+ + + + QIT +ANP L NEI G CT
Sbjct: 363 YLGNTVRVILIPSVRDAHHDFVFPQPAFDLNLLEDTTHQITSLANPCLFGSNEINFGCCT 422
Query: 817 IDVLRHLSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALD 641
+D+L+ LS +EISR GGK DR+ RLA+HIL Q+S+YPLYP A GVPLDL + EAL+
Sbjct: 423 VDILKQLSGQEISRKPPGGKPGDRIGRLASHILKQQSYYPLYPPAPGVPLDLSLAKEALE 482
Query: 640 ILVAPDILILPSDLAPFAKVLQLEEDLKTNENKCVSINPGRLAKGASGGTFAEILIQERE 461
I APD+L+LPSDLAPF KVL L E ++ + + +NPGRLAKG GGTF E+
Sbjct: 483 IPSAPDVLLLPSDLAPFVKVLSLGEG-SDDDRRFICVNPGRLAKGIGGGTFVELY----- 536
Query: 460 QSYNQNENLTSLDEKTAVSIVRL 392
YN+ +KT SI+R+
Sbjct: 537 --YNEG------IDKTNASIIRI 551
>ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea mays]
gi|194689050|gb|ACF78609.1| unknown [Zea mays]
gi|413916526|gb|AFW56458.1| hypothetical protein
ZEAMMB73_686460 [Zea mays]
Length = 626
Score = 307 bits (787), Expect = 6e-81
Identities = 165/323 (51%), Positives = 220/323 (68%), Gaps = 2/323 (0%)
Frame = -2
Query: 1354 SRVIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASK-TPRGNISMLIAAGPFTTTDNL 1178
S++ DS P+SV +Q+ P AK+ ID +S N+ T +S +IAAGP+TTTDN+
Sbjct: 323 SKLFDSIPVSVDAQL-----PSAKKQAIDNESNQNSDAGTLSRALSSIIAAGPYTTTDNM 377
Query: 1177 AFQPLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCD 998
F+PL+ELLSY+ +K +LILMGPF+DS HP IK+GTID+ F D+F +V +++D+
Sbjct: 378 LFEPLQELLSYACRKPPQLLILMGPFIDSDHPDIKKGTIDQSFHDIFHFEVLRKIQDFTQ 437
Query: 997 DMGPNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCT 818
+G RVIL+PS RDAHHDFVFPQPAF+ + + + QIT +ANP L NEI G CT
Sbjct: 438 YLGNTVRVILIPSVRDAHHDFVFPQPAFDLNLLEDTTHQITSLANPCLFGSNEINFGCCT 497
Query: 817 IDVLRHLSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALD 641
+D+L+ LS +EISR GGK DR+ RLA+HIL Q+S+YPLYP A GVPLDL + EAL+
Sbjct: 498 VDILKQLSGQEISRKPPGGKPGDRIGRLASHILKQQSYYPLYPPAPGVPLDLSLAKEALE 557
Query: 640 ILVAPDILILPSDLAPFAKVLQLEEDLKTNENKCVSINPGRLAKGASGGTFAEILIQERE 461
I APD+L+LPSDLAPF KVL L E ++ + + +NPGRLAKG GGTF E+
Sbjct: 558 IPSAPDVLLLPSDLAPFVKVLSLGEG-SDDDRRFICVNPGRLAKGIGGGTFVELY----- 611
Query: 460 QSYNQNENLTSLDEKTAVSIVRL 392
YN+ +KT SI+R+
Sbjct: 612 --YNEG------IDKTNASIIRI 626
>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
Length = 617
Score = 307 bits (786), Expect = 8e-81
Identities = 151/292 (51%), Positives = 204/292 (69%)
Frame = -2
Query: 1354 SRVIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLA 1175
S+++D P+S S ++ P K+ +D Q ++ +S++IAAGPFTT DNL
Sbjct: 314 SKIVDRIPLSASST---ENLPPTKKQAMDQYLQSTSAVVAMPELSLIIAAGPFTTVDNLF 370
Query: 1174 FQPLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDD 995
F+PL ELLSY+R+K ++IL+GPF+DS HP+IK+GT+D+ F ++F +++ RLRDY +
Sbjct: 371 FEPLAELLSYARRKQPQLIILLGPFIDSDHPEIKKGTVDRTFDEIFQDEILARLRDYVEY 430
Query: 994 MGPNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTI 815
MG ARVILVPS RDA HDFV+PQPAF+ D + QI + NPG+ NE+ V CT+
Sbjct: 431 MGSAARVILVPSVRDASHDFVYPQPAFDIQSPD-LEHQINSITNPGIFCANEVKVACCTV 489
Query: 814 DVLRHLSSEEISRNSGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDIL 635
DVL+ LS+EEISRN G + R++ LA HILNQRSFYPLYP A GVP+D +PEAL +
Sbjct: 490 DVLKQLSAEEISRNPQGGSKQRMTTLANHILNQRSFYPLYPPAEGVPIDFSLAPEALQMS 549
Query: 634 VAPDILILPSDLAPFAKVLQLEEDLKTNENKCVSINPGRLAKGASGGTFAEI 479
APDILILPSDLA F +V+ L E + E KC+ +NPGRL++G GG F E+
Sbjct: 550 TAPDILILPSDLAHFVRVISLGERSEGEEVKCICVNPGRLSRGEGGGFFMEL 601
>gb|EMT19418.1| DNA polymerase alpha subunit B [Aegilops tauschii]
Length = 594
Score = 307 bits (786), Expect = 8e-81
Identities = 155/297 (52%), Positives = 209/297 (70%), Gaps = 1/297 (0%)
Frame = -2
Query: 1354 SRVIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLA 1175
S++IDS P+SV Q+ P AK+ +D + N++ R +S +IAAGPFTTTDNL
Sbjct: 293 SKLIDSIPVSVDDQL-----PCAKKQAVDHEGHQNSNTLSRV-LSSVIAAGPFTTTDNLL 346
Query: 1174 FQPLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDD 995
F+PL+ELLSY+ +K +LILMGPF+DS HP+IK+GT D+ F D+F ++ +L+D+
Sbjct: 347 FEPLQELLSYACRKQPQLLILMGPFIDSDHPEIKKGTSDQSFHDIFHFEILRKLQDFTQY 406
Query: 994 MGPNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTI 815
+G N RVILVPS RDAHHD VFPQPAF+ H + ++ QITC++NP L NEI G CT+
Sbjct: 407 LGHNVRVILVPSVRDAHHDAVFPQPAFDSHLPEDITQQITCLSNPSLFSSNEIQFGCCTV 466
Query: 814 DVLRHLSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDI 638
D+L+ LS +EISR GGK DR+ RLA HI S+YPLYP A+GVP+D + EAL+I
Sbjct: 467 DILKQLSGDEISRKPPGGKAADRIGRLATHISTSYSYYPLYPPAAGVPMDFSLAKEALEI 526
Query: 637 LVAPDILILPSDLAPFAKVLQLEEDLKTNENKCVSINPGRLAKGASGGTFAEILIQE 467
APD+L+LPSDLAP KVL + ED + ++ + + +NPGRL+KG GGTF E+ E
Sbjct: 527 PSAPDVLLLPSDLAPSVKVLSVNEDTEEHK-RFICVNPGRLSKGIGGGTFVELYYNE 582
>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
polymerase alpha subunit B-like [Cucumis sativus]
Length = 622
Score = 306 bits (784), Expect = 1e-80
Identities = 160/295 (54%), Positives = 211/295 (71%), Gaps = 3/295 (1%)
Frame = -2
Query: 1354 SRVIDSYPISVPSQMDDQHAPLAKRITIDPKSQ-INASKTPRGNISMLIAAGPFTTTDNL 1178
S+++DS+P+S D P AK+I ++ Q IN S TP +SM+IA+GP+TTTDNL
Sbjct: 318 SKLVDSFPLSATI---DPILPPAKKIALNHDIQPINQSSTP-SELSMIIASGPYTTTDNL 373
Query: 1177 AFQPLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCD 998
F+PL ELL+Y+++K +LIL+GPFVDS+H IK GT++ F+++F +V R++DY +
Sbjct: 374 LFEPLTELLAYAKRKVPQLLILLGPFVDSEHSDIKRGTVEMSFEEIFKFEVLRRVQDYAE 433
Query: 997 DMGPNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCT 818
MGP+ARV+L+PSTRDA+HDF FPQPAF+ + QI+ NP +L N+ + CT
Sbjct: 434 HMGPDARVLLMPSTRDANHDFAFPQPAFD--IPSDLKLQISSPPNPCILEANQAKIACCT 491
Query: 817 IDVLRHLSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALD 641
+D+LRHLS EE+SRN + G TNDRLS LA+HIL QRSFYPLYP A GVPLD +P+ALD
Sbjct: 492 MDILRHLSGEELSRNLTKGGTNDRLSTLASHILRQRSFYPLYPPAEGVPLDFSLAPQALD 551
Query: 640 ILVAPDILILPSDLAPFAKVLQLEEDLKTNEN-KCVSINPGRLAKGASGGTFAEI 479
I V PDILILPSD+ F KV+ L E E +CV +NPGRLAKG GGTF E+
Sbjct: 552 ISVIPDILILPSDMKHFVKVISLGEGGSEEEQARCVCVNPGRLAKGEGGGTFVEL 606
>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product
[Vitis vinifera]
Length = 623
Score = 306 bits (784), Expect = 1e-80
Identities = 160/323 (49%), Positives = 218/323 (67%), Gaps = 2/323 (0%)
Frame = -2
Query: 1354 SRVIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLA 1175
S+++DS P+S P+ +D A K+ D + Q S +S+++AAGPFTTTDNL
Sbjct: 318 SKILDSIPVSAPTDVDLHPA---KKQARDEEFQSADSSHKLAELSLMVAAGPFTTTDNLL 374
Query: 1174 FQPLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDD 995
F+PL ELL+Y+R+K +LIL+GPFVDS+HP+I++GT+D+ F ++F ++ RL+DY +
Sbjct: 375 FEPLTELLAYARRKMPQLLILLGPFVDSEHPEIRKGTVDRSFDEIFHLEILRRLQDYVEY 434
Query: 994 MGPNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTI 815
MG ARVILVPS RDA+HDFVFPQPAF H D + QIT + NPG+ NE+ VG CT+
Sbjct: 435 MGSAARVILVPSIRDANHDFVFPQPAFSIHPPD-LKHQITSLTNPGMFDANEVKVGCCTV 493
Query: 814 DVLRHLSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDI 638
DV++ LS E ISRN + G + DR++ +A HIL+QRSFYPLYP A G+PLD +PEAL++
Sbjct: 494 DVIKQLSGEMISRNPTDGSSRDRMTTIANHILSQRSFYPLYPLAEGIPLDFSLAPEALEV 553
Query: 637 LVAPDILILPSDLAPFAKVLQLEEDLKTNE-NKCVSINPGRLAKGASGGTFAEILIQERE 461
PD+LILPSDLA F KVL L + E KC+ +NPGRLAKG GG F E+
Sbjct: 554 STIPDVLILPSDLASFVKVLSLGGRNEGEELVKCICVNPGRLAKGEGGGHFVEL------ 607
Query: 460 QSYNQNENLTSLDEKTAVSIVRL 392
N +KT+ S++R+
Sbjct: 608 -------NYQGSPDKTSASVIRI 623
>gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japonica Group]
Length = 625
Score = 305 bits (782), Expect = 2e-80
Identities = 157/320 (49%), Positives = 219/320 (68%), Gaps = 1/320 (0%)
Frame = -2
Query: 1348 VIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQ 1169
V+ S+P+ +D Q P AK+ +D + ++ R +S +IAAGP+TT+DNL F+
Sbjct: 322 VVSKLNDSIPNFVDAQ-LPRAKKQAVDSEGNQSSDVVSRV-LSSVIAAGPYTTSDNLLFE 379
Query: 1168 PLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMG 989
PL+EL+SY+ +K +LILMGPF+DS HP+IK+G +DK FQD+FL ++ +L+D+ +G
Sbjct: 380 PLQELISYASRKQPQLLILMGPFIDSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLG 439
Query: 988 PNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDV 809
N RVIL+PS RDAHHDFVFPQPAF+ + + ++ QITC+ANP L NEI G CT+D+
Sbjct: 440 HNVRVILIPSVRDAHHDFVFPQPAFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDI 499
Query: 808 LRHLSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILV 632
L+HLS EEISR G K DR+ R+ HIL Q+S+YPLYP +GVPLD + AL+I
Sbjct: 500 LKHLSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIAS 559
Query: 631 APDILILPSDLAPFAKVLQLEEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSY 452
APD+L+LPSDLAPF KVL L+E + + +NPGRLAKG GGTF E+ +Y
Sbjct: 560 APDVLLLPSDLAPFVKVLSLDES-SEEPKRFICMNPGRLAKGIGGGTFVEL-------NY 611
Query: 451 NQNENLTSLDEKTAVSIVRL 392
N++ +KT+ S++R+
Sbjct: 612 NED------TDKTSASLIRI 625
>ref|NP_001066483.1| Os12g0242900 [Oryza sativa Japonica Group]
gi|113648990|dbj|BAF29502.1| Os12g0242900, partial [Oryza
sativa Japonica Group]
Length = 400
Score = 305 bits (782), Expect = 2e-80
Identities = 157/320 (49%), Positives = 219/320 (68%), Gaps = 1/320 (0%)
Frame = -2
Query: 1348 VIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQ 1169
V+ S+P+ +D Q P AK+ +D + ++ R +S +IAAGP+TT+DNL F+
Sbjct: 97 VVSKLNDSIPNFVDAQ-LPRAKKQAVDSEGNQSSDVVSRV-LSSVIAAGPYTTSDNLLFE 154
Query: 1168 PLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMG 989
PL+EL+SY+ +K +LILMGPF+DS HP+IK+G +DK FQD+FL ++ +L+D+ +G
Sbjct: 155 PLQELISYASRKQPQLLILMGPFIDSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLG 214
Query: 988 PNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDV 809
N RVIL+PS RDAHHDFVFPQPAF+ + + ++ QITC+ANP L NEI G CT+D+
Sbjct: 215 HNVRVILIPSVRDAHHDFVFPQPAFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDI 274
Query: 808 LRHLSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILV 632
L+HLS EEISR G K DR+ R+ HIL Q+S+YPLYP +GVPLD + AL+I
Sbjct: 275 LKHLSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIAS 334
Query: 631 APDILILPSDLAPFAKVLQLEEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSY 452
APD+L+LPSDLAPF KVL L+E + + +NPGRLAKG GGTF E+ +Y
Sbjct: 335 APDVLLLPSDLAPFVKVLSLDES-SEEPKRFICMNPGRLAKGIGGGTFVEL-------NY 386
Query: 451 NQNENLTSLDEKTAVSIVRL 392
N++ +KT+ S++R+
Sbjct: 387 NED------TDKTSASLIRI 400
>gb|ABG21942.1| DNA polymerase alpha subunit B family protein, expressed [Oryza
sativa Japonica Group]
Length = 339
Score = 305 bits (782), Expect = 2e-80
Identities = 157/320 (49%), Positives = 219/320 (68%), Gaps = 1/320 (0%)
Frame = -2
Query: 1348 VIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQ 1169
V+ S+P+ +D Q P AK+ +D + ++ R +S +IAAGP+TT+DNL F+
Sbjct: 36 VVSKLNDSIPNFVDAQ-LPRAKKQAVDSEGNQSSDVVSRV-LSSVIAAGPYTTSDNLLFE 93
Query: 1168 PLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMG 989
PL+EL+SY+ +K +LILMGPF+DS HP+IK+G +DK FQD+FL ++ +L+D+ +G
Sbjct: 94 PLQELISYASRKQPQLLILMGPFIDSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLG 153
Query: 988 PNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDV 809
N RVIL+PS RDAHHDFVFPQPAF+ + + ++ QITC+ANP L NEI G CT+D+
Sbjct: 154 HNVRVILIPSVRDAHHDFVFPQPAFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDI 213
Query: 808 LRHLSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILV 632
L+HLS EEISR G K DR+ R+ HIL Q+S+YPLYP +GVPLD + AL+I
Sbjct: 214 LKHLSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIAS 273
Query: 631 APDILILPSDLAPFAKVLQLEEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSY 452
APD+L+LPSDLAPF KVL L+E + + +NPGRLAKG GGTF E+ +Y
Sbjct: 274 APDVLLLPSDLAPFVKVLSLDES-SEEPKRFICMNPGRLAKGIGGGTFVEL-------NY 325
Query: 451 NQNENLTSLDEKTAVSIVRL 392
N++ +KT+ S++R+
Sbjct: 326 NED------TDKTSASLIRI 339
>gb|ABA97199.2| DNA polymerase alpha subunit B family protein, expressed [Oryza
sativa Japonica Group] gi|215693905|dbj|BAG89104.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 368
Score = 305 bits (782), Expect = 2e-80
Identities = 157/320 (49%), Positives = 219/320 (68%), Gaps = 1/320 (0%)
Frame = -2
Query: 1348 VIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQ 1169
V+ S+P+ +D Q P AK+ +D + ++ R +S +IAAGP+TT+DNL F+
Sbjct: 65 VVSKLNDSIPNFVDAQ-LPRAKKQAVDSEGNQSSDVVSRV-LSSVIAAGPYTTSDNLLFE 122
Query: 1168 PLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMG 989
PL+EL+SY+ +K +LILMGPF+DS HP+IK+G +DK FQD+FL ++ +L+D+ +G
Sbjct: 123 PLQELISYASRKQPQLLILMGPFIDSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLG 182
Query: 988 PNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDV 809
N RVIL+PS RDAHHDFVFPQPAF+ + + ++ QITC+ANP L NEI G CT+D+
Sbjct: 183 HNVRVILIPSVRDAHHDFVFPQPAFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDI 242
Query: 808 LRHLSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILV 632
L+HLS EEISR G K DR+ R+ HIL Q+S+YPLYP +GVPLD + AL+I
Sbjct: 243 LKHLSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIAS 302
Query: 631 APDILILPSDLAPFAKVLQLEEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSY 452
APD+L+LPSDLAPF KVL L+E + + +NPGRLAKG GGTF E+ +Y
Sbjct: 303 APDVLLLPSDLAPFVKVLSLDES-SEEPKRFICMNPGRLAKGIGGGTFVEL-------NY 354
Query: 451 NQNENLTSLDEKTAVSIVRL 392
N++ +KT+ S++R+
Sbjct: 355 NED------TDKTSASLIRI 368
>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-like [Fragaria vesca subsp.
vesca]
Length = 620
Score = 305 bits (781), Expect = 3e-80
Identities = 155/293 (52%), Positives = 209/293 (71%), Gaps = 1/293 (0%)
Frame = -2
Query: 1354 SRVIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLA 1175
S++IDS P+S + +D H AK+ +DP+S P+ +S++IA+GPFTT DNL
Sbjct: 318 SKMIDSIPLSAAAD-EDLHP--AKKPALDPESLSIGLAIPQPELSVIIASGPFTTIDNLL 374
Query: 1174 FQPLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDD 995
F+PL+ELL+Y+ +K +LIL+GPF+DS+HP+IK+G +D+ F D+F ++ RL+DY +
Sbjct: 375 FEPLKELLAYANRKLPQLLILLGPFIDSEHPEIKKGNVDRTFDDIFQFEILRRLQDYAEY 434
Query: 994 MGPNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTI 815
MG +ARV+LVPS RDA+HDFVFPQP F+ H D + QIT + NPG+L N++ +G C++
Sbjct: 435 MGSHARVVLVPSVRDANHDFVFPQPPFDIHPPD-LKHQITSLTNPGMLEANQVKIGCCSV 493
Query: 814 DVLRHLSSEEISR-NSGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDI 638
D+L+HLS EE SR G + DR+SRLA HIL QRSFYPLYP A VPLD +PEAL+I
Sbjct: 494 DILKHLSGEETSRFPKDGTSRDRMSRLANHILGQRSFYPLYPPAESVPLDFSLAPEALNI 553
Query: 637 LVAPDILILPSDLAPFAKVLQLEEDLKTNENKCVSINPGRLAKGASGGTFAEI 479
+ PDILILPSDL F KVL L E KC+ +NPGRL+KG GGTF E+
Sbjct: 554 SLIPDILILPSDLKYFVKVLSLGEG--EPPVKCICVNPGRLSKGEGGGTFVEL 604
>gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indica Group]
Length = 625
Score = 304 bits (778), Expect = 6e-80
Identities = 156/320 (48%), Positives = 219/320 (68%), Gaps = 1/320 (0%)
Frame = -2
Query: 1348 VIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQ 1169
V+ S+P+ +D Q P AK+ +D + ++ R +S +IAAGP+TT+DNL F+
Sbjct: 322 VVSKLNDSIPNFVDAQ-LPRAKKQAVDSEGNQSSDVVSRV-LSSVIAAGPYTTSDNLLFE 379
Query: 1168 PLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMG 989
PL+EL+SY+ +K +LILMGPF+DS HP+IK+G +D+ FQD+FL ++ +L+D+ +G
Sbjct: 380 PLQELISYASRKQPQLLILMGPFIDSDHPEIKKGAVDQSFQDIFLFEILRKLQDFTQYLG 439
Query: 988 PNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDV 809
N RVIL+PS RDAHHDFVFPQPAF+ + + ++ QITC+ANP L NEI G CT+D+
Sbjct: 440 HNVRVILIPSVRDAHHDFVFPQPAFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDI 499
Query: 808 LRHLSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILV 632
L+HLS EEISR G K DR+ R+ HIL Q+S+YPLYP +GVPLD + AL+I
Sbjct: 500 LKHLSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIAS 559
Query: 631 APDILILPSDLAPFAKVLQLEEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSY 452
APD+L+LPSDLAPF KVL L+E + + +NPGRLAKG GGTF E+ +Y
Sbjct: 560 APDVLLLPSDLAPFVKVLSLDES-SEEPKRFICMNPGRLAKGIGGGTFVEL-------NY 611
Query: 451 NQNENLTSLDEKTAVSIVRL 392
N++ +KT+ S++R+
Sbjct: 612 NED------TDKTSASLIRI 625
>ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum lycopersicum]
Length = 617
Score = 303 bits (775), Expect = 1e-79
Identities = 149/292 (51%), Positives = 202/292 (69%)
Frame = -2
Query: 1354 SRVIDSYPISVPSQMDDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLA 1175
S+++D P+S S ++ P K+ +D Q + +S++IAAGPFTT DNL
Sbjct: 314 SKIVDHIPLSASST---ENLPPTKKQAMDQYLQSANAVAAMPELSLIIAAGPFTTVDNLF 370
Query: 1174 FQPLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDD 995
F+PL ELLSY+R+K ++IL+GPF+DS HP+IK+GT+D+ F ++F +++ RLRDY +
Sbjct: 371 FEPLAELLSYARRKQPQLIILLGPFIDSDHPEIKKGTVDRTFDEIFQDEILARLRDYVEY 430
Query: 994 MGPNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTI 815
MG ARV+LVPS RDA HDFV+PQPAF+ D + QI + NPG+ NE+ V CT+
Sbjct: 431 MGSAARVVLVPSVRDASHDFVYPQPAFDIQLPD-LEHQINSITNPGIFCANEVKVACCTV 489
Query: 814 DVLRHLSSEEISRNSGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDIL 635
DVL+ LS+EEISRN G + R++ LA HILNQRSFYPLYP A GVP+D +PEAL +
Sbjct: 490 DVLKQLSAEEISRNPQGGSKQRMTTLANHILNQRSFYPLYPPAEGVPIDFSLAPEALQMS 549
Query: 634 VAPDILILPSDLAPFAKVLQLEEDLKTNENKCVSINPGRLAKGASGGTFAEI 479
PDILILPSDLA F +V+ L E + E KC+ +NPGRL++G GG F E+
Sbjct: 550 TDPDILILPSDLAHFVRVVSLGERSEGEEVKCICVNPGRLSRGEGGGFFVEL 601
>ref|XP_004960699.1| PREDICTED: DNA polymerase alpha subunit B-like [Setaria italica]
Length = 627
Score = 301 bits (771), Expect = 4e-79
Identities = 160/325 (49%), Positives = 220/325 (67%), Gaps = 4/325 (1%)
Frame = -2
Query: 1354 SRVIDSYPISVPSQMDDQHAPLAKRITIDPKSQ---INASKTPRGNISMLIAAGPFTTTD 1184
S++IDS P+SV +Q+ P AK+ +D + +A PR +S +IAAGP+TTTD
Sbjct: 323 SKLIDSIPVSVDAQL-----PSAKKQAVDNGNHHQNSDAGTLPRA-LSSVIAAGPYTTTD 376
Query: 1183 NLAFQPLEELLSYSRKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDY 1004
NL F+PL+ELLSY+ +K +LILMGPF+DS HP IK+GT+D+ F D+F ++ +++D+
Sbjct: 377 NLLFEPLQELLSYACRKQPQLLILMGPFIDSDHPDIKKGTVDQTFHDIFHFEILRKIQDF 436
Query: 1003 CDDMGPNARVILVPSTRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGV 824
+G RVIL+PS RDAHHDFVFPQPAF+ + + ++ QI+C+ANP L N+I G
Sbjct: 437 TQYLGNTVRVILIPSVRDAHHDFVFPQPAFDLNLPEDITHQISCLANPSLFSCNQIHFGC 496
Query: 823 CTIDVLRHLSSEEISRNSG-GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEA 647
CT+D+L+ LS EEISR GK DR+ RLA HIL Q+S+YPLYP A+GVPLD + EA
Sbjct: 497 CTVDILKQLSGEEISRKPPVGKPGDRIGRLATHILKQQSYYPLYPPAAGVPLDFSLAKEA 556
Query: 646 LDILVAPDILILPSDLAPFAKVLQLEEDLKTNENKCVSINPGRLAKGASGGTFAEILIQE 467
L+I APD+L+L SDLAPF KVL L E + + + +NPGRLAKG GGTF E+
Sbjct: 557 LEISSAPDVLLLTSDLAPFVKVLSLGEGSDV-QKQFICMNPGRLAKGIGGGTFVELY--- 612
Query: 466 REQSYNQNENLTSLDEKTAVSIVRL 392
YN++ ++T SI+R+
Sbjct: 613 ----YNED------TDRTKASIIRI 627