BLASTX nr result

ID: Ephedra25_contig00024411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00024411
         (401 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001779466.1| predicted protein [Physcomitrella patens] gi...   114   1e-23
ref|XP_002953891.1| hypothetical protein VOLCADRAFT_121227 [Volv...    71   1e-10
ref|XP_002506035.1| predicted protein [Micromonas sp. RCC299] gi...    67   2e-09
ref|WP_020529249.1| hypothetical protein [Flexithrix dorotheae]        64   2e-08
ref|XP_005847446.1| hypothetical protein CHLNCDRAFT_134354 [Chlo...    59   9e-07

>ref|XP_001779466.1| predicted protein [Physcomitrella patens]
           gi|162669151|gb|EDQ55744.1| predicted protein
           [Physcomitrella patens]
          Length = 240

 Score =  114 bits (285), Expect = 1e-23
 Identities = 57/131 (43%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
 Frame = -2

Query: 394 VTELQLQKLRQICSEE-SVNFGEEDMVQVENLSTVFYQCCCLEKTISTTKVSLNSPVDFS 218
           ++ L L++LR ICSEE S        V+V+ LS V +  CCLE+T+ TT V+L  P D  
Sbjct: 91  LSRLDLERLRDICSEENSYLISTTPPVEVDKLSIVLFSNCCLEQTLMTTDVTLALPADLR 150

Query: 217 EPDHSEKMNVKKVMDEFAEENLSKYYPHVCKAGHRSAHYRNPRVGYTIVHFLKCPPNSLV 38
            P+   + +V+ V+DEF  ENL  YY +  K G+RSAHYR  + G T+VHFL   P ++ 
Sbjct: 151 PPNSEHRASVRSVLDEFRRENLDNYYFNASKDGNRSAHYRGFKAGVTLVHFLTSIPRAIA 210

Query: 37  RFQENFEAAMP 5
           RF+E  E  +P
Sbjct: 211 RFRERVERELP 221


>ref|XP_002953891.1| hypothetical protein VOLCADRAFT_121227 [Volvox carteri f.
           nagariensis] gi|300260703|gb|EFJ44920.1| hypothetical
           protein VOLCADRAFT_121227 [Volvox carteri f.
           nagariensis]
          Length = 271

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 45/117 (38%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
 Frame = -2

Query: 394 VTELQLQKLRQICSEES---VNFGEEDMVQVENLSTVFYQCCCLEKTI--STTKVSLNSP 230
           +T  QL +L  IC EES   V   +E  V V+ L+ VFYQC CLE+ +   T  +    P
Sbjct: 95  LTPEQLDRLNAICREESAKLVQDSDEQAVLVDKLTVVFYQCRCLERRMLEHTIMMRNGQP 154

Query: 229 VDFSEPDHSEKMNVKKVMDEFAEENLSKYYPHVCKAGHRSAHYRNPRVGYTIVHFLK 59
           +D   PD SE+  V+ V+   +E +   Y+    K G R +HYRN  +G T+VH L+
Sbjct: 155 LDARPPDPSEQERVRGVV---SEADSPDYWFLASKDGSRESHYRNSYLGVTLVHDLE 208


>ref|XP_002506035.1| predicted protein [Micromonas sp. RCC299]
           gi|226521306|gb|ACO67293.1| predicted protein
           [Micromonas sp. RCC299]
          Length = 487

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
 Frame = -2

Query: 319 VQVENLSTVFYQCCCLEKTISTTKVSLNS---PVDFSEPDHSEKMNVKKVMDEFAEENLS 149
           V V+ LS V +QC  LE+ +S   VS  +     +   P   E   V  V+ E + E L 
Sbjct: 358 VPVDGLSVVLFQCRSLERVLSEHVVSFRTNGIARNRDRPSRDETAVVDAVLRESSRECLE 417

Query: 148 KYYPHVCKAGHRSAHYRNPRVGYTIVHFLKCPPNSLVRFQENFEAAMPG 2
           KY+P   + G R  HYR+ + G T+V  L+ PP ++  F+   +AA+PG
Sbjct: 418 KYWPLAARDGGREPHYRDDKFGATLVARLRRPPRAVAEFRAAVDAALPG 466


>ref|WP_020529249.1| hypothetical protein [Flexithrix dorotheae]
          Length = 232

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
 Frame = -2

Query: 370 LRQICSEESVNFGEEDMVQVENLSTVFYQCCCLEKTISTTKVSLNSPVDFSEPDHSEKMN 191
           L+ IC E S          +  LS V  Q    E+ +ST K+ LNS ++  E D   K  
Sbjct: 87  LKNICDEMSTKIDAYSGFTIRELSVVLIQDRTAERRLSTFKIPLNSEME-PEIDFEAKA- 144

Query: 190 VKKVMDEFAEENLSKYYPHVCKAGHRSAHYRNPRVGYTIVHFLKC-PPNSLVRFQENFEA 14
           V+KV+ EF  ENLS Y   +   GHR +HY+ P +  T+V+ L    P+    F    + 
Sbjct: 145 VEKVIQEFEYENLSIYAEKIKMEGHRQSHYQQPYICSTLVYDLPANQPDYFSHFANVVDK 204

Query: 13  AMPG 2
           A+PG
Sbjct: 205 ALPG 208


>ref|XP_005847446.1| hypothetical protein CHLNCDRAFT_134354 [Chlorella variabilis]
           gi|307107100|gb|EFN55344.1| hypothetical protein
           CHLNCDRAFT_134354 [Chlorella variabilis]
          Length = 270

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
 Frame = -2

Query: 394 VTELQLQKLRQICSEESVNFGEEDMV--------QVENLSTVFYQCCCLEKTISTTKVSL 239
           +T  QL  L QIC EES  F ++  V         V++ S   ++C  LE+ +S   V  
Sbjct: 85  LTPDQLAVLCQICKEESAGFEQQQGVGGAEGLKLSVDSASVALFECRSLERLLSCQHVVF 144

Query: 238 NSPVDFSEPDHSEKMNVKKVMDEFAEENLSKYYPHVCKAGHRSAHYRNPRVGYTIVHFLK 59
              VD  +P   E+  V  ++   AE     Y+    + G+R AHYR   +G T++H L+
Sbjct: 145 QGGVDAVQPSAQERARVTGIL---AEPEAPNYWFEASRDGNREAHYRGRHLGATLMHPLE 201


Top