BLASTX nr result

ID: Ephedra25_contig00023206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00023206
         (616 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25975.1| unknown [Picea sitchensis]                              76   8e-12
gb|ACK44526.1| AT5G09995-like protein [Arabidopsis arenosa]            57   5e-06

>gb|ABK25975.1| unknown [Picea sitchensis]
          Length = 262

 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
 Frame = -3

Query: 614 SDLGQEITKGFKNSTRAFKEAKHKVRHMTNMVSIGSKKSEQR----IMEKTLAMKVRSLH 447
           SDLGQEIT+G + ST+A + A+  +RHMTNM S+ S +   +    IM+  +A   RSLH
Sbjct: 160 SDLGQEITEGVRRSTKAVRAAEDGLRHMTNMASVASLQDRAKVHADIMKPAIARTARSLH 219

Query: 446 ETIVQGRRMYKGFLLLHYLSGWL 378
           + IVQGR   K  +  + LSGWL
Sbjct: 220 DGIVQGRSTLKSLIAFNQLSGWL 242


>gb|ACK44526.1| AT5G09995-like protein [Arabidopsis arenosa]
          Length = 256

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
 Frame = -3

Query: 614 SDLGQEITKGFKNSTRAFKEAKHKVRHMTNMVSIGSKKSEQRIMEKT--------LAMKV 459
           SDLGQ IT+G K+STRA + A+ ++R +TNM    +  S Q +M +T        +A K 
Sbjct: 164 SDLGQGITQGVKSSTRAIRVAEDRLRRLTNM----NPASMQEVMHRTKTEETEPMVARKA 219

Query: 458 RSLHETIVQGRRMYKGFLLLHYLSGWLRSHRRKR 357
           RSL E IV+GR +++ F  +   S    S+  KR
Sbjct: 220 RSLKEGIVKGRSLWQLFSTITRFSKTTTSYLAKR 253


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