BLASTX nr result
ID: Ephedra25_contig00022373
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00022373
(456 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC64917.1| gag-pol polyprotein [Glycine max] 81 1e-13
gb|AAO73525.1| gag-pol polyprotein [Glycine max] 80 2e-13
gb|AAO73529.1| gag-pol polyprotein [Glycine max] 80 2e-13
gb|AAO73521.1| gag-pol polyprotein [Glycine max] 78 1e-12
gb|AAO73523.1| gag-pol polyprotein [Glycine max] 78 1e-12
gb|AAO73527.1| gag-pol polyprotein [Glycine max] 78 1e-12
gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japoni... 74 2e-11
gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group] 74 2e-11
emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group] 74 2e-11
gb|ABF94836.1| retrotransposon protein, putative, unclassified [... 74 2e-11
gb|ABF93543.1| retrotransposon protein, putative, unclassified [... 74 2e-11
gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza s... 74 2e-11
ref|XP_004514121.1| PREDICTED: uncharacterized protein LOC101493... 72 6e-11
emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera] 72 8e-11
emb|CAN61143.1| hypothetical protein VITISV_004318 [Vitis vinifera] 72 8e-11
ref|NP_001053658.2| Os04g0582400 [Oryza sativa Japonica Group] g... 72 1e-10
emb|CAN63869.1| hypothetical protein VITISV_006090 [Vitis vinifera] 72 1e-10
emb|CAD41367.2| OSJNBa0088A01.6 [Oryza sativa Japonica Group] 72 1e-10
ref|XP_003382140.1| copia protein [Trichinella spiralis] gi|3169... 71 1e-10
ref|XP_003376316.1| retrovirus-related Pol polyprotein from tran... 71 1e-10
>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
Length = 1550
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/70 (54%), Positives = 51/70 (72%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NISKNP+ H R+KHIDI++ Y+R+ V D IT+EH+ T+EQ +DI KA D QFE L
Sbjct: 1480 INISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLEHVDTEEQIADIFTKALDANQFEKLR 1539
Query: 199 SKLGMI*LKD 170
KLG+ L+D
Sbjct: 1540 GKLGICLLED 1549
>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/70 (54%), Positives = 50/70 (71%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NISKNP+ H R+KHIDI++ Y+R+ V D IT+EH+ T+EQ +DI KA D QFE L
Sbjct: 1506 INISKNPVQHNRTKHIDIRHHYIRDLVDDKIITLEHVDTEEQVADIFTKALDANQFEKLR 1565
Query: 199 SKLGMI*LKD 170
KLG L+D
Sbjct: 1566 GKLGTCLLED 1575
>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
Length = 1577
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/70 (54%), Positives = 51/70 (72%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NISKNP+ H R+KHIDI++ Y+RE V D IT+EH+ T+EQ +DI KA D QFE L
Sbjct: 1507 INISKNPVQHSRTKHIDIRHHYIRELVDDKVITLEHVDTEEQIADIFTKALDAKQFEKLR 1566
Query: 199 SKLGMI*LKD 170
KLG+ L++
Sbjct: 1567 GKLGICLLEE 1576
>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
Length = 1574
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/70 (51%), Positives = 51/70 (72%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NISKNP+ H R+KHIDI++ Y+R+ V D IT++H+ T+EQ +DI KA D QFE L
Sbjct: 1504 INISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLR 1563
Query: 199 SKLGMI*LKD 170
KLG+ L++
Sbjct: 1564 GKLGICLLEE 1573
>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/70 (51%), Positives = 51/70 (72%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NISKNP+ H R+KHIDI++ Y+R+ V D IT++H+ T+EQ +DI KA D QFE L
Sbjct: 1506 INISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLR 1565
Query: 199 SKLGMI*LKD 170
KLG+ L++
Sbjct: 1566 GKLGICVLEE 1575
>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/70 (51%), Positives = 51/70 (72%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NISKNP+ H R+KHIDI++ Y+R+ V D IT++H+ T+EQ +DI KA D QFE L
Sbjct: 1506 INISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLR 1565
Query: 199 SKLGMI*LKD 170
KLG+ L++
Sbjct: 1566 GKLGICLLEE 1575
>gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108712101|gb|ABF99896.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1969
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/66 (46%), Positives = 51/66 (77%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NI+KNP+ H R+KHI+I+Y +LR+ V GTI +E + +++Q +DI K D+++FE+L
Sbjct: 1724 INIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLR 1783
Query: 199 SKLGMI 182
S+LG+I
Sbjct: 1784 SELGVI 1789
>gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1799
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/66 (46%), Positives = 51/66 (77%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NI+KNP+ H R+KHI+I+Y +LR+ V GTI +E + +++Q +DI K D+++FE+L
Sbjct: 1728 INIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLR 1787
Query: 199 SKLGMI 182
S+LG+I
Sbjct: 1788 SELGVI 1793
>emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group]
Length = 2256
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/66 (46%), Positives = 51/66 (77%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NI+KNP+ H R+KHI+I+Y +LR+ V GTI +E + +++Q +DI K D+++FE+L
Sbjct: 1703 INIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLR 1762
Query: 199 SKLGMI 182
S+LG+I
Sbjct: 1763 SELGVI 1768
>gb|ABF94836.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1948
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/66 (46%), Positives = 51/66 (77%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NI+KNP+ H R+KHI+I+Y +LR+ V GTI +E + +++Q +DI K D+++FE+L
Sbjct: 1703 INIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLR 1762
Query: 199 SKLGMI 182
S+LG+I
Sbjct: 1763 SELGVI 1768
>gb|ABF93543.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2124
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/66 (46%), Positives = 51/66 (77%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NI+KNP+ H R+KHI+I+Y +LR+ V GTI +E + +++Q +DI K D+++FE+L
Sbjct: 1703 INIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLR 1762
Query: 199 SKLGMI 182
S+LG+I
Sbjct: 1763 SELGVI 1768
>gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa Japonica
Group]
Length = 2145
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/66 (46%), Positives = 51/66 (77%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NI+KNP+ H R+KHI+I+Y +LR+ V GTI +E + +++Q +DI K D+++FE+L
Sbjct: 1724 INIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLR 1783
Query: 199 SKLGMI 182
S+LG+I
Sbjct: 1784 SELGVI 1789
>ref|XP_004514121.1| PREDICTED: uncharacterized protein LOC101493292 [Cicer arietinum]
Length = 1614
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/66 (50%), Positives = 49/66 (74%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NI+KNP+ H R+KH++I +++EK+ G I +E+IP++ Q +DIL KA K+ FE L
Sbjct: 1339 INIAKNPVHHDRTKHVEIDRHFIKEKIDGGVIKLEYIPSKNQIADILNKALHKSNFENLR 1398
Query: 199 SKLGMI 182
SKLGMI
Sbjct: 1399 SKLGMI 1404
>emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera]
Length = 956
Score = 72.0 bits (175), Expect = 8e-11
Identities = 30/65 (46%), Positives = 49/65 (75%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NISKNP+LH R+KHIDI++ ++R+ V D +++E++PT+ Q +DIL K D ++FE L
Sbjct: 888 INISKNPVLHSRTKHIDIRHHFIRDLVEDKVVSLEYVPTEGQIADILTKPLDVSRFESLR 947
Query: 199 SKLGM 185
+G+
Sbjct: 948 KSIGL 952
>emb|CAN61143.1| hypothetical protein VITISV_004318 [Vitis vinifera]
Length = 324
Score = 72.0 bits (175), Expect = 8e-11
Identities = 30/65 (46%), Positives = 49/65 (75%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NISKNP+LH R+KHIDI++ ++R+ V D +++E++PT+ Q +DIL K D ++FE L
Sbjct: 256 INISKNPVLHSRTKHIDIRHHFIRDLVEDKVVSLEYVPTEGQIADILTKPLDVSRFESLR 315
Query: 199 SKLGM 185
+G+
Sbjct: 316 KSIGL 320
>ref|NP_001053658.2| Os04g0582400 [Oryza sativa Japonica Group]
gi|255675718|dbj|BAF15572.2| Os04g0582400 [Oryza sativa
Japonica Group]
Length = 596
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/67 (46%), Positives = 50/67 (74%)
Frame = -3
Query: 373 ISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLGSK 194
+SKNP+ H+RSKHI +Y Y+RE+V DG++ +E + T+ Q +DIL KA +T+F+ L S+
Sbjct: 525 LSKNPVFHERSKHIATRYHYIRERVEDGSVHVEFVGTEGQIADILTKALGRTRFQELRSR 584
Query: 193 LGMI*LK 173
+G+ +K
Sbjct: 585 IGVADVK 591
>emb|CAN63869.1| hypothetical protein VITISV_006090 [Vitis vinifera]
Length = 324
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/65 (46%), Positives = 49/65 (75%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+NISKNP+LH R+KHIDI++ ++R+ V D +++E++PT+ Q +DIL K D ++FE L
Sbjct: 256 INISKNPVLHXRTKHIDIRHHFIRDLVEDKVVSLEYVPTEGQIADILTKPLDVSRFESLR 315
Query: 199 SKLGM 185
+G+
Sbjct: 316 KSIGL 320
>emb|CAD41367.2| OSJNBa0088A01.6 [Oryza sativa Japonica Group]
Length = 1403
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/67 (46%), Positives = 50/67 (74%)
Frame = -3
Query: 373 ISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLGSK 194
+SKNP+ H+RSKHI +Y Y+RE+V DG++ +E + T+ Q +DIL KA +T+F+ L S+
Sbjct: 1332 LSKNPVFHERSKHIATRYHYIRERVEDGSVHVEFVGTEGQIADILTKALGRTRFQELRSR 1391
Query: 193 LGMI*LK 173
+G+ +K
Sbjct: 1392 IGVADVK 1398
>ref|XP_003382140.1| copia protein [Trichinella spiralis] gi|316978910|gb|EFV61801.1|
copia protein [Trichinella spiralis]
Length = 99
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/66 (46%), Positives = 49/66 (74%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+ +SKNP H+RSKHID+++ ++REK +G I I+HI ++ Q +DIL KA KT+F+ L
Sbjct: 28 VKLSKNPEFHKRSKHIDVRFHFVREKYNEGKIDIQHIDSENQKADILTKALPKTRFQNLR 87
Query: 199 SKLGMI 182
+LG++
Sbjct: 88 QQLGIV 93
>ref|XP_003376316.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trichinella spiralis] gi|316974974|gb|EFV58439.1|
retrovirus-related Pol polyprotein from transposon TNT
1-94 [Trichinella spiralis]
Length = 510
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/66 (46%), Positives = 49/66 (74%)
Frame = -3
Query: 379 MNISKNPILHQRSKHIDIKYCYLREKVADGTITIEHIPTQEQTSDILIKATDKTQFEYLG 200
+ +SKNP H+RSKHID+++ ++REK +G I I+HI ++ Q +DIL KA KT+F+ L
Sbjct: 439 VKLSKNPEFHKRSKHIDVRFHFVREKYNEGKIDIQHIDSENQKADILTKALPKTRFQNLR 498
Query: 199 SKLGMI 182
+LG++
Sbjct: 499 QQLGIV 504