BLASTX nr result

ID: Ephedra25_contig00022153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00022153
         (425 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77085.1| unknown [Picea sitchensis]                              75   9e-12
dbj|BAK64051.1| cyclin B;1 [Physcomitrella patens]                     65   7e-09
ref|XP_001766978.1| predicted protein [Physcomitrella patens] gi...    65   9e-09
dbj|BAK64052.1| cyclin B;2 [Physcomitrella patens]                     62   1e-07
ref|XP_004961650.1| PREDICTED: cyclin-B1-5-like [Setaria italica]      58   1e-06

>gb|ADE77085.1| unknown [Picea sitchensis]
          Length = 465

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 57/144 (39%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
 Frame = +3

Query: 6   NSRRALGDIGNIVADIGGKCNVKEGLIIEKNGQAITRPVTRSFGAQLLAQAAVSDKNAGV 185
           N+RRALGDIGNIV D G     KEG+   K    ++RP+TRSFGAQL+AQAA    N G+
Sbjct: 30  NNRRALGDIGNIVVDAGVNVT-KEGVNGRKPLAQVSRPITRSFGAQLIAQAAA---NKGI 85

Query: 186 PQKEDVQPQLVVNCKVERKDEKLVWGNRQKRTNKCKXXXXXXXXXXXXXXXEEVVVLE-- 359
               +     VV  K E     +V  N Q+RT K K               ++ V++E  
Sbjct: 86  FAANNQTQAPVVIPKAE-----VVRANNQRRTRKSK--DIPPTTAVPEDKSDDCVIIEQP 138

Query: 360 --AKPACTKNAPRVSKKVKPSTFT 425
              KPAC +NA     K KP   T
Sbjct: 139 HRIKPACNRNAGAAGNKEKPRLVT 162


>dbj|BAK64051.1| cyclin B;1 [Physcomitrella patens]
          Length = 503

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
 Frame = +3

Query: 6   NSRRALGDIGNIVADIGGKCNVKEGLIIEK--------NGQAITRPVTRSFGAQLLAQAA 161
           ++RRALGDIGN+V  +  +CNV +  ++E           +AITRP+TR FGA L  Q A
Sbjct: 42  SNRRALGDIGNLVGAMSVRCNVSKDGVVENAVVKPAALQAEAITRPITRRFGASLHNQQA 101

Query: 162 VSDKNAGVPQKEDV-QPQLVVNCKVERKDEKLVWGNRQKRT 281
               NA VPQ   V  P  VV  + +  D+   WG  ++RT
Sbjct: 102 ----NARVPQAVQVPAPSEVVKPEPKNADDVAAWGATKRRT 138


>ref|XP_001766978.1| predicted protein [Physcomitrella patens]
           gi|162681720|gb|EDQ68144.1| predicted protein
           [Physcomitrella patens]
          Length = 453

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
 Frame = +3

Query: 6   NSRRALGDIGNIVADIGGKCNVKEGLIIEK--------NGQAITRPVTRSFGAQLLAQAA 161
           ++RRALGDIGN+V  +  +CNV +  ++E           +AITRP+TR FGA L  Q A
Sbjct: 336 SNRRALGDIGNLVGAMSVRCNVSKDGVLENAVVKHAALQAEAITRPITRRFGANLQNQQA 395

Query: 162 VSDKNAGVPQKEDVQPQLVVNCKVERKDEKLVWGNRQKRTNKCK 293
                A VPQ   VQP  V   + +  D+   WG  ++RT + K
Sbjct: 396 A----ARVPQAV-VQPTEVAKAEQKAVDDVAAWGATKRRTTQPK 434


>dbj|BAK64052.1| cyclin B;2 [Physcomitrella patens]
          Length = 501

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
 Frame = +3

Query: 6   NSRRALGDIGNIVADIGGKCNVKEGLIIEK--------NGQAITRPVTRSFGAQLLAQAA 161
           ++RRALGDIGN+V  +  +CNV +  ++E           +AITRP+TR FGA L  Q A
Sbjct: 43  SNRRALGDIGNLVGAMSVRCNVSKDGVLENAVVKHAALQAEAITRPITRRFGANLQNQQA 102

Query: 162 VSDKNAGVPQKEDVQPQLVVNCKVERKDEKLVWGNRQKRTNKCK 293
                A VPQ   VQP  V   +   +D+   WG  ++RT + K
Sbjct: 103 A----ARVPQAV-VQPTEVAKAE---QDDVAAWGATKRRTTQPK 138


>ref|XP_004961650.1| PREDICTED: cyclin-B1-5-like [Setaria italica]
          Length = 439

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = +3

Query: 12  RRALGDIGNIVADI-GGKCNVKEGLIIEKNGQAITRPVTRSFGAQLLAQAAVSDKNAGVP 188
           RRALGDIGN+V D+  GK  + EG         I RP+TRSFGAQLL  AA++ +NA  P
Sbjct: 34  RRALGDIGNVVTDVHDGKIQLPEG---------INRPITRSFGAQLLKNAALAKQNAVAP 84

Query: 189 QKEDVQPQLV 218
             + V  + V
Sbjct: 85  PAKPVAARAV 94


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