BLASTX nr result

ID: Ephedra25_contig00023034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00023034
         (421 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006294219.1| hypothetical protein CARUB_v10023215mg [Caps...    56   4e-06
ref|XP_002961249.1| hypothetical protein SELMODRAFT_402980 [Sela...    56   4e-06
ref|XP_002969483.1| hypothetical protein SELMODRAFT_410184 [Sela...    56   6e-06

>ref|XP_006294219.1| hypothetical protein CARUB_v10023215mg [Capsella rubella]
           gi|482562927|gb|EOA27117.1| hypothetical protein
           CARUB_v10023215mg [Capsella rubella]
          Length = 446

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/95 (34%), Positives = 50/95 (52%)
 Frame = -3

Query: 419 RLGGFGSVCNAYKSTKFPPTDIVGLFNFSETTRSRIYNATISELMSAHLQQFETASTKKD 240
           RLGG G VC+ YK +   P ++V +FNFS+    RI  A+++EL SA  +  E  + +  
Sbjct: 232 RLGGTGYVCSTYKGSSPYPVEMVRMFNFSDKVIERIVQASVTELSSAKTESPEENNQQGV 291

Query: 239 SNLETVHNVLHGDIDTPLEQGSTLCQTETESNIVP 135
           SN E   N +    D+ +E  S   +     N+VP
Sbjct: 292 SNTENNINEI-ATSDSMVEDVSVTAEVRVVDNVVP 325


>ref|XP_002961249.1| hypothetical protein SELMODRAFT_402980 [Selaginella moellendorffii]
           gi|300172188|gb|EFJ38788.1| hypothetical protein
           SELMODRAFT_402980 [Selaginella moellendorffii]
          Length = 477

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
 Frame = -3

Query: 419 RLGGFGSVCNAYKSTKFPPTDIVGLFNFSETTRSRIYNATISELMSAH---LQQFETAS- 252
           RL GFG+VC+ Y + K P  DIVGLFNF   T SRI+   +S L+ ++   LQ  E A  
Sbjct: 215 RLSGFGTVCSVYYTPKAPSLDIVGLFNFDSATSSRIFRVRLSTLLESYNSGLQNGEAAPL 274

Query: 251 -TKKDSNLE 228
             +++ N+E
Sbjct: 275 VVEQEKNME 283


>ref|XP_002969483.1| hypothetical protein SELMODRAFT_410184 [Selaginella moellendorffii]
           gi|300162959|gb|EFJ29571.1| hypothetical protein
           SELMODRAFT_410184 [Selaginella moellendorffii]
          Length = 477

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
 Frame = -3

Query: 419 RLGGFGSVCNAYKSTKFPPTDIVGLFNFSETTRSRIYNATISELMSAH---LQQFETAS- 252
           RL GFG+VC+ Y + K P  DIVGLFNF   T SRI+   +S L+ ++   LQ  E A  
Sbjct: 215 RLSGFGTVCSVYYTPKAPSLDIVGLFNFDSATSSRIFRVRLSTLLESYNSGLQNGEPAPL 274

Query: 251 -TKKDSNLE 228
             +++ N+E
Sbjct: 275 VVEQEKNME 283


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