BLASTX nr result
ID: Ephedra25_contig00023319
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00023319
(774 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16520.1| unknown [Picea sitchensis] 148 2e-33
gb|AFG45722.1| hypothetical protein 0_12933_01, partial [Pinus t... 127 4e-27
gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis] 127 6e-27
gb|AFG45724.1| hypothetical protein 0_12933_01, partial [Pinus t... 127 6e-27
ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat... 125 1e-26
ref|XP_003635652.1| PREDICTED: pentatricopeptide repeat-containi... 125 1e-26
emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera] 125 1e-26
gb|AFG45721.1| hypothetical protein 0_12933_01, partial [Pinus t... 125 2e-26
gb|AFG45720.1| hypothetical protein 0_12933_01, partial [Pinus t... 125 2e-26
ref|XP_002525227.1| pentatricopeptide repeat-containing protein,... 125 2e-26
ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat... 125 2e-26
ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258... 125 2e-26
gb|AEW07845.1| hypothetical protein 0_12933_01, partial [Pinus r... 124 4e-26
gb|AFG45729.1| hypothetical protein 0_12933_01, partial [Pinus t... 124 5e-26
ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containi... 124 5e-26
ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat... 123 6e-26
ref|XP_006350965.1| PREDICTED: pentatricopeptide repeat-containi... 123 8e-26
gb|EOY29048.1| Tetratricopeptide repeat-like superfamily protein... 123 8e-26
ref|XP_002526753.1| pentatricopeptide repeat-containing protein,... 122 1e-25
ref|XP_002983523.1| hypothetical protein SELMODRAFT_118230 [Sela... 122 2e-25
>gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 148 bits (374), Expect = 2e-33
Identities = 86/222 (38%), Positives = 129/222 (58%), Gaps = 4/222 (1%)
Frame = -1
Query: 654 MKHRITQLRTLTGTRRVFSAIWEEEEEHAIKSLCESGRIKDAIGLLQRIVS----PKTSA 487
+K R L+T GT + + +KSLC+ GR+++A+ +LQ +V P +S
Sbjct: 15 IKARTNTLKTKEGTGK--------GNDGLVKSLCKQGRLREALHILQDMVENGIWPHSST 66
Query: 486 YILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEKVLANKLINMYGRCGSLNDARHVFDE 307
Y LLQ C + ++L + + LHA +I + L NKL+++Y + GSL +AR VFDE
Sbjct: 67 YDSLLQGCLNAKSLPDAKLLHAHMIQT-QFECQDISLGNKLVSIYVKLGSLVEARRVFDE 125
Query: 306 MPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIATLLPAAAKIXXXXXX 127
MP K+VVSWTA+++ H+ +EAL F M G+QPNHFT A++LPA +
Sbjct: 126 MPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDL---EVL 182
Query: 126 XXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFARHVFDKM 1
+ +K ++FVGN L+DMY+K +EFAR +FDKM
Sbjct: 183 GEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKM 224
Score = 81.3 bits (199), Expect = 3e-13
Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 1/185 (0%)
Frame = -1
Query: 552 ESGRIKDAIGLLQRIVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEKVLA 373
+ G +++A+ L +++ ++ ++ ++ E L QI+ P V++
Sbjct: 272 QCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLF-QIM------PERNVIS 324
Query: 372 -NKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSGV 196
N +I+ + + G + +A +F MP +VVSW A+++ + AE AL +F +M +
Sbjct: 325 WNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDM 384
Query: 195 QPNHFTIATLLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFARH 16
+PN T A +LPA A + I+ D+ VGN L+ MY+KC +E AR
Sbjct: 385 KPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARK 444
Query: 15 VFDKM 1
VFD+M
Sbjct: 445 VFDRM 449
Score = 77.8 bits (190), Expect = 4e-12
Identities = 41/141 (29%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
Frame = -1
Query: 567 IKSLCESGRIKDAIGLLQRI----VSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLS 400
I ++G+ ++A+ L ++ + P T + ++L +C + L +G H +I S
Sbjct: 360 IAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIR--S 417
Query: 399 GRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIF 220
G + ++ N L+ MY +CGS+ DAR VFD M +D S +A++ + C++E+L +F
Sbjct: 418 GFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELF 477
Query: 219 RRMLHSGVQPNHFTIATLLPA 157
+M +G++P+ T +L A
Sbjct: 478 EQMQFTGLKPDRVTFVGVLSA 498
>gb|AFG45722.1| hypothetical protein 0_12933_01, partial [Pinus taeda]
Length = 147
Score = 127 bits (319), Expect = 4e-27
Identities = 65/145 (44%), Positives = 89/145 (61%), Gaps = 1/145 (0%)
Frame = -1
Query: 588 EEEEEHAIKSLCESGRIKDAIGLLQRIVSP-KTSAYILLLQSCNSKRALSEGRSLHAQII 412
++ H IK+LC+ G++KDA+ LQ+ P K S Y LLQSC K AL EG+ +HA I
Sbjct: 5 DDTSNHVIKNLCKQGQLKDAVHALQQTSIPVKPSTYAYLLQSCTKKNALPEGKLIHAHI- 63
Query: 411 ANLSGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEA 232
N + L N LI MY RCG+L DAR +FD MP +D SW +++ H AEEA
Sbjct: 64 -NERAPATDTFLHNSLIMMYVRCGNLTDARKLFDRMPERDDFSWNVMIAAYTKHGIAEEA 122
Query: 231 LVIFRRMLHSGVQPNHFTIATLLPA 157
L +F +M +G++PN FT ++LPA
Sbjct: 123 LRMFYQMQRTGIEPNSFTFVSVLPA 147
>gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis]
Length = 750
Score = 127 bits (318), Expect = 6e-27
Identities = 66/160 (41%), Positives = 97/160 (60%)
Frame = -1
Query: 486 YILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEKVLANKLINMYGRCGSLNDARHVFDE 307
Y LL+ C R L EG+ +HA + N R + V+ N ++NMY +CGSL DAR +FDE
Sbjct: 79 YNRLLKRCTEMRKLREGKMVHAHFL-NSQFRD-DPVIGNTILNMYAKCGSLADARKLFDE 136
Query: 306 MPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIATLLPAAAKIXXXXXX 127
MP KD+V+WTA++S HD AEEAL +F ML G++PN FT+++LL A+
Sbjct: 137 MPLKDIVTWTALISGYSQHDQAEEALALFPLMLRRGLEPNQFTLSSLLKASGDGTTNKRG 196
Query: 126 XXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFARHVFD 7
+K D++VG++L+DMY++ + AR +FD
Sbjct: 197 RQLHAYCLKCGYDSDVYVGSSLVDMYARYGHLVEARLIFD 236
Score = 96.3 bits (238), Expect = 1e-17
Identities = 56/167 (33%), Positives = 85/167 (50%)
Frame = -1
Query: 501 PKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEKVLANKLINMYGRCGSLNDAR 322
P + L +C S +L +G+ +HAQ+I SG + + N L++MY + GS+ DA+
Sbjct: 276 PTHFTFSSLCTACASTGSLEQGKWVHAQVIK--SGGRLVAFVGNTLLDMYAKSGSIEDAK 333
Query: 321 HVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIATLLPAAAKIX 142
VFD + +DVVSW ++L+ E AL +F M +P FT ++L A A
Sbjct: 334 KVFDRLVKRDVVSWNSMLNGYARKGETENALRLFSMMHREDFKPTDFTYSSLCTACASTG 393
Query: 141 XXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFARHVFDKM 1
IK FVGN L+DMY+K +E A+ VFD++
Sbjct: 394 SLEQGKWVHAHVIKSGGRLVAFVGNTLLDMYAKSGSIEDAKKVFDRL 440
Score = 85.5 bits (210), Expect = 2e-14
Identities = 55/174 (31%), Positives = 83/174 (47%)
Frame = -1
Query: 522 LLQRIVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEKVLANKLINMYGRC 343
+L+R + P LL++ GR LHA + G + + + L++MY R
Sbjct: 168 MLRRGLEPNQFTLSSLLKASGDGTTNKRGRQLHAYCLK--CGYDSDVYVGSSLVDMYARY 225
Query: 342 GSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIATLL 163
G L +AR +FD + K+ VSW A+++ E AL +F M +P HFT ++L
Sbjct: 226 GHLVEARLIFDGLVTKNEVSWNALIAGHSRKGETENALRLFSMMHREDFKPTHFTFSSLC 285
Query: 162 PAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFARHVFDKM 1
A A Q IK FVGN L+DMY+K +E A+ VFD++
Sbjct: 286 TACASTGSLEQGKWVHAQVIKSGGRLVAFVGNTLLDMYAKSGSIEDAKKVFDRL 339
Score = 75.5 bits (184), Expect = 2e-11
Identities = 44/167 (26%), Positives = 77/167 (46%)
Frame = -1
Query: 501 PKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEKVLANKLINMYGRCGSLNDAR 322
P Y L +C S +L +G+ +HA +I SG + + N L++MY + GS+ DA+
Sbjct: 377 PTDFTYSSLCTACASTGSLEQGKWVHAHVIK--SGGRLVAFVGNTLLDMYAKSGSIEDAK 434
Query: 321 HVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIATLLPAAAKIX 142
VFD + +DVVSW ++L H + + F M+ SG++P T ++L A +
Sbjct: 435 KVFDRLVKRDVVSWNSMLRGYAQHGLGRKTVQHFEEMMTSGIEPISVTFLSVLTACSHAG 494
Query: 141 XXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFARHVFDKM 1
K V D+ ++D+ + ++ A +M
Sbjct: 495 LLDEGRHYFELMKKYKVEPDVLHYVTMVDLLGRAGLLDQAERYIREM 541
>gb|AFG45724.1| hypothetical protein 0_12933_01, partial [Pinus taeda]
Length = 147
Score = 127 bits (318), Expect = 6e-27
Identities = 65/145 (44%), Positives = 89/145 (61%), Gaps = 1/145 (0%)
Frame = -1
Query: 588 EEEEEHAIKSLCESGRIKDAIGLLQRIVSP-KTSAYILLLQSCNSKRALSEGRSLHAQII 412
++ H IK+LC+ G++KDA+ LQ+ P K S Y LLQSC K AL EG+ +HA I
Sbjct: 5 DDTSNHVIKNLCKQGQLKDAVHALQQTSIPVKPSTYAYLLQSCTKKNALPEGKLIHAHI- 63
Query: 411 ANLSGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEA 232
N + L N LI MY RCG+L DAR +FD MP +D SW +++ H AEEA
Sbjct: 64 -NERAPATDTFLHNSLIIMYVRCGNLTDARKLFDRMPERDDFSWNVMIAAYTKHGIAEEA 122
Query: 231 LVIFRRMLHSGVQPNHFTIATLLPA 157
L +F +M +G++PN FT ++LPA
Sbjct: 123 LRMFYQMQRTGIEPNSFTFVSVLPA 147
>ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 125 bits (315), Expect = 1e-26
Identities = 75/189 (39%), Positives = 106/189 (56%), Gaps = 3/189 (1%)
Frame = -1
Query: 567 IKSLCESGRIKDAI---GLLQRIVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSG 397
+K+LC SG++K+A+ +L R V K Y +L C S+RA+ EG+ +H +I
Sbjct: 65 LKTLCSSGQLKEALLQMAILGREV--KFEGYDTILNECVSQRAIREGQRVHTHMIKTCYL 122
Query: 396 RPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFR 217
V L +LI +Y +C L DAR +FDEMP K+VVSWTA++S A EAL +F
Sbjct: 123 PSV--YLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFV 180
Query: 216 RMLHSGVQPNHFTIATLLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCS 37
ML S +PNHFT AT+L + AIK + +FVG++L+DMY+K
Sbjct: 181 EMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSG 240
Query: 36 RVEFARHVF 10
R+ A VF
Sbjct: 241 RICDAHGVF 249
Score = 88.6 bits (218), Expect = 2e-15
Identities = 53/176 (30%), Positives = 86/176 (48%)
Frame = -1
Query: 528 IGLLQRIVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEKVLANKLINMYG 349
+ +L+ P + +L SC GR +H+ IA + + L++MY
Sbjct: 180 VEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHS--IAIKRNYESHMFVGSSLLDMYA 237
Query: 348 RCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIAT 169
+ G + DA VF +P +DVV+ TAI+S EEAL +FR++ G+ N T A+
Sbjct: 238 KSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYAS 297
Query: 168 LLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFARHVFDKM 1
+L A + + ++ + + + N+LIDMYSKC V +AR +FD M
Sbjct: 298 VLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSM 353
Score = 72.4 bits (176), Expect = 2e-10
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
Frame = -1
Query: 567 IKSLCESGRIKDAIGLLQRI----VSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLS 400
I + G ++A+ L +++ ++ + Y +L + + AL+ G+ +H+ ++ S
Sbjct: 264 ISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLR--S 321
Query: 399 GRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIF 220
G+ VL N LI+MY +CG++ AR +FD MP + +SW A+L H A E L +F
Sbjct: 322 GQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELF 381
Query: 219 RRMLHSG-VQPNHFTIATLLPAAA--KIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMY 49
+ M V+P+ T +L + ++ K + D+ ++D+
Sbjct: 382 KLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLL 441
Query: 48 SKCSRVEFARHVFDKM 1
+ RVE A KM
Sbjct: 442 GRAGRVEEAFDFIKKM 457
>ref|XP_003635652.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like, partial [Vitis vinifera]
Length = 262
Score = 125 bits (315), Expect = 1e-26
Identities = 67/189 (35%), Positives = 110/189 (58%), Gaps = 1/189 (0%)
Frame = -1
Query: 564 KSLCESGRIKDAIGLLQR-IVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPV 388
KS + G A+ L+QR + P + Y LL+ C + +GR +HA ++ +
Sbjct: 63 KSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDS-HFLDN 121
Query: 387 EKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRML 208
VL N ++NMY +CG L+DAR +FDEMP KD+V+WTA+++ ++ +AL++F +ML
Sbjct: 122 HLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQML 181
Query: 207 HSGVQPNHFTIATLLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVE 28
G+QPNHFT+++LL A+ +K ++VG+AL+DMY++C ++
Sbjct: 182 RLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMD 241
Query: 27 FARHVFDKM 1
A+ FD M
Sbjct: 242 AAQLAFDGM 250
>emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 125 bits (315), Expect = 1e-26
Identities = 67/189 (35%), Positives = 110/189 (58%), Gaps = 1/189 (0%)
Frame = -1
Query: 564 KSLCESGRIKDAIGLLQR-IVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPV 388
KS + G A+ L+QR + P + Y LL+ C + +GR +HA ++ +
Sbjct: 63 KSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDS-HFLDN 121
Query: 387 EKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRML 208
VL N ++NMY +CG L+DAR +FDEMP KD+V+WTA+++ ++ +AL++F +ML
Sbjct: 122 HLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQML 181
Query: 207 HSGVQPNHFTIATLLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVE 28
G+QPNHFT+++LL A+ +K ++VG+AL+DMY++C ++
Sbjct: 182 RLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMD 241
Query: 27 FARHVFDKM 1
A+ FD M
Sbjct: 242 AAQLAFDGM 250
Score = 93.2 bits (230), Expect = 9e-17
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 4/193 (2%)
Frame = -1
Query: 567 IKSLCESGRIKDAIGLLQRIV----SPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLS 400
I ++ R +DA+ L +++ P LL++ S+ L G LHA +
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKY-- 218
Query: 399 GRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIF 220
G + + L++MY RCG ++ A+ FD MP K VSW A++S E AL +
Sbjct: 219 GYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLL 278
Query: 219 RRMLHSGVQPNHFTIATLLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKC 40
+M QP HFT +++ A A I IK + F+GN L+DMY+K
Sbjct: 279 WKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKA 338
Query: 39 SRVEFARHVFDKM 1
++ A+ VFD++
Sbjct: 339 GSIDDAKRVFDRL 351
Score = 77.8 bits (190), Expect = 4e-12
Identities = 46/144 (31%), Positives = 73/144 (50%)
Frame = -1
Query: 582 EEEHAIKSLCESGRIKDAIGLLQRIVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANL 403
E EHA+ L + R + P Y + +C S AL +G+ +HA +I
Sbjct: 270 EGEHALHLLWKMQR---------KNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIK-- 318
Query: 402 SGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVI 223
SG + + N L++MY + GS++DA+ VFD + DVVSW +L+ H +E L
Sbjct: 319 SGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDR 378
Query: 222 FRRMLHSGVQPNHFTIATLLPAAA 151
F +ML G++PN + +L A +
Sbjct: 379 FEQMLRIGIEPNEISFLCVLTACS 402
>gb|AFG45721.1| hypothetical protein 0_12933_01, partial [Pinus taeda]
gi|383130011|gb|AFG45726.1| hypothetical protein
0_12933_01, partial [Pinus taeda]
gi|383130015|gb|AFG45730.1| hypothetical protein
0_12933_01, partial [Pinus taeda]
gi|383130016|gb|AFG45731.1| hypothetical protein
0_12933_01, partial [Pinus taeda]
gi|383130017|gb|AFG45732.1| hypothetical protein
0_12933_01, partial [Pinus taeda]
gi|383130019|gb|AFG45734.1| hypothetical protein
0_12933_01, partial [Pinus taeda]
gi|383130020|gb|AFG45735.1| hypothetical protein
0_12933_01, partial [Pinus taeda]
Length = 147
Score = 125 bits (314), Expect = 2e-26
Identities = 65/145 (44%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
Frame = -1
Query: 588 EEEEEHAIKSLCESGRIKDAIGLLQRIVSP-KTSAYILLLQSCNSKRALSEGRSLHAQII 412
++ H IK+LC+ G++KDA+ LQ+ P K S Y LLQSC K AL EG+ +HA I
Sbjct: 5 DDTSNHVIKNLCKQGQLKDAVHALQQTSIPVKPSTYAYLLQSCTKKNALPEGKLIHAHI- 63
Query: 411 ANLSGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEA 232
N + L N LI MY RC +L DAR VFD MP +D SW +++ H AEEA
Sbjct: 64 -NERAPATDTFLHNSLIMMYVRCRNLTDARKVFDRMPERDDFSWNVMIAAYTKHGIAEEA 122
Query: 231 LVIFRRMLHSGVQPNHFTIATLLPA 157
L +F +M +G++PN FT ++LPA
Sbjct: 123 LRMFYQMQRTGIEPNSFTFVSVLPA 147
>gb|AFG45720.1| hypothetical protein 0_12933_01, partial [Pinus taeda]
gi|383130008|gb|AFG45723.1| hypothetical protein
0_12933_01, partial [Pinus taeda]
gi|383130010|gb|AFG45725.1| hypothetical protein
0_12933_01, partial [Pinus taeda]
gi|383130012|gb|AFG45727.1| hypothetical protein
0_12933_01, partial [Pinus taeda]
gi|383130013|gb|AFG45728.1| hypothetical protein
0_12933_01, partial [Pinus taeda]
gi|383130018|gb|AFG45733.1| hypothetical protein
0_12933_01, partial [Pinus taeda]
Length = 147
Score = 125 bits (314), Expect = 2e-26
Identities = 65/145 (44%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
Frame = -1
Query: 588 EEEEEHAIKSLCESGRIKDAIGLLQRIVSP-KTSAYILLLQSCNSKRALSEGRSLHAQII 412
++ H IK+LC+ G++KDA+ LQ+ P K S Y LLQSC K AL EG+ +HA I
Sbjct: 5 DDTSNHVIKNLCKQGQLKDAVHALQQTSIPIKPSTYAYLLQSCTKKNALPEGKLIHAHI- 63
Query: 411 ANLSGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEA 232
N + L N LI MY RC +L DAR VFD MP +D SW +++ H AEEA
Sbjct: 64 -NERAPATDTFLHNSLIMMYVRCRNLTDARKVFDRMPERDDFSWNVMIAAYTKHGIAEEA 122
Query: 231 LVIFRRMLHSGVQPNHFTIATLLPA 157
L +F +M +G++PN FT ++LPA
Sbjct: 123 LRMFYQMQRTGIEPNSFTFVSVLPA 147
>ref|XP_002525227.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535524|gb|EEF37193.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 420
Score = 125 bits (314), Expect = 2e-26
Identities = 69/199 (34%), Positives = 116/199 (58%), Gaps = 1/199 (0%)
Frame = -1
Query: 600 SAIWEEEEEHAIKSLCESGRIKDAIGLLQRI-VSPKTSAYILLLQSCNSKRALSEGRSLH 424
S++ EE++ SL +SG + L+ R + P + Y +L + C L EG+ +H
Sbjct: 45 SSLIIEEKDLLRHSLDQSGTGLHVLDLIDRASLEPDRTLYHILFKKCTLFNKLKEGQLVH 104
Query: 423 AQIIANLSGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDC 244
A ++ + + V+ N ++NMY +CG+L +AR VFD+MP KDVV+WTA+++ HD
Sbjct: 105 AHLLNSRFKHDL--VIQNTILNMYAKCGNLGEARKVFDQMPVKDVVTWTALITGYSQHDR 162
Query: 243 AEEALVIFRRMLHSGVQPNHFTIATLLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNA 64
++AL++F +ML G +PNHFT+++LL A+ IK +++VG+A
Sbjct: 163 PKDALLLFPQMLTLGFRPNHFTLSSLLKASGVSPSDSNGRLLHAFCIKYGYSCNVYVGSA 222
Query: 63 LIDMYSKCSRVEFARHVFD 7
L+DMY++ +E A +FD
Sbjct: 223 LLDMYARSGHLEEALFIFD 241
Score = 85.9 bits (211), Expect = 1e-14
Identities = 60/191 (31%), Positives = 88/191 (46%), Gaps = 4/191 (2%)
Frame = -1
Query: 567 IKSLCESGRIKDAIGLLQRIVS----PKTSAYILLLQSCNSKRALSEGRSLHAQIIANLS 400
I + R KDA+ L ++++ P LL++ + S GR LHA I
Sbjct: 154 ITGYSQHDRPKDALLLFPQMLTLGFRPNHFTLSSLLKASGVSPSDSNGRLLHAFCIKY-- 211
Query: 399 GRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIF 220
G + + L++MY R G L +A +FD +P ++ VSW A+++ E A F
Sbjct: 212 GYSCNVYVGSALLDMYARSGHLEEALFIFDGLPSRNEVSWNALIAGCARKGDQELAFSFF 271
Query: 219 RRMLHSGVQPNHFTIATLLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKC 40
+ML +QP FT + +L A A I IK FVGN L+ MY+K
Sbjct: 272 SKMLRENIQPTQFTYSIVLSACASIGSLEQGKWVHALLIKSGAKLVDFVGNTLLGMYAKS 331
Query: 39 SRVEFARHVFD 7
+E AR VFD
Sbjct: 332 GSIEDARKVFD 342
Score = 85.9 bits (211), Expect = 1e-14
Identities = 46/124 (37%), Positives = 71/124 (57%)
Frame = -1
Query: 522 LLQRIVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEKVLANKLINMYGRC 343
+L+ + P Y ++L +C S +L +G+ +HA +I SG + + N L+ MY +
Sbjct: 274 MLRENIQPTQFTYSIVLSACASIGSLEQGKWVHALLIK--SGAKLVDFVGNTLLGMYAKS 331
Query: 342 GSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIATLL 163
GS+ DAR VFD + +DVVSW ++L+ H AL+IFR+ML GV PN T +L
Sbjct: 332 GSIEDARKVFDGLVKRDVVSWNSMLAGYAQHGLGNIALLIFRQMLIIGVAPNDITFLCVL 391
Query: 162 PAAA 151
A +
Sbjct: 392 TACS 395
>ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Setaria italica]
Length = 608
Score = 125 bits (313), Expect = 2e-26
Identities = 68/187 (36%), Positives = 107/187 (57%)
Frame = -1
Query: 561 SLCESGRIKDAIGLLQRIVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEK 382
++C + R A+ L + + Y + C +RAL EGR +HA+++A +G
Sbjct: 13 AVCLARRSASAVAALPSAGAARFHDYDTAVTECVERRALREGRQVHARMVA--AGYRPAL 70
Query: 381 VLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHS 202
LA +L+ MY RCG+L DAR+V D MP ++VVSWTA++S ++ EA+ +F ML +
Sbjct: 71 YLATRLVIMYARCGALEDARNVLDGMPERNVVSWTAMISGYSQNERPAEAMELFVMMLRA 130
Query: 201 GVQPNHFTIATLLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFA 22
G +PN FT+A++L + A+K + +FVG+AL+DMY+K V+ A
Sbjct: 131 GCEPNEFTLASVLTSCTGSQGIHQVKQVHAFAVKTNFELHMFVGSALLDMYAKSENVQEA 190
Query: 21 RHVFDKM 1
R VFD +
Sbjct: 191 RRVFDML 197
Score = 88.2 bits (217), Expect = 3e-15
Identities = 51/174 (29%), Positives = 91/174 (52%)
Frame = -1
Query: 522 LLQRIVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEKVLANKLINMYGRC 343
+L+ P +L SC + + + + +HA A + + + + L++MY +
Sbjct: 127 MLRAGCEPNEFTLASVLTSCTGSQGIHQVKQVHA--FAVKTNFELHMFVGSALLDMYAKS 184
Query: 342 GSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIATLL 163
++ +AR VFD +P +DVVS+TAI+S EEAL +FR++ + G+Q N T LL
Sbjct: 185 ENVQEARRVFDMLPARDVVSYTAIISGYTQLGLDEEALDLFRQLYNEGMQCNEVTFTALL 244
Query: 162 PAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFARHVFDKM 1
A + + ++ + + + N+LIDMYSKC ++ ++R VF+ M
Sbjct: 245 NALSGLASLDYGKQVHGLILRKELPFFMVLQNSLIDMYSKCGKLLYSRRVFNNM 298
Score = 64.7 bits (156), Expect = 3e-08
Identities = 39/108 (36%), Positives = 56/108 (51%)
Frame = -1
Query: 486 YILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEKVLANKLINMYGRCGSLNDARHVFDE 307
+ LL + + +L G+ +H I+ P VL N LI+MY +CG L +R VF+
Sbjct: 240 FTALLNALSGLASLDYGKQVHGLILRK--ELPFFMVLQNSLIDMYSKCGKLLYSRRVFNN 297
Query: 306 MPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIATLL 163
MP + VVSW AIL H A E +FR M V+P+ T+ +L
Sbjct: 298 MPKRSVVSWNAILMGYGRHGLAHEVAQLFRSM-REEVKPDSVTLLAVL 344
>ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 125 bits (313), Expect = 2e-26
Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 1/189 (0%)
Frame = -1
Query: 564 KSLCESGRIKDAIGLLQR-IVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPV 388
KS + G A+ L+QR + P + Y LL+ C + +GR +HA ++ +
Sbjct: 63 KSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDS-HFLDN 121
Query: 387 EKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRML 208
VL N ++NMY +CG L+DAR +FDEMP KD+V+WTA+++ ++ +AL++F +ML
Sbjct: 122 HLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQML 181
Query: 207 HSGVQPNHFTIATLLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVE 28
G QPNHFT+++LL A+ +K ++VG+AL+DMY++C ++
Sbjct: 182 RLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMD 241
Query: 27 FARHVFDKM 1
A+ FD M
Sbjct: 242 AAQLAFDGM 250
Score = 94.7 bits (234), Expect = 3e-17
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 4/193 (2%)
Frame = -1
Query: 567 IKSLCESGRIKDAIGLLQRIV----SPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLS 400
I ++ R +DA+ L +++ P LL++ S+ L G LHA +
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKY-- 218
Query: 399 GRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIF 220
G + + L++MY RCG ++ A+ FD MP K VSW A++S E AL +
Sbjct: 219 GYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLL 278
Query: 219 RRMLHSGVQPNHFTIATLLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKC 40
+M QP HFT +++L A A I IK + F+GN L+DMY+K
Sbjct: 279 WKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKA 338
Query: 39 SRVEFARHVFDKM 1
++ A+ VFD++
Sbjct: 339 GSIDDAKRVFDRL 351
Score = 79.3 bits (194), Expect = 1e-12
Identities = 47/144 (32%), Positives = 74/144 (51%)
Frame = -1
Query: 582 EEEHAIKSLCESGRIKDAIGLLQRIVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANL 403
E EHA+ L + R + P Y +L +C S AL +G+ +HA +I
Sbjct: 270 EGEHALHLLWKMQR---------KNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIK-- 318
Query: 402 SGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVI 223
SG + + N L++MY + GS++DA+ VFD + DVVSW +L+ H +E L
Sbjct: 319 SGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDR 378
Query: 222 FRRMLHSGVQPNHFTIATLLPAAA 151
F +ML G++PN + +L A +
Sbjct: 379 FEQMLRIGIEPNEISFLCVLTACS 402
>gb|AEW07845.1| hypothetical protein 0_12933_01, partial [Pinus radiata]
Length = 147
Score = 124 bits (311), Expect = 4e-26
Identities = 65/145 (44%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Frame = -1
Query: 588 EEEEEHAIKSLCESGRIKDAIGLLQRIVSP-KTSAYILLLQSCNSKRALSEGRSLHAQII 412
++ H IK+LC G++KDA+ LQ+ P K S Y LLQSC K AL EG+ +HA I
Sbjct: 5 DDTSNHVIKNLCNQGQLKDAVHALQQTSIPVKPSTYAYLLQSCTKKNALPEGKLIHAHI- 63
Query: 411 ANLSGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEA 232
N + L N LI MY RC +L DAR VFD MP +D SW +++ H AEEA
Sbjct: 64 -NERAPAKDTFLHNSLIMMYVRCRNLTDARKVFDRMPERDDFSWNVMIAAYTKHGIAEEA 122
Query: 231 LVIFRRMLHSGVQPNHFTIATLLPA 157
L +F +M +G++PN FT ++LPA
Sbjct: 123 LRMFYQMQRTGIEPNSFTFVSVLPA 147
>gb|AFG45729.1| hypothetical protein 0_12933_01, partial [Pinus taeda]
Length = 147
Score = 124 bits (310), Expect = 5e-26
Identities = 64/145 (44%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Frame = -1
Query: 588 EEEEEHAIKSLCESGRIKDAIGLLQRIVSP-KTSAYILLLQSCNSKRALSEGRSLHAQII 412
++ H IK+LC+ G++KDA+ LQ+ P K S Y LLQSC K AL EG+ +HA I
Sbjct: 5 DDTSNHVIKNLCKQGQLKDAVHALQQTSIPVKPSTYAYLLQSCTKKNALPEGKLIHAHI- 63
Query: 411 ANLSGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEA 232
N + L N LI MY RC +L DAR VFD MP +D SW +++ H AEE
Sbjct: 64 -NERAPATDTFLHNSLIMMYVRCRNLTDARKVFDRMPERDDFSWNVMIAAYTKHGIAEEG 122
Query: 231 LVIFRRMLHSGVQPNHFTIATLLPA 157
L +F +M +G++PN FT ++LPA
Sbjct: 123 LRMFYQMQRTGIEPNSFTFVSVLPA 147
>ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 124 bits (310), Expect = 5e-26
Identities = 62/169 (36%), Positives = 98/169 (57%)
Frame = -1
Query: 507 VSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEKVLANKLINMYGRCGSLND 328
+ P + Y LL+ C L EG+ +H ++ S + V+ N L+ MY RCGSL
Sbjct: 70 LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLN--SNFKHDLVIQNSLLFMYARCGSLEG 127
Query: 327 ARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIATLLPAAAK 148
AR +FDEMPH+D+VSWT++++ +D A +AL++F RML G +PN FT+++L+
Sbjct: 128 ARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGY 187
Query: 147 IXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFARHVFDKM 1
+ K H ++FVG++L+DMY++C + A VFDK+
Sbjct: 188 MASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKL 236
Score = 89.4 bits (220), Expect = 1e-15
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Frame = -1
Query: 627 TLTGTRRVFSAIWEEEE---EHAIKSLCESGRIKDAIGLLQRIVS----PKTSAYILLLQ 469
+L G RR+F + + I ++ R DA+ L R++S P L++
Sbjct: 124 SLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVK 183
Query: 468 SCNSKRALSEGRSLHAQIIANLSGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDV 289
C + + GR +HA G + + L++MY RCG L +A VFD++ K+
Sbjct: 184 CCGYMASYNCGRQIHA--CCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNE 241
Query: 288 VSWTAILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIATLLPAAAKIXXXXXXXXXXXQ 109
VSW A+++ EEAL +F RM G +P FT + LL + + +
Sbjct: 242 VSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAH 301
Query: 108 AIKMSVHEDLFVGNALIDMYSKCSRVEFARHVFDKM 1
+K S +VGN L+ MY+K + A VFDK+
Sbjct: 302 LMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKL 337
Score = 75.9 bits (185), Expect = 1e-11
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 4/193 (2%)
Frame = -1
Query: 567 IKSLCESGRIKDAIGLLQRI----VSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLS 400
I G ++A+ L R+ P Y LL SC+S L +G+ LHA ++ S
Sbjct: 248 IAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMK--S 305
Query: 399 GRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIF 220
+ + + N L++MY + GS+ DA VFD++ DVVS ++L H +EA F
Sbjct: 306 SQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQF 365
Query: 219 RRMLHSGVQPNHFTIATLLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKC 40
M+ G++PN T ++L A + K ++ + ++D+ +
Sbjct: 366 DEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRA 425
Query: 39 SRVEFARHVFDKM 1
++ A+ ++M
Sbjct: 426 GLLDQAKSFIEEM 438
>ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 123 bits (309), Expect = 6e-26
Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 3/189 (1%)
Frame = -1
Query: 567 IKSLCESGRIKDAI---GLLQRIVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSG 397
+K+LC SG++K+A+ +L R V K Y +L C S+RA+ EG+ +H +I
Sbjct: 37 LKTLCSSGQLKEALLQMAILGREV--KFEGYDSILNECVSQRAIREGQRVHTHMIKTCYL 94
Query: 396 RPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFR 217
V L +LI +Y +C L DAR +FDEMP ++VVSWTA++S A EAL +F
Sbjct: 95 PSV--YLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFV 152
Query: 216 RMLHSGVQPNHFTIATLLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCS 37
ML S +PNHFT AT+L + AIK + +FVG++L+DMY+K
Sbjct: 153 EMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSG 212
Query: 36 RVEFARHVF 10
R+ A VF
Sbjct: 213 RICDAHGVF 221
Score = 88.6 bits (218), Expect = 2e-15
Identities = 53/176 (30%), Positives = 86/176 (48%)
Frame = -1
Query: 528 IGLLQRIVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEKVLANKLINMYG 349
+ +L+ P + +L SC GR +H+ IA + + L++MY
Sbjct: 152 VEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHS--IAIKRNYESHMFVGSSLLDMYA 209
Query: 348 RCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIAT 169
+ G + DA VF +P +DVV+ TAI+S EEAL +FR++ G+ N T A+
Sbjct: 210 KSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYAS 269
Query: 168 LLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFARHVFDKM 1
+L A + + ++ + + + N+LIDMYSKC V +AR +FD M
Sbjct: 270 VLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSM 325
Score = 72.4 bits (176), Expect = 2e-10
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
Frame = -1
Query: 567 IKSLCESGRIKDAIGLLQRI----VSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLS 400
I + G ++A+ L +++ ++ + Y +L + + AL+ G+ +H+ ++ S
Sbjct: 236 ISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLR--S 293
Query: 399 GRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIF 220
G+ VL N LI+MY +CG++ AR +FD MP + +SW A+L H A E L +F
Sbjct: 294 GQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELF 353
Query: 219 RRMLHSG-VQPNHFTIATLLPAAA--KIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMY 49
+ M V+P+ T +L + ++ K + D+ ++D+
Sbjct: 354 KLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLL 413
Query: 48 SKCSRVEFARHVFDKM 1
+ RVE A KM
Sbjct: 414 GRAGRVEEAFDFIKKM 429
>ref|XP_006350965.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Solanum tuberosum]
Length = 654
Score = 123 bits (308), Expect = 8e-26
Identities = 63/164 (38%), Positives = 94/164 (57%)
Frame = -1
Query: 492 SAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEKVLANKLINMYGRCGSLNDARHVF 313
S Y LL+ C + L EGR +H + + V N LINMY +C S+ DAR VF
Sbjct: 82 SLYNQLLKKCTEWKRLKEGRVVHEHFLRSRFSHYT--VPNNTLINMYAKCESMGDARKVF 139
Query: 312 DEMPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIATLLPAAAKIXXXX 133
DEMP +D+VSWTA+++ ++ A+E LV+F ML G PN FT ++L AA +
Sbjct: 140 DEMPERDMVSWTALITGYSQNEGAKEGLVLFTEMLRFGFMPNQFTFGSVLKAAGALESGG 199
Query: 132 XXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFARHVFDKM 1
+K E+++VG+AL+DMY++C ++ + VFDK+
Sbjct: 200 TGRQLHGGCVKCGYEENVYVGSALVDMYARCGLMDEGKIVFDKL 243
Score = 87.0 bits (214), Expect = 6e-15
Identities = 49/167 (29%), Positives = 82/167 (49%)
Frame = -1
Query: 501 PKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEKVLANKLINMYGRCGSLNDAR 322
P + +L++ + + GR LH + G + + L++MY RCG +++ +
Sbjct: 180 PNQFTFGSVLKAAGALESGGTGRQLHGGCVK--CGYEENVYVGSALVDMYARCGLMDEGK 237
Query: 321 HVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIATLLPAAAKIX 142
VFD++ K+ VSW +++ E AL +F M G QP HFT +++ A A I
Sbjct: 238 IVFDKLSCKNEVSWNGLIAGHARKGEGEIALKLFCEMKRGGFQPTHFTFSSVYAACANIG 297
Query: 141 XXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFARHVFDKM 1
IK + F+GN L+DMY+K ++ AR VFD++
Sbjct: 298 ALEPGKWVHVHMIKSGLELIAFIGNTLLDMYAKSGSIDDARKVFDRL 344
Score = 73.2 bits (178), Expect = 9e-11
Identities = 47/144 (32%), Positives = 70/144 (48%)
Frame = -1
Query: 582 EEEHAIKSLCESGRIKDAIGLLQRIVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANL 403
E E A+K CE R G Q P + + +C + AL G+ +H +I
Sbjct: 263 EGEIALKLFCEMKR-----GGFQ----PTHFTFSSVYAACANIGALEPGKWVHVHMIK-- 311
Query: 402 SGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVI 223
SG + + N L++MY + GS++DAR VFD + KDVVSW ++L+ H +E +
Sbjct: 312 SGLELIAFIGNTLLDMYAKSGSIDDARKVFDRLLKKDVVSWNSMLTAYAQHGLGKETVEC 371
Query: 222 FRRMLHSGVQPNHFTIATLLPAAA 151
F M G +PN T L A +
Sbjct: 372 FEEMCRIGPEPNEVTFLCALTACS 395
>gb|EOY29048.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao] gi|508781793|gb|EOY29049.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao] gi|508781794|gb|EOY29050.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 675
Score = 123 bits (308), Expect = 8e-26
Identities = 70/200 (35%), Positives = 114/200 (57%), Gaps = 5/200 (2%)
Frame = -1
Query: 585 EEEEHAIKSLCESGRIKDAIGLL-QRIVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIA 409
E+++ KSL SG + LL Q + P + Y LLL+ C R G+ +HA I+
Sbjct: 67 EDKDLLQKSLHPSGTGLHVLDLLDQGSLEPHRALYHLLLKKCTRLRKPKLGKIVHAHILN 126
Query: 408 NLSGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEAL 229
+L + V+ N L+NMY +CG L+DAR++FD+MP KD+VSWT +++ H A+
Sbjct: 127 SLFRHDL--VILNSLLNMYAKCGCLDDARNLFDQMPVKDMVSWTTLITAYSQHGRPFHAI 184
Query: 228 VIFRRMLHSGVQPNHFTIATLLPAAAKI----XXXXXXXXXXXQAIKMSVHEDLFVGNAL 61
++F ML G PN FT+++LL A+A + K +H +++VG++L
Sbjct: 185 LLFPHMLSLGFFPNQFTLSSLLKASAALPDTPHIHFHGTQLHAFCFKCGLHSNVYVGSSL 244
Query: 60 IDMYSKCSRVEFARHVFDKM 1
+DMY++C ++ AR +FD +
Sbjct: 245 LDMYARCGCMDEARLIFDAL 264
Score = 85.5 bits (210), Expect = 2e-14
Identities = 42/126 (33%), Positives = 69/126 (54%)
Frame = -1
Query: 378 LANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSG 199
+ + L++MY RCG +++AR +FD + K+ VSW A+++ A+ AL +FR+ML
Sbjct: 240 VGSSLLDMYARCGCMDEARLIFDALHSKNEVSWNALIAGHARKGQADHALWLFRKMLRQD 299
Query: 198 VQPNHFTIATLLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFAR 19
QP HFT ++L A A IK F+GN L+ MY+K ++ A+
Sbjct: 300 FQPTHFTFCSILGACASTGSLEQGKWVHAHVIKSGGEIVAFMGNTLLHMYAKSGSIQDAK 359
Query: 18 HVFDKM 1
+FD++
Sbjct: 360 MIFDRL 365
Score = 84.0 bits (206), Expect = 5e-14
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 7/162 (4%)
Frame = -1
Query: 612 RRVFSAIWEEEE---EHAIKSLCESGRIKDAIGLLQRIV----SPKTSAYILLLQSCNSK 454
R +F A+ + E I G+ A+ L ++++ P + +L +C S
Sbjct: 258 RLIFDALHSKNEVSWNALIAGHARKGQADHALWLFRKMLRQDFQPTHFTFCSILGACAST 317
Query: 453 RALSEGRSLHAQIIANLSGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTA 274
+L +G+ +HA +I SG + + N L++MY + GS+ DA+ +FD + DVVSW +
Sbjct: 318 GSLEQGKWVHAHVIK--SGGEIVAFMGNTLLHMYAKSGSIQDAKMIFDRLVKSDVVSWNS 375
Query: 273 ILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIATLLPAAAK 148
+L+ H +EA+ F+ ML GV PN T LL A ++
Sbjct: 376 MLTAYAQHGLGKEAVQWFQEMLRIGVGPNDITFLCLLTACSR 417
>ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223533942|gb|EEF35667.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 818
Score = 122 bits (306), Expect = 1e-25
Identities = 75/210 (35%), Positives = 110/210 (52%), Gaps = 1/210 (0%)
Frame = -1
Query: 627 TLTGTRRVFSAIWEEEEEHAIKSLCESGRIKDAI-GLLQRIVSPKTSAYILLLQSCNSKR 451
TL R F + + SLC GR+++A+ + + + K Y LL C + +
Sbjct: 430 TLNPYTRQFYLSSVPPNQRTLNSLCSQGRLQEALFEMACQGLEMKFDGYNTLLNECVNNK 489
Query: 450 ALSEGRSLHAQIIANLSGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAI 271
A+ EG+ +HA II V L +LI Y +C L DARHVFDEM ++VVSWTA+
Sbjct: 490 AIREGQRVHAHIIKTYYLPSV--YLRTRLIVFYTKCDLLMDARHVFDEMSERNVVSWTAM 547
Query: 270 LSCLISHDCAEEALVIFRRMLHSGVQPNHFTIATLLPAAAKIXXXXXXXXXXXQAIKMSV 91
+S A E L +F RML S ++PN FT+AT+L + IK +
Sbjct: 548 ISGYSRRGFAFETLHLFVRMLRSDIEPNEFTLATVLTSCTDASGSELGRQIHSLIIKCNY 607
Query: 90 HEDLFVGNALIDMYSKCSRVEFARHVFDKM 1
+FVG++L+DMY+K R+ AR VF+ +
Sbjct: 608 DSHIFVGSSLLDMYAKAGRILEARMVFESL 637
Score = 90.5 bits (223), Expect = 6e-16
Identities = 52/176 (29%), Positives = 89/176 (50%)
Frame = -1
Query: 528 IGLLQRIVSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRPVEKVLANKLINMYG 349
+ +L+ + P +L SC GR +H+ II + + + L++MY
Sbjct: 565 VRMLRSDIEPNEFTLATVLTSCTDASGSELGRQIHSLIIKCNYDSHI--FVGSSLLDMYA 622
Query: 348 RCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSGVQPNHFTIAT 169
+ G + +AR VF+ +P +DVVS TAI+S EEAL +FRR+ G+ N T A+
Sbjct: 623 KAGRILEARMVFESLPERDVVSCTAIISGYAQLGLDEEALELFRRLEREGLSSNCVTYAS 682
Query: 168 LLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFARHVFDKM 1
+L + + + ++ + + + N++IDMYSKC + +AR +FD M
Sbjct: 683 VLTSLSGLAALDHGKQVHSHVLRRELPFYVVLQNSMIDMYSKCGSLNYARRIFDSM 738
Score = 75.9 bits (185), Expect = 1e-11
Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Frame = -1
Query: 612 RRVFSAIWEEEEEHA---IKSLCESGRIKDAIGLLQRI----VSPKTSAYILLLQSCNSK 454
R VF ++ E + I + G ++A+ L +R+ +S Y +L S +
Sbjct: 631 RMVFESLPERDVVSCTAIISGYAQLGLDEEALELFRRLEREGLSSNCVTYASVLTSLSGL 690
Query: 453 RALSEGRSLHAQIIANLSGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTA 274
AL G+ +H+ ++ P VL N +I+MY +CGSLN AR +FD MP + V+SW A
Sbjct: 691 AALDHGKQVHSHVLRR--ELPFYVVLQNSMIDMYSKCGSLNYARRIFDSMPERTVISWNA 748
Query: 273 ILSCLISHDCAEEALVIFRRM-LHSGVQPNHFTIATLL 163
+L H E + +F+ M + V+P+ TI +L
Sbjct: 749 MLVGYGKHGMGREVVELFKLMRTENKVKPDSVTILAVL 786
>ref|XP_002983523.1| hypothetical protein SELMODRAFT_118230 [Selaginella moellendorffii]
gi|300148766|gb|EFJ15424.1| hypothetical protein
SELMODRAFT_118230 [Selaginella moellendorffii]
Length = 506
Score = 122 bits (305), Expect = 2e-25
Identities = 68/195 (34%), Positives = 104/195 (53%), Gaps = 6/195 (3%)
Frame = -1
Query: 567 IKSLCESGRIKDAIGLLQRI------VSPKTSAYILLLQSCNSKRALSEGRSLHAQIIAN 406
I + +SG ++AI L + + V P Y +L +C++ AL +G+ +H Q++
Sbjct: 30 IVAYSQSGHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEALEQGKEVHRQMVD- 88
Query: 405 LSGRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALV 226
+G + N L+NMY +CGS+ +AR VFD M + VVSWT I+S + EAL
Sbjct: 89 -AGFQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALD 147
Query: 225 IFRRMLHSGVQPNHFTIATLLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYS 46
++R+M GV+PN T A++L A + + Q DL V NAL+ +Y
Sbjct: 148 LYRKMGSEGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYG 207
Query: 45 KCSRVEFARHVFDKM 1
KC V+ AR VFD+M
Sbjct: 208 KCGSVDSARKVFDRM 222
Score = 108 bits (271), Expect = 2e-21
Identities = 65/195 (33%), Positives = 110/195 (56%), Gaps = 6/195 (3%)
Frame = -1
Query: 567 IKSLCESGRIKDAIGLLQRI----VSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLS 400
I + G ++A+ L +++ V P + +L +C+S AL EG+++HAQ+ A +
Sbjct: 133 ISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVLSACSSLGALEEGKAVHAQMKA--A 190
Query: 399 GRPVEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIF 220
G + +AN L+++YG+CGS++ AR VFD M ++VVSWTA++S H +EEA+ ++
Sbjct: 191 GYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISSYAHHRHSEEAIQLY 250
Query: 219 RRMLHSGVQPNHFTIATLLPAAAKI--XXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYS 46
+ M V PN T+A++L A A + + + D + NAL++MY+
Sbjct: 251 KAM---DVAPNAVTLASVLSACASLGNAEEGRAVHEKLASTTTGLATDEVLQNALLNMYA 307
Query: 45 KCSRVEFARHVFDKM 1
KC + AR +FD M
Sbjct: 308 KCGDGDAARKIFDAM 322
Score = 80.5 bits (197), Expect = 6e-13
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Frame = -1
Query: 567 IKSLCESGRIKDAIGLLQRI-VSPKTSAYILLLQSCNSKRALSEGRSLHAQIIANLSGRP 391
I S ++AI L + + V+P +L +C S EGR++H ++ + +G
Sbjct: 234 ISSYAHHRHSEEAIQLYKAMDVAPNAVTLASVLSACASLGNAEEGRAVHEKLASTTTGLA 293
Query: 390 VEKVLANKLINMYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRM 211
++VL N L+NMY +CG + AR +FD M +D +SW+ +++ H EA+ + R M
Sbjct: 294 TDEVLQNALLNMYAKCGDGDAARKIFDAMAVRDTMSWSTLIAAYTQHGRGGEAVEMCRSM 353
Query: 210 LHSGVQPNHFTIATLLPAAAK 148
GVQ + F T+L A ++
Sbjct: 354 ELEGVQASSFIYGTVLTACSQ 374
Score = 70.5 bits (171), Expect = 6e-10
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = -1
Query: 357 MYGRCGSLNDARHVFDEMPHKDVVSWTAILSCLISHDCAEEALVIFRRMLHSG--VQPNH 184
M+ +CGSL ++R VFD+ KDV+ W +++ EA+ +F+ M S V+PN
Sbjct: 1 MFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNA 60
Query: 183 FTIATLLPAAAKIXXXXXXXXXXXQAIKMSVHEDLFVGNALIDMYSKCSRVEFARHVFDK 4
T T+L A + + Q + D N+L++MY+KC + AR VFD
Sbjct: 61 ITYTTVLAACSAVEALEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDG 120
Query: 3 M 1
M
Sbjct: 121 M 121