BLASTX nr result

ID: Ephedra25_contig00024396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00024396
         (625 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002591203.1| hypothetical protein BRAFLDRAFT_105405 [Bran...    57   3e-06
gb|ELW68510.1| hypothetical protein TREES_T100008813 [Tupaia chi...    56   1e-05

>ref|XP_002591203.1| hypothetical protein BRAFLDRAFT_105405 [Branchiostoma floridae]
           gi|229276406|gb|EEN47214.1| hypothetical protein
           BRAFLDRAFT_105405 [Branchiostoma floridae]
          Length = 477

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 13/127 (10%)
 Frame = +1

Query: 25  SMQEDPKFVSKVERKKDLEIGDDNELQEDSAILSEDE-------KDQENLDKEE-----L 168
           S+QED +     E ++D EI  D+E+QED  I  +DE       +D + +  ++     +
Sbjct: 130 SIQEDDEIQDDDEIQEDDEIQGDDEIQEDDEIQGDDEIQEVHWIQDDDEIQADDVIPDLI 189

Query: 169 QGRPKSSGNDELVEEQEILVNDKFQELTNSPGNDEVVEEQEILVKDEFQEL-RDSLGTDE 345
           Q      G+  + E+ EI  +D+ QE     G+DE+ E+ EI   DE Q+   DS+  D+
Sbjct: 190 QQDGSIQGDQSIQEDDEIQDDDEIQEDDEIQGDDEIQEDDEIQGDDEIQDYDSDSIQEDD 249

Query: 346 LVEDQDY 366
            +++  Y
Sbjct: 250 EIQEDAY 256


>gb|ELW68510.1| hypothetical protein TREES_T100008813 [Tupaia chinensis]
          Length = 274

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 29/121 (23%), Positives = 70/121 (57%)
 Frame = +1

Query: 55  KVERKKDLEIGDDNELQEDSAILSEDEKDQENLDKEELQGRPKSSGNDELVEEQEILVND 234
           ++E K++ EI ++ E++E+      +EK+ E  ++EE++   +    +E+ EE+EI   +
Sbjct: 12  EMEEKEEEEIEEEEEVEEEEV----EEKEMEEEEEEEIEEEEEIEEEEEIEEEEEIEEEE 67

Query: 235 KFQELTNSPGNDEVVEEQEILVKDEFQELRDSLGTDELVEDQDYFAKNDFQEDRAKQFEM 414
           + +E       +E+ EE+EI  ++E +E  +    +E+ E+++   + + +++  K+ E+
Sbjct: 68  EIEEEEEIEEEEEIEEEEEIEEEEEIEEEMEEEVEEEVEEEEEMEEQMEEEKEEEKEEEI 127

Query: 415 E 417
           E
Sbjct: 128 E 128


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