BLASTX nr result

ID: Ephedra25_contig00024197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00024197
         (402 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001781916.1| predicted protein [Physcomitrella patens] gi...    91   1e-16
gb|ABK26131.1| unknown [Picea sitchensis]                              89   6e-16
gb|ABK26175.1| unknown [Picea sitchensis]                              89   6e-16
ref|XP_001763512.1| predicted protein [Physcomitrella patens] gi...    80   2e-13
ref|WP_017747445.1| glycosyhydrolase [Scytonema hofmanni]              57   2e-06
ref|YP_007167016.1| hypothetical protein PCC7418_0574 [Halothece...    55   7e-06

>ref|XP_001781916.1| predicted protein [Physcomitrella patens]
           gi|162666632|gb|EDQ53281.1| predicted protein
           [Physcomitrella patens]
          Length = 450

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 41/67 (61%), Positives = 50/67 (74%)
 Frame = -2

Query: 203 GSGWWDAKCVAGPVVLQEPSSSAYRMYYYGRDSDNWNMGLKAINPNLPTGRIGLALSTDG 24
           G  WWD KCV  PVV++EPSSS +RMYYYGRD DNW+ G++     L TGR+GLALS DG
Sbjct: 105 GEDWWDHKCVFHPVVVREPSSSTWRMYYYGRDGDNWSSGVRP--ALLSTGRVGLALSEDG 162

Query: 23  ISFHRHR 3
           + + RHR
Sbjct: 163 VHWSRHR 169


>gb|ABK26131.1| unknown [Picea sitchensis]
          Length = 397

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 SGWWDAKCVAGPVVLQEPS-SSAYRMYYYGRDSDNWNMGLKAINPNLPTGRIGLALSTDG 24
           S WWD K  +G VV++EP  ++ YRMYYYGR  + WNMG++  N  LPTGRIG+A S+DG
Sbjct: 62  SNWWDRKLFSGAVVVKEPKGATGYRMYYYGRSEEVWNMGVQPFNNTLPTGRIGVAFSSDG 121

Query: 23  ISFHRHR 3
           ++F RHR
Sbjct: 122 LAFQRHR 128


>gb|ABK26175.1| unknown [Picea sitchensis]
          Length = 351

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 SGWWDAKCVAGPVVLQEPS-SSAYRMYYYGRDSDNWNMGLKAINPNLPTGRIGLALSTDG 24
           S WWD K  +G VV++EP  ++ YRMYYYGR  + WNMG++  N  LPTGRIG+A S+DG
Sbjct: 16  SNWWDRKLFSGAVVVKEPKGATGYRMYYYGRSEEVWNMGVQPFNNTLPTGRIGVAFSSDG 75

Query: 23  ISFHRHR 3
           ++F RHR
Sbjct: 76  LAFQRHR 82


>ref|XP_001763512.1| predicted protein [Physcomitrella patens]
           gi|162685305|gb|EDQ71701.1| predicted protein
           [Physcomitrella patens]
          Length = 449

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 34/65 (52%), Positives = 44/65 (67%)
 Frame = -2

Query: 200 SGWWDAKCVAGPVVLQEPSSSAYRMYYYGRDSDNWNMGLKAINPNLPTGRIGLALSTDGI 21
           S WWD K ++G VV+ E   S YRMYYYGR  D W  G++  N +LPTGR G+A+S DG+
Sbjct: 94  SDWWDKKLLSGAVVVPEIGKSGYRMYYYGRGGDEWAKGVQPFNASLPTGRNGMAVSEDGL 153

Query: 20  SFHRH 6
            F R+
Sbjct: 154 QFERY 158


>ref|WP_017747445.1| glycosyhydrolase [Scytonema hofmanni]
          Length = 350

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 45/63 (71%)
 Frame = -2

Query: 197 GWWDAKCVAGPVVLQEPSSSAYRMYYYGRDSDNWNMGLKAINPNLPTGRIGLALSTDGIS 18
           GWWD++ V+ P V++ P  + ++M+YYGRD+ +++  +     NLPTGR GLA+STDG+ 
Sbjct: 20  GWWDSERVSSPQVMRCPDGT-WKMWYYGRDA-SFDRDI-----NLPTGRCGLAISTDGVC 72

Query: 17  FHR 9
           + R
Sbjct: 73  WER 75


>ref|YP_007167016.1| hypothetical protein PCC7418_0574 [Halothece sp. PCC 7418]
           gi|505037578|ref|WP_015224680.1| hypothetical protein
           [Halothece sp. PCC 7418] gi|428689508|gb|AFZ42802.1|
           hypothetical protein PCC7418_0574 [Halothece sp. PCC
           7418]
          Length = 349

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/63 (47%), Positives = 39/63 (61%)
 Frame = -2

Query: 197 GWWDAKCVAGPVVLQEPSSSAYRMYYYGRDSDNWNMGLKAINPNLPTGRIGLALSTDGIS 18
           GWWD++ V+ P VL+  S   +RM+YYGRD +           NLPTGR GLA+S DGI 
Sbjct: 18  GWWDSERVSSPCVLR-CSDGKWRMWYYGRDPEFDR------EINLPTGRCGLAISDDGIH 70

Query: 17  FHR 9
           + R
Sbjct: 71  WER 73


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