BLASTX nr result

ID: Ephedra25_contig00023486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00023486
         (832 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001165002.2| intracisternal A particle-promoted polypepti...    58   5e-06
gb|AAI57242.1| Unknown (protein for MGC:136076) [Xenopus (Silura...    58   5e-06
ref|XP_422442.2| PREDICTED: actin-binding protein IPP isoform X2...    57   6e-06
ref|XP_004936813.1| PREDICTED: actin-binding protein IPP isoform...    57   6e-06
ref|XP_003208863.1| PREDICTED: actin-binding protein IPP-like [M...    57   6e-06
dbj|GAA29188.2| kelch-like protein 3 [Clonorchis sinensis]             57   8e-06

>ref|NP_001165002.2| intracisternal A particle-promoted polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 538

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
 Frame = +3

Query: 9   FACVPYKSYVLVLGGQRH-GVGVSDFRIVDPIARSVKNGPDMLCERLDFVAAVVDNRLYA 185
           FAC   +  + V+GG  H G  +    + DPI R + + P M   R     A +++ LYA
Sbjct: 384 FACCERQGMIYVVGGISHEGTELRSAEVYDPITRRLMSLPPMGTRRAYLGVACLNDCLYA 443

Query: 186 VGGSYFDAFQPGEYAMANVECYDFASEKWFLVQPLPIPACTTRCYVDSSSSPPKLFVA-G 362
           VGG         + A+  VE + F  E+W  V P+ IP    RC V   S    L+ A G
Sbjct: 444 VGGG-----DDSQDALNTVEKFSFEEEQWVEVAPMKIP----RCGVSVVSVNGLLYAAGG 494

Query: 363 YHLDQNGS---TIYAMFSYCPALNSWTQM 440
             + QN +   T   +  Y P  +SWT +
Sbjct: 495 RSIKQNFTAPVTTDTVEVYNPHTDSWTDI 523


>gb|AAI57242.1| Unknown (protein for MGC:136076) [Xenopus (Silurana) tropicalis]
          Length = 512

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
 Frame = +3

Query: 9   FACVPYKSYVLVLGGQRH-GVGVSDFRIVDPIARSVKNGPDMLCERLDFVAAVVDNRLYA 185
           FAC   +  + V+GG  H G  +    + DPI R + + P M   R     A +++ LYA
Sbjct: 358 FACCERQGMIYVVGGISHEGTELRSAEVYDPITRRLMSLPPMGTRRAYLGVACLNDCLYA 417

Query: 186 VGGSYFDAFQPGEYAMANVECYDFASEKWFLVQPLPIPACTTRCYVDSSSSPPKLFVA-G 362
           VGG         + A+  VE + F  E+W  V P+ IP    RC V   S    L+ A G
Sbjct: 418 VGGG-----DDSQDALNTVEKFSFEEEQWVEVAPMKIP----RCGVSVVSVNGLLYAAGG 468

Query: 363 YHLDQNGS---TIYAMFSYCPALNSWTQM 440
             + QN +   T   +  Y P  +SWT +
Sbjct: 469 RSIKQNFTAPVTTDTVEVYNPHTDSWTDI 497


>ref|XP_422442.2| PREDICTED: actin-binding protein IPP isoform X2 [Gallus gallus]
          Length = 583

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
 Frame = +3

Query: 9   FACVPYKSYVLVLGGQRH-GVGVSDFRIVDPIARSVKNGPDMLCERLDFVAAVVDNRLYA 185
           F C   +  + V+GG  H GV +    + DPI++     P M   R     A +++ +YA
Sbjct: 429 FGCCEIQGLIYVVGGISHEGVELRSVEVYDPISKRWSELPPMGTRRAYLGVAALNDCIYA 488

Query: 186 VGGSYFDAFQPGEYAMANVECYDFASEKWFLVQPLPIP---ACTTR----CYVDSSSSPP 344
           VGG     +   + A+A VE Y F  EKW  V P+ +P    C        Y     +P 
Sbjct: 489 VGG-----WNESQDALATVERYSFEEEKWVEVAPMKMPRAGVCVVTVNGFLYASGGRAPS 543

Query: 345 KLFVAGYHLDQNGSTIYAMFSYCPALNSWTQM 440
             F A    D       ++  Y P ++SWT++
Sbjct: 544 HDFAAPVTSD-------SVEVYNPHMDSWTEI 568


>ref|XP_004936813.1| PREDICTED: actin-binding protein IPP isoform X3 [Gallus gallus]
          Length = 612

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
 Frame = +3

Query: 9   FACVPYKSYVLVLGGQRH-GVGVSDFRIVDPIARSVKNGPDMLCERLDFVAAVVDNRLYA 185
           F C   +  + V+GG  H GV +    + DPI++     P M   R     A +++ +YA
Sbjct: 458 FGCCEIQGLIYVVGGISHEGVELRSVEVYDPISKRWSELPPMGTRRAYLGVAALNDCIYA 517

Query: 186 VGGSYFDAFQPGEYAMANVECYDFASEKWFLVQPLPIP---ACTTR----CYVDSSSSPP 344
           VGG     +   + A+A VE Y F  EKW  V P+ +P    C        Y     +P 
Sbjct: 518 VGG-----WNESQDALATVERYSFEEEKWVEVAPMKMPRAGVCVVTVNGFLYASGGRAPS 572

Query: 345 KLFVAGYHLDQNGSTIYAMFSYCPALNSWTQM 440
             F A    D       ++  Y P ++SWT++
Sbjct: 573 HDFAAPVTSD-------SVEVYNPHMDSWTEI 597


>ref|XP_003208863.1| PREDICTED: actin-binding protein IPP-like [Meleagris gallopavo]
          Length = 583

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
 Frame = +3

Query: 9   FACVPYKSYVLVLGGQRH-GVGVSDFRIVDPIARSVKNGPDMLCERLDFVAAVVDNRLYA 185
           F C   +  + V+GG  H GV +    + DPI++     P M   R     A +++ +YA
Sbjct: 429 FGCCEIQGLIYVVGGISHEGVELRSVEVYDPISKRWSELPPMGTRRAYLGVAALNDCIYA 488

Query: 186 VGGSYFDAFQPGEYAMANVECYDFASEKWFLVQPLPIP---ACTTR----CYVDSSSSPP 344
           VGG     +   + A+A VE Y F  EKW  V P+ +P    C        Y     +P 
Sbjct: 489 VGG-----WNESQDALATVERYSFEEEKWVEVAPMKMPRAGVCVVTVNGFLYASGGRAPS 543

Query: 345 KLFVAGYHLDQNGSTIYAMFSYCPALNSWTQM 440
             F A    D       ++  Y P ++SWT++
Sbjct: 544 HDFAAPVTSD-------SVEVYNPHMDSWTEI 568


>dbj|GAA29188.2| kelch-like protein 3 [Clonorchis sinensis]
          Length = 1160

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 39/137 (28%), Positives = 62/137 (45%)
 Frame = +3

Query: 36   VLVLGGQRHGVGVSDFRIVDPIARSVKNGPDMLCERLDFVAAVVDNRLYAVGGSYFDAFQ 215
            V V+GG    + V    + DP   S  +GP+M C R     AV++ R+YAVGG  FD   
Sbjct: 920  VYVVGGFNGALRVRSVEVYDPARNSWHSGPNMECRRATLGVAVLNGRIYAVGG--FD--- 974

Query: 216  PGEYAMANVECYDFASEKWFLVQPLPIPACTTRCYVDSSSSPPKLFVAGYHLDQNGSTIY 395
             G   +   E  D  S  W  + P+   +C  R  V + +   K++  G +       + 
Sbjct: 975  -GNAGLNTAEVLDLCSGSWRFISPM---SC-RRSSVGAGALDGKIYAVGGYDGIARRCLS 1029

Query: 396  AMFSYCPALNSWTQMKE 446
            ++  Y P  N+WT + +
Sbjct: 1030 SVECYDPVANTWTPIAD 1046


Top