BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00020459
         (1087 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   287   6e-75
ref|XP_006490375.1| PREDICTED: WD repeat-containing protein RUP2...   283   6e-74
ref|XP_006421902.1| hypothetical protein CICLE_v10005222mg [Citr...   281   3e-73
ref|XP_001756425.1| predicted protein [Physcomitrella patens] gi...   279   2e-72
ref|XP_002321910.2| hypothetical protein POPTR_0015s13210g, part...   277   5e-72
ref|XP_004309213.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   276   8e-72
ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ric...   276   8e-72
ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   274   4e-71
ref|XP_002318819.2| hypothetical protein POPTR_0012s13290g [Popu...   273   7e-71
gb|EXC15972.1| E3 ubiquitin-protein ligase COP1 [Morus notabilis]     272   2e-70
ref|XP_006401846.1| hypothetical protein EUTSA_v10015606mg [Eutr...   271   3e-70
ref|XP_001782967.1| predicted protein [Physcomitrella patens] gi...   269   1e-69
gb|EOY21331.1| Transducin/WD40 repeat-like superfamily protein [...   269   2e-69
ref|XP_006351197.1| PREDICTED: WD repeat-containing protein RUP2...   266   8e-69
gb|EMJ20682.1| hypothetical protein PRUPE_ppa022067mg [Prunus pe...   265   3e-68
ref|XP_004249856.1| PREDICTED: protein SPA1-RELATED 3-like [Sola...   263   9e-68
ref|XP_002872071.1| nucleotide binding protein [Arabidopsis lyra...   263   1e-67
ref|NP_568435.2| WD repeat-containing protein RUP2 [Arabidopsis ...   262   2e-67
ref|XP_006394637.1| hypothetical protein EUTSA_v10005519mg [Eutr...   261   3e-67
gb|AAM64761.1| contains similarity to photomorphogenesis repress...   258   3e-66

>ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 382

 Score =  287 bits (734), Expect = 6e-75
 Identities = 164/339 (48%), Positives = 206/339 (60%), Gaps = 29/339 (8%)
 Frame = +1

Query: 1    IGTMAFDESSQWLATGGMARKIRIYSFDKSLLN-------------------MDQMICTP 123
            IG + FD S   +ATGG+ARKIR+YS  KSLL                     D  I TP
Sbjct: 58   IGVIEFDPSDNLVATGGIARKIRVYSV-KSLLPGENHSHGEHNVKLLQHNNACDYYIWTP 116

Query: 124  AKLSSIRYDPTTSN-VVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHNM 300
            AKLSS+R+ P +S  V+G GDYDGVVTE+D++R + I ERDEHGGRR+WS+DYSH    +
Sbjct: 117  AKLSSLRWKPGSSGRVLGSGDYDGVVTEYDLDRKIPIFERDEHGGRRIWSVDYSHWNPFV 176

Query: 301  CSSSSDDGTVQIWDRSSPGTVMVI---PSPSLRAVCCAE---FGDYLIAMACSDSGVYVQ 462
             +S SDDGT+Q+WD    GT  V    PS    AVCC E   FG  L+A+ C+D   Y  
Sbjct: 177  GASGSDDGTIQMWDPRCEGTTNVAKVRPSAGGGAVCCVEFNPFGGPLVAVGCADRRAYGY 236

Query: 463  DIRKVISHGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISSGS 642
            D+RK++            P L  F GH +P +YVRF+D+ M+ +S  DG + LW++    
Sbjct: 237  DVRKMVD-----------PVLI-FDGHQKPVTYVRFLDEHMMVTSGTDGCLRLWSMHDAR 284

Query: 643  EDPVRTFRGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTHEL--CSSEN 816
               +R + GH N RNFVGLSVW  GGL  CGSE+N VFVYD RWS P+W HE    S + 
Sbjct: 285  --MIRVYMGHMNTRNFVGLSVWRTGGLLGCGSENNHVFVYDKRWSEPIWVHEFGGGSRDG 342

Query: 817  GDLCFVSGVCWREKPNE-CTLVAANSLGMLQVIVGERRA 930
             D  FVS VCWR+   + CTLVA  S G LQVI+G+RRA
Sbjct: 343  CDPKFVSSVCWRQVGKDVCTLVAGGSDGSLQVILGKRRA 381


>ref|XP_006490375.1| PREDICTED: WD repeat-containing protein RUP2-like [Citrus sinensis]
          Length = 366

 Score =  283 bits (725), Expect = 6e-74
 Identities = 159/334 (47%), Positives = 201/334 (60%), Gaps = 25/334 (7%)
 Frame = +1

Query: 1   IGTMAFDESSQWLATGGMARKIRIYSFDKSLLN------------MDQMICTPAKLSSIR 144
           IG + FD S    ATGG+ARKIRIY+    L++             D  ICTPAKLSS++
Sbjct: 45  IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104

Query: 145 YDPTTSN-VVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHNMCSSSSDD 321
           + P TS  V+G GDYDGVV E+D+E+ V I ERDEHGGRRVWS+DYS     + +S SDD
Sbjct: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164

Query: 322 GTVQIWDRSSPG---TVMVIPSPSLRAVCCAE---FGDYLIAMACSDSGVYVQDIRKVIS 483
           GT+Q+WD    G     MV PS S  AVCC E   FG  L+A  C+D   Y  D+RK++ 
Sbjct: 165 GTMQMWDPRCDGGKCVSMVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224

Query: 484 HGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISSGSEDPVRTF 663
                      P L  F GH +  +Y+RF+D   L ++  DG + LWN++      +RT+
Sbjct: 225 -----------PVLV-FDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR--VIRTY 270

Query: 664 RGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTHEL-----CSSENGDLC 828
           +GH N RNFVGLSVW  GGL  CGSE+N+VFVYD RW  PVW H+        SE G   
Sbjct: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG--- 327

Query: 829 FVSGVCWRE-KPNECTLVAANSLGMLQVIVGERR 927
           FVS VCWR    +ECTLVA  S G+L V VG+++
Sbjct: 328 FVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKKK 361


>ref|XP_006421902.1| hypothetical protein CICLE_v10005222mg [Citrus clementina]
           gi|557523775|gb|ESR35142.1| hypothetical protein
           CICLE_v10005222mg [Citrus clementina]
          Length = 366

 Score =  281 bits (719), Expect = 3e-73
 Identities = 158/334 (47%), Positives = 200/334 (59%), Gaps = 25/334 (7%)
 Frame = +1

Query: 1   IGTMAFDESSQWLATGGMARKIRIYSFDKSLLN------------MDQMICTPAKLSSIR 144
           IG + FD S    ATGG+ARKIRIY+    L++             D  ICTPAKLSS++
Sbjct: 45  IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104

Query: 145 YDPTTSN-VVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHNMCSSSSDD 321
           + P TS  V+G GDYDGVV E+D+E+ V I ERDEHGGRRVWS+DYS     + +S SDD
Sbjct: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164

Query: 322 GTVQIWDRSSPG---TVMVIPSPSLRAVCCAE---FGDYLIAMACSDSGVYVQDIRKVIS 483
           GT+Q+WD    G      V PS S  AVCC E   FG  L+A  C+D   Y  D+RK++ 
Sbjct: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224

Query: 484 HGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISSGSEDPVRTF 663
                      P L  F GH +  +Y+RF+D   L ++  DG + LWN++      +RT+
Sbjct: 225 -----------PVLV-FDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR--VIRTY 270

Query: 664 RGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTHEL-----CSSENGDLC 828
           +GH N RNFVGLSVW  GGL  CGSE+N+VFVYD RW  PVW H+        SE G   
Sbjct: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG--- 327

Query: 829 FVSGVCWRE-KPNECTLVAANSLGMLQVIVGERR 927
           FVS VCWR    +ECTLVA  S G+L V VG+++
Sbjct: 328 FVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKKK 361


>ref|XP_001756425.1| predicted protein [Physcomitrella patens]
           gi|162692464|gb|EDQ78821.1| predicted protein
           [Physcomitrella patens]
          Length = 329

 Score =  279 bits (713), Expect = 2e-72
 Identities = 152/337 (45%), Positives = 210/337 (62%), Gaps = 29/337 (8%)
 Frame = +1

Query: 1   IGTMAFDESSQWLATGGMARKIRIYSFDK------SLLNMD------QMICTPAKLSSIR 144
           IGT+AF+++ ++ ATGG+ARKIR+Y++        S +++D      Q +CTPAKLSS++
Sbjct: 6   IGTIAFEKTHEYFATGGIARKIRVYAYSPLVSGLTSAIDIDHARCCVQEVCTPAKLSSLQ 65

Query: 145 YDPTTSNVVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHNMCSSSSDDG 324
           +     NV+ CGDYDGVV EWDVER   I ERDE+GG+R+WSIDYS  F ++ +S+SDDG
Sbjct: 66  WHQERPNVIACGDYDGVVAEWDVERMCAICERDENGGQRIWSIDYSKDFPDLIASASDDG 125

Query: 325 TVQIWDRSSPGTVMVIPSPSLRAVCCAEFG---DYLIAMACSDSGVYVQDIRKVISHGGG 495
           TV++WD+SS  +V +I   +   +CCAEFG     LIA+A +DS VY+ D R + +    
Sbjct: 126 TVRMWDQSSEQSVAIIFHSTFSPICCAEFGPASSSLIALASADSNVYLYDTRWLSTP--- 182

Query: 496 GDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISSGS----------- 642
                    L +   H R  SYVRF+D   L SS+ID S+ LW++ S S           
Sbjct: 183 ---------LLTLAHHKRATSYVRFLDSHRLVSSSIDSSVKLWDVQSMSCSSCRTAPVAS 233

Query: 643 ---EDPVRTFRGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTHELCSSE 813
                PV++F  H N RNF GLSV    GL ACGSE+N+ FVYD +  +P+ +H      
Sbjct: 234 QRCNAPVKSFDSHYNVRNFTGLSVRGEDGLIACGSETNQAFVYDSQKCSPILSHSF-DYY 292

Query: 814 NGDLCFVSGVCWREKPNECTLVAANSLGMLQVIVGER 924
           N  +  VS VCWR KP++CTLVAANS G+L+++ G R
Sbjct: 293 NPAVLIVSAVCWRAKPDDCTLVAANSDGVLRLLSGNR 329


>ref|XP_002321910.2| hypothetical protein POPTR_0015s13210g, partial [Populus
           trichocarpa] gi|550322626|gb|EEF06037.2| hypothetical
           protein POPTR_0015s13210g, partial [Populus trichocarpa]
          Length = 382

 Score =  277 bits (709), Expect = 5e-72
 Identities = 149/320 (46%), Positives = 201/320 (62%), Gaps = 18/320 (5%)
 Frame = +1

Query: 1   IGTMAFDESSQWLATGGMARKIRIYSFDKSLLN------MDQMICTPAKLSSIRYDPTTS 162
           +G + FD+++  +ATGG+ARKIRIYS +  L +       D  ICTPAKLSS R+ P + 
Sbjct: 60  LGVIEFDQTNSIIATGGIARKIRIYSLESLLPHENHARARDYYICTPAKLSSFRWKPRSD 119

Query: 163 N-VVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHNMCSSSSDDGTVQIW 339
             V+G  DYDGVV E+++ER + I ERDEHGGRRVWS+DYSH    M +S SDDGT+Q+W
Sbjct: 120 GRVLGSEDYDGVVMEYNLERRIPIFERDEHGGRRVWSVDYSHCDPTMGASGSDDGTMQMW 179

Query: 340 D-RSSPGTVMVIPSPSLR--AVCCAEFGDY---LIAMACSDSGVYVQDIRKVISHGGGGD 501
           D RS  G  +    PS+R  AVCC EF  +   ++A+ C+D  VY  D+R +        
Sbjct: 180 DTRSESGECVATVQPSVRRSAVCCVEFNPFGGPIVAIGCADRKVYGYDLRMMADP----- 234

Query: 502 GVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISSGSEDPVRTFRGHKNQ 681
                  ++   GH +  +Y++F+D+  L S++IDG + LWN  S + + +RT+ GH N 
Sbjct: 235 -------VFVLDGHRKTVTYIKFLDNATLVSASIDGCLKLWN--SDNSNVIRTYHGHVNN 285

Query: 682 RNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTHE----LCSSENGDLCFVSGVCW 849
           RNFVGLSVW  GGL  CGSE+N+VFVYD RWS PVW HE    +   +     FVS VCW
Sbjct: 286 RNFVGLSVWRNGGLLGCGSENNKVFVYDKRWSEPVWVHESSSPIMGKDGRGSGFVSSVCW 345

Query: 850 RE-KPNECTLVAANSLGMLQ 906
           R+   ++CTLV   S G+LQ
Sbjct: 346 RQVGEDQCTLVTGGSDGILQ 365


>ref|XP_004309213.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Fragaria vesca
            subsp. vesca]
          Length = 385

 Score =  276 bits (707), Expect = 8e-72
 Identities = 157/337 (46%), Positives = 201/337 (59%), Gaps = 27/337 (8%)
 Frame = +1

Query: 1    IGTMAFDESSQWLATGGMARKIRIYSFDKSLLN---------------MDQMICTPAKLS 135
            +G + FD S   LATGG+ARKIRIYS    + N                D  ICTPAKLS
Sbjct: 60   LGVIEFDPSETLLATGGIARKIRIYSVSSLIPNNNNYDDVVSLDHAAACDYYICTPAKLS 119

Query: 136  SIRYDPTTSN-VVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHNMCSSS 312
            S+R+ P +   V+G GDYDGVVTE+D+E  + + ERDEHGGRRVWS+DY+     + +S 
Sbjct: 120  SLRWRPGSGGRVLGSGDYDGVVTEYDLESRLPVFERDEHGGRRVWSLDYNSDPGCLGASG 179

Query: 313  SDDGTVQIWD-RSSPG--TVMVIPSPSLRAVCCAE---FGDYLIAMACSDSGVYVQDIRK 474
            SDDGT+Q+WD R   G     V+PS +   VCC E   FG  L+A+ C+D   YV D R+
Sbjct: 180  SDDGTLQMWDPRCEAGECVARVVPSEAGNPVCCVEFNPFGGPLLAVGCADRKAYVYDARR 239

Query: 475  VISHGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISSGSEDPV 654
            +             P L SF GH +  +YVRF+D   + SS  DG + +W++    E  +
Sbjct: 240  MSG-----------PVL-SFDGHDKTVTYVRFLDSRRMVSSGTDGCLKMWSVEDARE--I 285

Query: 655  RTFRGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTH---ELCSSENGDL 825
            RT+ GH N R+FVGLSVW  GGL  CGSE+N+V+VYD RW  PVW H    + S    D 
Sbjct: 286  RTYSGHANNRSFVGLSVWRSGGLLGCGSENNQVYVYDVRWGEPVWVHGFGPMGSEGCDDR 345

Query: 826  CFVSGVCWREKPNE--CTLVAANSLGMLQVIVGERRA 930
             FVS VCWR+K  E  CTLVA  S G+LQV VG R++
Sbjct: 346  WFVSSVCWRQKDGEDQCTLVAGGSDGVLQVFVGRRKS 382


>ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
            gi|223531761|gb|EEF33581.1| ubiquitin ligase protein
            cop1, putative [Ricinus communis]
          Length = 426

 Score =  276 bits (707), Expect = 8e-72
 Identities = 156/338 (46%), Positives = 203/338 (60%), Gaps = 29/338 (8%)
 Frame = +1

Query: 1    IGTMAFDESSQWLATGGMARKIRIYSFDKSLLNMDQM-------------------ICTP 123
            +G + FD+S   +ATGG+ARKIRIYS  KSLL  +Q                    ICTP
Sbjct: 100  LGVIEFDQSENIVATGGIARKIRIYSI-KSLLPQEQQHENGNDIALMDHVNACEFFICTP 158

Query: 124  AKLSSIRYDPTTSN-VVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHNM 300
            AKLSS+R+ P +   V+G GDYDGVV E+DVE  + I ERDEHGGRR+WS+DYSH    +
Sbjct: 159  AKLSSLRWKPCSGGRVIGSGDYDGVVMEYDVETRIPIFERDEHGGRRIWSVDYSHWSPVV 218

Query: 301  CSSSSDDGTVQIWDRSSPG-----TVMVIPSPSLRAVCCAE---FGDYLIAMACSDSGVY 456
             +S SDDGT+Q+WD    G     TV    + S RAVC  E   FG  +IA+ C+D  VY
Sbjct: 219  GASGSDDGTMQMWDPRHEGGGCVATVKPSVTSSCRAVCSVEFNPFGGSIIAVGCADRRVY 278

Query: 457  VQDIRKVISHGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISS 636
              D+R + +             ++   GH +  +YVRF+D+G LAS+ IDG + LWN+  
Sbjct: 279  GYDVRMITNP------------VFVLDGHKKTVTYVRFMDNGTLASAGIDGCLKLWNLQ- 325

Query: 637  GSEDPVRTFRGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTHELCSSEN 816
                 +RT++GH N RNFVGLSVW  GGL  CGSE+N+VFVYD RWS P+W +   S   
Sbjct: 326  -DSQLLRTYKGHLNSRNFVGLSVWRNGGLLGCGSENNQVFVYDKRWSEPIWAYG--SGPA 382

Query: 817  GDLCFVSGVCWRE-KPNECTLVAANSLGMLQVIVGERR 927
             D  FV+ VCW +   + CTLV   S G+LQV  G+R+
Sbjct: 383  ADHGFVNSVCWSQVGEDRCTLVTGGSNGVLQVFEGKRK 420


>ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 383

 Score =  274 bits (701), Expect = 4e-71
 Identities = 155/340 (45%), Positives = 202/340 (59%), Gaps = 30/340 (8%)
 Frame = +1

Query: 1    IGTMAFDESSQWLATGGMARKIRIYSFDKSLLN-------------------MDQMICTP 123
            IG + FD S   + TGG+ARKIR+YS  KS L+                    D  +CTP
Sbjct: 58   IGIIEFDPSDNLVVTGGIARKIRVYSI-KSFLSDENHSHGERKVTWLQHNDACDYYVCTP 116

Query: 124  AKLSSIRYDP-TTSNVVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHNM 300
            AKLSS+R+ P +   V+G GDYDGVVTE+D+++ + I ERDEHGGRR+WS+DYSH    +
Sbjct: 117  AKLSSLRWKPGSAGRVLGSGDYDGVVTEYDLDQKIPIFERDEHGGRRIWSVDYSHWDPFV 176

Query: 301  CSSSSDDGTVQIWDRSSPG---TVMVIPSPSLRAVCCAE---FGDYLIAMACSDSGVYVQ 462
             +S SDDGT+Q+WD    G      V PS    AVCC E   FG  LIA+ C+D   Y  
Sbjct: 177  GASGSDDGTMQMWDPRCEGIKNVAKVRPSGGGSAVCCVEFNPFGGPLIAVGCADRRAYGY 236

Query: 463  DIRKVISHGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISSGS 642
            D+RK++            P L  F GH +  +YVRF+D   + +S  DG + LW++    
Sbjct: 237  DVRKMVD-----------PVLI-FDGHQKTVTYVRFLDQHTMVTSGTDGCLRLWSMHDAR 284

Query: 643  EDPVRTFRGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTHE--LCSSEN 816
               +R + GH N R+FVGLSVW  GGL  CGSE+N VFVYD RW  P+W HE  + S + 
Sbjct: 285  --MIRVYMGHMNTRSFVGLSVWRTGGLLGCGSENNHVFVYDKRWGEPIWVHEFGVGSRDG 342

Query: 817  GDLCFVSGVCWREKPNE--CTLVAANSLGMLQVIVGERRA 930
             D  FVS VCWR+   E  CTLVA  S G+L+VIVG+++A
Sbjct: 343  RDPNFVSSVCWRQVGGEDGCTLVAGGSDGILEVIVGKKKA 382


>ref|XP_002318819.2| hypothetical protein POPTR_0012s13290g [Populus trichocarpa]
            gi|550327039|gb|EEE97039.2| hypothetical protein
            POPTR_0012s13290g [Populus trichocarpa]
          Length = 390

 Score =  273 bits (699), Expect = 7e-71
 Identities = 156/340 (45%), Positives = 208/340 (61%), Gaps = 30/340 (8%)
 Frame = +1

Query: 1    IGTMAFDESSQWLATGGMARKIRIYSFDKSLLN-------------------MDQMICTP 123
            +G + FD+++  +ATGG+ARKIRIY+F KSL                      D  ICTP
Sbjct: 67   LGVIEFDQTNSIIATGGIARKIRIYNF-KSLFAHENTSQNAHEITCLDHARACDYYICTP 125

Query: 124  AKLSSIRYDPTTSN-VVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHNM 300
            AKLSSIR+ P++   V+G GDYDGVV E+ +ER + I ERDEHGGRRVWS+DYSH    +
Sbjct: 126  AKLSSIRWKPSSDGRVLGSGDYDGVVMEYCLERRIPIFERDEHGGRRVWSVDYSHWDPVL 185

Query: 301  CSSSSDDGTVQIWD---RSSPGTVMVIPSPSLRAVCCAE---FGDYLIAMACSDSGVYVQ 462
             +S SDDGT+Q+WD    S  G   V P     AVCC E   FG  ++A+ C+D  VY  
Sbjct: 186  GASGSDDGTMQMWDTRCESGEGVATVQPGVGRSAVCCVEFNPFGGPIVAVGCADRRVYGY 245

Query: 463  DIRKVISHGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISSGS 642
            DIR        GD V  L       GH +  +Y++F+D+  L S++IDG + LW+  S +
Sbjct: 246  DIRMT------GDPVFVL------DGHRKTVTYIKFLDNVTLVSASIDGCLKLWD--SDN 291

Query: 643  EDPVRTFRGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTHELCSSENGD 822
             + +R+++GH N R+F+GLSVW  GGL  CGSE+N+VFVYD RW  P+W HE  +    D
Sbjct: 292  SNVIRSYKGHVNSRSFIGLSVWRNGGLLGCGSENNKVFVYDRRWGEPIWVHE-SNPVGRD 350

Query: 823  LC---FVSGVCWRE-KPNECTLVAANSLGMLQVIVGERRA 930
             C   FVS VCWR+ + ++CTLVA  S G LQV  G R++
Sbjct: 351  GCGGGFVSSVCWRQVEEDQCTLVAGGSDGDLQVFQGRRKS 390


>gb|EXC15972.1| E3 ubiquitin-protein ligase COP1 [Morus notabilis]
          Length = 396

 Score =  272 bits (695), Expect = 2e-70
 Identities = 159/342 (46%), Positives = 200/342 (58%), Gaps = 33/342 (9%)
 Frame = +1

Query: 1    IGTMAFDESSQWLATGGMARKIRIYSF---------------DKSLLN----MDQMICTP 123
            +G + F  S + LATGG+ARKIRIY F               D +LL+     D  ICTP
Sbjct: 67   LGVIEFGPSGELLATGGIARKIRIYRFSSLVAAASDADGGGGDVALLDHASAYDYYICTP 126

Query: 124  AKLSSIRYDPTTSN-VVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHL--FH 294
            AKLSS+R+ P     ++G GDYDGVVTE+D+ER   + ERDEHGGRRVWS+DYSH     
Sbjct: 127  AKLSSLRWRPGAGGRIIGSGDYDGVVTEYDLERRTPVFERDEHGGRRVWSVDYSHWEGCS 186

Query: 295  NMCSSSSDDGTVQIWD-RSSPGTVMVIPSPSLR---AVCCAEFGDY---LIAMACSDSGV 453
             M +S SDDGT+Q+WD R   G  +    PS     +VCC EF  +   L+A+ C+D   
Sbjct: 187  VMAASGSDDGTMQMWDPRCDGGECVATVRPSATKTSSVCCVEFNPFGGPLVAVGCADRKA 246

Query: 454  YVQDIRKVISHGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNIS 633
            Y  D+RK+       D V  L       GH +  +YVRF+DD  + SS  DG + LWNI 
Sbjct: 247  YGYDVRKL------SDPVLILD------GHQKTVTYVRFLDDRTMVSSGTDGCLKLWNID 294

Query: 634  SGSEDPVRTFRGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTH--ELCS 807
                  VRT++GH N R+FVGLSVW  GGL  CGSE+N+VFVYD RW  P+W    E   
Sbjct: 295  DARA--VRTYKGHVNNRSFVGLSVWRKGGLLGCGSENNQVFVYDKRWGEPIWVRGFEPTG 352

Query: 808  SENGDLCFVSGVCWRE--KPNECTLVAANSLGMLQVIVGERR 927
                +  FVS VCWR+  + +ECTLVA  S G LQV VG R+
Sbjct: 353  ESGCERGFVSSVCWRQVGEEDECTLVAGGSDGALQVFVGTRK 394


>ref|XP_006401846.1| hypothetical protein EUTSA_v10015606mg [Eutrema salsugineum]
            gi|557102936|gb|ESQ43299.1| hypothetical protein
            EUTSA_v10015606mg [Eutrema salsugineum]
          Length = 400

 Score =  271 bits (693), Expect = 3e-70
 Identities = 151/324 (46%), Positives = 200/324 (61%), Gaps = 16/324 (4%)
 Frame = +1

Query: 1    IGTMAFDESSQWLATGGMARKIRIYSFDKSLLNMDQ-------MICTPAKLSSIRYDPTT 159
            IG + FD S + LATGG+ARKIR Y     L N D         ICTPAKLSS+++ P  
Sbjct: 89   IGAIEFDPSGEILATGGIARKIRSYRLASLLRNDDDDHVVEESCICTPAKLSSLKWRPDL 148

Query: 160  SN-VVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHNMCSSS-SDDGTVQ 333
            S  V+G GDYDGVVTE+DVE+GV + ERDEHGGRR+WS+DY+    ++  +S SDDGT Q
Sbjct: 149  SGRVIGSGDYDGVVTEYDVEKGVPVFERDEHGGRRIWSVDYTLQNGSVIGASGSDDGTFQ 208

Query: 334  IWDRSSPGTVMVI-PSPSLRAVCCAEF---GDYLIAMACSDSGVYVQDIRKVISHGGGGD 501
            +WD  + G+   + P     A+C  EF   G Y +A+ C+D   YV DIR+++      D
Sbjct: 209  MWDPRNGGSEETVRPGGGTAAICSVEFDPFGGYFLAVGCADRNAYVYDIRRLV------D 262

Query: 502  GVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISSGSEDPVRTFRGHKNQ 681
             V  L       GHT+  +Y RF+D   + + + DGS+ LW++++G    VRT RGH N 
Sbjct: 263  PVVVLD------GHTKTVTYARFMDQRTIVTGSTDGSLKLWDVANGGR-VVRTCRGHVNS 315

Query: 682  RNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTHELCSSE--NGDLCFVSGVCWRE 855
            RNFVGLSVW  GGL   GSE+N+VFVYD RW  PVW + L  ++    D  FVS VCWR+
Sbjct: 316  RNFVGLSVWGQGGLVVSGSENNQVFVYDKRWEEPVWVYGLGQTDRFESDRRFVSSVCWRQ 375

Query: 856  KPNE-CTLVAANSLGMLQVIVGER 924
               + CTLVA  S G+L++   +R
Sbjct: 376  VDEDLCTLVAGGSDGVLEIFSVQR 399


>ref|XP_001782967.1| predicted protein [Physcomitrella patens] gi|162665532|gb|EDQ52213.1|
            predicted protein [Physcomitrella patens]
          Length = 469

 Score =  269 bits (688), Expect = 1e-69
 Identities = 156/373 (41%), Positives = 213/373 (57%), Gaps = 65/373 (17%)
 Frame = +1

Query: 1    IGTMAFDESSQWLATGGMARKIRIYSFDKSLLNMD------------------------- 105
            IGT+AF++++++ ATGG+ARKIR+YS+ + +  +                          
Sbjct: 104  IGTIAFEKTNEYFATGGIARKIRVYSYSQLVSGVSSTYEDEDEDEDEEESLDYLKQRRLR 163

Query: 106  ----------------QMICTPAKLSSIRYDPTTSNVVGCGDYDGVVTEWDVERGVGISE 237
                            Q +CTPAKLSS+++     N++ CGDYDGVV EWD+ER   ISE
Sbjct: 164  KRRASTSEIDHARCCVQEVCTPAKLSSLQWYQERPNLIACGDYDGVVAEWDLERNCTISE 223

Query: 238  RDEHGGRRVWSIDYSHLFHNMCSSSSDDGTVQIWDRSSPGTVMVIPSPSLRAVCCAEFG- 414
            RDE+GG+R+WSIDYS  F N+ +S+SDDGTV+IWDR+S  +  ++  P+   +CCAEFG 
Sbjct: 224  RDENGGQRIWSIDYSKDFPNLIASASDDGTVRIWDRNSEQSAAILSHPTYSPICCAEFGP 283

Query: 415  --DYLIAMACSDSGVYVQDIRKVISHGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGML 588
                LIA+A +DS VY+ D R + +             L +   H R ASYVRF+    L
Sbjct: 284  VSSSLIALASADSNVYLYDTRWLSTP------------LLTLAHHKRAASYVRFLTRHSL 331

Query: 589  ASSAIDGSIMLWNISSGS--------------EDPVRTFRGHKNQRNFVGLSVWSPGGLF 726
             SS+ID S+ LW+I+S S              +  V++F  H N RNF GLSV S GGL 
Sbjct: 332  VSSSIDSSVKLWDITSLSSTSERAASVIYQHCDTLVKSFGSHYNVRNFTGLSVRSEGGLI 391

Query: 727  ACGSESNEVFVYDYRWSTPVWTHEL-----CSSENGDL--CFVSGVCWREKPNECTLVAA 885
            ACGSE+N+ FVYD + S P+  H        S+ N  L    VS VCWR K N+CTLVAA
Sbjct: 392  ACGSETNQAFVYDSQTSNPILMHSFDYKPTSSNMNPILGSLIVSAVCWRTKSNDCTLVAA 451

Query: 886  NSLGMLQVIVGER 924
            NS G+L+V+ G +
Sbjct: 452  NSDGVLRVLSGSQ 464


>gb|EOY21331.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
          Length = 414

 Score =  269 bits (687), Expect = 2e-69
 Identities = 156/340 (45%), Positives = 204/340 (60%), Gaps = 31/340 (9%)
 Frame = +1

Query: 1    IGTMAFDESSQWLATGGMARKIRIYSFDKSLLNMDQM-------------------ICTP 123
            +G + FD S+  +ATGG+ARKIRIY+ + SLL  DQ                    ICTP
Sbjct: 89   LGVIEFDPSNTVVATGGIARKIRIYTLN-SLLPQDQSTQGEQNITFLDHVNACEYYICTP 147

Query: 124  AKLSSIRYDPTTSN-VVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHNM 300
            AKLSS+R+ P +   ++G GDYDGVV E+D+ER + I ERDEHGGRRVWS+DYSH    +
Sbjct: 148  AKLSSLRWKPGSGGRLLGSGDYDGVVMEYDLERKLPIFERDEHGGRRVWSVDYSHWDPFV 207

Query: 301  CSSSSDDGTVQIWD-RSSPG---TVMVIPSPSLRAVCCAE---FGDYLIAMACSDSGVYV 459
             +S S+DGT+Q+WD R   G      V P+ +  +VCC E   FG+ LIA  C+D   Y 
Sbjct: 208  GASGSEDGTMQMWDPRCGEGGGCVAKVQPALARSSVCCVEFDPFGEALIAAGCADRKAYT 267

Query: 460  QDIRKVISHGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISSG 639
             D+RK++              L+ + GHT+  +YVRF+D   + S+  DG + LWNIS  
Sbjct: 268  YDVRKMVEP------------LHVYDGHTKTVTYVRFLDAQTMVSAGTDGYLKLWNISDS 315

Query: 640  SEDPVRTFRGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTH---ELCSS 810
                +RT++GH N R+FVGLSVW  GGL   GSE+N+VFVYD RW  P+W H    L  +
Sbjct: 316  R--LIRTYKGHVNSRSFVGLSVWRHGGLLGSGSENNQVFVYDKRWGEPIWVHGFEPLGRA 373

Query: 811  ENGDLCFVSGVCWREKPNE-CTLVAANSLGMLQVIVGERR 927
               D  FVS V WR+   E CTLVA  S G+LQV VG R+
Sbjct: 374  GGRDHGFVSSVSWRQVHEEQCTLVAGGSNGVLQVFVGRRK 413


>ref|XP_006351197.1| PREDICTED: WD repeat-containing protein RUP2-like [Solanum tuberosum]
          Length = 370

 Score =  266 bits (681), Expect = 8e-69
 Identities = 148/346 (42%), Positives = 205/346 (59%), Gaps = 37/346 (10%)
 Frame = +1

Query: 1    IGTMAFDESSQWLATGGMARKIRIYSFDKSLLN----------------------MDQMI 114
            IG + FD    +LA+GG+ARKIRIY+  KSLL                        D  +
Sbjct: 43   IGVLEFDPCGNFLASGGIARKIRIYAV-KSLLQEREEGEKRTSTGAPLALDHGNACDFFM 101

Query: 115  CTPAKLSSIRYDPTTSN-VVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLF 291
            CTPAKL S+++ P     V+G GDYDGVV E+D+E+ + + ERDEHGGRRVWSIDY H  
Sbjct: 102  CTPAKLGSLKWKPGLGGRVLGSGDYDGVVMEYDLEKKMPVFERDEHGGRRVWSIDYCHSD 161

Query: 292  HNMCSSSSDDGTVQIWDR--SSPGTVMVIPSPSLR---AVCCAEFGDY---LIAMACSDS 447
              + +S SDDGT+Q+WD      G  + +  P+      VCC EF  +   ++A+ C+D 
Sbjct: 162  PVLGASGSDDGTMQMWDPRCGDNGKCLAMVQPTKEYSTPVCCVEFNPFKGPIVAVGCADR 221

Query: 448  GVYVQDIRKVISHGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWN 627
             VY  D+RK++              L+   GH +  +Y+RF+D+  + SS+IDG + +WN
Sbjct: 222  RVYAYDMRKMVDP------------LFILDGHQKAVTYIRFIDERTIISSSIDGCLKMWN 269

Query: 628  ISSGSEDPVRTFRGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTH---- 795
              +  +  +RT++GH N R FVGLS+W PGGL  CGSESN+VFVYD RW  P+W +    
Sbjct: 270  --AEDQKVLRTYKGHNNSRRFVGLSIWKPGGLICCGSESNQVFVYDKRWGEPIWVYGREP 327

Query: 796  -ELCSSENGDLCFVSGVCWREK-PNECTLVAANSLGMLQVIVGERR 927
              L   E+G   FVS VCW++K  N+CTLVA +S G+L+V  G+RR
Sbjct: 328  IGLTGIEHG---FVSSVCWQQKDENQCTLVAGDSDGVLRVFNGKRR 370


>gb|EMJ20682.1| hypothetical protein PRUPE_ppa022067mg [Prunus persica]
          Length = 380

 Score =  265 bits (676), Expect = 3e-68
 Identities = 153/339 (45%), Positives = 197/339 (58%), Gaps = 30/339 (8%)
 Frame = +1

Query: 1    IGTMAFDESSQWLATGGMARKIRIYSFDKSLLNMDQM---------------ICTPAKLS 135
            IG + FD S+  +ATGG+ARKIR+YSF+ SLL  D+                +CTPAKLS
Sbjct: 51   IGVIEFDPSNAVVATGGIARKIRVYSFN-SLLPSDRFCQANLLDHVTACAYTLCTPAKLS 109

Query: 136  SIRYDPTTSNVVGC-GDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHNMCSSS 312
            S+R+ P +   V C GDYDGVVTE+D+E  + I ERDEHGGRRVWS+DYSH    + +S 
Sbjct: 110  SLRWRPGSDGRVLCSGDYDGVVTEYDLETRLPIFERDEHGGRRVWSVDYSHSDPFLGASG 169

Query: 313  SDDGTVQIWDRSSPG---TVMVIPSPSLRAVCCAE---FGDYLIAMACSDSGVYVQDIRK 474
            SDDGT+Q+WD    G      V PS +   VCC E   FG  L+A+ C+D   Y  D+RK
Sbjct: 170  SDDGTLQMWDPRCDGGECVASVQPSKAGNPVCCLEFDPFGGALVAVGCADRRAYGYDMRK 229

Query: 475  VISHGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISSGSEDPV 654
            ++            P L  F GH +  +YVRF+D   + ++  DG + LW      E  +
Sbjct: 230  MVD-----------PVLV-FDGHRKTVTYVRFIDGCTVVTAGTDGCLKLWGTEDSRE--I 275

Query: 655  RTFRGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTHELCSSENG----- 819
            RT++GH N R+FVGLSVW  G L  CGSE N V+VYD RW  P+W H   +   G     
Sbjct: 276  RTYKGHTNNRSFVGLSVWRNGKLIGCGSEDNRVYVYDKRWGEPIWLHGFGAVGEGSSGGC 335

Query: 820  --DLCFVSGVCWREKPNE-CTLVAANSLGMLQVIVGERR 927
              +L FVS VCWR+   E CTL+A  S G LQV  G R+
Sbjct: 336  DEELGFVSSVCWRQVGEEQCTLIAGGSDGDLQVFSGRRK 374


>ref|XP_004249856.1| PREDICTED: protein SPA1-RELATED 3-like [Solanum lycopersicum]
          Length = 360

 Score =  263 bits (672), Expect = 9e-68
 Identities = 149/336 (44%), Positives = 203/336 (60%), Gaps = 27/336 (8%)
 Frame = +1

Query: 1   IGTMAFDESSQWLATGGMARKIRIYSFDKSLLN----------------MDQMICTPAKL 132
           IG + FD    +LA+GG+ARKIRIY+  KS+                   D  ICTPAKL
Sbjct: 43  IGVLEFDPCGNFLASGGIARKIRIYTV-KSVQGERRIGDAPLALDHSNACDFFICTPAKL 101

Query: 133 SSIRYDPTT-SNVVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHNMCSS 309
            SI++ P   S V+G GDYDGVV E+D+E+ + + ERDEHGGRRVWSIDY      + +S
Sbjct: 102 GSIKWKPGLGSRVLGSGDYDGVVMEYDLEKKMPVFERDEHGGRRVWSIDYCQSDPVLGAS 161

Query: 310 SSDDGTVQIWD----RSSPGTVMVIPSPSLRA-VCCAEFGDY---LIAMACSDSGVYVQD 465
            SDDGT+Q+WD     S     MV P+      VCC EF  +   ++A+ C+D  VY  D
Sbjct: 162 GSDDGTMQMWDPRCGDSGKCLAMVQPTKGYSTPVCCVEFNPFKGPIVAVGCADRRVYAYD 221

Query: 466 IRKVISHGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISSGSE 645
           +RK++              L+   GH +  +Y+RFVD+  + SS+IDG + +WN  +  +
Sbjct: 222 MRKMLDP------------LFVLDGHEKAVTYIRFVDERTIISSSIDGCLKMWN--AEDQ 267

Query: 646 DPVRTFRGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTH-ELCSSENGD 822
             +RT++GH N R FVGLSVW PGGL  CGSE+N+VFVYD RW  P+W +      E+G 
Sbjct: 268 KVLRTYKGHSNSRRFVGLSVWKPGGLICCGSENNQVFVYDKRWGEPIWMYGREPRHEHG- 326

Query: 823 LCFVSGVCWREK-PNECTLVAANSLGMLQVIVGERR 927
             FVS VCW++K  N+CTLVA +S G+L+V  G+R+
Sbjct: 327 --FVSSVCWQQKDENQCTLVAGDSDGVLRVFNGKRK 360


>ref|XP_002872071.1| nucleotide binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317908|gb|EFH48330.1| nucleotide binding protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score =  263 bits (671), Expect = 1e-67
 Identities = 155/341 (45%), Positives = 199/341 (58%), Gaps = 32/341 (9%)
 Frame = +1

Query: 1    IGTMAFDESSQWLATGGMARKIRIY----------------SFDKSLLNMDQMICTPAKL 132
            IG + FD +   +AT G++RKIR Y                SF       +  ICTPAKL
Sbjct: 40   IGAIEFDPTDNIVATAGISRKIRFYGLPSLLRTNAVSGTGVSFVDQATACEYYICTPAKL 99

Query: 133  SSIRYDPTT-SNVVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHNMCS- 306
            SS+R+ P + S V+G GDYDGVVTE+D+E+   + ERDEHGGRRVWS+DY+   H   S 
Sbjct: 100  SSLRWRPGSGSRVIGSGDYDGVVTEYDLEKRTPVFERDEHGGRRVWSVDYTR--HGDASA 157

Query: 307  ---SSSDDGTVQIWDRSSP---GTVMVIPSPSLR-AVCCAEF---GDYLIAMACSDSGVY 456
               S SDDGT+Q+WD   P      +V PS   R AVCC EF   G   +A+ C+D   Y
Sbjct: 158  VGASGSDDGTMQVWDPRCPPEESVSVVRPSGICRSAVCCVEFDPSGGPTVAVGCADRKGY 217

Query: 457  VQDIRKVISHGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISS 636
            V DIRK++      D   TL      +GHT+  SYVRF+D   + ++  DG + LW++  
Sbjct: 218  VYDIRKLV------DPALTL------QGHTKTVSYVRFLDGCTVVTAGTDGCLKLWSVED 265

Query: 637  GSEDPVRTFRGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWT---HELCS 807
            G    +RT+ GH N RNFVGLSVW  G LF CGSE+N VFVYD RW  PVW      +  
Sbjct: 266  GRV--IRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWGKPVWVDGFEPVGM 323

Query: 808  SENGDLCFVSGVCWREK-PNECTLVAANSLGMLQVIVGERR 927
            +   D  FVS VCWR+   ++CTLVA  S G+LQV VG+R+
Sbjct: 324  NSGSDKRFVSSVCWRQSGVDQCTLVAGGSDGVLQVYVGKRK 364


>ref|NP_568435.2| WD repeat-containing protein RUP2 [Arabidopsis thaliana]
            gi|75333740|sp|Q9FFA7.1|RUP2_ARATH RecName: Full=WD
            repeat-containing protein RUP2; AltName: Full=Protein
            EARLY FLOWERING BY OVEREXPRESSION 2; AltName:
            Full=Protein EPRESSOR OF UV-B PHOTOMORPHOGENESIS 2
            gi|10176840|dbj|BAB10046.1| unnamed protein product
            [Arabidopsis thaliana] gi|332005822|gb|AED93205.1| WD
            repeat-containing protein RUP2 [Arabidopsis thaliana]
          Length = 368

 Score =  262 bits (670), Expect = 2e-67
 Identities = 155/341 (45%), Positives = 200/341 (58%), Gaps = 32/341 (9%)
 Frame = +1

Query: 1    IGTMAFDESSQWLATGGMARKIRIYSFDKSLLN----------MDQM------ICTPAKL 132
            IG + FD +   +AT G++RKIR Y     L N          +DQ       ICTPAKL
Sbjct: 43   IGAIEFDPTDNIVATAGISRKIRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPAKL 102

Query: 133  SSIRYDPTTSN-VVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHNMCS- 306
            SS+R+ P +   V+G GDYDGVV E+D+E+   + ERDEHGGRRVWS+DY+   H   S 
Sbjct: 103  SSLRWRPGSGGRVIGSGDYDGVVMEYDLEKRTPVFERDEHGGRRVWSVDYTR--HGGAST 160

Query: 307  ---SSSDDGTVQIWDRSSP---GTVMVIPSPSLR-AVCCAEF---GDYLIAMACSDSGVY 456
               S SDDGT+Q+WD   P      +V P+   R AVCC EF   G   +A+ C+D   Y
Sbjct: 161  VGASGSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGY 220

Query: 457  VQDIRKVISHGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISS 636
            V DIRK++      D   TL      +GHT+  SYVRF+D G + ++  DG + LW++  
Sbjct: 221  VYDIRKLV------DPALTL------QGHTKTVSYVRFLDGGTVVTAGTDGCLKLWSVED 268

Query: 637  GSEDPVRTFRGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWT---HELCS 807
            G    +RT+ GH N RNFVGLSVW  G LF CGSE+N VFVYD RW  PVW      +  
Sbjct: 269  GRV--IRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWGKPVWVDGFEPVGM 326

Query: 808  SENGDLCFVSGVCWREK-PNECTLVAANSLGMLQVIVGERR 927
            +   D  FVS VCWR+   ++CTLVA  S G+LQV VG+R+
Sbjct: 327  NSGSDKRFVSSVCWRQSGVDQCTLVAGGSDGVLQVYVGKRK 367


>ref|XP_006394637.1| hypothetical protein EUTSA_v10005519mg [Eutrema salsugineum]
            gi|557091276|gb|ESQ31923.1| hypothetical protein
            EUTSA_v10005519mg [Eutrema salsugineum]
          Length = 374

 Score =  261 bits (668), Expect = 3e-67
 Identities = 155/344 (45%), Positives = 203/344 (59%), Gaps = 35/344 (10%)
 Frame = +1

Query: 1    IGTMAFDESSQWLATGGMARKIRIY-------------------SFDKSLLNMDQMICTP 123
            IG + FD +   LAT G++RKIR Y                   SF       +  ICTP
Sbjct: 46   IGAIEFDPTDNILATAGISRKIRFYGLPSLLRANAGISGGGGGVSFVDHTTACEYYICTP 105

Query: 124  AKLSSIRYDPTTSN-VVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHN- 297
            AKLSS+R+ P +   V+G GDYDGVVTE+D+E+   + ERDEHGGRRVWS+DY+   H  
Sbjct: 106  AKLSSLRWRPGSGGRVIGSGDYDGVVTEYDLEKRTPVFERDEHGGRRVWSVDYTR--HGG 163

Query: 298  ---MCSSSSDDGTVQIWDRSSPG--TVMVI-PSPSLR-AVCCAEF---GDYLIAMACSDS 447
               + +S SDDGT+Q+WD   P   TV V+ P+   R AVCC EF   G   +A+ C+D 
Sbjct: 164  AAAVGASGSDDGTMQVWDPRCPPEETVGVVRPAGHCRSAVCCVEFDPSGGPAVAVGCADR 223

Query: 448  GVYVQDIRKVISHGGGGDGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWN 627
              YV D+RK++      D   TL      +GH++  SYVRF+D G + ++  DG + +W+
Sbjct: 224  RGYVYDMRKLV------DPALTL------QGHSKTVSYVRFLDGGTVVTAGTDGCLKMWS 271

Query: 628  ISSGSEDPVRTFRGHKNQRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWT---HE 798
            +  G    +RT+ GH N RNFVGLSVW  G LF CGSE+N VFVYD RW  PVW      
Sbjct: 272  VEDGCV--IRTYEGHVNSRNFVGLSVWRNGALFGCGSENNRVFVYDKRWGKPVWVDGYEP 329

Query: 799  LCSSENGDLCFVSGVCWREK-PNECTLVAANSLGMLQVIVGERR 927
            +  S   D  FVS VCWR+   ++CTLVAA S G+LQV VG+R+
Sbjct: 330  VGISSGSDKRFVSSVCWRQSGVDQCTLVAAGSDGVLQVYVGKRK 373


>gb|AAM64761.1| contains similarity to photomorphogenesis repressor protein
            [Arabidopsis thaliana]
          Length = 385

 Score =  258 bits (659), Expect = 3e-66
 Identities = 147/325 (45%), Positives = 195/325 (60%), Gaps = 17/325 (5%)
 Frame = +1

Query: 1    IGTMAFDESSQWLATGGMARKIRIYSFDKSLLNMDQ-------MICTPAKLSSIRYDPTT 159
            IG + FD + + +ATGG+ARKIR Y     L + D         ICTPAKLSS+++ P  
Sbjct: 74   IGAIEFDPTGEIIATGGIARKIRSYRLSSLLESRDDHVTASESCICTPAKLSSLKWRPDF 133

Query: 160  SN-VVGCGDYDGVVTEWDVERGVGISERDEHGGRRVWSIDYSHLFHN--MCSSSSDDGTV 330
            S  V+G GDYDGVVTE+DVE+ V +SERDEHGGRR+WS+DY+ L++   + +S SDDGTV
Sbjct: 134  SGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYT-LYNGSLLGASGSDDGTV 192

Query: 331  QIWDRSSPGTVMVIPSPSLRAVCCA----EFGDYLIAMACSDSGVYVQDIRKVISHGGGG 498
            Q+WD  + GT+     P   A  C+     FG   IA+ C+D   YV DIR+++      
Sbjct: 193  QMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADQNAYVYDIRRLVDP---- 248

Query: 499  DGVSTLPFLYSFKGHTRPASYVRFVDDGMLASSAIDGSIMLWNISSGSEDPVRTFRGHKN 678
                    L    GHT+  +Y RF+D   + + + DGS+  W+I +G    VRT+RGH N
Sbjct: 249  --------LIVLDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDIDNGRR-VVRTYRGHVN 299

Query: 679  QRNFVGLSVWSPGGLFACGSESNEVFVYDYRWSTPVWTHELCSSE--NGDLCFVSGVCWR 852
             RNFVGLSVW  GGL   GSE+N+VFVYD RW  PVW   L  +     D  FVS VC R
Sbjct: 300  SRNFVGLSVWRHGGLVVSGSENNQVFVYDKRWEEPVWVCGLGHTNRFGSDRRFVSSVCLR 359

Query: 853  EKPNE-CTLVAANSLGMLQVIVGER 924
            +   + CTLVA  S G L++  G++
Sbjct: 360  QVDEDWCTLVAGGSDGALEIFSGKQ 384