BLASTX nr result
ID: Ephedra25_contig00024051
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00024051
(550 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE76094.1| unknown [Picea sitchensis] 104 2e-20
gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum] 100 4e-19
gb|EOY05157.1| Glycine-rich RNA-binding protein 4 isoform 2 [The... 98 1e-18
gb|EOY05156.1| Glycine-rich RNA-binding protein 4 isoform 1 [The... 98 1e-18
ref|XP_006645227.1| PREDICTED: glycine-rich RNA-binding protein ... 98 2e-18
gb|EMJ28760.1| hypothetical protein PRUPE_ppa013208mg [Prunus pe... 98 2e-18
ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein ... 98 2e-18
gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bamb... 98 2e-18
ref|XP_004232167.1| PREDICTED: uncharacterized protein LOC101261... 97 2e-18
ref|NP_001275314.1| RNA-binding protein precursor [Solanum tuber... 97 2e-18
gb|EPS69823.1| hypothetical protein M569_04943 [Genlisea aurea] 97 3e-18
ref|XP_006338370.1| PREDICTED: glycine-rich RNA-binding protein ... 96 6e-18
gb|EXB54608.1| Cold-inducible RNA-binding protein [Morus notabilis] 96 8e-18
ref|XP_004971051.1| PREDICTED: glycine-rich RNA-binding protein ... 96 8e-18
ref|XP_004297041.1| PREDICTED: glycine-rich RNA-binding protein ... 96 8e-18
gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sa... 96 8e-18
ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycin... 96 8e-18
ref|XP_006365467.1| PREDICTED: glycine-rich RNA-binding protein ... 95 1e-17
gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberos... 95 1e-17
gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica] 95 1e-17
>gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 104 bits (259), Expect = 2e-20
Identities = 54/94 (57%), Positives = 69/94 (73%), Gaps = 2/94 (2%)
Frame = +1
Query: 52 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNFANGEDADNAA 231
+ +L++GGLS+ TNE+VL+ AFS YG+IL V V++NR +G SKGFGFV FA+ DA NA
Sbjct: 34 NKKLFVGGLSFDTNEKVLRDAFSLYGEILEVRVIINRASGLSKGFGFVQFASETDAVNAL 93
Query: 232 QEMDGQCLDGRNIQVDVARPTRFVDY--PKAVGP 327
+EMDGQ LDGRNI+V+ A D PKAV P
Sbjct: 94 KEMDGQSLDGRNIRVNFANTRARQDSAPPKAVVP 127
>gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 99.8 bits (247), Expect = 4e-19
Identities = 48/93 (51%), Positives = 67/93 (72%)
Frame = +1
Query: 19 SSTFLQQRRRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVN 198
+S F R SS+L++GGLSYGT+E LK+AFS YGD++ V+++R TGRS+GFGF++
Sbjct: 28 ASLFQAIRSMSSSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFIS 87
Query: 199 FANGEDADNAAQEMDGQCLDGRNIQVDVARPTR 297
F + E+A +A Q MDGQ L GR I+V+ A R
Sbjct: 88 FPSSEEAASALQAMDGQDLHGRRIRVNYATEKR 120
>gb|EOY05157.1| Glycine-rich RNA-binding protein 4 isoform 2 [Theobroma cacao]
Length = 156
Score = 98.2 bits (243), Expect = 1e-18
Identities = 43/78 (55%), Positives = 61/78 (78%)
Frame = +1
Query: 52 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNFANGEDADNAA 231
+ +L+IGGLSYGT+++ LK+AFS +GD+ ++++R TGRS+GFGFVNFA+ + A NA
Sbjct: 50 TKKLFIGGLSYGTDDQTLKEAFSGFGDVTEARIIIDRDTGRSRGFGFVNFADDQSASNAL 109
Query: 232 QEMDGQCLDGRNIQVDVA 285
MDGQ L+GRNI+V A
Sbjct: 110 SAMDGQELNGRNIRVSYA 127
>gb|EOY05156.1| Glycine-rich RNA-binding protein 4 isoform 1 [Theobroma cacao]
Length = 139
Score = 98.2 bits (243), Expect = 1e-18
Identities = 43/78 (55%), Positives = 61/78 (78%)
Frame = +1
Query: 52 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNFANGEDADNAA 231
+ +L+IGGLSYGT+++ LK+AFS +GD+ ++++R TGRS+GFGFVNFA+ + A NA
Sbjct: 33 TKKLFIGGLSYGTDDQTLKEAFSGFGDVTEARIIIDRDTGRSRGFGFVNFADDQSASNAL 92
Query: 232 QEMDGQCLDGRNIQVDVA 285
MDGQ L+GRNI+V A
Sbjct: 93 SAMDGQELNGRNIRVSYA 110
>ref|XP_006645227.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Oryza brachyantha]
Length = 143
Score = 97.8 bits (242), Expect = 2e-18
Identities = 43/89 (48%), Positives = 66/89 (74%)
Frame = +1
Query: 19 SSTFLQQRRRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVN 198
S R S++L++GGLS+GTN++ L+ AF+++GD+ V+ +R+TGRS+GFGFVN
Sbjct: 20 SPAMFNAARLMSTKLFVGGLSWGTNDDSLRDAFTSFGDVTEARVITDRETGRSRGFGFVN 79
Query: 199 FANGEDADNAAQEMDGQCLDGRNIQVDVA 285
F NG++A +A + MDG+ L GRNI+V+ A
Sbjct: 80 FVNGDEAKSAMEAMDGKELGGRNIRVNFA 108
>gb|EMJ28760.1| hypothetical protein PRUPE_ppa013208mg [Prunus persica]
Length = 135
Score = 97.8 bits (242), Expect = 2e-18
Identities = 46/88 (52%), Positives = 66/88 (75%)
Frame = +1
Query: 22 STFLQQRRRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNF 201
++ L R SS+L+IGGLS+GT++E LK+AFS++GD+ V+++R TG+S+GFGFV+F
Sbjct: 24 ASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDF 83
Query: 202 ANGEDADNAAQEMDGQCLDGRNIQVDVA 285
A+ E A +A MDGQ L GRNI+V A
Sbjct: 84 ASDESASSALNAMDGQELHGRNIRVSTA 111
>ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 97.8 bits (242), Expect = 2e-18
Identities = 44/81 (54%), Positives = 64/81 (79%)
Frame = +1
Query: 43 RRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNFANGEDAD 222
R S++L++GGLS+GTN+ LK+AFS++G++ V+ +R+TGRS+GFGFV F+N EDA
Sbjct: 33 RFMSNKLFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAK 92
Query: 223 NAAQEMDGQCLDGRNIQVDVA 285
AA MDGQ LDGR+++V+ A
Sbjct: 93 KAASSMDGQELDGRSVRVNFA 113
>gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 97.8 bits (242), Expect = 2e-18
Identities = 42/81 (51%), Positives = 65/81 (80%)
Frame = +1
Query: 43 RRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNFANGEDAD 222
R S++L++GGLS+GT+++ LK AF+++G+++ V+ +R TG+S+GFGFV+F+NG+DA
Sbjct: 33 RLMSTKLFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAK 92
Query: 223 NAAQEMDGQCLDGRNIQVDVA 285
NA MDGQ L+GRNI V+ A
Sbjct: 93 NAMSSMDGQELEGRNIHVNFA 113
>ref|XP_004232167.1| PREDICTED: uncharacterized protein LOC101261381 [Solanum
lycopersicum]
Length = 333
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/92 (50%), Positives = 66/92 (71%)
Frame = +1
Query: 22 STFLQQRRRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNF 201
S F R SS+L++GGLSYGT+E LK+ FS YG+++ V+++R+TGRS+GFGF++F
Sbjct: 29 SLFQTIRSMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISF 88
Query: 202 ANGEDADNAAQEMDGQCLDGRNIQVDVARPTR 297
+ E+A +A Q MDGQ L GR I+V+ A R
Sbjct: 89 PSSEEATSAMQAMDGQDLHGRRIKVNYATEKR 120
>ref|NP_001275314.1| RNA-binding protein precursor [Solanum tuberosum]
gi|15822705|gb|AAL07519.1| RNA-binding protein precursor
[Solanum tuberosum]
Length = 339
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/92 (50%), Positives = 66/92 (71%)
Frame = +1
Query: 22 STFLQQRRRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNF 201
S F R SS+L++GGLSYGT+E LK+ FS YG+++ V+++R+TGRS+GFGF++F
Sbjct: 29 SLFQTIRSMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISF 88
Query: 202 ANGEDADNAAQEMDGQCLDGRNIQVDVARPTR 297
+ E+A +A Q MDGQ L GR I+V+ A R
Sbjct: 89 PSSEEATSAMQAMDGQDLHGRRIKVNYATEKR 120
>gb|EPS69823.1| hypothetical protein M569_04943 [Genlisea aurea]
Length = 127
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/88 (50%), Positives = 63/88 (71%)
Frame = +1
Query: 22 STFLQQRRRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNF 201
S R S++L+IGGLSYGT+++ L+ AFS++GD+ V+ +R +GRS+GFGFVNF
Sbjct: 20 SLMFMTARSMSTKLFIGGLSYGTDDQTLRDAFSSFGDVTDARVITDRDSGRSRGFGFVNF 79
Query: 202 ANGEDADNAAQEMDGQCLDGRNIQVDVA 285
++ E A +A MDGQ L+GRNI+V A
Sbjct: 80 SSDESASSALSAMDGQQLNGRNIRVSYA 107
>ref|XP_006338370.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial
[Solanum tuberosum]
Length = 303
Score = 95.9 bits (237), Expect = 6e-18
Identities = 43/82 (52%), Positives = 63/82 (76%)
Frame = +1
Query: 52 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNFANGEDADNAA 231
SS+L++GGLSYGT+E LK+ FS YG+++ V+++R+TGRS+GFGF++F + E+A +A
Sbjct: 3 SSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAM 62
Query: 232 QEMDGQCLDGRNIQVDVARPTR 297
Q MDGQ L GR I+V+ A R
Sbjct: 63 QAMDGQDLHGRRIKVNYATEKR 84
>gb|EXB54608.1| Cold-inducible RNA-binding protein [Morus notabilis]
Length = 134
Score = 95.5 bits (236), Expect = 8e-18
Identities = 50/102 (49%), Positives = 72/102 (70%), Gaps = 2/102 (1%)
Frame = +1
Query: 31 LQQRRRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNFANG 210
L RR +S+L++GGLS+ TNE L +AFS YG ++ ++V+N+ + +SKGFGFV FA+
Sbjct: 27 LISRRGIASKLFVGGLSFSTNETALTEAFSQYGQVVEAKIVMNKVSDKSKGFGFVTFASV 86
Query: 211 EDADNAAQEMDGQCLDGRNIQVDVARP-TRFVD-YPKAVGPP 330
++A NA EM+G+ L+GR I VD A+P T F + P A GPP
Sbjct: 87 DEAHNALTEMNGKALNGRVIFVDYAKPKTDFSEAVPIARGPP 128
>ref|XP_004971051.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Setaria italica]
Length = 168
Score = 95.5 bits (236), Expect = 8e-18
Identities = 39/81 (48%), Positives = 64/81 (79%)
Frame = +1
Query: 43 RRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNFANGEDAD 222
R S++L++GGLS+GT+++ L++AFS +G++ ++ +R+TGRS+GFGFVNF+N ++A
Sbjct: 33 RLMSTKLFVGGLSWGTDDQTLRQAFSTFGEVTEARIITDRETGRSRGFGFVNFSNSDEAK 92
Query: 223 NAAQEMDGQCLDGRNIQVDVA 285
A MDGQ LDGR+++V+ A
Sbjct: 93 EAVSSMDGQELDGRSVRVNFA 113
>ref|XP_004297041.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 143
Score = 95.5 bits (236), Expect = 8e-18
Identities = 45/88 (51%), Positives = 66/88 (75%)
Frame = +1
Query: 22 STFLQQRRRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNF 201
++ L R SS+L+IGGLS+ T++ LK+AFS +GD+ +V+++R TGRS+GFGFVNF
Sbjct: 24 ASMLNSARYMSSKLFIGGLSFSTDDTSLKEAFSGFGDVTDAKVIMDRDTGRSRGFGFVNF 83
Query: 202 ANGEDADNAAQEMDGQCLDGRNIQVDVA 285
+ E A++A MDGQ L+GR+I+V VA
Sbjct: 84 VDEEAANSALTAMDGQDLNGRSIRVSVA 111
>gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding
protein [Pisum sativum]
Length = 146
Score = 95.5 bits (236), Expect = 8e-18
Identities = 46/89 (51%), Positives = 63/89 (70%)
Frame = +1
Query: 19 SSTFLQQRRRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVN 198
SS R SS+L+IGGLSYG +++ LK AF++YG+++ V+ +R TGRS+GFGFVN
Sbjct: 24 SSMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGRSRGFGFVN 83
Query: 199 FANGEDADNAAQEMDGQCLDGRNIQVDVA 285
F + E A +A MDGQ L+GRNI+V A
Sbjct: 84 FTSDESATSALSAMDGQDLNGRNIRVSYA 112
>ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 95.5 bits (236), Expect = 8e-18
Identities = 43/78 (55%), Positives = 61/78 (78%)
Frame = +1
Query: 52 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNFANGEDADNAA 231
SS+L+IGGLSYG +++ LK AFS +GD++ +V+ +R +GRS+GFGFVNF+N E A +A
Sbjct: 35 SSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSAL 94
Query: 232 QEMDGQCLDGRNIQVDVA 285
MDG+ LDGR+I+V A
Sbjct: 95 SAMDGKDLDGRSIRVSYA 112
>ref|XP_006365467.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Solanum tuberosum]
Length = 145
Score = 95.1 bits (235), Expect = 1e-17
Identities = 42/82 (51%), Positives = 67/82 (81%)
Frame = +1
Query: 43 RRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNFANGEDAD 222
R SSRL++GGLS+GT+++ LK+AF+++GD++ +V+++R +GRS+GFGFVNF++ + A
Sbjct: 35 RCMSSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAK 94
Query: 223 NAAQEMDGQCLDGRNIQVDVAR 288
A MDGQ L GRNI+V++A+
Sbjct: 95 EAMNAMDGQQLHGRNIRVNLAQ 116
>gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like
protein [Solanum tuberosum]
Length = 150
Score = 95.1 bits (235), Expect = 1e-17
Identities = 42/82 (51%), Positives = 67/82 (81%)
Frame = +1
Query: 43 RRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNFANGEDAD 222
R SSRL++GGLS+GT+++ LK+AF+++GD++ +V+++R +GRS+GFGFVNF++ + A
Sbjct: 35 RCMSSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAK 94
Query: 223 NAAQEMDGQCLDGRNIQVDVAR 288
A MDGQ L GRNI+V++A+
Sbjct: 95 EAMNAMDGQQLHGRNIRVNLAQ 116
>gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 95.1 bits (235), Expect = 1e-17
Identities = 42/88 (47%), Positives = 67/88 (76%)
Frame = +1
Query: 25 TFLQQRRRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVNFA 204
+ L R S++L++GGLS+GT+++ L+ AF+ +GD++ V+V+R +GRS+GFGFVNF+
Sbjct: 28 SMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFS 87
Query: 205 NGEDADNAAQEMDGQCLDGRNIQVDVAR 288
+ E A+ A + MDGQ L GRNI+V +A+
Sbjct: 88 DDESANEAIKAMDGQELQGRNIRVSIAQ 115