BLASTX nr result
ID: Ephedra25_contig00024064
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00024064
(486 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABN06136.1| RNA-directed DNA polymerase (Reverse transcriptas... 76 1e-14
ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614... 76 5e-14
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607... 74 1e-13
gb|ABA97820.2| retrotransposon protein, putative, unclassified [... 74 2e-13
ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608... 77 3e-13
ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626... 74 3e-13
emb|CAN77032.1| hypothetical protein VITISV_015343 [Vitis vinifera] 68 6e-13
emb|CAN80945.1| hypothetical protein VITISV_026851 [Vitis vinifera] 69 2e-12
dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu] 74 2e-12
gb|AAX92831.1| retrotransposon protein, putative, unclassified [... 70 3e-12
emb|CAN66313.1| hypothetical protein VITISV_027165 [Vitis vinifera] 69 3e-12
gb|AAX95830.1| retrotransposon protein, putative, unclassified [... 70 3e-12
emb|CAN78934.1| hypothetical protein VITISV_005911 [Vitis vinifera] 71 3e-12
gb|AAU44286.1| putative polyprotein [Oryza sativa Japonica Group] 69 5e-12
emb|CAN81652.1| hypothetical protein VITISV_003754 [Vitis vinifera] 61 5e-12
emb|CAN64049.1| hypothetical protein VITISV_019943 [Vitis vinifera] 65 6e-12
emb|CAE04033.2| OSJNBb0068N06.9 [Oryza sativa Japonica Group] 69 6e-12
gb|ABD63198.1| gag/pol polyprotein, related [Asparagus officinalis] 69 8e-12
gb|AAX96027.1| retrotransposon protein, putative, unclassified [... 68 1e-11
gb|ABA92716.2| retrotransposon protein, putative, unclassified [... 68 1e-11
>gb|ABN06136.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1146
Score = 76.3 bits (186), Expect(2) = 1e-14
Identities = 38/103 (36%), Positives = 61/103 (59%)
Frame = -2
Query: 410 RTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKVKHTIVNKDGVRPYKQKS 231
R +KI + G K+K+I++++++ ++FA YEDMP +D V+H I K P +QK
Sbjct: 76 REIKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPDCPPVRQKL 135
Query: 230 R*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
R H + E+QK +D GF++ +Y WV+ IV V KK+
Sbjct: 136 RRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKD 178
Score = 28.9 bits (63), Expect(2) = 1e-14
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = -3
Query: 97 IKIYIDFSHLNLSTLKDDFSVPNIDYL 17
+++ +DF LN ++ KD+F +P+ID L
Sbjct: 181 VRMCVDFRDLNKASPKDNFPLPHIDVL 207
>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
Length = 1089
Score = 75.9 bits (185), Expect(2) = 5e-14
Identities = 42/113 (37%), Positives = 59/113 (52%)
Frame = -2
Query: 440 EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKVKHTIVNK 261
EV + R +K+ + K +L+K +Q H +VFA +EDMP ID H + K
Sbjct: 628 EVVISRSDPSRVVKVGSELGEAIKAELVKCLQSHADVFAWSHEDMPGIDRGIACHKLAVK 687
Query: 260 DGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
G RP +QK R + E N E++KLL GFI Y W+S +V+V K N
Sbjct: 688 RGARPVRQKRRCFNHERYEAINAEVEKLLKAGFIREAKYPEWISNVVLVKKAN 740
Score = 26.9 bits (58), Expect(2) = 5e-14
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 94 KIYIDFSHLNLSTLKDDFSVPNIDYL 17
++ +DF+ LN + KD F +P ID L
Sbjct: 744 RMCVDFTDLNKACPKDSFPLPKIDQL 769
>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
Length = 1866
Score = 74.3 bits (181), Expect(2) = 1e-13
Identities = 41/113 (36%), Positives = 59/113 (52%)
Frame = -2
Query: 440 EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKVKHTIVNK 261
EV V + +K+ + K +L+K +Q H ++FA +EDMP ID H + K
Sbjct: 795 EVVVSRSDPSKVVKVGSELGEAIKGELVKCLQSHADIFAWSHEDMPGIDRGIACHKLAVK 854
Query: 260 DGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
G RP +QK R + E N E++KLL GFI Y W+S +V+V K N
Sbjct: 855 RGARPVRQKRRCFNHERYEAINAEVEKLLKAGFIREAKYPEWISNVVLVKKAN 907
Score = 26.9 bits (58), Expect(2) = 1e-13
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 94 KIYIDFSHLNLSTLKDDFSVPNIDYL 17
++ +DF+ LN + KD F +P ID L
Sbjct: 911 RMCVDFTDLNKACPKDSFPLPKIDQL 936
>gb|ABA97820.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1710
Score = 73.6 bits (179), Expect(2) = 2e-13
Identities = 43/121 (35%), Positives = 66/121 (54%)
Frame = -2
Query: 461 MTMDDI*EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKV 282
M+ DD+ E+++ R I G + KLI++++++ + FA Y +MPR+ S V
Sbjct: 875 MSADDLEEIDIGPGDRPRPTFISKNLSSGFRTKLIELLKEYRDFFAWEYHEMPRLSRSIV 934
Query: 281 KHTIVNKDGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
+H + K GVRPY+Q R + E+ +L D GFI Y+ W+S IV V KKN
Sbjct: 935 EHRLPIKLGVRPYQQPPRRCKADMLVAVKAEVARLYDAGFIRPCRYAEWISNIVPVIKKN 994
Query: 101 D 99
D
Sbjct: 995 D 995
Score = 27.3 bits (59), Expect(2) = 2e-13
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 97 IKIYIDFSHLNLSTLKDDFSVPNIDYL 17
+++ IDF LN +T KD++ +P D L
Sbjct: 997 VRVCIDFRDLNKATPKDEYPMPVADQL 1023
>ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608416 [Citrus sinensis]
Length = 1313
Score = 76.6 bits (187), Expect(2) = 3e-13
Identities = 43/113 (38%), Positives = 60/113 (53%)
Frame = -2
Query: 440 EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKVKHTIVNK 261
EV V R +K+ + K +L+K +Q H ++FA +EDMP ID H + K
Sbjct: 640 EVVVSRSDPSRVVKVGSELGREIKTELVKCLQSHADIFAWSHEDMPGIDRRIACHKLAVK 699
Query: 260 DGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
G RP +QK R + ET N E++KLL GFI Y W+S +V+V K N
Sbjct: 700 KGARPVRQKRRCFNHKRYETINAEVEKLLKAGFIREAKYPEWISNVVLVKKAN 752
Score = 23.9 bits (50), Expect(2) = 3e-13
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 94 KIYIDFSHLNLSTLKDDFSVPNIDYL 17
++ +DF+ LN + KD F + ID L
Sbjct: 756 RMCVDFTDLNKACPKDSFPLQKIDQL 781
>ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626228 [Citrus sinensis]
Length = 1189
Score = 73.6 bits (179), Expect(2) = 3e-13
Identities = 41/118 (34%), Positives = 65/118 (55%)
Frame = -2
Query: 455 MDDI*EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKVKH 276
++D+ V + + +T++I + + K++L+K +Q H +VFA +EDMP ID H
Sbjct: 725 VEDLETVSLGPENPGKTIRIGSRLEGEQKQELVKCLQAHADVFAWTHEDMPGIDPEVACH 784
Query: 275 TIVNKDGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
+ K G R +QK R + E N E++KLL GFI Y W+S +V+V K N
Sbjct: 785 RLAIKKGARAVRQKRRCFNQERYEAINGEVEKLLRAGFIREVSYPEWISNVVLVKKAN 842
Score = 26.9 bits (58), Expect(2) = 3e-13
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 94 KIYIDFSHLNLSTLKDDFSVPNIDYL 17
++ +DF+ LN + KD F +P ID L
Sbjct: 846 RMCVDFTDLNKACPKDSFPLPKIDQL 871
>emb|CAN77032.1| hypothetical protein VITISV_015343 [Vitis vinifera]
Length = 2281
Score = 67.8 bits (164), Expect(2) = 6e-13
Identities = 40/116 (34%), Positives = 62/116 (53%)
Frame = -2
Query: 449 DI*EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKVKHTI 270
DI V+ + R L+I ++ LI++++ +++VFA YEDMP +D S V+H +
Sbjct: 1230 DIEIVDFGTTDQPRELRIGSDLSTDERDSLIQLLRSYLDVFAWSYEDMPGLDPSIVQHRL 1289
Query: 269 VNKDGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
RP+KQK R H EIQK L GF+ +Y W++ +V V KK+
Sbjct: 1290 PLLPHARPFKQKLRRLHPRWSMQVKKEIQKQLSVGFLSVVEYREWLANVVPVPKKD 1345
Score = 31.6 bits (70), Expect(2) = 6e-13
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -3
Query: 97 IKIYIDFSHLNLSTLKDDFSVPNIDYL 17
+++ +DF LN ++ KDDF +P+ID L
Sbjct: 1348 VRVCVDFRDLNKASPKDDFPLPHIDML 1374
>emb|CAN80945.1| hypothetical protein VITISV_026851 [Vitis vinifera]
Length = 1112
Score = 68.6 bits (166), Expect(2) = 2e-12
Identities = 40/117 (34%), Positives = 63/117 (53%)
Frame = -2
Query: 452 DDI*EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKVKHT 273
+D+ V+ + + R LKI +++LI +++ +++VFA YEDMP +D S V+H
Sbjct: 55 EDVETVDFGTEDQPRELKIGSPLSTDERDRLIHLLRSYLDVFAWSYEDMPGLDPSIVQHH 114
Query: 272 IVNKDGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
+ RP KQK R H EI+K L GFI +Y W++ +V V KK+
Sbjct: 115 LPTLPHARPVKQKLRRLHPRWSLQVKEEIKKQLSVGFISVVEYPEWLANVVPVPKKD 171
Score = 29.3 bits (64), Expect(2) = 2e-12
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 97 IKIYIDFSHLNLSTLKDDFSVPNIDYL 17
+++ +DF N ++ KDDF P+ID L
Sbjct: 174 VRVCVDFRDFNKASPKDDFPFPHIDLL 200
>dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
Length = 1542
Score = 73.6 bits (179), Expect(2) = 2e-12
Identities = 40/111 (36%), Positives = 61/111 (54%)
Frame = -2
Query: 440 EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKVKHTIVNK 261
EV V+ R +KI K +L+K +Q + ++FA +EDMPRID+ H + +
Sbjct: 718 EVFVNKSNPSRMVKIGSGLGETIKGELVKYLQSYADIFAWSHEDMPRIDHGIAYHKLAIR 777
Query: 260 DGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSK 108
G P +QK R + E N E+++LL GFI T YS W+S +++V K
Sbjct: 778 KGAMPVRQKRRCFNQERYEAINAEVEQLLKAGFIRKTKYSEWISNVILVKK 828
Score = 23.9 bits (50), Expect(2) = 2e-12
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 94 KIYIDFSHLNLSTLKDDFSVPNIDYL 17
++ +DF+ LN + KD F + ID L
Sbjct: 831 RMCVDFTDLNKACPKDSFPLQKIDQL 856
>gb|AAX92831.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1497
Score = 69.7 bits (169), Expect(2) = 3e-12
Identities = 43/120 (35%), Positives = 66/120 (55%)
Frame = -2
Query: 461 MTMDDI*EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKV 282
M+ D++ E+++ R I I+ + KLI++++D + FA Y +MP + S V
Sbjct: 711 MSADELEEIDIGPGDRPRPTYISIKLSPEFRTKLIELLKDFRDCFAWEYYEMPGLSRSIV 770
Query: 281 KHTIVNKDGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
+H + K GVRP +Q R + E EI++L D GFI Y+ WVS IV+V KKN
Sbjct: 771 EHRLPIKPGVRPRQQPPRRCKADMLEPVKAEIKRLYDAGFIHPCRYAEWVSSIVLVIKKN 830
Score = 27.3 bits (59), Expect(2) = 3e-12
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 97 IKIYIDFSHLNLSTLKDDFSVPNIDYL 17
+++ IDF LN +T KD++ +P D L
Sbjct: 833 VRVCIDFRDLNKATPKDEYPMPVADQL 859
>emb|CAN66313.1| hypothetical protein VITISV_027165 [Vitis vinifera]
Length = 1307
Score = 68.6 bits (166), Expect(2) = 3e-12
Identities = 38/104 (36%), Positives = 58/104 (55%)
Frame = -2
Query: 410 RTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKVKHTIVNKDGVRPYKQKS 231
R L+I + ++ LI+++ +++VFA YEDMP +D S ++H + RP KQK
Sbjct: 83 RELRIGSDLSIDERDSLIQLLGAYLDVFAWSYEDMPGLDPSIIQHRLPLLPHARPIKQKL 142
Query: 230 R*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKND 99
R H EIQK L GF+ +YS W++ +V V KK+D
Sbjct: 143 RRLHPRWSLQVKEEIQKQLSVGFLSVVEYSEWLANVVPVPKKDD 186
Score = 28.5 bits (62), Expect(2) = 3e-12
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 97 IKIYIDFSHLNLSTLKDDFSVPNIDYL 17
+++ +DF L ++ KDDF P+ID L
Sbjct: 188 VRVCVDFRDLKKASPKDDFPFPHIDML 214
>gb|AAX95830.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|108864305|gb|ABG22462.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 971
Score = 69.7 bits (169), Expect(2) = 3e-12
Identities = 43/120 (35%), Positives = 66/120 (55%)
Frame = -2
Query: 461 MTMDDI*EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKV 282
M+ D++ E+++ R I I+ + KLI++++D + FA Y +MP + S V
Sbjct: 185 MSADELEEIDIGPGDRPRPTYISIKLSPEFRTKLIELLKDFRDCFAWEYYEMPGLSRSIV 244
Query: 281 KHTIVNKDGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
+H + K GVRP +Q R + E EI++L D GFI Y+ WVS IV+V KKN
Sbjct: 245 EHRLPIKPGVRPRQQPPRRCKADMLEPVKAEIKRLYDAGFIHPCRYAEWVSSIVLVIKKN 304
Score = 27.3 bits (59), Expect(2) = 3e-12
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 97 IKIYIDFSHLNLSTLKDDFSVPNIDYL 17
+++ IDF LN +T KD++ +P D L
Sbjct: 307 VRVCIDFRDLNKATPKDEYPMPVADQL 333
>emb|CAN78934.1| hypothetical protein VITISV_005911 [Vitis vinifera]
Length = 630
Score = 71.2 bits (173), Expect(2) = 3e-12
Identities = 41/119 (34%), Positives = 65/119 (54%)
Frame = -2
Query: 458 TMDDI*EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKVK 279
T D+ V+ + + R LKI +++LI +++ +++VFA YEDMP ++ S V+
Sbjct: 123 TTGDVETVDFGIEDQPRELKIGSPLSTDERDRLIHLLKSYLDVFAWSYEDMPGLNRSIVQ 182
Query: 278 HTIVNKDGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
H + VRP KQK R H EI K L GFI +Y W++ +V++SKK+
Sbjct: 183 HRLPILPHVRPVKQKLRRLHSRWSLQVKEEIWKQLSVGFISVVEYLEWLANVVIISKKD 241
Score = 25.8 bits (55), Expect(2) = 3e-12
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 97 IKIYIDFSHLNLSTLKDDFSVPNID 23
+++ +DF LN KDDF +P+ID
Sbjct: 244 VRVCVDFRDLNT---KDDFPLPHID 265
>gb|AAU44286.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1316
Score = 68.6 bits (166), Expect(2) = 5e-12
Identities = 41/120 (34%), Positives = 64/120 (53%)
Frame = -2
Query: 461 MTMDDI*EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKV 282
M+ DD+ E+++ R I + KLI++++++ + FA Y +MP + S V
Sbjct: 829 MSADDLEEIDIGPGDRPRPTFISNNLSPEFRTKLIELLKEYRDCFASEYYEMPGLSRSIV 888
Query: 281 KHTIVNKDGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
+H + K GVRPY+Q R + + E+ +L D GFI Y+ WVS IV V KKN
Sbjct: 889 EHRLPIKPGVRPYQQPPRRCKADMLDAVKAEVARLYDAGFICPCRYAEWVSNIVPVIKKN 948
Score = 27.7 bits (60), Expect(2) = 5e-12
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 97 IKIYIDFSHLNLSTLKDDFSVPNIDYL 17
+++ IDF LN +T KD++ +P D L
Sbjct: 951 VRVCIDFRDLNKATQKDEYPMPIADQL 977
>emb|CAN81652.1| hypothetical protein VITISV_003754 [Vitis vinifera]
Length = 954
Score = 61.2 bits (147), Expect(2) = 5e-12
Identities = 36/100 (36%), Positives = 54/100 (54%)
Frame = -2
Query: 383 DVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKVKHTIVNKDGVRPYKQKSR*PHLSLEE 204
D ++ L +++ +++VFA YEDM +D S V+H + VRP KQK R H
Sbjct: 305 DFDERDGLAQLLISYLDVFAWSYEDMSGLDPSIVQHRLPLLPHVRPVKQKLRRLHPRWSL 364
Query: 203 TDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKNDYQNLY 84
N EIQK L G + +Y W++ +V V KK+D +Y
Sbjct: 365 QVNEEIQKQLSVGCLSVVEYPEWLANVVPVPKKDDKVRVY 404
Score = 35.0 bits (79), Expect(2) = 5e-12
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = -3
Query: 97 IKIYIDFSHLNLSTLKDDFSVPNIDYL 17
+++Y+DF LN ++ KDDF +P+ID L
Sbjct: 401 VRVYVDFRDLNKASPKDDFPLPHIDML 427
>emb|CAN64049.1| hypothetical protein VITISV_019943 [Vitis vinifera]
Length = 1499
Score = 64.7 bits (156), Expect(2) = 6e-12
Identities = 39/119 (32%), Positives = 60/119 (50%)
Frame = -2
Query: 458 TMDDI*EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKVK 279
T D+ V+ + ++R LKI +E+LI +++ +++VFA YE +P +D S V+
Sbjct: 611 TAGDVEAVDFGTENQLRELKIGSPISTNERERLIHLLRSYLDVFAWSYEYIPGLDPSIVQ 670
Query: 278 HTIVNKDGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
H RP KQK R H EIQK GFI +Y W++ IV + K +
Sbjct: 671 HHFPTLPHARPVKQKLRQLHPRWSLQVKEEIQKQFSVGFISVVEYPEWLANIVPIPKND 729
Score = 31.2 bits (69), Expect(2) = 6e-12
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 97 IKIYIDFSHLNLSTLKDDFSVPNIDYL 17
+++ +DF LN ++ KDDF P+ID L
Sbjct: 732 VRVCVDFKDLNKASPKDDFPFPHIDLL 758
>emb|CAE04033.2| OSJNBb0068N06.9 [Oryza sativa Japonica Group]
Length = 1448
Score = 68.6 bits (166), Expect(2) = 6e-12
Identities = 42/120 (35%), Positives = 65/120 (54%)
Frame = -2
Query: 461 MTMDDI*EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKV 282
M+ DD+ E+++ R I + + KLI+++++ + FA Y +MP + S V
Sbjct: 834 MSADDLEEIDIGPGDRPRPTFISKNLSLEFRTKLIELLKEFRDCFAWEYYEMPGLSQSIV 893
Query: 281 KHTIVNKDGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
+H + K GVRP++Q R ++ E EI+ L D GFI Y+ WVS IV V KKN
Sbjct: 894 EHRLPIKPGVRPHQQPPRRCKANMLEPIKAEIKSLYDAGFIRPCQYAEWVSSIVPVIKKN 953
Score = 27.3 bits (59), Expect(2) = 6e-12
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 97 IKIYIDFSHLNLSTLKDDFSVPNIDYL 17
+++ IDF LN +T KD++ +P D L
Sbjct: 956 VRVCIDFRDLNKATPKDEYPMPVADQL 982
>gb|ABD63198.1| gag/pol polyprotein, related [Asparagus officinalis]
Length = 313
Score = 68.9 bits (167), Expect(2) = 8e-12
Identities = 40/120 (33%), Positives = 63/120 (52%)
Frame = -2
Query: 458 TMDDI*EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKVK 279
T D I ++ + + ++ + I KE LI +I+++++VFAL YEDMP +D
Sbjct: 113 TKDKILQINMGNEANLKPIFISDSLPSWEKENLISLIREYIDVFALNYEDMPGLDPRIAM 172
Query: 278 HTIVNKDGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKND 99
+ +P KQ+ R H + E E++KL+ GFI + WV+ IV V KKND
Sbjct: 173 QRLNISPDAKPVKQQQRRFHPQIMEAIESEVKKLIKSGFIREEQHPDWVANIVSVLKKND 232
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 97 IKIYIDFSHLNLSTLKDDFSVPNIDYL 17
I+I IDF LN + KD+F +P D +
Sbjct: 234 IRICIDFRDLNTACPKDEFPLPITDVI 260
>gb|AAX96027.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1625
Score = 67.8 bits (164), Expect(2) = 1e-11
Identities = 41/120 (34%), Positives = 64/120 (53%)
Frame = -2
Query: 461 MTMDDI*EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKV 282
M+ DD+ E+++ +R I + KLI++++++ + FA Y +MP + S V
Sbjct: 736 MSADDLEEIDIGPGDRLRPTFISKNLSPEFRTKLIELLKEYRDCFAWEYYEMPGLSRSIV 795
Query: 281 KHTIVNKDGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
+H + K GVRPY+Q R + E E+++L D FI Y WVS IV V KKN
Sbjct: 796 EHRLPIKWGVRPYQQSPRRCKADMLEAVKSEVKRLYDASFIRPCRYPEWVSNIVPVIKKN 855
Score = 27.3 bits (59), Expect(2) = 1e-11
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 97 IKIYIDFSHLNLSTLKDDFSVPNIDYL 17
+++ IDF LN +T KD++ +P D L
Sbjct: 858 VRVCIDFRDLNKATPKDEYPMPVADQL 884
>gb|ABA92716.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1591
Score = 67.8 bits (164), Expect(2) = 1e-11
Identities = 41/120 (34%), Positives = 64/120 (53%)
Frame = -2
Query: 461 MTMDDI*EVEVHFKGEIRTLKIDIQKDVGTKEKLIKVIQDHVEVFALFYEDMPRIDYSKV 282
M+ DD+ E+++ +R I + KLI++++++ + FA Y +MP + S V
Sbjct: 702 MSADDLEEIDIGPGDRLRPTFISKNLSPEFRTKLIELLKEYRDCFAWEYYEMPGLSRSIV 761
Query: 281 KHTIVNKDGVRPYKQKSR*PHLSLEETDN*EIQKLLDRGFIIATDYSYWVSQIVVVSKKN 102
+H + K GVRPY+Q R + E E+++L D FI Y WVS IV V KKN
Sbjct: 762 EHRLPIKWGVRPYQQSPRRCKADMLEAVKSEVKRLYDASFIRPCRYPEWVSNIVPVIKKN 821
Score = 27.3 bits (59), Expect(2) = 1e-11
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 97 IKIYIDFSHLNLSTLKDDFSVPNIDYL 17
+++ IDF LN +T KD++ +P D L
Sbjct: 824 VRVCIDFRDLNKATPKDEYPMPVADQL 850