BLASTX nr result

ID: Ephedra25_contig00024406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00024406
         (421 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001774071.1| predicted protein [Physcomitrella patens] gi...    75   9e-12
ref|XP_001783953.1| predicted protein [Physcomitrella patens] gi...    71   1e-10

>ref|XP_001774071.1| predicted protein [Physcomitrella patens] gi|162674617|gb|EDQ61123.1|
            predicted protein [Physcomitrella patens]
          Length = 3108

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 49/141 (34%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
 Frame = -1

Query: 421  RHFLQNDIRWAKGLWRDLCLVVGDISKNLPRSPITNSFAPLKCLKSYVEDDQECLRMIEQ 242
            R  L++D RW +G +  LCL  GD   N PR P   SFA L CLK++  D+     +I+Q
Sbjct: 1439 RKCLRDDKRWLEGFFWALCLAAGDALANPPRGPAPASFAALSCLKNFAGDEDLHELVIKQ 1498

Query: 241  XXXXXXXXXXXXXXGSRLKKYDSNSSLIHSAADVLGSWVRTLNRVG-QFSKAKQNNSIPV 65
                           + LK  D+ S+L++ AADVLG+ VR L +     SK  Q     +
Sbjct: 1499 ALYLPLLLLVIPPGDAALKARDTKSALLYLAADVLGTLVRVLKQAKVSRSKLIQQQERSI 1558

Query: 64   SFKMIPHLLIQSLGEKHGADK 2
               +IP  L+  L    G DK
Sbjct: 1559 MTYLIPGPLLACLEHPEGPDK 1579


>ref|XP_001783953.1| predicted protein [Physcomitrella patens] gi|162664514|gb|EDQ51231.1|
            predicted protein [Physcomitrella patens]
          Length = 3027

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
 Frame = -1

Query: 412  LQNDIRWAKGLWRDLCLVVGDISKNLPRSPITNSFAPLKCLKSYVEDDQECLRMIEQXXX 233
            L+ D RW +G    LC   GD   N PR P   SFA L CLK++  D+     +++Q   
Sbjct: 1438 LREDNRWQEGFLLALCSAAGDALANPPRGPAPKSFASLSCLKNFAGDEDLYELVLKQGLY 1497

Query: 232  XXXXXXXXXXXGSRLKKYDSNSSLIHSAADVLGSWVRTLNRV-GQFSKAKQNNSIPVSFK 56
                        + LK  D+ S+L++SAADVLG+ +R L +  G      Q     +   
Sbjct: 1498 LPLLLLAIPPAETALKARDTKSALLYSAADVLGTLIRILKQTGGARPNPIQQQQRSLMTH 1557

Query: 55   MIPHLLIQSLGEKHGADK 2
            +IP  L+  L    G DK
Sbjct: 1558 LIPGPLLACLEHTEGPDK 1575


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