BLASTX nr result

ID: Ephedra25_contig00024039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00024039
         (460 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006369185.1| hypothetical protein POPTR_0001s18360g [Popu...    57   2e-06
ref|XP_004506842.1| PREDICTED: uncharacterized protein LOC101514...    56   4e-06

>ref|XP_006369185.1| hypothetical protein POPTR_0001s18360g [Populus trichocarpa]
           gi|550347605|gb|ERP65754.1| hypothetical protein
           POPTR_0001s18360g [Populus trichocarpa]
          Length = 1144

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 50/145 (34%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
 Frame = -1

Query: 406 GNNDCAKATNTNKLEYLTIPTKSVTSTHEKSELTSGTFKNEVLKTSSGTSLQHT------ 245
           G N   K  + N     +  +KS TS + KS  TS + K++V K  +  SL H       
Sbjct: 428 GENQSIKHASQN-----SSASKSNTSDYSKS--TSNSKKDDVTKLDA--SLAHNDQSVGT 478

Query: 244 --SSKANDTSKTNGVVSNPNTAVQFRHDNRGSEAVSLQKMDSFED-SMSSYTSEDDENNS 74
             S+  N     N  +SNP+     R   +     SL  +D  E  S SSYTSE+++ N 
Sbjct: 479 EQSTVENPLHHVNQNMSNPSLFSSHRDGIQ-----SLMHVDGTESGSTSSYTSEEEDVNF 533

Query: 73  VTGIGTPGVKVWDSKSSR-RGSSHV 2
           VTG+ +PG KVWD K++R +  SH+
Sbjct: 534 VTGLDSPGTKVWDGKTNRNQAVSHI 558


>ref|XP_004506842.1| PREDICTED: uncharacterized protein LOC101514293 isoform X1 [Cicer
           arietinum]
          Length = 1113

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/85 (37%), Positives = 47/85 (55%)
 Frame = -1

Query: 271 SSGTSLQHTSSKANDTSKTNGVVSNPNTAVQFRHDNRGSEAVSLQKMDSFEDSMSSYTSE 92
           +SG S Q T   A+     NG   +  T+ +    N  S  +S        +S +SYTSE
Sbjct: 474 NSGYSSQFTVEDASFHGDKNGSTCSSVTSYKGDEHNHSSMQISES------ESNTSYTSE 527

Query: 91  DDENNSVTGIGTPGVKVWDSKSSRR 17
           DDE ++VTG+ +PG KVWD +S+R+
Sbjct: 528 DDETSAVTGLDSPGTKVWDGRSNRK 552


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