BLASTX nr result

ID: Ephedra25_contig00024218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00024218
         (702 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006382417.1| hypothetical protein POPTR_0005s01960g [Popu...    56   1e-05
ref|XP_002330190.1| predicted protein [Populus trichocarpa]            56   1e-05

>ref|XP_006382417.1| hypothetical protein POPTR_0005s01960g [Populus trichocarpa]
           gi|550337777|gb|ERP60214.1| hypothetical protein
           POPTR_0005s01960g [Populus trichocarpa]
          Length = 915

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 8/216 (3%)
 Frame = -1

Query: 645 KREFSKKINKVSDPMRKSVPPQSSGAKAFKGQQLNKSWSGKEASGTLRPNT--ESAFAST 472
           K++     +  S P R S   +SS AK  KGQQ +KSWSG E   + + +T  E    S+
Sbjct: 250 KQKMEAAAHTTSKPQRSS---ESSVAKNTKGQQSDKSWSGPEGLSSSKASTSSEKGTPSS 306

Query: 471 VPAKENSIPAVQQDTDKRKIKPSGLPAKQESLRTQTKLGTSKSTAMKKQQQKTVSLALEA 292
           +  K  S+P   Q       +  G   K +S+  Q +    K+  M K Q +T       
Sbjct: 307 LKNKGKSVPLAAQAKSTNGQRRDGSTLKSKSIVKQKEKNEVKTNQMLKTQPRT------- 359

Query: 291 KANVQKREIEGAL-----QNNIHDVNSANDTNECLERAGEIRKRNKVEEQTDDM-RDRVQ 130
           +  VQKR  E        QNN+   ++ N  +  L+ +   ++  K +  +  + + R  
Sbjct: 360 QNTVQKRISESRTSNVLQQNNLKQNSAPNKDSSGLKNSLSNQQGRKTKSTSGSVGQSRTV 419

Query: 129 LPELKEKKTGPRQGTSGLSKSSKQNTTGFVSKSSRI 22
              + + +T PR+    ++ S K+ T     K   +
Sbjct: 420 KKVVVKPETVPRKMGLVMTDSEKEKTKNIARKKRSV 455


>ref|XP_002330190.1| predicted protein [Populus trichocarpa]
          Length = 647

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 8/216 (3%)
 Frame = -1

Query: 645 KREFSKKINKVSDPMRKSVPPQSSGAKAFKGQQLNKSWSGKEASGTLRPNT--ESAFAST 472
           K++     +  S P R S   +SS AK  KGQQ +KSWSG E   + + +T  E    S+
Sbjct: 246 KQKMEAAAHTTSKPQRSS---ESSVAKNTKGQQSDKSWSGPEGLSSSKASTSSEKGTPSS 302

Query: 471 VPAKENSIPAVQQDTDKRKIKPSGLPAKQESLRTQTKLGTSKSTAMKKQQQKTVSLALEA 292
           +  K  S+P   Q       +  G   K +S+  Q +    K+  M K Q +T       
Sbjct: 303 LKNKGKSVPLAAQAKSTNGQRRDGSTLKSKSIVKQKEKNEVKTNQMLKTQPRT------- 355

Query: 291 KANVQKREIEGAL-----QNNIHDVNSANDTNECLERAGEIRKRNKVEEQTDDM-RDRVQ 130
           +  VQKR  E        QNN+   ++ N  +  L+ +   ++  K +  +  + + R  
Sbjct: 356 QNTVQKRISESRTSNVLQQNNLKQNSAPNKDSSGLKNSLSNQQGRKTKSTSGSVGQSRTV 415

Query: 129 LPELKEKKTGPRQGTSGLSKSSKQNTTGFVSKSSRI 22
              + + +T PR+    ++ S K+ T     K   +
Sbjct: 416 KKVVVKPETVPRKMGLVMTDSEKEKTKNIARKKRSV 451


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