BLASTX nr result
ID: Ephedra25_contig00023337
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00023337
(553 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004288975.1| PREDICTED: RNA polymerase-associated protein... 44 8e-09
ref|XP_001605583.1| PREDICTED: RNA polymerase-associated protein... 60 3e-07
ref|XP_002974350.1| hypothetical protein SELMODRAFT_149863 [Sela... 59 8e-07
ref|XP_002990841.1| hypothetical protein SELMODRAFT_161156 [Sela... 59 8e-07
gb|EMT08324.1| RNA polymerase-associated CTR9-like protein [Aegi... 57 2e-06
dbj|BAC16228.1| putative TPR-containing nuclear phosphoprotein [... 56 5e-06
gb|EEE67152.1| hypothetical protein OsJ_24219 [Oryza sativa Japo... 56 5e-06
gb|EEC82015.1| hypothetical protein OsI_25970 [Oryza sativa Indi... 56 5e-06
ref|XP_003725617.1| PREDICTED: RNA polymerase-associated protein... 56 7e-06
ref|XP_002448364.1| hypothetical protein SORBIDRAFT_06g025910 [S... 56 7e-06
ref|XP_799094.3| PREDICTED: RNA polymerase-associated protein CT... 56 7e-06
emb|CDJ09846.1| TPR repeat containing protein YDR161W [Hymenolep... 55 9e-06
ref|XP_001944071.1| PREDICTED: RNA polymerase-associated protein... 55 9e-06
>ref|XP_004288975.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Fragaria
vesca subsp. vesca]
Length = 899
Score = 44.3 bits (103), Expect(2) = 8e-09
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 28 LKDGVEKFLKACNIYT*SFMALSNLADHNFYKGQYPIVETLSEAALSSTQN 180
++ G+EK +A +Y MAL+ LA+H FY GQ+ +VE L+E AL+ T +
Sbjct: 250 IRKGMEKMQRAFELYPYCAMALNYLANHFFYTGQHFLVEQLTETALAVTNH 300
Score = 41.2 bits (95), Expect(2) = 8e-09
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +2
Query: 194 HSCYNLARAYHSSGDMAKAREPYSQTIKEVPPEAIQVFLMAYHA-----LRQIH 340
HS YNLAR+YHS GD KA Y ++KE+ Q F+ Y+ L Q+H
Sbjct: 306 HSYYNLARSYHSKGDYDKAGVYYMASVKEISKP--QEFIFPYYVNLARLLEQLH 357
>ref|XP_001605583.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Nasonia
vitripennis]
Length = 1215
Score = 60.5 bits (145), Expect = 3e-07
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Frame = +1
Query: 4 QKSQSMIILKDGVEKFLKACNIYT*SFMALSNLADHNFYKGQYPIVETLSEAALSSTQNP 183
Q S+ +KDG++ F A NI + M L++LA+H F+K Y + L+ A +T+N
Sbjct: 252 QNSEYENSIKDGIQMFATAYNIDQTNPMVLNHLANHYFFKKDYKTTQRLALHAFHNTENE 311
Query: 184 *IRALLLQSCKGLSQLWRYGKGKRTVFANNQGSTTRSNPSF---SHGISCAQADSFT*RE 354
+RA +SC L++ ++ F +T ++P F +G+
Sbjct: 312 SMRA---ESCYQLARSFQVQGDYDQAFQYYYQATQFASPVFVLPHYGLGQMYIYRGDNEN 368
Query: 355 CFECFSKILETEPNDVLAMKCIGYAYT-----PKGDIGKAVVSKI 474
+CF K+L+ +PN+ MK +G Y K D+ K + K+
Sbjct: 369 AAQCFEKVLKAQPNNYETMKILGSLYANSVTQSKRDMAKTFLQKV 413
>ref|XP_002974350.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii]
gi|300157948|gb|EFJ24572.1| hypothetical protein
SELMODRAFT_149863 [Selaginella moellendorffii]
Length = 1041
Score = 58.9 bits (141), Expect = 8e-07
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Frame = +1
Query: 28 LKDGVEKFLKACNIYT*SFMALSNLADHNFYKGQYPIVETLSEAALSSTQNP*IRALLLQ 207
+++G +K L+A IY AL++LA+H FY Q+ +VE L E AL+ST N I++ Q
Sbjct: 248 VQEGTKKMLEAFEIYPYCATALNHLANHYFYTEQHGVVEQLMETALASTDNALIKS---Q 304
Query: 208 SCKGLSQLWRYGKG---KRTVFANNQGSTTRSNPSF---SHGISCAQADSFT*RECFECF 369
S L++ + + KG K + +S F +G+ Q + F
Sbjct: 305 SYFNLARSY-HSKGDYDKAAAYYRASVQELKSPKDFILPYYGLGQVQLKLNDLKSALSNF 363
Query: 370 SKILETEPNDVLAMKCIGYAYTPKGDIGKAVVS 468
K+L+ P + +K +GY + +G KA+ S
Sbjct: 364 EKVLDVHPENCETLKVVGYIHLQQGRNDKALES 396
>ref|XP_002990841.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii]
gi|300141402|gb|EFJ08114.1| hypothetical protein
SELMODRAFT_161156 [Selaginella moellendorffii]
Length = 973
Score = 58.9 bits (141), Expect = 8e-07
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Frame = +1
Query: 28 LKDGVEKFLKACNIYT*SFMALSNLADHNFYKGQYPIVETLSEAALSSTQNP*IRALLLQ 207
+++G +K L+A IY AL++LA+H FY Q+ +VE L E AL+ST N I++ Q
Sbjct: 221 VQEGTKKMLEAFEIYPYCATALNHLANHYFYTEQHGVVEQLMETALASTDNALIKS---Q 277
Query: 208 SCKGLSQLWRYGKG---KRTVFANNQGSTTRSNPSF---SHGISCAQADSFT*RECFECF 369
S L++ + + KG K + +S F +G+ Q + F
Sbjct: 278 SYFNLARSY-HSKGDYDKAAAYYRASVQELKSPKDFILPYYGLGQVQLKLNDLKSALSNF 336
Query: 370 SKILETEPNDVLAMKCIGYAYTPKGDIGKAVVS 468
K+L+ P + +K +GY + +G KA+ S
Sbjct: 337 EKVLDVHPENCETLKVVGYIHLQQGRNDKALES 369
>gb|EMT08324.1| RNA polymerase-associated CTR9-like protein [Aegilops tauschii]
Length = 1159
Score = 57.4 bits (137), Expect = 2e-06
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Frame = +1
Query: 28 LKDGVEKFLKACNIYT*SFMALSNLADHNFYKGQYPIVETLSEAALSSTQNP*IRALLLQ 207
++ G+EK +A IY +AL++LA+H F+ GQ+ +VE LSE ALSS+ + +++ Q
Sbjct: 233 IRSGMEKMRRAFEIYPYCTLALNHLANHYFFTGQHFVVEQLSETALSSSSHGLLKS---Q 289
Query: 208 SCKGLSQLWRYGKGKRTVFANNQGSTTRSNPSFSH-----GISCAQADSFT*RECFECFS 372
S L++ + T S N G+ Q + F
Sbjct: 290 SYYNLARSYHSKGDFETAGRYYMASVKEVNKPQDFVLPFVGLGQIQLKFGDFKRSLASFE 349
Query: 373 KILETEPNDVLAMKCIGYAYTPKGDIGKAV 462
K+LE P + ++K IG Y G+ KA+
Sbjct: 350 KVLEVHPENCESLKAIGNIYANLGENDKAI 379
>dbj|BAC16228.1| putative TPR-containing nuclear phosphoprotein [Oryza sativa
Japonica Group]
Length = 1069
Score = 56.2 bits (134), Expect = 5e-06
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +1
Query: 28 LKDGVEKFLKACNIYT*SFMALSNLADHNFYKGQYPIVETLSEAALSSTQNP*IRA---- 195
++ G+EK +A IY +AL++LA+H F+ GQ+ +VE L+E ALSS+ + +++
Sbjct: 260 IRRGMEKMRRAFEIYPYCTLALNHLANHYFFTGQHFVVEQLTETALSSSNHGLLKSHAFY 319
Query: 196 LLLQSCKGLSQLWRYGKGKRTVFANNQGSTTRSNPSFSHGISCAQADSFT*RECFECFSK 375
L +S + G+ + + N+ S + G+ Q + F K
Sbjct: 320 NLARSYHSKGDI--ETAGRYYMASVNEISKPQDFVLPFFGLGQIQLKFADYKSSLASFEK 377
Query: 376 ILETEPNDVLAMKCIGYAYTPKGDIGKAV 462
+LE P + ++K IG+ Y G+ KA+
Sbjct: 378 VLEVHPENCESLKAIGHIYAKSGENDKAI 406
>gb|EEE67152.1| hypothetical protein OsJ_24219 [Oryza sativa Japonica Group]
Length = 1053
Score = 56.2 bits (134), Expect = 5e-06
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +1
Query: 28 LKDGVEKFLKACNIYT*SFMALSNLADHNFYKGQYPIVETLSEAALSSTQNP*IRA---- 195
++ G+EK +A IY +AL++LA+H F+ GQ+ +VE L+E ALSS+ + +++
Sbjct: 221 IRRGMEKMRRAFEIYPYCTLALNHLANHYFFTGQHFVVEQLTETALSSSNHGLLKSHAFY 280
Query: 196 LLLQSCKGLSQLWRYGKGKRTVFANNQGSTTRSNPSFSHGISCAQADSFT*RECFECFSK 375
L +S + G+ + + N+ S + G+ Q + F K
Sbjct: 281 NLARSYHSKGDI--ETAGRYYMASVNEISKPQDFVLPFFGLGQIQLKFADYKSSLASFEK 338
Query: 376 ILETEPNDVLAMKCIGYAYTPKGDIGKAV 462
+LE P + ++K IG+ Y G+ KA+
Sbjct: 339 VLEVHPENCESLKAIGHIYAKSGENDKAI 367
>gb|EEC82015.1| hypothetical protein OsI_25970 [Oryza sativa Indica Group]
Length = 1174
Score = 56.2 bits (134), Expect = 5e-06
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +1
Query: 28 LKDGVEKFLKACNIYT*SFMALSNLADHNFYKGQYPIVETLSEAALSSTQNP*IRA---- 195
++ G+EK +A IY +AL++LA+H F+ GQ+ +VE L+E ALSS+ + +++
Sbjct: 342 IRRGMEKMRRAFEIYPYCTLALNHLANHYFFTGQHFVVEQLTETALSSSNHGLLKSHAFY 401
Query: 196 LLLQSCKGLSQLWRYGKGKRTVFANNQGSTTRSNPSFSHGISCAQADSFT*RECFECFSK 375
L +S + G+ + + N+ S + G+ Q + F K
Sbjct: 402 NLARSYHSKGDI--ETAGRYYMASVNEISKPQDFVLPFFGLGQIQLKFADYKSSLASFEK 459
Query: 376 ILETEPNDVLAMKCIGYAYTPKGDIGKAV 462
+LE P + ++K IG+ Y G+ KA+
Sbjct: 460 VLEVHPENCESLKAIGHIYAKSGENDKAI 488
>ref|XP_003725617.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 1
[Strongylocentrotus purpuratus]
Length = 1120
Score = 55.8 bits (133), Expect = 7e-06
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Frame = +1
Query: 28 LKDGVEKFLKACNIYT*SFMALSNLADHNFYKGQYPIVETLSEAALSSTQNP*IRALLLQ 207
+K GV+ +A I + + M L++LA+H F+K Y V+ L+ AL T+N I+A +
Sbjct: 255 IKKGVQLLSRAYTIDSGNPMVLNHLANHFFFKKDYTKVQHLALHALHGTENEAIQA---E 311
Query: 208 SCKGLSQLWRYGKGKRTVFANNQGSTTRSNPSF---SHGISCAQADSFT*RECFECFSKI 378
SC L++ + F +TT + P+F G+ +CF K+
Sbjct: 312 SCYQLARSFHVQGDYDQAFQYYYQATTYATPNFVLPHFGLGQMYIHRRDTENASQCFEKV 371
Query: 379 LETEPNDVLAMKCIGYAYTPKGDIGKAVVSK 471
L+ +P + MK +G Y+ D K ++K
Sbjct: 372 LKAQPGNYETMKILGSLYSNSKDEEKRDIAK 402
>ref|XP_002448364.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor]
gi|241939547|gb|EES12692.1| hypothetical protein
SORBIDRAFT_06g025910 [Sorghum bicolor]
Length = 1069
Score = 55.8 bits (133), Expect = 7e-06
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Frame = +1
Query: 28 LKDGVEKFLKACNIYT*SFMALSNLADHNFYKGQYPIVETLSEAALSSTQNP*IRALLLQ 207
++ G+EK KA IY +AL++LA+H F+ GQ+ +VE L+E ALSS+ + +LL+
Sbjct: 260 IRSGMEKMKKAFEIYPYYTLALNHLANHYFFTGQHFVVEQLTETALSSSNH-----VLLK 314
Query: 208 SCKGLSQLWRYGK-------GKRTVFANNQGSTTRSNPSFSHGISCAQADSFT*RECFEC 366
S + Y G+ + + N+ S + G+ Q +
Sbjct: 315 SHAYYNLARSYHSKGDIETAGRYYMASVNEISKPQDFVLPYIGLGQIQLKFGDLKSSLGS 374
Query: 367 FSKILETEPNDVLAMKCIGYAYTPKGDIGKAV 462
F K+LE P + ++K IG+ + G+ KA+
Sbjct: 375 FEKVLEVHPENCESLKAIGHIHAKSGETEKAI 406
>ref|XP_799094.3| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 2
[Strongylocentrotus purpuratus]
Length = 1120
Score = 55.8 bits (133), Expect = 7e-06
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Frame = +1
Query: 28 LKDGVEKFLKACNIYT*SFMALSNLADHNFYKGQYPIVETLSEAALSSTQNP*IRALLLQ 207
+K GV+ +A I + + M L++LA+H F+K Y V+ L+ AL T+N I+A +
Sbjct: 255 IKKGVQLLSRAYTIDSGNPMVLNHLANHFFFKKDYTKVQHLALHALHGTENEAIQA---E 311
Query: 208 SCKGLSQLWRYGKGKRTVFANNQGSTTRSNPSF---SHGISCAQADSFT*RECFECFSKI 378
SC L++ + F +TT + P+F G+ +CF K+
Sbjct: 312 SCYQLARSFHVQGDYDQAFQYYYQATTYATPNFVLPHFGLGQMYIHRRDTENASQCFEKV 371
Query: 379 LETEPNDVLAMKCIGYAYTPKGDIGKAVVSK 471
L+ +P + MK +G Y+ D K ++K
Sbjct: 372 LKAQPGNYETMKILGSLYSNSKDEEKRDIAK 402
>emb|CDJ09846.1| TPR repeat containing protein YDR161W [Hymenolepis microstoma]
Length = 1186
Score = 55.5 bits (132), Expect = 9e-06
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Frame = +1
Query: 4 QKSQSMIILKDGVEKFLKACNIYT*SFMALSNLADHNFYKGQYPIVETLSEAALSSTQNP 183
+K+Q I K GV+K +A NI + + M L++LADH FYK +Y V L+ A T+N
Sbjct: 264 EKTQESI--KQGVQKLSRAYNIDSTNPMVLNHLADHFFYKKEYEKVHKLATHAFHGTENE 321
Query: 184 *IRALLLQSCKGLSQLWRYGKGKRTVFANNQGSTTRSNPSF---SHGISCAQADSFT*RE 354
+RA +SC +++ + + F +T ++P+F +G+
Sbjct: 322 AMRA---ESCYQMARAFHVQENYDKAFQYYYLATQFASPNFLLPFYGLGQMYLHRKDLEH 378
Query: 355 CFECFSKILETEPNDVLAMKCIGYAYTPKGDIGKAVVSK 471
F K+L+ P + +K +G Y + K +K
Sbjct: 379 AAIAFEKVLKVYPKNYETLKILGSLYAQSNKLDKQAQAK 417
>ref|XP_001944071.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
[Acyrthosiphon pisum]
Length = 1173
Score = 55.5 bits (132), Expect = 9e-06
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 8/156 (5%)
Frame = +1
Query: 28 LKDGVEKFLKACNIYT*SFMALSNLADHNFYKGQYPIVETLSEAALSSTQNP*IRALLLQ 207
+K GV KA I T + M L++L++H FYK Y E L+ AL +T+N +RA +
Sbjct: 250 IKLGVNMLSKAYTIDTTNPMVLNHLSNHFFYKKDYAKSELLARRALQNTENDAMRA---E 306
Query: 208 SCKGLSQLWRYGKGKRTVFANNQGSTTRSNPSF---SHGISCAQADSFT*RECFECFSKI 378
SC +++++ F +T + +F G+ +CF K+
Sbjct: 307 SCYHMARVFHVQNNYDQAFQYYYQATQFAPVTFVLPYFGLGQMYIYGGDKENAAQCFEKV 366
Query: 379 LETEPNDVLAMKCIGYAYT-----PKGDIGKAVVSK 471
L+ P + AMK +G YT K DI K+ + K
Sbjct: 367 LKAHPENYEAMKILGSLYTKSKSQQKRDIAKSYLKK 402