BLASTX nr result
ID: Ephedra25_contig00020679
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00020679
(444 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002324689.2| hypothetical protein POPTR_0018s13840g [Popu... 73 3e-11
ref|XP_006372183.1| hypothetical protein POPTR_0018s13840g [Popu... 73 3e-11
ref|XP_004292631.1| PREDICTED: transcription factor ABORTED MICR... 66 4e-09
gb|EEC76984.1| hypothetical protein OsI_15289 [Oryza sativa Indi... 66 5e-09
ref|NP_001173851.1| Os04g0300600 [Oryza sativa Japonica Group] g... 65 9e-09
gb|EEE60703.1| hypothetical protein OsJ_14194 [Oryza sativa Japo... 65 1e-08
gb|ACG33141.1| DNA binding like [Zea mays] 64 2e-08
ref|XP_001773179.1| predicted protein [Physcomitrella patens] gi... 64 2e-08
gb|ABK92754.1| unknown [Populus trichocarpa] 64 2e-08
tpg|DAA38309.1| TPA: putative HLH DNA-binding domain superfamily... 64 3e-08
tpg|DAA38308.1| TPA: putative HLH DNA-binding domain superfamily... 64 3e-08
tpg|DAA38307.1| TPA: putative HLH DNA-binding domain superfamily... 64 3e-08
gb|AFK34445.1| unknown [Lotus japonicus] 64 3e-08
gb|ACN21642.1| putative basic helix-loop-helix protein BHLH20 [L... 64 3e-08
ref|NP_001132214.1| uncharacterized protein LOC100193646 [Zea ma... 64 3e-08
ref|XP_006341751.1| PREDICTED: transcription factor bHLH35-like ... 63 4e-08
ref|NP_568850.1| transcription factor bHLH35 [Arabidopsis thalia... 63 4e-08
ref|XP_002973583.1| hypothetical protein SELMODRAFT_16039 [Selag... 63 4e-08
ref|XP_002975607.1| hypothetical protein SELMODRAFT_16038 [Selag... 63 4e-08
ref|XP_002864502.1| basic helix-loop-helix family protein [Arabi... 63 4e-08
>ref|XP_002324689.2| hypothetical protein POPTR_0018s13840g [Populus trichocarpa]
gi|550318697|gb|EEF03254.2| hypothetical protein
POPTR_0018s13840g [Populus trichocarpa]
Length = 244
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Frame = -2
Query: 227 FFQDSSTSFEEDHLNKDVHDNKE---TSVTSVSRNLMSERKRRSKFNQSLYALRAAVPTV 57
F+ D TS+E D + ++D+ + S SRN +SER RR K N LYALR AVP +
Sbjct: 20 FWNDELTSWEMDQASSQIYDSSSPDGAASASASRNTVSERNRRKKLNDKLYALREAVPRI 79
Query: 56 TKMDKASTVRDAIKHIKD 3
+K+DKAS ++DAI +I+D
Sbjct: 80 SKLDKASIIKDAIDYIQD 97
>ref|XP_006372183.1| hypothetical protein POPTR_0018s13840g [Populus trichocarpa]
gi|550318696|gb|ERP49980.1| hypothetical protein
POPTR_0018s13840g [Populus trichocarpa]
Length = 216
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Frame = -2
Query: 227 FFQDSSTSFEEDHLNKDVHDNKE---TSVTSVSRNLMSERKRRSKFNQSLYALRAAVPTV 57
F+ D TS+E D + ++D+ + S SRN +SER RR K N LYALR AVP +
Sbjct: 20 FWNDELTSWEMDQASSQIYDSSSPDGAASASASRNTVSERNRRKKLNDKLYALREAVPRI 79
Query: 56 TKMDKASTVRDAIKHIKD 3
+K+DKAS ++DAI +I+D
Sbjct: 80 SKLDKASIIKDAIDYIQD 97
>ref|XP_004292631.1| PREDICTED: transcription factor ABORTED MICROSPORES-like [Fragaria
vesca subsp. vesca]
Length = 554
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Frame = -2
Query: 245 DVELAGFFQDSSTSFEEDHLNKDVHDNKETSVT--------SVSRNLMSERKRRSKFNQS 90
++E G D + + DH D D + + S+NL++ERKRR K N+
Sbjct: 261 NMEQQGTLDDQDSIKQADHSASDCSDQTDENTNYKRRNGKEPQSKNLVAERKRRKKLNEK 320
Query: 89 LYALRAAVPTVTKMDKASTVRDAIKHIKD 3
LY LR+ VP ++KMDKAS ++DAI ++KD
Sbjct: 321 LYKLRSLVPNISKMDKASILKDAIDYVKD 349
>gb|EEC76984.1| hypothetical protein OsI_15289 [Oryza sativa Indica Group]
Length = 285
Score = 65.9 bits (159), Expect = 5e-09
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = -2
Query: 245 DVELAGFFQDSSTSFEEDHLNKDVHDNKETSVTSV---SRNLMSERKRRSKFNQSLYALR 75
D L+ + +S S D + DV + T+V S S+N+ ER RR + N+ L+ALR
Sbjct: 56 DESLSELYAYTSQSRYADSSSPDVVNLCSTAVASAAASSKNIAMERDRRKRLNEKLFALR 115
Query: 74 AAVPTVTKMDKASTVRDAIKHIK 6
A VP +TKMDKAS VRDAI HI+
Sbjct: 116 AVVPKITKMDKASIVRDAIAHIE 138
>ref|NP_001173851.1| Os04g0300600 [Oryza sativa Japonica Group]
gi|57834070|emb|CAE05570.2| OSJNBb0013O03.11 [Oryza
sativa Japonica Group] gi|255675302|dbj|BAH92579.1|
Os04g0300600 [Oryza sativa Japonica Group]
Length = 293
Score = 65.1 bits (157), Expect = 9e-09
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Frame = -2
Query: 245 DVELAGFFQDSSTSFEEDHLNKDVHDNKETSVTSV-----SRNLMSERKRRSKFNQSLYA 81
D L+ + +S S D + DV + T+V S S+N+ ER RR + N+ L+A
Sbjct: 56 DESLSELYAYTSQSRYADSSSPDVVNLCSTAVASAAAAASSKNIAMERDRRKRLNEKLFA 115
Query: 80 LRAAVPTVTKMDKASTVRDAIKHIK 6
LRA VP +TKMDKAS VRDAI HI+
Sbjct: 116 LRAVVPKITKMDKASIVRDAIAHIE 140
>gb|EEE60703.1| hypothetical protein OsJ_14194 [Oryza sativa Japonica Group]
Length = 268
Score = 64.7 bits (156), Expect = 1e-08
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Frame = -2
Query: 245 DVELAGFFQDSSTSFEEDHLNKDVHDNKETSVTSV-----SRNLMSERKRRSKFNQSLYA 81
D L+ + +S S D + DV + T++ S S+N+ ER RR + N++L+A
Sbjct: 56 DESLSELYAYTSQSRYADSSSPDVVNLCSTAIPSAATAASSKNIAMERDRRKRLNENLFA 115
Query: 80 LRAAVPTVTKMDKASTVRDAIKHIK 6
LRA VP +TKMDKAS VRDAI HI+
Sbjct: 116 LRAVVPKITKMDKASIVRDAIAHIE 140
>gb|ACG33141.1| DNA binding like [Zea mays]
Length = 263
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = -2
Query: 149 TSVSRNLMSERKRRSKFNQSLYALRAAVPTVTKMDKASTVRDAIKHIK 6
T+ +RN+ ER RR K N+ LYALR+ VP +TKMDKAS VRDAI HI+
Sbjct: 43 TTTTRNMAMERTRRRKLNERLYALRSVVPNITKMDKASIVRDAIAHIE 90
>ref|XP_001773179.1| predicted protein [Physcomitrella patens]
gi|162675538|gb|EDQ62032.1| predicted protein
[Physcomitrella patens]
Length = 550
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/79 (41%), Positives = 51/79 (64%)
Frame = -2
Query: 239 ELAGFFQDSSTSFEEDHLNKDVHDNKETSVTSVSRNLMSERKRRSKFNQSLYALRAAVPT 60
E+ G D S E+D + ++ +S+NL++ERKRR K N+ LY+LRA VP
Sbjct: 286 EIRGDSSDCSDPMEDD----EEKGGPRSARRHLSKNLVAERKRRKKLNERLYSLRALVPK 341
Query: 59 VTKMDKASTVRDAIKHIKD 3
+TKMD+AS + DAI+++K+
Sbjct: 342 ITKMDRASILGDAIEYVKE 360
>gb|ABK92754.1| unknown [Populus trichocarpa]
Length = 215
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Frame = -2
Query: 194 DHLNKDVHDNKE---TSVTSVSRNLMSERKRRSKFNQSLYALRAAVPTVTKMDKASTVRD 24
D + ++D+ + S SRN +SER RR K N LYALR AVP ++K+DKAS ++D
Sbjct: 2 DQASSQIYDSSSPDGAASASASRNTVSERNRRKKLNDKLYALREAVPRISKLDKASIIKD 61
Query: 23 AIKHIKD 3
AI +I+D
Sbjct: 62 AIDYIQD 68
>tpg|DAA38309.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 308
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = -2
Query: 149 TSVSRNLMSERKRRSKFNQSLYALRAAVPTVTKMDKASTVRDAIKHIK 6
T+ +RN+ ER RR K N+ LYALR+ VP +TKMDKAS VRDAI HI+
Sbjct: 87 TTTTRNMDMERTRRRKLNERLYALRSVVPNITKMDKASIVRDAIAHIE 134
>tpg|DAA38308.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 382
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = -2
Query: 149 TSVSRNLMSERKRRSKFNQSLYALRAAVPTVTKMDKASTVRDAIKHIK 6
T+ +RN+ ER RR K N+ LYALR+ VP +TKMDKAS VRDAI HI+
Sbjct: 87 TTTTRNMDMERTRRRKLNERLYALRSVVPNITKMDKASIVRDAIAHIE 134
>tpg|DAA38307.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 274
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = -2
Query: 149 TSVSRNLMSERKRRSKFNQSLYALRAAVPTVTKMDKASTVRDAIKHIK 6
T+ +RN+ ER RR K N+ LYALR+ VP +TKMDKAS VRDAI HI+
Sbjct: 86 TTTTRNMDMERTRRRKLNERLYALRSVVPNITKMDKASIVRDAIAHIE 133
>gb|AFK34445.1| unknown [Lotus japonicus]
Length = 324
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/73 (41%), Positives = 46/73 (63%)
Frame = -2
Query: 221 QDSSTSFEEDHLNKDVHDNKETSVTSVSRNLMSERKRRSKFNQSLYALRAAVPTVTKMDK 42
+DSS++ + + + K T S+ L+SER+RR + + LYALRA VP +TKMDK
Sbjct: 110 EDSSSAGTTSTMETKIVNGKSRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDK 169
Query: 41 ASTVRDAIKHIKD 3
AS + DA+ ++ D
Sbjct: 170 ASIIGDAVSYVYD 182
>gb|ACN21642.1| putative basic helix-loop-helix protein BHLH20 [Lotus japonicus]
Length = 324
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/73 (41%), Positives = 46/73 (63%)
Frame = -2
Query: 221 QDSSTSFEEDHLNKDVHDNKETSVTSVSRNLMSERKRRSKFNQSLYALRAAVPTVTKMDK 42
+DSS++ + + + K T S+ L+SER+RR + + LYALRA VP +TKMDK
Sbjct: 110 EDSSSAGTTSTMETKIVNGKSRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDK 169
Query: 41 ASTVRDAIKHIKD 3
AS + DA+ ++ D
Sbjct: 170 ASIIGDAVSYVYD 182
>ref|NP_001132214.1| uncharacterized protein LOC100193646 [Zea mays]
gi|194693784|gb|ACF80976.1| unknown [Zea mays]
Length = 382
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = -2
Query: 149 TSVSRNLMSERKRRSKFNQSLYALRAAVPTVTKMDKASTVRDAIKHIK 6
T+ +RN+ ER RR K N+ LYALR+ VP +TKMDKAS VRDAI HI+
Sbjct: 87 TTTTRNMDMERTRRRKLNERLYALRSVVPNITKMDKASIVRDAIAHIE 134
>ref|XP_006341751.1| PREDICTED: transcription factor bHLH35-like [Solanum tuberosum]
Length = 234
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = -2
Query: 242 VELAGFFQDSSTSFEEDHLNKDVHDNKETSVTSVSRNLMSERKRRSKFNQSLYALRAAVP 63
+E FFQ S + ++ + +D+ S+N++SER RR+K + L+ALRA VP
Sbjct: 12 LETTMFFQPDS--YLDEPIISSYYDSSSPEGAQSSKNIVSERIRRNKLKEKLFALRAHVP 69
Query: 62 TVTKMDKASTVRDAIKHIKD 3
+TKMDKAS V+DAI +I++
Sbjct: 70 KITKMDKASIVKDAIAYIEE 89
>ref|NP_568850.1| transcription factor bHLH35 [Arabidopsis thaliana]
gi|332009470|gb|AED96853.1| transcription factor bHLH35
[Arabidopsis thaliana]
Length = 247
Score = 63.2 bits (152), Expect = 4e-08
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 12/92 (13%)
Frame = -2
Query: 245 DVELAGFFQDSSTSFEEDH------LNKDVHDNKETSV------TSVSRNLMSERKRRSK 102
D EL+ +++ SS ED L + + + ++S + S+N++SER RR K
Sbjct: 6 DQELSNYWEPSSFLQNEDFEYDSWPLEEAISGSYDSSSPDGAASSPASKNIVSERNRRQK 65
Query: 101 FNQSLYALRAAVPTVTKMDKASTVRDAIKHIK 6
NQ L+ALR+ VP +TKMDKAS ++DAI +I+
Sbjct: 66 LNQRLFALRSVVPNITKMDKASIIKDAISYIE 97
>ref|XP_002973583.1| hypothetical protein SELMODRAFT_16039 [Selaginella moellendorffii]
gi|300158621|gb|EFJ25243.1| hypothetical protein
SELMODRAFT_16039 [Selaginella moellendorffii]
Length = 169
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = -2
Query: 146 SVSRNLMSERKRRSKFNQSLYALRAAVPTVTKMDKASTVRDAIKHIKD 3
S S+NL+SERKRR K N+ LY+LRA VP ++KMDKAS V DAI ++++
Sbjct: 4 SASKNLVSERKRRKKLNERLYSLRAIVPKISKMDKASIVADAIDYVQE 51
>ref|XP_002975607.1| hypothetical protein SELMODRAFT_16038 [Selaginella moellendorffii]
gi|300156608|gb|EFJ23236.1| hypothetical protein
SELMODRAFT_16038 [Selaginella moellendorffii]
Length = 169
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = -2
Query: 146 SVSRNLMSERKRRSKFNQSLYALRAAVPTVTKMDKASTVRDAIKHIKD 3
S S+NL+SERKRR K N+ LY+LRA VP ++KMDKAS V DAI ++++
Sbjct: 4 SASKNLVSERKRRKKLNERLYSLRAIVPKISKMDKASIVADAIDYVQE 51
>ref|XP_002864502.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata] gi|297310337|gb|EFH40761.1| basic
helix-loop-helix family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 247
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/45 (62%), Positives = 37/45 (82%)
Frame = -2
Query: 140 SRNLMSERKRRSKFNQSLYALRAAVPTVTKMDKASTVRDAIKHIK 6
S+N++SER RR K NQ L+ALR+ VP +TKMDKAS ++DAI +IK
Sbjct: 53 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIK 97