BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00023473
         (917 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containi...   165   2e-38
ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containi...   165   2e-38
ref|XP_002530894.1| pentatricopeptide repeat-containing protein,...   162   1e-37
ref|XP_006465352.1| PREDICTED: pentatricopeptide repeat-containi...   162   2e-37
ref|XP_006427239.1| hypothetical protein CICLE_v100269871mg, par...   160   6e-37
ref|XP_002305285.2| pentatricopeptide repeat-containing family p...   159   1e-36
gb|ESW16694.1| hypothetical protein PHAVU_007G177800g [Phaseolus...   157   7e-36
ref|XP_004305328.1| PREDICTED: pentatricopeptide repeat-containi...   156   9e-36
gb|EMJ17106.1| hypothetical protein PRUPE_ppa004160mg [Prunus pe...   155   2e-35
ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containi...   153   8e-35
ref|XP_006842064.1| hypothetical protein AMTR_s00078p00045650 [A...   153   8e-35
gb|EOY26490.1| Pentatricopeptide repeat (PPR) superfamily protei...   153   8e-35
ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi...   152   1e-34
emb|CBI36294.3| unnamed protein product [Vitis vinifera]              152   1e-34
ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containi...   151   4e-34
ref|XP_004235996.1| PREDICTED: pentatricopeptide repeat-containi...   149   1e-33
gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis]     148   3e-33
ref|NP_175673.1| pentatricopeptide repeat-containing protein [Ar...   147   7e-33
ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containi...   146   9e-33
ref|XP_002894392.1| pentatricopeptide repeat-containing protein ...   144   6e-32

>ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  165 bits (418), Expect = 2e-38
 Identities = 89/249 (35%), Positives = 137/249 (55%), Gaps = 1/249 (0%)
 Frame = -3

Query: 888  AYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRS 709
            AYN++L  LCK    DE YK++ EM ++G  PD  TY+  I + C+   L    R L R+
Sbjct: 257  AYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERT 316

Query: 708  DRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQ 529
             R    P+V  YN +I++LC  Q+ +EEA QI+D M+ + V PD  +Y+ +   HC   +
Sbjct: 317  KRKNLLPNVFTYNCVIKKLCKDQN-VEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSE 375

Query: 528  LRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYCA 349
            +  A  L  +M  D+       YNM+++  +R  +F+RA   WE +  +G   +VS Y  
Sbjct: 376  VNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAV 435

Query: 348  MIHELLKLGW-THEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMKRS 172
            MIH   K  W   EA  +F  MI + IPPY+ T + +   L+ +  ++ + I  D+MKRS
Sbjct: 436  MIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLGIGFKDQVAILGDKMKRS 495

Query: 171  MSSDIQDLS 145
             S  IQ+L+
Sbjct: 496  TSCSIQELA 504


>ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  165 bits (418), Expect = 2e-38
 Identities = 89/249 (35%), Positives = 137/249 (55%), Gaps = 1/249 (0%)
 Frame = -3

Query: 888  AYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRS 709
            AYN++L  LCK    DE YK++ EM ++G  PD  TY+  I + C+   L    R L R+
Sbjct: 257  AYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERT 316

Query: 708  DRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQ 529
             R    P+V  YN +I++LC  Q+ +EEA QI+D M+ + V PD  +Y+ +   HC   +
Sbjct: 317  KRKNLLPNVFTYNCVIKKLCKDQN-VEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSE 375

Query: 528  LRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYCA 349
            +  A  L  +M  D+       YNM+++  +R  +F+RA   WE +  +G   +VS Y  
Sbjct: 376  VNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAV 435

Query: 348  MIHELLKLGW-THEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMKRS 172
            MIH   K  W   EA  +F  MI + IPPY+ T + +   L+ +  ++ + I  D+MKRS
Sbjct: 436  MIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLGIGFKDQVAILGDKMKRS 495

Query: 171  MSSDIQDLS 145
             S  IQ+L+
Sbjct: 496  TSCSIQELA 504


>ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529547|gb|EEF31500.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  162 bits (411), Expect = 1e-37
 Identities = 87/250 (34%), Positives = 145/250 (58%), Gaps = 2/250 (0%)
 Frame = -3

Query: 888 AYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRS 709
           AYN++L   CK   + E YK++ EM ++G KPD  T++  I A CEA  + +A R L   
Sbjct: 250 AYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEM 309

Query: 708 DRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQ 529
            RY   P+V  YN +I++LC  ++ +EEA Q+++ ++ +   PD  +Y+ ++  HC+  +
Sbjct: 310 KRYDLVPNVFTYNCMIKKLC-KKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSE 368

Query: 528 LRIASKLFDKMLEDE-IPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYC 352
           +  A++L  +M++D  +P  H  YNML++  IR  +F+RA+  WE +  KG   +VS Y 
Sbjct: 369 VNSATRLISRMVKDNCLPDKHS-YNMLLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYS 427

Query: 351 AMIHELL-KLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMKR 175
            M+H L  K G   EA  +F  MI + IPPY  T + + + L+ L   + + I   +M+ 
Sbjct: 428 VMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVEILRNRLIGLGLLDYIEILAGKMEH 487

Query: 174 SMSSDIQDLS 145
           S +  IQ+L+
Sbjct: 488 STACSIQELA 497



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 2/211 (0%)
 Frame = -3

Query: 858 KPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRSDRYGFTPSVT 679
           + +L  +  + +  M+  G KP       L+  LC+ K  K A +   R  ++ F     
Sbjct: 156 RANLPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRV-KHQFQTRAK 214

Query: 678 AYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQLRIASKLFDK 499
            Y+ ++       +++  A ++ D M  +    D   Y+ L+ + C+ G++  A K+F +
Sbjct: 215 TYSILVRGWGDIGESVS-ACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFRE 273

Query: 498 MLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYCAMIHELLKLGW 319
           M  + I      +++ IRA         A    ++++   LV NV  Y  MI +L K   
Sbjct: 274 MGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEK 333

Query: 318 THEAVHFFNEMIKKAIPP--YVYTCKFMMHC 232
             EA    NE+I+++  P  + Y      HC
Sbjct: 334 VEEAYQLLNEIIERSGQPDAWSYNAILAYHC 364


>ref|XP_006465352.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Citrus sinensis]
          Length = 531

 Score =  162 bits (409), Expect = 2e-37
 Identities = 84/249 (33%), Positives = 140/249 (56%), Gaps = 1/249 (0%)
 Frame = -3

Query: 888  AYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRS 709
            A+N++L  +CK   +DE + +  EM + G +PD  +Y+  I A CEA  +    R L   
Sbjct: 262  AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 321

Query: 708  DRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQ 529
             RY   P+V  YN II++LC ++  +EEA Q++D M+ +   PD  +Y+ ++  HC   +
Sbjct: 322  KRYNLVPNVFTYNCIIKKLCKNEK-VEEAYQLLDEMIERGANPDEWSYNAILAYHCDHAE 380

Query: 528  LRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYCA 349
            + +A +L  +M ++ +      YNM+++  +R  +F+RA   WE +E +G   +VS Y  
Sbjct: 381  VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 440

Query: 348  MIHELL-KLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMKRS 172
            M+H L  K G   EA  +F  M+ + IPPY  T + + + LV L   + + I  D+M+RS
Sbjct: 441  MVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDVIEILADKMERS 500

Query: 171  MSSDIQDLS 145
             S  IQ+L+
Sbjct: 501  TSCTIQELA 509



 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 2/230 (0%)
 Frame = -3

Query: 915 NKQLDNALEAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLK 736
           N+  +   E +  +     + +L ++  + ++ M+  G KP       L+ ALC+ K +K
Sbjct: 149 NQSFEINPEIFWIVFRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVK 208

Query: 735 VAVRTLIRSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHL 556
           VA      + ++  TP+V  Y+ ++  L      L EAR++ D ML +    D   ++ L
Sbjct: 209 VA-HQFFDNVKHEITPTVKTYSILVRGL-GDVGELSEARKLFDEMLERKCPVDILAHNSL 266

Query: 555 ICSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGL 376
           + + C+ G +  A  +  +M           Y++ I A              + ++   L
Sbjct: 267 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 326

Query: 375 VKNVSNYCAMIHELLKLGWTHEAVHFFNEMIKKAIPP--YVYTCKFMMHC 232
           V NV  Y  +I +L K     EA    +EMI++   P  + Y      HC
Sbjct: 327 VPNVFTYNCIIKKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 376



 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 45/184 (24%), Positives = 80/184 (43%)
 Frame = -3

Query: 732 AVRTLIRSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLI 553
           A+R   R   +G  PS+   + ++  LC  +  ++ A Q  D++   ++ P  +TYS L+
Sbjct: 175 AIRAFNRMVEFGIKPSIYDLDQLLHALCKRKH-VKVAHQFFDNV-KHEITPTVKTYSILV 232

Query: 552 CSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLV 373
                 G+L  A KLFD+MLE + P     +N L+ A  +    + A     ++ + G  
Sbjct: 233 RGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE 292

Query: 372 KNVSNYCAMIHELLKLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIF 193
            +  +Y   IH   +    H      + M +  + P V+T   ++  L K +     Y  
Sbjct: 293 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIKKLCKNEKVEEAYQL 352

Query: 192 HDRM 181
            D M
Sbjct: 353 LDEM 356


>ref|XP_006427239.1| hypothetical protein CICLE_v100269871mg, partial [Citrus
           clementina] gi|557529229|gb|ESR40479.1| hypothetical
           protein CICLE_v100269871mg, partial [Citrus clementina]
          Length = 436

 Score =  160 bits (405), Expect = 6e-37
 Identities = 84/249 (33%), Positives = 139/249 (55%), Gaps = 1/249 (0%)
 Frame = -3

Query: 888 AYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRS 709
           A+N++L  +CK   +DE + +  EM + G +PD  +Y+  I A CEA  +    R L   
Sbjct: 167 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 226

Query: 708 DRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQ 529
            RY   P+V  YN II +LC ++  +EEA Q++D M+ +   PD  +Y+ ++  HC   +
Sbjct: 227 KRYNLVPNVFTYNCIIRKLCKNEK-VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 285

Query: 528 LRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYCA 349
           + +A +L  +M ++ +      YNM+++  +R  +F+RA   WE +E +G   +VS Y  
Sbjct: 286 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 345

Query: 348 MIHELL-KLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMKRS 172
           M+H L  K G   EA  +F  M+ + IPPY  T + + + LV L   + + I  D+M+RS
Sbjct: 346 MVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 405

Query: 171 MSSDIQDLS 145
            S  IQ+L+
Sbjct: 406 TSCTIQELA 414



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 2/230 (0%)
 Frame = -3

Query: 915 NKQLDNALEAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLK 736
           N+  +   E +  +L    + +L ++  + ++ M+  G KP       L+ ALC+ K +K
Sbjct: 54  NQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVK 113

Query: 735 VAVRTLIRSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHL 556
           VA      + ++ FTP+V  Y+ ++  L      L EAR++ D ML +    D   ++ L
Sbjct: 114 VA-HQFFDNAKHEFTPTVKTYSILVRGL-GDVGELSEARKLFDEMLERKCPVDILAHNSL 171

Query: 555 ICSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGL 376
           + + C+ G +  A  +  +M           Y++ I A              + ++   L
Sbjct: 172 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 231

Query: 375 VKNVSNYCAMIHELLKLGWTHEAVHFFNEMIKKAIPP--YVYTCKFMMHC 232
           V NV  Y  +I +L K     EA    +EMI++   P  + Y      HC
Sbjct: 232 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 281



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 45/184 (24%), Positives = 78/184 (42%)
 Frame = -3

Query: 732 AVRTLIRSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLI 553
           A+R   R   +G  PS+   + ++  LC  +  ++ A Q  D+    +  P  +TYS L+
Sbjct: 80  AIRAFNRMVEFGIKPSIYDLDQLLHALCKRKH-VKVAHQFFDNA-KHEFTPTVKTYSILV 137

Query: 552 CSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLV 373
                 G+L  A KLFD+MLE + P     +N L+ A  +    + A     ++ + G  
Sbjct: 138 RGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE 197

Query: 372 KNVSNYCAMIHELLKLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIF 193
            +  +Y   IH   +    H      + M +  + P V+T   ++  L K +     Y  
Sbjct: 198 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL 257

Query: 192 HDRM 181
            D M
Sbjct: 258 LDEM 261



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
 Frame = -3

Query: 885 YNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRS- 709
           YN ++  LCK + ++E Y+L  EM+  G  PD  +Y A++   C+  ++ +A+R + R  
Sbjct: 238 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 297

Query: 708 ----------------------------------DRYGFTPSVTAYNAIIEQLCTSQDTL 631
                                             ++ GF PSV+ Y+ ++  LC  +  L
Sbjct: 298 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 357

Query: 630 EEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNML 451
           EEA +  + M+ + + P   T   L       G L I   L DKM      T  +L N +
Sbjct: 358 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAM 417


>ref|XP_002305285.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550340729|gb|EEE85796.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 523

 Score =  159 bits (402), Expect = 1e-36
 Identities = 86/250 (34%), Positives = 137/250 (54%), Gaps = 1/250 (0%)
 Frame = -3

Query: 888  AYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRS 709
            AYN++L  LCK   +DE YK++ E+ + G +PD  +Y   I A CEA  +      L R 
Sbjct: 254  AYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRM 313

Query: 708  DRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQ 529
             RY   P+V  YN II++LC +   +E+A Q++  M+ + V PD  +Y+ ++  HC+  +
Sbjct: 314  KRYDLVPNVFTYNCIIKKLCKN-GKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSE 372

Query: 528  LRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYCA 349
            +  A+KL   M++D        YNML++  +R  +F+RA   WE +  +G   +VS Y  
Sbjct: 373  VNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSV 432

Query: 348  MIHELL-KLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMKRS 172
            MIH L  K G   EA  +F  MI + IPPY  T + + + L+     + + I   +M+R 
Sbjct: 433  MIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLRNRLIGFGLLDHIEILACKMERG 492

Query: 171  MSSDIQDLSR 142
             S  IQ+L++
Sbjct: 493  TSCSIQELAK 502



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 47/211 (22%), Positives = 89/211 (42%), Gaps = 2/211 (0%)
 Frame = -3

Query: 858 KPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRSDRYGFTPSVT 679
           + +L  +  + +  M   G +P       L+  LC+ K +K A +   R  ++ F     
Sbjct: 160 RANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRV-KHKFEAKAK 218

Query: 678 AYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQLRIASKLFDK 499
            Y+ ++       + +E AR++ D ML +    D   Y+ L+ + C+ G +  A K+F +
Sbjct: 219 TYSILVRGWGDIGEAVE-ARKVFDEMLGRGCALDVLAYNSLLEALCKGGNVDEAYKMFRE 277

Query: 498 MLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYCAMIHELLKLGW 319
           +    +      Y + IRA              + ++   LV NV  Y  +I +L K G 
Sbjct: 278 IGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGK 337

Query: 318 THEAVHFFNEMIKKAIPP--YVYTCKFMMHC 232
             +A    +EM+++ + P  + Y      HC
Sbjct: 338 VEDAYQLLHEMMERGVSPDAWSYNTILAYHC 368


>gb|ESW16694.1| hypothetical protein PHAVU_007G177800g [Phaseolus vulgaris]
          Length = 524

 Score =  157 bits (396), Expect = 7e-36
 Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 1/261 (0%)
 Frame = -3

Query: 894  LEAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLI 715
            L AYN +L  LCK   +DE  K +H+M+  G +PD  TY+  I   C A  ++ A R L 
Sbjct: 251  LLAYNNLLGALCKSGCVDEAKKFFHDMLLKGVEPDAFTYSIFIHFYCNANNVQSAFRVLD 310

Query: 714  RSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQF 535
            +  RY   P+V  YN II++LC   + +EEA Q++D M+S  V PD  +Y+ +   HC  
Sbjct: 311  KMKRYNLLPNVFTYNCIIKRLC-KNELVEEAYQLLDEMISIGVKPDIWSYNAIQAYHCDH 369

Query: 534  GQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNY 355
             ++  A +L  +M +D        YNM+++  IR  +F++    WE++  K    +VS Y
Sbjct: 370  CEVNRALRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVNKSFFPSVSTY 429

Query: 354  CAMIHELL-KLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMK 178
              +IH    K G   EA  +F  MI + IPPYV T + + + L+ L   + + I  D+M+
Sbjct: 430  SVLIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVELLRNRLLGLGLLDHIEILIDKMR 489

Query: 177  RSMSSDIQDLSRYFVPARDRR 115
            +S S  IQ+L+   +  R  R
Sbjct: 490  QSSSHAIQELANIMIGNRAAR 510



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 47/184 (25%), Positives = 80/184 (43%)
 Frame = -3

Query: 732 AVRTLIRSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLI 553
           A+R+  R D +G TP+V   + ++  LC  +  L++A+Q  D   ++  L   +TYS LI
Sbjct: 166 AIRSFNRMDEFGITPTVHDLDKLLYFLCKRKH-LKQAQQFFDKAKNRFSL-SAKTYSILI 223

Query: 552 CSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLV 373
               + G      +LF+ ML    P     YN L+ A  +    + A  ++ D+  KG+ 
Sbjct: 224 SGWGEIGDSDKVHELFEAMLGQGCPLDLLAYNNLLGALCKSGCVDEAKKFFHDMLLKGVE 283

Query: 372 KNVSNYCAMIHELLKLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIF 193
            +   Y   IH          A    ++M +  + P V+T   ++  L K +     Y  
Sbjct: 284 PDAFTYSIFIHFYCNANNVQSAFRVLDKMKRYNLLPNVFTYNCIIKRLCKNELVEEAYQL 343

Query: 192 HDRM 181
            D M
Sbjct: 344 LDEM 347


>ref|XP_004305328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 734

 Score =  156 bits (395), Expect = 9e-36
 Identities = 94/273 (34%), Positives = 144/273 (52%), Gaps = 10/273 (3%)
 Frame = -3

Query: 888  AYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRS 709
            AYN+ L  LCK   +DE YK++ EM + G +PD  TY+  I A CEA  +      L R 
Sbjct: 394  AYNSYLEALCKGGNVDEAYKIFREMGSKGVEPDAGTYSIFIRAYCEANDIHSVFSVLDRM 453

Query: 708  DRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQ 529
             RY    +V  YN +I++LC ++  +EEA Q++D M+   V PD  +Y+ +   HC+ G+
Sbjct: 454  KRYNLLANVFTYNCVIKKLCKNE-RVEEAYQLLDEMIEMGVKPDEWSYNAIQAYHCEHGE 512

Query: 528  LRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYCA 349
            +  A +L  +M +D     H  YNM+++  IR  +F+RA   WE +  +G   +VS Y  
Sbjct: 513  VNQALRLLSRMEKDSCMPDHHTYNMVLKLLIRIGRFDRATDVWERMGKRGFYPSVSTYSV 572

Query: 348  MIHELLKLGW-THEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMKRS 172
            MIH L K      EA  +F  MI + IPPY  T + + + L+ L   + + I   +M++S
Sbjct: 573  MIHGLCKKKHKLEEACKYFEIMIDEGIPPYSSTVEMLRNRLLGLGLLDDIEILARKMEQS 632

Query: 171  MSSDIQDLSRYF-VPARDRR--------FRPPP 100
             S   Q+ ++   V  R RR        + PPP
Sbjct: 633  SSCSTQEFAKKVGVQCRPRRAPRVIEVNWHPPP 665



 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 5/225 (2%)
 Frame = -3

Query: 891 EAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIR 712
           E +  +  V  + +L  +  + Y  M+  G KP       L+  LC+ K +K A +    
Sbjct: 289 ELFWVIFRVYSRANLPRDAIRAYSRMVEFGIKPSIHDLDHLLYTLCKRKHVKHA-QEFFD 347

Query: 711 SDRYGFTPSVTAYNAIIE---QLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHC 541
             + GF      Y+ ++     +C S    + AR++ D M  K  L D   Y+  + + C
Sbjct: 348 KVKSGFELGAKTYSILMRGWGDICDS----DNARKLFDEMTEKGCLVDVPAYNSYLEALC 403

Query: 540 QFGQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVS 361
           + G +  A K+F +M    +      Y++ IRA              + ++   L+ NV 
Sbjct: 404 KGGNVDEAYKIFREMGSKGVEPDAGTYSIFIRAYCEANDIHSVFSVLDRMKRYNLLANVF 463

Query: 360 NYCAMIHELLKLGWTHEAVHFFNEMIKKAIPP--YVYTCKFMMHC 232
            Y  +I +L K     EA    +EMI+  + P  + Y      HC
Sbjct: 464 TYNCVIKKLCKNERVEEAYQLLDEMIEMGVKPDEWSYNAIQAYHC 508


>gb|EMJ17106.1| hypothetical protein PRUPE_ppa004160mg [Prunus persica]
          Length = 526

 Score =  155 bits (392), Expect = 2e-35
 Identities = 87/249 (34%), Positives = 134/249 (53%), Gaps = 1/249 (0%)
 Frame = -3

Query: 888 AYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRS 709
           AYN+ L  LCK   +DE YK++  M ++G  PD  TY+  I A CEA  +    R L R 
Sbjct: 256 AYNSYLEALCKGGKVDEAYKIFRGMGSNGTDPDACTYSIFIRAYCEANDIHSVFRVLDRM 315

Query: 708 DRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQ 529
            RY   P+V +YN II++LC + D +EEA +++D M+ + V+PD  +Y+ +   HC   +
Sbjct: 316 KRYNLLPNVYSYNCIIKKLCKN-DKVEEAYELLDEMIERGVMPDAWSYNAIQAHHCDHCE 374

Query: 528 LRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYCA 349
           +  A +L  +M +D        YNM+++  IR  +F+RA   WE +  +G   +VS Y  
Sbjct: 375 VNRALRLLSRMKKDNCKPDRHTYNMVLKLLIRIGRFDRATEVWESMGERGFYPSVSTYSV 434

Query: 348 MIHELLKLGW-THEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMKRS 172
           MIH L K      EA  +F  MI + IPPY  T + + + L  L       I   +M++S
Sbjct: 435 MIHGLCKKKHKLEEACKYFEIMIDEGIPPYFSTVEMLKNRLRGLGLLEHTEILASKMEQS 494

Query: 171 MSSDIQDLS 145
               IQ+++
Sbjct: 495 TCCSIQEMA 503



 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 2/230 (0%)
 Frame = -3

Query: 915 NKQLDNALEAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLK 736
           +K ++   E +  +  V  + +L  +  + ++ M+  G KP       L+  LC+ K +K
Sbjct: 143 SKCIEIVPEVFWLIFRVYSRANLPRDAIRAFNRMVEFGIKPSVLDLDQLMYTLCKRKHVK 202

Query: 735 VAVRTLIRSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHL 556
            A        + GF  +   Y+ ++       D+ +EAR++ D M  +  L D   Y+  
Sbjct: 203 YA-HEFFDKVKSGFELNAKIYSILMRGWGDIGDS-DEARKLFDEMTERGCLVDVPAYNSY 260

Query: 555 ICSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGL 376
           + + C+ G++  A K+F  M  +        Y++ IRA              + ++   L
Sbjct: 261 LEALCKGGKVDEAYKIFRGMGSNGTDPDACTYSIFIRAYCEANDIHSVFRVLDRMKRYNL 320

Query: 375 VKNVSNYCAMIHELLKLGWTHEAVHFFNEMIKKAIPP--YVYTCKFMMHC 232
           + NV +Y  +I +L K     EA    +EMI++ + P  + Y      HC
Sbjct: 321 LPNVYSYNCIIKKLCKNDKVEEAYELLDEMIERGVMPDAWSYNAIQAHHC 370



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 35/181 (19%)
 Frame = -3

Query: 888 AYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRS 709
           +YN ++  LCK D ++E Y+L  EM+  G  PD  +Y A+    C+  ++  A+R L R 
Sbjct: 326 SYNCIIKKLCKNDKVEEAYELLDEMIERGVMPDAWSYNAIQAHHCDHCEVNRALRLLSRM 385

Query: 708 -------DRY----------------------------GFTPSVTAYNAIIEQLCTSQDT 634
                  DR+                            GF PSV+ Y+ +I  LC  +  
Sbjct: 386 KKDNCKPDRHTYNMVLKLLIRIGRFDRATEVWESMGERGFYPSVSTYSVMIHGLCKKKHK 445

Query: 633 LEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNM 454
           LEEA +  + M+ + + P F T   L       G L     L  KM +    +  ++ N+
Sbjct: 446 LEEACKYFEIMIDEGIPPYFSTVEMLKNRLRGLGLLEHTEILASKMEQSTCCSIQEMANL 505

Query: 453 L 451
           +
Sbjct: 506 M 506


>ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Solanum tuberosum]
          Length = 550

 Score =  153 bits (387), Expect = 8e-35
 Identities = 86/251 (34%), Positives = 137/251 (54%), Gaps = 1/251 (0%)
 Frame = -3

Query: 894  LEAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLI 715
            L AYN++L  LCK   +DE +  + +M + G  PD  +Y+  I   C A  +    R L 
Sbjct: 277  LLAYNSILDSLCKAGKMDEAFNFFMKMRSIGLIPDAFSYSIFIHGYCTANDIHSVFRVLD 336

Query: 714  RSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQF 535
            +  RY   P+V  YN II++LC ++  ++EA Q++D M+S+ V PD  +Y+ ++ SHC  
Sbjct: 337  QMRRYKLVPNVFTYNCIIKKLCKTKK-VDEAYQLIDEMISEGVRPDCWSYNTILASHCDH 395

Query: 534  GQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNY 355
             ++ +A +L  +M ++        YNML++  IR  +F+R    WE +E +    +VS Y
Sbjct: 396  NEVNLAHRLVSRMEQNNCLPDKHTYNMLLKMLIRVGRFDRVEKVWESMEDRNFYPSVSTY 455

Query: 354  CAMIHELL-KLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMK 178
              M+H    K G   EA  +F  MI + IPPY  TC+ + + L+         I  D+M+
Sbjct: 456  SVMVHGFCQKKGKLEEACKYFEMMIDEGIPPYTETCEKLRNRLIGHGFAEQTEILADKME 515

Query: 177  RSMSSDIQDLS 145
            RS SS IQ+L+
Sbjct: 516  RSTSSLIQELA 526



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 43/184 (23%), Positives = 81/184 (44%)
 Frame = -3

Query: 732 AVRTLIRSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLI 553
           A+R   +   +G  P +   + ++  LC  +   ++A++  D +   D +P  +TYS LI
Sbjct: 192 AIRAFNKMVDFGIKPCLADLDKLLLALCKRKHA-KQAQEFFDKV-KDDFMPSVKTYSILI 249

Query: 552 CSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLV 373
                 G++  A KLFD+MLE         YN ++ +  +  K + A  ++  + + GL+
Sbjct: 250 RGWGDLGEVAEAQKLFDEMLERGCSVDLLAYNSILDSLCKAGKMDEAFNFFMKMRSIGLI 309

Query: 372 KNVSNYCAMIHELLKLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIF 193
            +  +Y   IH        H      ++M +  + P V+T   ++  L K    +  Y  
Sbjct: 310 PDAFSYSIFIHGYCTANDIHSVFRVLDQMRRYKLVPNVFTYNCIIKKLCKTKKVDEAYQL 369

Query: 192 HDRM 181
            D M
Sbjct: 370 IDEM 373


>ref|XP_006842064.1| hypothetical protein AMTR_s00078p00045650 [Amborella trichopoda]
            gi|548844113|gb|ERN03739.1| hypothetical protein
            AMTR_s00078p00045650 [Amborella trichopoda]
          Length = 595

 Score =  153 bits (387), Expect = 8e-35
 Identities = 82/251 (32%), Positives = 136/251 (54%)
 Frame = -3

Query: 888  AYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRS 709
            AYN +L  LCK   +D  +KL+ EM + G  PD  +Y+  + A  EA  +  A+R     
Sbjct: 306  AYNTLLGSLCKSGKVDYAHKLFREMGSYGLVPDAFSYSTFVNAYSEADDVNSAIRVFDSM 365

Query: 708  DRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQ 529
             R+   P+V  YN++I+ LC ++  +++A  ++D M+ K + PD  +Y+ ++  HC   +
Sbjct: 366  RRHNLVPNVYTYNSLIKVLCKNE-RVDDAYGLLDEMIEKGLSPDLWSYNTILAIHCNVRE 424

Query: 528  LRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYCA 349
            +  A +L ++M  D        YNML++  I   +F+RA+  W  +E +G    V+ Y  
Sbjct: 425  VNKALRLLNRMDRDLCKPDKHTYNMLLKMLILVGRFDRAVKVWNGMEERGFYPAVTTYAV 484

Query: 348  MIHELLKLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMKRSM 169
            MIH L K G   +A   F  MI + +PPY  TC+ + + LV L  Q+   +  ++M+R+ 
Sbjct: 485  MIHGLCKRGRIEDACSHFETMIDEGVPPYTSTCELIRNHLVHLGMQDKARVIANKMQRAS 544

Query: 168  SSDIQDLSRYF 136
            S  IQ+LS  F
Sbjct: 545  SCSIQELSIMF 555



 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 50/246 (20%), Positives = 109/246 (44%), Gaps = 1/246 (0%)
 Frame = -3

Query: 891 EAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIR 712
           ++Y  ++ +L        ++ L   M  DG +     +  +  +   A     A+R   R
Sbjct: 166 QSYRILVDILGSNRHFPMIWDLVFGMKNDGFEIKRELFWVMFRSYARANLPTDAIRAFRR 225

Query: 711 SDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFG 532
            + +G  PS+   + +I  LC  +  ++ A +  +    +  +   ++YS LI    + G
Sbjct: 226 MEEFGIKPSIDDLDQLIYTLCKHR-LVDYAHKFFEKAKFEFAVSS-KSYSILINGWGEIG 283

Query: 531 QLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYC 352
               A  LF +M+++++P     YN L+ +  +  K + A   + ++ + GLV +  +Y 
Sbjct: 284 NWVEAESLFHEMVKEKVPLDIVAYNTLLGSLCKSGKVDYAHKLFREMGSYGLVPDAFSYS 343

Query: 351 AMIHELLKLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRM-KR 175
             ++   +    + A+  F+ M +  + P VYT   ++  L K +  +  Y   D M ++
Sbjct: 344 TFVNAYSEADDVNSAIRVFDSMRRHNLVPNVYTYNSLIKVLCKNERVDDAYGLLDEMIEK 403

Query: 174 SMSSDI 157
            +S D+
Sbjct: 404 GLSPDL 409


>gb|EOY26490.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 520

 Score =  153 bits (387), Expect = 8e-35
 Identities = 86/249 (34%), Positives = 135/249 (54%), Gaps = 1/249 (0%)
 Frame = -3

Query: 888 AYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRS 709
           AYN +L  LCK   +DE YK++  M +   + D  +Y+  I A CEA  +  A R L R 
Sbjct: 251 AYNCLLEALCKSGNVDEAYKMFGAMGSSRIELDACSYSVFIRAYCEANDIHAAFRVLDRM 310

Query: 708 DRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQ 529
            RY   P++  YN II +LC + D ++EA Q++  M+ + + PD  +Y+ ++  HC+  +
Sbjct: 311 RRYNLVPNLFTYNCIIRKLCNN-DKVDEAYQLLTEMIERGISPDEWSYNAILAYHCEHSE 369

Query: 528 LRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYCA 349
           +  A  L  +M ++E       YNM ++  IR  +F+RA   WE +  +G   +VS Y  
Sbjct: 370 VNRALNLISRMEKNECFPDRHTYNMALKLLIRIGRFDRATELWESMANRGFYPSVSTYAV 429

Query: 348 MIHELL-KLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMKRS 172
           MIH L  K G   EA  +F  MI + IPPY  T + + + L+ L   + + I  ++M RS
Sbjct: 430 MIHGLCKKRGKLEEACRYFEIMIDEGIPPYSSTVELLRNRLLGLGFLDNIEILANKMARS 489

Query: 171 MSSDIQDLS 145
            S  IQ+L+
Sbjct: 490 SSCSIQELA 498



 Score = 67.0 bits (162), Expect = 9e-09
 Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 2/229 (0%)
 Frame = -3

Query: 912 KQLDNALEAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKV 733
           KQ +   E +  +    C+ +L  +  + +  M+  G +P       L+  LC+ K +K 
Sbjct: 139 KQFEINPEIFWVVFRAYCRANLPGDAIRAFDRMVEFGIRPSIHDVDQLLFVLCKRKHVKQ 198

Query: 732 AVRTLIRSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLI 553
           A     R  ++ F PS  +Y+ ++       +  + AR++ D M+ +    D   Y+ L+
Sbjct: 199 AQGFFDRV-KHEFEPSAKSYSILVRGWGDIGEACQ-ARKVFDEMVQRGCSIDVLAYNCLL 256

Query: 552 CSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLV 373
            + C+ G +  A K+F  M    I      Y++ IRA         A    + +    LV
Sbjct: 257 EALCKSGNVDEAYKMFGAMGSSRIELDACSYSVFIRAYCEANDIHAAFRVLDRMRRYNLV 316

Query: 372 KNVSNYCAMIHELLKLGWTHEAVHFFNEMIKKAIPP--YVYTCKFMMHC 232
            N+  Y  +I +L       EA     EMI++ I P  + Y      HC
Sbjct: 317 PNLFTYNCIIRKLCNNDKVDEAYQLLTEMIERGISPDEWSYNAILAYHC 365



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
 Frame = -3

Query: 894 LEAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLI 715
           L  YN ++  LC  D +DE Y+L  EM+  G  PD  +Y A++   CE  ++  A+  + 
Sbjct: 319 LFTYNCIIRKLCNNDKVDEAYQLLTEMIERGISPDEWSYNAILAYHCEHSEVNRALNLIS 378

Query: 714 RSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHC-Q 538
           R ++    P    YN  + +L       + A ++ +SM ++   P   TY+ +I   C +
Sbjct: 379 RMEKNECFPDRHTYNMAL-KLLIRIGRFDRATELWESMANRGFYPSVSTYAVMIHGLCKK 437

Query: 537 FGQLRIASKLFDKMLEDEIP 478
            G+L  A + F+ M+++ IP
Sbjct: 438 RGKLEEACRYFEIMIDEGIP 457


>ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Vitis vinifera]
          Length = 624

 Score =  152 bits (385), Expect = 1e-34
 Identities = 83/249 (33%), Positives = 133/249 (53%), Gaps = 1/249 (0%)
 Frame = -3

Query: 888 AYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRS 709
           AYN++L  LCK   +DE YKL+ EM ++G  PD  +Y+  I A CE   +  A + L R 
Sbjct: 256 AYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRM 315

Query: 708 DRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQ 529
            RY   P+V  YN I+++LC S + ++EA Q++D M+ + V PD  +Y+ +   HC   +
Sbjct: 316 RRYNLVPNVFTYNCIVKKLCKS-EKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCE 374

Query: 528 LRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYCA 349
           +  A +L  +M ++        YNM+++  +R  +F+R    W  +E +G     S Y  
Sbjct: 375 VNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAV 434

Query: 348 MIHELL-KLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMKRS 172
           M+H    K G   EA  +F  MI   IPPY  T + + + ++ L     + +   +M+RS
Sbjct: 435 MVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQIDVLAGKMERS 494

Query: 171 MSSDIQDLS 145
            S  IQ+LS
Sbjct: 495 TSCVIQELS 503



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 2/222 (0%)
 Frame = -3

Query: 891 EAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIR 712
           E +  +    C+ +L  +  + +H+M   G K        L+  LC+ K +K A +    
Sbjct: 151 EIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQA-QEFFD 209

Query: 711 SDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFG 532
                  P+   Y+ ++       D+  EAR++ + M  +    D   Y+ L+ + C+ G
Sbjct: 210 KVNVEVMPNAKTYSILMRGWGDVGDS-SEARKLFEEMRERGCAVDVVAYNSLLEALCKGG 268

Query: 531 QLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYC 352
            +  A KLF +M  + +      Y++ IRA         A    + +    LV NV  Y 
Sbjct: 269 NVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYN 328

Query: 351 AMIHELLKLGWTHEAVHFFNEMIKKAIPP--YVYTCKFMMHC 232
            ++ +L K     EA    +EMI++ + P  + Y      HC
Sbjct: 329 CIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHC 370



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 47/203 (23%), Positives = 90/203 (44%), Gaps = 1/203 (0%)
 Frame = -3

Query: 762 ALCEAKKLKVAVRTLIRSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVL 583
           A C A     A+R   +   +G    V   + ++  LC  +  +++A++  D + + +V+
Sbjct: 159 AYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKH-VKQAQEFFDKV-NVEVM 216

Query: 582 PDFRTYSHLICSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYY 403
           P+ +TYS L+      G    A KLF++M E         YN L+ A  +    + A   
Sbjct: 217 PNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKL 276

Query: 402 WEDIEAKGLVKNVSNYCAMIHELLKLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVK 223
           + ++ + GL  +  +Y   I    ++   H A    + M +  + P V+T   ++  L K
Sbjct: 277 FREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCK 336

Query: 222 LDDQNAMYIFHDRM-KRSMSSDI 157
            +  +  Y   D M +R +S D+
Sbjct: 337 SEKVDEAYQLLDEMIERGVSPDL 359


>emb|CBI36294.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  152 bits (385), Expect = 1e-34
 Identities = 83/249 (33%), Positives = 133/249 (53%), Gaps = 1/249 (0%)
 Frame = -3

Query: 888 AYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRS 709
           AYN++L  LCK   +DE YKL+ EM ++G  PD  +Y+  I A CE   +  A + L R 
Sbjct: 229 AYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRM 288

Query: 708 DRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQ 529
            RY   P+V  YN I+++LC S + ++EA Q++D M+ + V PD  +Y+ +   HC   +
Sbjct: 289 RRYNLVPNVFTYNCIVKKLCKS-EKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCE 347

Query: 528 LRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYCA 349
           +  A +L  +M ++        YNM+++  +R  +F+R    W  +E +G     S Y  
Sbjct: 348 VNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAV 407

Query: 348 MIHELL-KLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMKRS 172
           M+H    K G   EA  +F  MI   IPPY  T + + + ++ L     + +   +M+RS
Sbjct: 408 MVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQIDVLAGKMERS 467

Query: 171 MSSDIQDLS 145
            S  IQ+LS
Sbjct: 468 TSCVIQELS 476



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 2/222 (0%)
 Frame = -3

Query: 891 EAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIR 712
           E +  +    C+ +L  +  + +H+M   G K        L+  LC+ K +K A +    
Sbjct: 124 EIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQA-QEFFD 182

Query: 711 SDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFG 532
                  P+   Y+ ++       D+  EAR++ + M  +    D   Y+ L+ + C+ G
Sbjct: 183 KVNVEVMPNAKTYSILMRGWGDVGDS-SEARKLFEEMRERGCAVDVVAYNSLLEALCKGG 241

Query: 531 QLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYC 352
            +  A KLF +M  + +      Y++ IRA         A    + +    LV NV  Y 
Sbjct: 242 NVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYN 301

Query: 351 AMIHELLKLGWTHEAVHFFNEMIKKAIPP--YVYTCKFMMHC 232
            ++ +L K     EA    +EMI++ + P  + Y      HC
Sbjct: 302 CIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHC 343



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 47/203 (23%), Positives = 90/203 (44%), Gaps = 1/203 (0%)
 Frame = -3

Query: 762 ALCEAKKLKVAVRTLIRSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVL 583
           A C A     A+R   +   +G    V   + ++  LC  +  +++A++  D + + +V+
Sbjct: 132 AYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKH-VKQAQEFFDKV-NVEVM 189

Query: 582 PDFRTYSHLICSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYY 403
           P+ +TYS L+      G    A KLF++M E         YN L+ A  +    + A   
Sbjct: 190 PNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKL 249

Query: 402 WEDIEAKGLVKNVSNYCAMIHELLKLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVK 223
           + ++ + GL  +  +Y   I    ++   H A    + M +  + P V+T   ++  L K
Sbjct: 250 FREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCK 309

Query: 222 LDDQNAMYIFHDRM-KRSMSSDI 157
            +  +  Y   D M +R +S D+
Sbjct: 310 SEKVDEAYQLLDEMIERGVSPDL 332


>ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Glycine max]
          Length = 523

 Score =  151 bits (381), Expect = 4e-34
 Identities = 88/258 (34%), Positives = 142/258 (55%), Gaps = 1/258 (0%)
 Frame = -3

Query: 894  LEAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLI 715
            L AYN +L  LCK   +DE   ++H+M++   +PD  TY+  I + C+A  ++ A R L 
Sbjct: 251  LLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLD 310

Query: 714  RSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQF 535
            +  RY   P+V  YN II+QLC ++  +EEA Q++D M+S+ V PD  +Y+ +   HC  
Sbjct: 311  KMRRYNLLPNVFTYNCIIKQLCKNEH-VEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDH 369

Query: 534  GQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNY 355
             ++  A +L  +M +D        YNM+++  IR  +F++    WE++  K    +VS Y
Sbjct: 370  CEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTY 429

Query: 354  CAMIHELL-KLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMK 178
              MIH    K G   EA  +F  MI + IPPYV T + + + L+ L   + + I   +M+
Sbjct: 430  SVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNRLLGLGFIDHIEILAAKMR 489

Query: 177  RSMSSDIQDLSRYFVPAR 124
            +S S  IQ+L+   +  R
Sbjct: 490  QSTSYAIQELANIMIGNR 507



 Score = 57.0 bits (136), Expect = 1e-05
 Identities = 51/224 (22%), Positives = 94/224 (41%)
 Frame = -3

Query: 852 DLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRSDRYGFTPSVTAY 673
           D L EM + +H  +      +   +  +  A  +A     A+R+  R D +G  P++   
Sbjct: 132 DFLTEMRESHHYEI------NSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTIHDL 185

Query: 672 NAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQLRIASKLFDKML 493
           + ++  LC  +  +++A+Q+     ++  L   +TYS LI    + G    A  LF  ML
Sbjct: 186 DKLLFILCKRKH-VKQAQQLFHQAKNRFSLTA-KTYSILISGWGEIGDSEKACDLFQAML 243

Query: 492 EDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYCAMIHELLKLGWTH 313
           E   P     YN L++A  +  + + A   + D+ +K +  +   Y   IH         
Sbjct: 244 EQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQ 303

Query: 312 EAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRM 181
            A    ++M +  + P V+T   ++  L K +     Y   D M
Sbjct: 304 SAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEM 347


>ref|XP_004235996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Solanum lycopersicum]
          Length = 550

 Score =  149 bits (377), Expect = 1e-33
 Identities = 83/251 (33%), Positives = 136/251 (54%), Gaps = 1/251 (0%)
 Frame = -3

Query: 894  LEAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLI 715
            L AYN++L  LCK   +DE +  + +M + G  PD  +Y+  I   C    +    R L 
Sbjct: 277  LLAYNSILDSLCKAGKMDEAFNFFMKMRSIGLIPDAFSYSIFIHGYCAGNDIHSVFRVLD 336

Query: 714  RSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQF 535
            +  RY   P+V  YN II++LC ++  ++EA Q++D M+++ V PD  +Y+ ++ SHC  
Sbjct: 337  QMRRYKLVPNVFTYNCIIKKLCKTKK-VDEAYQLIDEMINEGVRPDCWSYNTILASHCDQ 395

Query: 534  GQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNY 355
             ++ +A +L  +M ++        YNML++  IR  +F+R    W+ +E +    +VS Y
Sbjct: 396  NEVNLAHRLVSRMEQNNCLPDKHTYNMLLKMLIRVGRFDRVEKVWKSMEGRNFYPSVSTY 455

Query: 354  CAMIHELL-KLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMK 178
              M+H    K G   EA  +F  MI + IPPY  TC+ + + L+         I  D+M+
Sbjct: 456  AVMVHGFCQKKGKLEEACKYFEMMIDEGIPPYTETCEKLRNRLIGHGFAEQTEILADKME 515

Query: 177  RSMSSDIQDLS 145
            RS SS IQ+L+
Sbjct: 516  RSTSSLIQELA 526



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 43/184 (23%), Positives = 81/184 (44%)
 Frame = -3

Query: 732 AVRTLIRSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLI 553
           A+R   +   +G  P +   + ++  LC  +   ++A++  D +   D +P  +TYS LI
Sbjct: 192 AIRAFNKMVDFGIKPCLADLDKLLLALCKRKHA-KQAQEFFDKV-KDDFMPSVKTYSILI 249

Query: 552 CSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLV 373
                 G++  A KLFD+MLE         YN ++ +  +  K + A  ++  + + GL+
Sbjct: 250 RGWGDLGEVAEAQKLFDEMLERGCSVDLLAYNSILDSLCKAGKMDEAFNFFMKMRSIGLI 309

Query: 372 KNVSNYCAMIHELLKLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIF 193
            +  +Y   IH        H      ++M +  + P V+T   ++  L K    +  Y  
Sbjct: 310 PDAFSYSIFIHGYCAGNDIHSVFRVLDQMRRYKLVPNVFTYNCIIKKLCKTKKVDEAYQL 369

Query: 192 HDRM 181
            D M
Sbjct: 370 IDEM 373


>gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis]
          Length = 529

 Score =  148 bits (373), Expect = 3e-33
 Identities = 87/249 (34%), Positives = 131/249 (52%), Gaps = 1/249 (0%)
 Frame = -3

Query: 888  AYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLIRS 709
            AYN+ L  LCK    DE Y+++  M   G  PD  TY+  I   CEA  +    R L R 
Sbjct: 261  AYNSYLEALCKGGSADEAYEIFRGMKEKGVSPDACTYSVFIRTYCEANDIHSVFRVLDRM 320

Query: 708  DRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQFGQ 529
             RY   P+V  YN II++LC   + ++EA Q+++ M+   V PD  +Y+ ++  HC   +
Sbjct: 321  RRYDLLPNVFTYNLIIKKLC-KNEKVDEAYQLLEEMIENGVRPDSWSYNAILAFHCDHCE 379

Query: 528  LRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNYCA 349
            +  A +L  +M +D  P  H  YNM+++  I   +F+R    WE++  KG   +VS Y  
Sbjct: 380  VHRALRLLSRMEKDCKPDRH-TYNMVLKLLIGIGRFDRMTEVWENMAVKGFYPSVSTYAV 438

Query: 348  MIHELL-KLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMKRS 172
            MIH L  K G   EA  +F  MI + IPPY  T + + + L+ L     + I   +M+RS
Sbjct: 439  MIHGLCKKKGKLEEACKYFETMIDEGIPPYSTTVEMLRNRLLGLGLLEHIDIIARKMERS 498

Query: 171  MSSDIQDLS 145
             S  IQ+ +
Sbjct: 499  TSCLIQEFA 507


>ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g52640, mitochondrial; Flags: Precursor
            gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535
            DUF domains [Arabidopsis thaliana]
            gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis
            thaliana] gi|62320530|dbj|BAD95108.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|332194712|gb|AEE32833.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  147 bits (370), Expect = 7e-33
 Identities = 88/263 (33%), Positives = 138/263 (52%), Gaps = 1/263 (0%)
 Frame = -3

Query: 894  LEAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLI 715
            L AYNA+L  LCK   +D  YK++ EM   G KPD  ++   I A C+A  +  A + L 
Sbjct: 243  LLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLD 302

Query: 714  RSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQF 535
            R  RY   P+V  +N II+ LC   + +++A  ++D M+ K   PD  TY+ ++  HC  
Sbjct: 303  RMKRYDLVPNVYTFNHIIKTLC-KNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDH 361

Query: 534  GQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNY 355
             ++  A+KL  +M   +       YNM+++  IR  +F+RA   WE +  +     V+ Y
Sbjct: 362  CEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATY 421

Query: 354  CAMIHELL-KLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMK 178
              MIH L+ K G   EA  +F  MI + IPPY  T + + + LV     + + +   +M+
Sbjct: 422  TVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKME 481

Query: 177  RSMSSDIQDLSRYFVPARDRRFR 109
            RS S  +QD++   V  R +R R
Sbjct: 482  RSSSCSVQDMA---VEMRGKRRR 501



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 42/184 (22%), Positives = 75/184 (40%)
 Frame = -3

Query: 732 AVRTLIRSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLI 553
           A R   R   +G  P V   + ++  LC  +  +  A++         ++P  +TYS L+
Sbjct: 157 ACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKH-VNHAQEFFGKAKGFGIVPSAKTYSILV 215

Query: 552 CSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLV 373
               +      A K+FD+MLE         YN L+ A  +    +     ++++   GL 
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275

Query: 372 KNVSNYCAMIHELLKLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIF 193
            +  ++   IH     G  H A    + M +  + P VYT   ++  L K +  +  Y+ 
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335

Query: 192 HDRM 181
            D M
Sbjct: 336 LDEM 339


>ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Glycine max]
          Length = 523

 Score =  146 bits (369), Expect = 9e-33
 Identities = 85/258 (32%), Positives = 141/258 (54%), Gaps = 1/258 (0%)
 Frame = -3

Query: 894  LEAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLI 715
            L AYN +L  LCK   +DE   ++H+M++   +PD  TY+  I + C+A  ++ A+R L 
Sbjct: 251  LLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLD 310

Query: 714  RSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQF 535
            +  RY   P+V  YN II++LC ++  +EEA  ++D M+S+ V PD  +Y+ +   HC  
Sbjct: 311  KMRRYNILPNVFTYNCIIKRLCKNEH-VEEAYLLLDEMISRGVRPDTWSYNAIQAYHCDH 369

Query: 534  GQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNY 355
             ++  A +L  +M +D        YNM+++  IR  +F++    W ++  K    +VS Y
Sbjct: 370  CEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDKVTKVWGNMGDKKFYPSVSTY 429

Query: 354  CAMIHELL-KLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMK 178
              MIH    K G   EA  +F  MI + IPPYV T + + + L+ L   + + I   +M+
Sbjct: 430  SVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNQLLGLGFLDHIEILAAKMR 489

Query: 177  RSMSSDIQDLSRYFVPAR 124
            +S S  IQ+L+   +  R
Sbjct: 490  QSTSYAIQELANIMIGNR 507



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 46/184 (25%), Positives = 84/184 (45%)
 Frame = -3

Query: 732 AVRTLIRSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLI 553
           A+R+  R D +G  P++  ++ ++  LC ++  +++A+Q  D   ++ +L   +TYS LI
Sbjct: 166 AIRSFNRMDEFGIKPTINDFDKLLFILCKTKH-VKQAQQFFDQAKNRFLLTA-KTYSILI 223

Query: 552 CSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLV 373
                 G    A +LF  MLE   P     YN L++A  +    + A   + D+ +K + 
Sbjct: 224 SGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVE 283

Query: 372 KNVSNYCAMIHELLKLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIF 193
            +   Y   IH          A+   ++M +  I P V+T   ++  L K +     Y+ 
Sbjct: 284 PDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLL 343

Query: 192 HDRM 181
            D M
Sbjct: 344 LDEM 347


>ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297340234|gb|EFH70651.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 525

 Score =  144 bits (362), Expect = 6e-32
 Identities = 85/263 (32%), Positives = 137/263 (52%), Gaps = 1/263 (0%)
 Frame = -3

Query: 894  LEAYNAMLAVLCKPDLLDEMYKLYHEMMADGPKPDGSTYTALILALCEAKKLKVAVRTLI 715
            L AYNA+L  LCK   +D  YK++ EM   G KPD  ++   I + C+A  +  A + L 
Sbjct: 243  LLAYNALLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLD 302

Query: 714  RSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLICSHCQF 535
            R  RY   P+V  +N II+ LC   + +++A  ++D M+ K   PD  TY+ ++  HC  
Sbjct: 303  RMKRYDLVPNVYTFNHIIKTLC-KNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDH 361

Query: 534  GQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLVKNVSNY 355
             ++  A+KL  +M   +       YNM+++  IR  +F+R    WE +  +     V+ Y
Sbjct: 362  CEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMSERKFYPTVATY 421

Query: 354  CAMIHELL-KLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIFHDRMK 178
              MIH L+ K G   EA  +F  MI + IPPY  T + + + LV     + + +   +M+
Sbjct: 422  TVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKME 481

Query: 177  RSMSSDIQDLSRYFVPARDRRFR 109
            RS S  ++D++   V  R +R R
Sbjct: 482  RSSSCSVRDMA---VEMRGKRRR 501



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 43/184 (23%), Positives = 77/184 (41%)
 Frame = -3

Query: 732 AVRTLIRSDRYGFTPSVTAYNAIIEQLCTSQDTLEEARQIMDSMLSKDVLPDFRTYSHLI 553
           A R   R   +G  P V   + ++  LC  +  +  A++  D      ++P  +TYS L+
Sbjct: 157 ASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKH-VNHAQEFFDKAKGFGIVPSAKTYSILV 215

Query: 552 CSHCQFGQLRIASKLFDKMLEDEIPTSHKLYNMLIRASIRELKFERALYYWEDIEAKGLV 373
               +      A K+FD+MLE+        YN L+ A  +    + A   ++++   GL 
Sbjct: 216 RGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGLK 275

Query: 372 KNVSNYCAMIHELLKLGWTHEAVHFFNEMIKKAIPPYVYTCKFMMHCLVKLDDQNAMYIF 193
            +  ++   IH        H A    + M +  + P VYT   ++  L K +  +  Y+ 
Sbjct: 276 PDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335

Query: 192 HDRM 181
            D M
Sbjct: 336 LDEM 339