BLASTX nr result
ID: Ephedra25_contig00024220
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00024220
(717 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16859.1| unknown [Picea sitchensis] 110 6e-22
ref|XP_006352367.1| PREDICTED: transcription initiation factor I... 69 1e-09
ref|XP_006352364.1| PREDICTED: transcription initiation factor I... 69 1e-09
ref|XP_004250258.1| PREDICTED: transcription initiation factor I... 69 1e-09
gb|EPS63331.1| hypothetical protein M569_11453, partial [Genlise... 66 1e-08
ref|XP_004486214.1| PREDICTED: transcription initiation factor I... 65 3e-08
ref|XP_006467340.1| PREDICTED: transcription initiation factor I... 64 4e-08
gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus... 64 4e-08
ref|XP_004293352.1| PREDICTED: transcription initiation factor I... 64 4e-08
ref|XP_004152016.1| PREDICTED: transcription initiation factor I... 64 4e-08
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr... 64 5e-08
gb|AAX95773.1| putative transcription initiation factor [Oryza s... 63 8e-08
ref|NP_001064266.1| Os10g0188100 [Oryza sativa Japonica Group] g... 63 8e-08
gb|AAN04997.1| putative transcription initiation factor [Oryza s... 63 8e-08
gb|EAY77905.1| hypothetical protein OsI_32946 [Oryza sativa Indi... 63 8e-08
gb|AAR28013.1| mutant TFIIF-alpha [Arabidopsis thaliana] 63 8e-08
sp|Q9SU25.1|T2FA_ARATH RecName: Full=Transcription initiation fa... 63 8e-08
gb|ESW19654.1| hypothetical protein PHAVU_006G143600g [Phaseolus... 63 1e-07
gb|EMJ12738.1| hypothetical protein PRUPE_ppa003970mg [Prunus pe... 63 1e-07
ref|XP_006586768.1| PREDICTED: transcription initiation factor I... 62 1e-07
>gb|ABR16859.1| unknown [Picea sitchensis]
Length = 366
Score = 110 bits (274), Expect = 6e-22
Identities = 63/182 (34%), Positives = 98/182 (53%), Gaps = 7/182 (3%)
Frame = +1
Query: 193 KDAECQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTS 372
++A+C C +KKDLYAS C H+DP+C+ CA A + + C C + +T+V RR+ +K
Sbjct: 6 ENAKCMKCEAKKDLYASQCKHLDPICITCATVMAKDKTPCPTCLQLVTKVFRRYDLKSYL 65
Query: 373 QKGWSGFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDN-------QKRWACYRDGAR 531
+ F+ P+ S D+ V++Q + TDN ++ W YR+GA
Sbjct: 66 PGNATKFLAKFSPK----PSGSVDIVGVDKQPAAGKNTTDNKYFRKSDRRSWIMYREGAE 121
Query: 532 EIRFRIKSNKSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIK 711
R +K++ TRP ILE++K ++GK K + Y+M QF+ S+ F VYPI
Sbjct: 122 GKRKNLKTD--TRPWILENVKDKGKYRGKAKPVDNNMYYMVQFDGR---ISDPFVVYPIN 176
Query: 712 SW 717
SW
Sbjct: 177 SW 178
>ref|XP_006352367.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X4 [Solanum tuberosum]
Length = 535
Score = 69.3 bits (168), Expect = 1e-09
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 2/173 (1%)
Frame = +1
Query: 205 CQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQKGW 384
C C S DLY S C H+ LCL C + A+ C EC P+T++IR + V+ S
Sbjct: 11 CSRCGSSSDLYGSSCKHLT-LCLSCGKNMAETRDKCYECGTPVTRLIREYNVRACSSNDK 69
Query: 385 SGFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIRFRIKSN 558
+ F+ L F + N +W ++G R++ ++
Sbjct: 70 NHFIARF------------------ASGLPKFSKKKNDSKWTLQKEGLQGRQVTDTLREK 111
Query: 559 KSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIKSW 717
+P +LED F G + A +Y++ + E E F++ P SW
Sbjct: 112 YKNKPWLLEDETGQFQFHGHLEGAQSAQYYLLMMQGE-----ELFAI-PAGSW 158
>ref|XP_006352364.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Solanum tuberosum]
gi|565371548|ref|XP_006352365.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X2 [Solanum tuberosum]
gi|565371550|ref|XP_006352366.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X3 [Solanum tuberosum]
Length = 538
Score = 69.3 bits (168), Expect = 1e-09
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 2/173 (1%)
Frame = +1
Query: 205 CQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQKGW 384
C C S DLY S C H+ LCL C + A+ C EC P+T++IR + V+ S
Sbjct: 11 CSRCGSSSDLYGSSCKHLT-LCLSCGKNMAETRDKCYECGTPVTRLIREYNVRACSSNDK 69
Query: 385 SGFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIRFRIKSN 558
+ F+ L F + N +W ++G R++ ++
Sbjct: 70 NHFIARF------------------ASGLPKFSKKKNDSKWTLQKEGLQGRQVTDTLREK 111
Query: 559 KSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIKSW 717
+P +LED F G + A +Y++ + E E F++ P SW
Sbjct: 112 YKNKPWLLEDETGQFQFHGHLEGAQSAQYYLLMMQGE-----ELFAI-PAGSW 158
>ref|XP_004250258.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Solanum lycopersicum]
Length = 534
Score = 69.3 bits (168), Expect = 1e-09
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 2/173 (1%)
Frame = +1
Query: 205 CQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQKGW 384
C C S DLY S C H+ LCL C + A+ C EC P+T++IR + V+ S
Sbjct: 11 CSRCGSSSDLYGSSCKHLT-LCLSCGKNMAETRDKCYECGTPVTRLIREYNVRACSSNDK 69
Query: 385 SGFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIRFRIKSN 558
+ F+ L F + N +W ++G R++ ++
Sbjct: 70 NHFIARF------------------ASGLPKFSKKKNDSKWTLQKEGLQGRQVTDTLREK 111
Query: 559 KSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIKSW 717
+P +LED F G + A +Y++ + E E F++ P SW
Sbjct: 112 YKNKPWLLEDETGQFQFHGHLEGAQSAQYYLLMMQGE-----ELFAI-PAGSW 158
>gb|EPS63331.1| hypothetical protein M569_11453, partial [Genlisea aurea]
Length = 371
Score = 65.9 bits (159), Expect = 1e-08
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 2/173 (1%)
Frame = +1
Query: 205 CQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQKGW 384
C C S +LY S C H+ LCL C ++ A+ + C EC PIT +IR + V+ +
Sbjct: 16 CGGCGSMTELYGSTCKHLT-LCLSCGKRMAENRAKCYECGTPITVLIREYNVRASCSNEK 74
Query: 385 SGFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIRFRIKSN 558
+ F+G A+ P+ N+ K W+ ++G R++ ++
Sbjct: 75 NYFIG-------RFATGLPNFKKKNENK------------WSMQKEGLQGRQVTDTLREK 115
Query: 559 KSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIKSW 717
RP +LED + G+ + + Y++ + + F P SW
Sbjct: 116 YKNRPWLLEDETGQYQYNGQLEGSQSATYYLLMLQ------GKEFVAIPAGSW 162
>ref|XP_004486214.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Cicer arietinum]
Length = 538
Score = 64.7 bits (156), Expect = 3e-08
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 2/173 (1%)
Frame = +1
Query: 205 CQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQKGW 384
C C S DLY S C H+ LCL C + A+ + C +C +T++IR + V+ +S
Sbjct: 11 CSGCRSTTDLYGSNCKHMT-LCLTCGKTMAENRAKCYDCGATLTRLIREYNVRASSANDK 69
Query: 385 SGFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIRFRIKSN 558
+ F+G + D +++K + + +W +DG RE+ ++
Sbjct: 70 NYFIGRFM----------TGLPDFSKKKSA-------ENKWCLQKDGLQRREVTDALREK 112
Query: 559 KSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIKSW 717
RP +LED ++G + + Y++ E + F P SW
Sbjct: 113 FKNRPWLLEDETGQSQYQGHLEGSQSATYYLLMKE------KKEFVAXPAGSW 159
>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Citrus sinensis]
gi|568825955|ref|XP_006467341.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X2 [Citrus sinensis]
Length = 538
Score = 64.3 bits (155), Expect = 4e-08
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 2/174 (1%)
Frame = +1
Query: 202 ECQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQKG 381
+C C S+ DLY S C H+ LCL C + A+ + C +C +T++IR + V+ ++
Sbjct: 10 QCSGCGSQADLYGSNCKHMT-LCLTCGKTMAENKAKCFDCGAIVTRLIREYNVRPSNSSD 68
Query: 382 WSGFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIRFRIKS 555
+ F+G S P SF + + + +W ++DG R++ ++
Sbjct: 69 KNYFIG-------RFVSGLP----------SFSKKKNAENKWTLHKDGLQGRQVTDTLRE 111
Query: 556 NKSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIKSW 717
+P +LED ++G + + Y++ + S+ F P SW
Sbjct: 112 KYKNKPWMLEDETGQAQYQGHLEGSQSATYYLLV------MHSKEFVAIPAGSW 159
>gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
Length = 540
Score = 64.3 bits (155), Expect = 4e-08
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 2/173 (1%)
Frame = +1
Query: 205 CQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQKGW 384
C C S DLY S C H+ LCL C + A+ + C +C +T++IR + V+ +S
Sbjct: 11 CGGCGSTTDLYGSNCKHMT-LCLTCGKTMAENKAKCFDCGATVTRLIREYSVRASSGSDK 69
Query: 385 SGFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIRFRIKSN 558
F+G S PD F + + +W+ ++G +R++ ++
Sbjct: 70 HYFIG-------RFVSGLPD----------FSKKKSAENKWSLQKEGLQSRQVTDALREK 112
Query: 559 KSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIKSW 717
+P +LED F+G + A Y++ E + F P SW
Sbjct: 113 YKNKPWLLEDETGQSQFQGHLEGAQSATYYLLMME------RKEFVAIPAGSW 159
>ref|XP_004293352.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Fragaria vesca subsp. vesca]
Length = 550
Score = 64.3 bits (155), Expect = 4e-08
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 9/180 (5%)
Frame = +1
Query: 205 CQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQKGW 384
C C S DLY S C H+ LC C + A+ + C +C +T++IR + V+ ++
Sbjct: 11 CGGCGSTSDLYGSNCKHM-TLCCACGKTMAENKAKCYDCGAVVTRLIREYNVRASTASEK 69
Query: 385 SGFVGI----LPPEQQEDASED-----PDMSDVNQQKLSFFPETDNQKRWACYRDGAREI 537
S F+G LP ++ ++E+ D+SD + K + +QK++ R
Sbjct: 70 SYFIGRFVTGLPNFSKKKSAENKWTLRKDLSDPRRSK---DKDGQDQKKYKDVRPPTEAS 126
Query: 538 RFRIKSNKSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIKSW 717
R ++K+ +P +LED + G+ + A Y++ + + FS P SW
Sbjct: 127 REKLKN----KPWVLEDETGQSQYNGQLEGAQSAIYYLLMMQ------GKEFSAIPAGSW 176
>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Cucumis sativus] gi|449517383|ref|XP_004165725.1|
PREDICTED: transcription initiation factor IIF subunit
alpha-like [Cucumis sativus]
Length = 538
Score = 64.3 bits (155), Expect = 4e-08
Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 2/173 (1%)
Frame = +1
Query: 205 CQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQKGW 384
C C S +LY S C H+ LCL C + A+ C +C +T++IR + V+ ++
Sbjct: 11 CSGCGSTTELYGSNCKHMT-LCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDK 69
Query: 385 SGFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIRFRIKSN 558
+ F+G MS + +F + + + +W+ Y++G R++ ++
Sbjct: 70 NYFIGRF-------------MSGLP----NFSKKRNAENKWSLYKEGLQGRQLSDALREK 112
Query: 559 KSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIKSW 717
RP +LED F+G + + Y++ + + F+ P SW
Sbjct: 113 YKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQ------GKEFTAIPAGSW 159
>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
gi|567915083|ref|XP_006449855.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
gi|557552465|gb|ESR63094.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
gi|557552466|gb|ESR63095.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
Length = 538
Score = 63.9 bits (154), Expect = 5e-08
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 2/174 (1%)
Frame = +1
Query: 202 ECQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQKG 381
+C C S+ DLY S C H+ LCL C + A+ + C +C +T++IR + V+ ++
Sbjct: 10 QCSGCGSQVDLYGSNCKHMT-LCLTCGKTMAENKAKCFDCGAIVTRLIREYNVRPSNSSD 68
Query: 382 WSGFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIRFRIKS 555
+ F+G S P SF + + + +W ++DG R++ ++
Sbjct: 69 KNYFIG-------RFVSGLP----------SFSKKKNAENKWTLHKDGLQGRQVTDTLRE 111
Query: 556 NKSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIKSW 717
+P +LED ++G + + Y++ + S+ F P SW
Sbjct: 112 KYKNKPWMLEDETGQAQYQGHLEGSQSATYYLLV------MHSKEFVAIPAGSW 159
>gb|AAX95773.1| putative transcription initiation factor [Oryza sativa Japonica
Group] gi|78708004|gb|ABB46979.1| mutant TFIIF-alpha,
putative, expressed [Oryza sativa Japonica Group]
Length = 531
Score = 63.2 bits (152), Expect = 8e-08
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Frame = +1
Query: 199 AECQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVK--RTS 372
A C+ C S DLY + C H LC C + A + C C+ PIT +IR + V+ T+
Sbjct: 10 AACEGCGSPSDLYGTSCKHTT-LCSSCGKSMALSGARCLVCSAPITNLIREYNVRANATT 68
Query: 373 QKGWS--GFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIR 540
K +S FV LPP ++ ++E+ +W+ +++G R+I
Sbjct: 69 DKSFSIGRFVTGLPPFSKKKSAEN---------------------KWSLHKEGLQGRQIP 107
Query: 541 FRIKSNKSTRPLILEDLKADRTFKGKCK--LANLKRYFMAQFEPEARIFSETFSVYPIKS 714
++ + +P ILED ++G+ + ++ Y++ + + F YP S
Sbjct: 108 ENMREKYNRKPWILEDETGQYQYQGQMEGSQSSTATYYLLM------MHGKEFHAYPAGS 161
Query: 715 W 717
W
Sbjct: 162 W 162
>ref|NP_001064266.1| Os10g0188100 [Oryza sativa Japonica Group]
gi|62733662|gb|AAX95774.1| putative transcription
initiation factor [Oryza sativa Japonica Group]
gi|78708005|gb|ABB46980.1| mutant TFIIF-alpha, putative,
expressed [Oryza sativa Japonica Group]
gi|113638875|dbj|BAF26180.1| Os10g0188100 [Oryza sativa
Japonica Group] gi|215713568|dbj|BAG94705.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215769198|dbj|BAH01427.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 529
Score = 63.2 bits (152), Expect = 8e-08
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Frame = +1
Query: 199 AECQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVK--RTS 372
A C+ C S DLY + C H LC C + A + C C+ PIT +IR + V+ T+
Sbjct: 10 AACEGCGSPSDLYGTSCKHTT-LCSSCGKSMALSGARCLVCSAPITNLIREYNVRANATT 68
Query: 373 QKGWS--GFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIR 540
K +S FV LPP ++ ++E+ +W+ +++G R+I
Sbjct: 69 DKSFSIGRFVTGLPPFSKKKSAEN---------------------KWSLHKEGLQGRQIP 107
Query: 541 FRIKSNKSTRPLILEDLKADRTFKGKCK--LANLKRYFMAQFEPEARIFSETFSVYPIKS 714
++ + +P ILED ++G+ + ++ Y++ + + F YP S
Sbjct: 108 ENMREKYNRKPWILEDETGQYQYQGQMEGSQSSTATYYLLM------MHGKEFHAYPAGS 161
Query: 715 W 717
W
Sbjct: 162 W 162
>gb|AAN04997.1| putative transcription initiation factor [Oryza sativa Japonica
Group] gi|31430629|gb|AAP52517.1| mutant TFIIF-alpha,
putative, expressed [Oryza sativa Japonica Group]
Length = 532
Score = 63.2 bits (152), Expect = 8e-08
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Frame = +1
Query: 199 AECQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVK--RTS 372
A C+ C S DLY + C H LC C + A + C C+ PIT +IR + V+ T+
Sbjct: 10 AACEGCGSPSDLYGTSCKHTT-LCSSCGKSMALSGARCLVCSAPITNLIREYNVRANATT 68
Query: 373 QKGWS--GFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIR 540
K +S FV LPP ++ ++E+ +W+ +++G R+I
Sbjct: 69 DKSFSIGRFVTGLPPFSKKKSAEN---------------------KWSLHKEGLQGRQIP 107
Query: 541 FRIKSNKSTRPLILEDLKADRTFKGKCK--LANLKRYFMAQFEPEARIFSETFSVYPIKS 714
++ + +P ILED ++G+ + ++ Y++ + + F YP S
Sbjct: 108 ENMREKYNRKPWILEDETGQYQYQGQMEGSQSSTATYYLLM------MHGKEFHAYPAGS 161
Query: 715 W 717
W
Sbjct: 162 W 162
>gb|EAY77905.1| hypothetical protein OsI_32946 [Oryza sativa Indica Group]
Length = 532
Score = 63.2 bits (152), Expect = 8e-08
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Frame = +1
Query: 199 AECQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVK--RTS 372
A C+ C S DLY + C H LC C + A + C C+ PIT +IR + V+ T+
Sbjct: 10 AACEGCGSPSDLYGTSCKHTT-LCSSCGKSMALSGARCLVCSAPITNLIREYNVRANATT 68
Query: 373 QKGWS--GFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIR 540
K +S FV LPP ++ ++E+ +W+ +++G R+I
Sbjct: 69 DKSFSIGRFVTGLPPFSKKKSAEN---------------------KWSLHKEGLQGRQIP 107
Query: 541 FRIKSNKSTRPLILEDLKADRTFKGKCK--LANLKRYFMAQFEPEARIFSETFSVYPIKS 714
++ + +P ILED ++G+ + ++ Y++ + + F YP S
Sbjct: 108 ENMREKYNRKPWILEDETGQYQYQGQMEGSQSSTATYYLLM------MHGKEFHAYPAGS 161
Query: 715 W 717
W
Sbjct: 162 W 162
>gb|AAR28013.1| mutant TFIIF-alpha [Arabidopsis thaliana]
Length = 640
Score = 63.2 bits (152), Expect = 8e-08
Identities = 45/178 (25%), Positives = 78/178 (43%)
Frame = +1
Query: 184 CMNKDAECQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVK 363
C+ + C C S+ DLY S C H+ LCLKC R A S C EC +T++IR + V+
Sbjct: 4 CLQLNTSCVGCGSQSDLYGSSCRHMT-LCLKCGRTMAQNKSKCHECGTVVTRLIREYNVR 62
Query: 364 RTSQKGWSGFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDGAREIRF 543
+ + F+G + P+ ++ K S + ++ + D RE
Sbjct: 63 AAAPTDKNYFIG-------RFVTGLPNFKKGSENKWSLRKDIPQGRQ---FTDAQRE--- 109
Query: 544 RIKSNKSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIKSW 717
++K+ +P ILED ++G + + Y++ + ++ F P SW
Sbjct: 110 KLKN----KPWILEDETGQFQYQGHLEGSQSATYYLLVMQ------NKEFVAIPAGSW 157
>sp|Q9SU25.1|T2FA_ARATH RecName: Full=Transcription initiation factor IIF subunit alpha;
Short=TFIIF-alpha; AltName: Full=General transcription
factor IIF subunit 1; AltName: Full=Transcription
initiation factor RAP74 homolog; Short=AtRAP74
gi|5823572|emb|CAB53754.1| putative protein [Arabidopsis
thaliana] gi|7267963|emb|CAB78304.1| putative protein
[Arabidopsis thaliana]
Length = 649
Score = 63.2 bits (152), Expect = 8e-08
Identities = 45/178 (25%), Positives = 78/178 (43%)
Frame = +1
Query: 184 CMNKDAECQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVK 363
C+ + C C S+ DLY S C H+ LCLKC R A S C EC +T++IR + V+
Sbjct: 4 CLQLNTSCVGCGSQSDLYGSSCRHMT-LCLKCGRTMAQNKSKCHECGTVVTRLIREYNVR 62
Query: 364 RTSQKGWSGFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDGAREIRF 543
+ + F+G + P+ ++ K S + ++ + D RE
Sbjct: 63 AAAPTDKNYFIG-------RFVTGLPNFKKGSENKWSLRKDIPQGRQ---FTDAQRE--- 109
Query: 544 RIKSNKSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIKSW 717
++K+ +P ILED ++G + + Y++ + ++ F P SW
Sbjct: 110 KLKN----KPWILEDETGQFQYQGHLEGSQSATYYLLVMQ------NKEFVAIPAGSW 157
>gb|ESW19654.1| hypothetical protein PHAVU_006G143600g [Phaseolus vulgaris]
Length = 540
Score = 62.8 bits (151), Expect = 1e-07
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 2/175 (1%)
Frame = +1
Query: 199 AECQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQK 378
+ C C S DLY S C H+ LCL C + A+ + C +C +T++IR + V+ +S
Sbjct: 9 SSCSGCGSTTDLYGSNCKHMT-LCLSCGKTMAENRAKCVDCGVTLTRLIREYNVRASSTN 67
Query: 379 GWSGFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIRFRIK 552
+ F+G + D +++K + + +WA ++G R+I ++
Sbjct: 68 DKNYFIGRFM----------TGLPDFSKKKSA-------ENKWALQKEGLLGRQITDTLR 110
Query: 553 SNKSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIKSW 717
+P +LED ++G + + Y++ E + F P SW
Sbjct: 111 EKYKNKPWLLEDETGQSQYQGHLEGSQSATYYLLMKE------RKEFVAIPAGSW 159
>gb|EMJ12738.1| hypothetical protein PRUPE_ppa003970mg [Prunus persica]
Length = 537
Score = 62.8 bits (151), Expect = 1e-07
Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 6/179 (3%)
Frame = +1
Query: 199 AECQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQK 378
+ C C S +LY S C H+ LCL C + A+ + C +C +T++IR + V+ ++
Sbjct: 9 SSCSGCGSTSELYGSNCKHMT-LCLSCGKTMAENRAKCFDCGAIVTRLIREYNVRASTVN 67
Query: 379 GWSGFVGI----LPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIR 540
+ F+G LP SF + + + +W+ +++G R++
Sbjct: 68 DKNYFIGRFVTGLP---------------------SFSKKKNAENKWSLHKEGLQGRQLS 106
Query: 541 FRIKSNKSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIKSW 717
++ +P +LED ++G + A Y++ + + FS P SW
Sbjct: 107 DTLRDKYKNKPWVLEDETGQSQYQGHLEGAQTATYYLLMRQ------GKEFSAIPAGSW 159
>ref|XP_006586768.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Glycine max]
Length = 536
Score = 62.4 bits (150), Expect = 1e-07
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 2/175 (1%)
Frame = +1
Query: 199 AECQDCHSKKDLYASVCTHIDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQK 378
+ C C S DLY S C H+ LCL C + A + + C +C +T++IR + V+ +S
Sbjct: 9 SSCSGCGSTTDLYGSNCKHM-TLCLGCGKTMAAKRAKCVDCGATLTRLIREYNVRASSPN 67
Query: 379 GWSGFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQKRWACYRDG--AREIRFRIK 552
+ F+G + PD F + + +W+ +DG R+I ++
Sbjct: 68 DKNYFIG-------RFINGLPD----------FSKKKSAENKWSLQKDGLHGRQITDTLR 110
Query: 553 SNKSTRPLILEDLKADRTFKGKCKLANLKRYFMAQFEPEARIFSETFSVYPIKSW 717
+P +LED F+G + + Y++ E + F P SW
Sbjct: 111 EKYKNKPWLLEDETGQSQFQGHLEGSQSATYYLLMKE------RKEFVAIPAGSW 159