BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00020399
         (1475 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]     244   9e-62
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe...   239   3e-60
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi...   238   4e-60
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr...   238   5e-60
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   230   1e-57
ref|XP_002321639.2| pentatricopeptide repeat-containing family p...   229   2e-57
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   229   2e-57
ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [A...   226   1e-56
ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Caps...   224   6e-56
gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]       224   7e-56
ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containi...   224   7e-56
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   222   3e-55
gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus...   222   4e-55
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ...   221   5e-55
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi...   220   1e-54
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   220   1e-54
ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containi...   219   2e-54
ref|NP_190408.1| pentatricopeptide repeat-containing protein [Ar...   219   3e-54
ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutr...   213   2e-52
ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containi...   211   5e-52

>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
          Length = 628

 Score =  244 bits (622), Expect = 9e-62
 Identities = 127/356 (35%), Positives = 204/356 (57%), Gaps = 4/356 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW + EEMKG G+ L       ++ + ++    ED  KL+ +M +     P KP A +C
Sbjct: 282  EFWGMIEEMKGAGYDLDIDNYIKISRQFQKSKMMEDSVKLYEFMMDG----PFKPSAQDC 337

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
            +  L+ ++   +PD  LA+RV   +++    + K  YDG HR LT AGRF+EAEK+M  M
Sbjct: 338  NLLLRSISAGDNPDCSLAFRVAKKYESTGRTLSKAAYDGIHRSLTSAGRFDEAEKMMKVM 397

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
               G+ PDNITYSQL+FGLC A R ++AR+++ EM+  GC PD +TWTILI+ HC+A + 
Sbjct: 398  RNAGYEPDNITYSQLVFGLCKARRLEEARRVLDEMEANGCTPDIKTWTILIQGHCSAGEV 457

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            ++ L  F+KM+   C+ D  +++ ++     + ++  A+  + +++D+ +V P   TY  
Sbjct: 458  DKGLMCFMKMMEEDCNVDGDLLDVLIKGFLSQRKIKGAYDLLIELVDKARVIPWQATYKN 517

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLS----KAELS 890
            +I+K+ + + L+EA  +  LM +H + P   P    I+K G+VE+A EFL     K   S
Sbjct: 518  LIEKMLEVRKLEEAMNLLRLMKKHKYPPYHDPFVPYISKFGTVEEAAEFLKALSVKKNPS 577

Query: 891  AKRCVAMFYAFCNAGRKGDAHALLLRCPPELFHSYEISRMAKGISLENTQSSPQKA 1058
                  +F +F   GR  +A  LL +CP  +    +I+++       +TQSSP  A
Sbjct: 578  PSAYFHIFESFFREGRHSEAKDLLFKCPHHIRKHRDIAKL-----FGSTQSSPATA 628


>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
          Length = 646

 Score =  239 bits (609), Expect = 3e-60
 Identities = 125/340 (36%), Positives = 191/340 (56%), Gaps = 4/340 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW V EEMKG G  L   T   +  + ++    ED  KL+  M +     P KP A +C
Sbjct: 300  EFWSVIEEMKGAGHELDLDTYIKITRQFQKSKMMEDAVKLYELMMDG----PYKPSAQDC 355

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
            S  L+ ++    PD+D+ +RV   F++    + K +YDG HR LT AG F+EAEK+   M
Sbjct: 356  SMLLRSISANDKPDLDMVFRVAKKFESAGNTLSKAVYDGIHRSLTSAGSFDEAEKITKVM 415

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
               G+ PDNITYSQL+FGLC A R ++A K++ EM+  GC PD  TWTILI+ HC AN+ 
Sbjct: 416  RNAGYEPDNITYSQLVFGLCKAKRLEEACKVLDEMEANGCVPDIMTWTILIQGHCAANEV 475

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            +  L  F KM+  GC AD+ +++ ++    ++ ++  A+  + ++++  +++P   TY  
Sbjct: 476  DTALVCFAKMIEKGCDADADLLDVLINGFLKQRKIEGAYKLLIEMVNMTRLRPWQATYKN 535

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLS----KAELS 890
            +I+ L   + L EA  +  LM +  + P   P  + ++K GSVEDA EF      K   S
Sbjct: 536  LIENLLGVRKLDEAFALLHLMKKQSYPPYPDPFVQYLSKFGSVEDAAEFFKALSVKEYPS 595

Query: 891  AKRCVAMFYAFCNAGRKGDAHALLLRCPPELFHSYEISRM 1010
            +   V +F +F   GR  +A  LL +CP  +    EIS++
Sbjct: 596  SAAYVHVFKSFFKEGRDSEAKELLYKCPYHIRKLGEISKL 635


>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Citrus sinensis]
          Length = 639

 Score =  238 bits (608), Expect = 4e-60
 Identities = 128/359 (35%), Positives = 207/359 (57%), Gaps = 4/359 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            +FW V EEMK  G+ +   T   ++ + ++    ED  KLF +M +     P KP   +C
Sbjct: 284  DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG----PYKPSVQDC 339

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
            S  L+ ++   +PD+ L +RV + +++   ++ K +YDG HR LTK GRF+EAEK+M  M
Sbjct: 340  SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKIMKAM 399

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
               GF PDNITYSQ+IFGLC A   +DA  ++ EM+  GC PD ++WTILI+ HC AN+ 
Sbjct: 400  KNAGFEPDNITYSQVIFGLCKAGSFEDACNVLDEMEENGCIPDIKSWTILIQGHCAANEV 459

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            +R L  F KM+     AD+ +++ ++     + RV  A+  + ++I++ +++P   T+  
Sbjct: 460  DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLS----KAELS 890
            +I+KL  ++ L+EA  +  LM +  + P  +P  + I+K G+VEDA EFL     K   S
Sbjct: 520  LIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPS 579

Query: 891  AKRCVAMFYAFCNAGRKGDAHALLLRCPPELFHSYEISRMAKGISLENTQSSPQKAPSS 1067
            +   + +F +F N GR  +A  LL +CP  +    +IS +  G +  N  + P +  S+
Sbjct: 580  SAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS-LLFGSAKSNKVTIPSRKEST 637


>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
            gi|557542189|gb|ESR53167.1| hypothetical protein
            CICLE_v10019266mg [Citrus clementina]
          Length = 639

 Score =  238 bits (607), Expect = 5e-60
 Identities = 129/359 (35%), Positives = 206/359 (57%), Gaps = 4/359 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            +FW V EEMK  G+ +   T   ++ + ++    ED  KLF +M +     P KP   +C
Sbjct: 284  DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRIMEDAVKLFEFMMDG----PYKPSVQDC 339

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
            S  L+ ++   +PD+ L +RV + +++   ++ K +YDG HR LTK GRF+EAEK+M  M
Sbjct: 340  SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM 399

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
               GF PDNITYSQ+IFGLC A R +DA  ++ EM+  GC PD +TWTILI+ HC AN+ 
Sbjct: 400  KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            +R L  F KM+     AD+ +++ ++     + RV  A+  + ++I++  ++P   T+  
Sbjct: 460  DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVHLRPWQATFKT 519

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLS----KAELS 890
            +I+KL  ++ L+EA  +  LM +  + P  +P  + I+K G+ EDA EFL     K   S
Sbjct: 520  LIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTAEDASEFLKALSVKEYPS 579

Query: 891  AKRCVAMFYAFCNAGRKGDAHALLLRCPPELFHSYEISRMAKGISLENTQSSPQKAPSS 1067
            +   + +F +F N GR  +A  LL +CP  +    +IS +  G +  N  + P +  S+
Sbjct: 580  SAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS-LLFGSAKSNKVTIPSRKEST 637


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  230 bits (587), Expect = 1e-57
 Identities = 118/340 (34%), Positives = 192/340 (56%), Gaps = 4/340 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW V EEMK  G  +   T   ++ + ++     D  KL+ +M +     P KP   +C
Sbjct: 281  EFWSVVEEMKNAGHEMDIDTYIKISRQFQKNKLMGDAVKLYEFMMDG----PFKPSVQDC 336

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
            S  L+ ++ +  PD++L +RV++ ++    ++ K +YDG HR LT  G F+EA K+M  M
Sbjct: 337  SMLLRSISASNYPDLNLVFRVVNKYEATGNSLSKAVYDGIHRSLTSIGNFDEAAKMMKCM 396

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
               G+ PDNITYSQL+FGLC A R ++A +++ EM+  GC PD +TWTILI+ HC AN+ 
Sbjct: 397  QTAGYEPDNITYSQLVFGLCKARRLEEACEVLDEMEAHGCLPDIKTWTILIQGHCVANEV 456

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
             + L    KM+   C  D+ ++  ++     + R+  A+     ++D+ +++P   TY  
Sbjct: 457  GKALMCLAKMMEKHCDPDADLLAVLINAFLSQKRIDGAYTLFMDMVDKARLRPWQATYKL 516

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLS----KAELS 890
            +I+KL + + L+EA  +  LM QH H P  +P  + I++ G+V+DA +FL     K   S
Sbjct: 517  LIEKLLEVRKLEEALNLLRLMKQHNHPPFPEPFVQYISRFGTVDDAADFLKALSVKEYPS 576

Query: 891  AKRCVAMFYAFCNAGRKGDAHALLLRCPPELFHSYEISRM 1010
                + +F +F  AGR  +A  LL +CP  +    +IS +
Sbjct: 577  TSAYLNVFQSFFRAGRHSEAKDLLFKCPHHIRKHPKISEL 616


>ref|XP_002321639.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550322390|gb|EEF05766.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 486

 Score =  229 bits (584), Expect = 2e-57
 Identities = 117/340 (34%), Positives = 198/340 (58%), Gaps = 4/340 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW V +EMK  G+ +   T   ++ + ++    ED  +L+ +M +     P KP   +C
Sbjct: 140  EFWSVVDEMKNAGYEMDIDTYIKISRQFQKIKLMEDAVRLYEFMMDG----PFKPSVQDC 195

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
               L+ +A + +PD+DL  RV+D +K    ++ K +YDG HR  T AG+F+EAEK++  M
Sbjct: 196  YILLRSVAASDNPDLDLVSRVVDGYKATGNSLSKSVYDGMHRSFTSAGKFDEAEKIVKAM 255

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
               G+ PDNITYSQL+FGLC + R ++A K++ EM+  GC PD +TWTILI+ H  AN+ 
Sbjct: 256  RDAGYEPDNITYSQLVFGLCKSKRLEEACKVLDEMEAGGCIPDIKTWTILIQGHFAANQV 315

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            ++ L   +KM       D+ +++ +V     + ++  A+ F+ +++++ ++ P   TY  
Sbjct: 316  DKGLLCLVKMTEKNTDPDADLLDVLVKGFLSQRKMDGAYTFLVEMVNKLRLVPWQATYKL 375

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLS----KAELS 890
            +I+KL Q + L+EA ++  LM +H + P  +P  + I+K G+VEDA+ F      K   S
Sbjct: 376  LIEKLLQVRKLEEATDLLRLMKKHNYPPFPEPFDQYISKFGTVEDAVNFFKVLSVKEYPS 435

Query: 891  AKRCVAMFYAFCNAGRKGDAHALLLRCPPELFHSYEISRM 1010
            +   + M  +F   GR  +A  LL +CP  +   ++IS++
Sbjct: 436  SVAYLRMLDSFLREGRDSEARDLLFKCPHHIRKDHKISKL 475


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cucumis sativus]
            gi|449524136|ref|XP_004169079.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  229 bits (584), Expect = 2e-57
 Identities = 120/355 (33%), Positives = 202/355 (56%), Gaps = 4/355 (1%)
 Frame = +3

Query: 6    FWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNCS 185
            FW V EEMK     +   T   ++ + ++     +  KL+  M +     P KP   +CS
Sbjct: 277  FWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEAVKLYELMMDG----PYKPSLQDCS 332

Query: 186  EALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTMI 365
              L+ +A + +PD+ L YRV   F+    ++ K +YDG HR LT  G+F++AE ++ +M 
Sbjct: 333  VLLRTIAASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMR 392

Query: 366  KEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKTE 545
              G+ PDN+TYSQL+FGLC A R ++ARK++ EM+ +GC PD +TWTILI+ HCNAN+ +
Sbjct: 393  NAGYEPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELD 452

Query: 546  RVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVEI 725
              L  F KM+   C  D+ +++ ++     + ++  A+  + ++ ++  V+P   TY ++
Sbjct: 453  IALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQL 512

Query: 726  IKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFL----SKAELSA 893
            IK L + + L+EA  +  LM +  + P  +P  + I+K G+V+DA +FL    SK   S 
Sbjct: 513  IKNLLEVRKLEEAIALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSV 572

Query: 894  KRCVAMFYAFCNAGRKGDAHALLLRCPPELFHSYEISRMAKGISLENTQSSPQKA 1058
               + +F +F N GR  +A  LL +CP  +    E+ ++  G +  NT ++ Q +
Sbjct: 573  SAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLF-GSAESNTTAATQSS 626


>ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [Amborella trichopoda]
            gi|548855973|gb|ERN13836.1| hypothetical protein
            AMTR_s00049p00223850 [Amborella trichopoda]
          Length = 570

 Score =  226 bits (577), Expect = 1e-56
 Identities = 128/340 (37%), Positives = 193/340 (56%), Gaps = 4/340 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW + +EMK  GF +   +   ++ R ++ N  ++  +L+ +M+E     P +P   +C
Sbjct: 225  EFWAMVKEMKESGFDMDMDSYVKLSRRFQKWNMLKEAVELYEFMSEG----PYQPSVQHC 280

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
               L+ LA + +P  DL +RV+  F+    ++ K IYDG HR LT  GRF+EA+ +++ M
Sbjct: 281  GLLLRKLATSGNPGPDLVFRVVKKFEGAGNSLTKSIYDGIHRSLTSMGRFDEAQNILEAM 340

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
             K GF PDNITYSQLIFGLC A+R  +A K + EM+  GC PD +TWTILI+ HC A + 
Sbjct: 341  EKAGFIPDNITYSQLIFGLCKAHRFDEACKFLDEMEALGCTPDLKTWTILIQGHCLAGEV 400

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            +  LS F KM+G G  AD+ ++E +V   C +NR  DA+  +  ++ +  +KP   TY  
Sbjct: 401  KEALSCFKKMLGKGVEADADLLEVLVAGFCNQNRPEDAYTLLSVMMTKTHLKPWQATYKI 460

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLSKAEL----S 890
            +I+ L   +ML+EA ++  LM +        P    I+K G  EDA++ L    L    S
Sbjct: 461  LIEGLLGRRMLEEALKLLLLMKKQKLPAFVDPFIGYISKNGMAEDAMDLLKTLTLGQNPS 520

Query: 891  AKRCVAMFYAFCNAGRKGDAHALLLRCPPELFHSYEISRM 1010
            +   V +F AF   GR  DA  LL R P  +    +IS++
Sbjct: 521  SAVYVNIFEAFMKEGRFTDAQDLLHRFPHHIRKHADISKL 560


>ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Capsella rubella]
            gi|565465717|ref|XP_006290750.1| hypothetical protein
            CARUB_v10016848mg [Capsella rubella]
            gi|482559456|gb|EOA23647.1| hypothetical protein
            CARUB_v10016848mg [Capsella rubella]
            gi|482559457|gb|EOA23648.1| hypothetical protein
            CARUB_v10016848mg [Capsella rubella]
          Length = 618

 Score =  224 bits (572), Expect = 6e-56
 Identities = 116/328 (35%), Positives = 186/328 (56%), Gaps = 4/328 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW V +EMK  G+ +   T   V+ + ++     +  KL+ +M +     P KPL  +C
Sbjct: 278  EFWNVVDEMKIAGYEMDLDTYIRVSRQFQKSRMMTEAVKLYEYMMDG----PFKPLVHDC 333

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
            S  L+ L+   +PD+DL +RV   F++   ++ K +YDG HR LT  GRF+EAE+++  M
Sbjct: 334  STLLRSLSAGPNPDLDLVFRVSRKFESSGNSLSKAVYDGIHRSLTSVGRFDEAEEIIKAM 393

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
                + PDNITYSQL+FGLC A R ++AR ++ +M+ +GC PD +TWTILI+ HC  N+ 
Sbjct: 394  RNASYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCSPDIKTWTILIQGHCKNNEL 453

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            ++  + F  M+  G   DS ++E ++     +NR+  A+ F+ +++    V+P   TY  
Sbjct: 454  DKAFACFANMLEKGFDVDSDLLEVLIGGFLSQNRIEGAYKFLMEMVRNANVRPWQSTYKI 513

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLSKAELSAKRC 902
            +I KL + K  +EA ++ ++M +  +   A+P    +AK G++EDA +FL          
Sbjct: 514  LIDKLLEIKKGEEALDLLQMMKKQNYPAYAEPFDGYLAKFGTLEDAKKFLDVLSSKDSPT 573

Query: 903  VAMFY----AFCNAGRKGDAHALLLRCP 974
             A ++    AF   GR  DA  LL  CP
Sbjct: 574  FAAYFHVIEAFYREGRLTDAKNLLFICP 601


>gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]
          Length = 627

 Score =  224 bits (571), Expect = 7e-56
 Identities = 120/328 (36%), Positives = 185/328 (56%), Gaps = 4/328 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW V  EM   GF L   T   V+   ++    ED  KL+  M +S    P KP    C
Sbjct: 287  EFWNVFSEMNAAGFRLDIDTYVKVSRSFQKNAMFEDGVKLYEHMMDS----PYKPSVSEC 342

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
            +  LQ L+   SPD+ L  RVI+ F     ++ K +YDG HR LT+ G+FEEAE +++ M
Sbjct: 343  NYLLQALSRHGSPDLGLIDRVIEKFVAGGNSLSKTLYDGIHRSLTRLGKFEEAEGIVEKM 402

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
             + GF PDN+TYSQL+FGLC  +R  +A  ++  M+  GC PD  TWTILI+ H    +T
Sbjct: 403  RENGFEPDNVTYSQLVFGLCKFDRFDEAAGVLESMEKWGCKPDIMTWTILIRGHFKGGET 462

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            ++ +  F +M+  G   D+ ++E IV  L +++R  DAF  + ++ ++ K++P   T+  
Sbjct: 463  DKAMLHFARMMEKGFDPDADLLEAIVDELSKKSRAPDAFRLLVELAEKLKLRPWQSTFKN 522

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLSKAELSAKRC 902
            +I++L   +  +EA  +  +M +  + P  +P  + ++K GSV+DALEFLS   +     
Sbjct: 523  LIQQLLDGRRFEEAVRLLAMMKRQNYPPHCEPFVDYVSKFGSVDDALEFLSSLTVKEYPS 582

Query: 903  VA----MFYAFCNAGRKGDAHALLLRCP 974
            ++    +F AF N  R  +A  LL RCP
Sbjct: 583  ISSYRHVFGAFLNENRHSEAKDLLFRCP 610


>ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Brachypodium distachyon]
          Length = 585

 Score =  224 bits (571), Expect = 7e-56
 Identities = 123/351 (35%), Positives = 201/351 (57%), Gaps = 6/351 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFWE+ +EMK  G  L   T   +N + ++ +   +  +L+  M +     P KP   + 
Sbjct: 238  EFWELIQEMKADGIYLDIDTYVKLNRQFQKRHMMTEAVELYELMMDG----PYKPSKQDG 293

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
               L+ +A   SPD++LA+RV+  F+       K ++DG HR LT  GRF+EA +VM++M
Sbjct: 294  PVLLRRIALGPSPDLELAHRVVRKFEAVYEFKTKDVFDGIHRALTSNGRFDEAAEVMESM 353

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
              EG  PDNITYSQL+FGLC AN+  +ARK++ EM+ +GC PD +TWT+LI+ HC A + 
Sbjct: 354  RSEGHQPDNITYSQLVFGLCKANKCDEARKVLVEMENEGCAPDLKTWTMLIQGHCTAGEV 413

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            ++ L    +M+ +   AD+ +++ +V  LC +++V  A+    +++D+ ++ P  GTY  
Sbjct: 414  DKALQYLTEMIENNLDADADLLDVMVRGLCNQDKVDAAYTLFVEMVDKAQLNPWQGTYKH 473

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLS------KAE 884
            II +L + K L+EA  + + M      P A P    IA+ G++EDA +FL        + 
Sbjct: 474  IISELLRVKKLEEALGLLKSMKARKFPPFADPFPPNIAEYGTLEDAKDFLKALKGGVNSY 533

Query: 885  LSAKRCVAMFYAFCNAGRKGDAHALLLRCPPELFHSYEISRMAKGISLENT 1037
             S    + MF +F   GR  +A  LL +CP  +   ++I+++ + I +E T
Sbjct: 534  PSHTAYLHMFKSFFAEGRYSEAQDLLYKCPIHIRRHHDITKLFESIKVETT 584


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  222 bits (566), Expect = 3e-55
 Identities = 120/342 (35%), Positives = 196/342 (57%), Gaps = 6/342 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW + EEMK  G  +   T   ++ + ++    ED  KL+  M +     P KP   +C
Sbjct: 283  EFWSMVEEMKSKGHEMDIDTYIKISRQFQKNKMLEDAVKLYEIMMDG----PYKPSVQDC 338

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
            +  L+ ++ + +PD+ L +RV + ++    ++ K +YDG HR LT  GRF+EA K+M++M
Sbjct: 339  TMLLRSISLSSNPDLALVFRVTEKYEAVGNSLCKAVYDGIHRSLTSVGRFDEAGKIMESM 398

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
               G  PDNITYSQL++GLC A + ++A K++ EM+  GC PD +TWTILI+ HC A + 
Sbjct: 399  RSAGCEPDNITYSQLVYGLCKARKLEEACKLLDEMEACGCVPDIKTWTILIQGHCAAKEV 458

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            ++ L  F KM+   C AD+ ++E ++     + R+  A+  + ++++   + P   TY  
Sbjct: 459  DKALICFAKMMEKNCDADADLLEVLINGFLSQKRIDGAYKLLVEMVNTAHLVPWQATYKL 518

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLSKAELSAKR- 899
            +I KL   + L+EA  +  LM +  + P  +P  E I+K G+VEDA EFL+   LSAK+ 
Sbjct: 519  MINKLLGVRKLEEAINLLHLMKKQNYPPFPEPFIEYISKFGTVEDAGEFLN--ALSAKKY 576

Query: 900  -----CVAMFYAFCNAGRKGDAHALLLRCPPELFHSYEISRM 1010
                  V +F +F   GR+ +A  LL +CP  +    +I ++
Sbjct: 577  PSQSAYVHVFESFFQEGRESEAKDLLYKCPHHIRKHPDICKL 618


>gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus vulgaris]
          Length = 631

 Score =  222 bits (565), Expect = 4e-55
 Identities = 123/342 (35%), Positives = 192/342 (56%), Gaps = 6/342 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW V EE+K  G  L   T   ++ +L++    ED  KL+  M + +     KPL  +C
Sbjct: 280  EFWSVIEELKSVGHELDIDTYIKISRQLQKNRMMEDAVKLYEHMMDGSY----KPLVQDC 335

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
            S  L+ ++ +  P++DL +RV   +++    + K IYDG HR LT AG+F+EAE ++ TM
Sbjct: 336  SLLLKSISASDKPNLDLVFRVARKYESTGHTLSKAIYDGIHRSLTGAGKFDEAENIVRTM 395

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
               G  PDNITYSQ+++GLC   R ++A K++ EM+  GC PD +TWTILI+ HC+AN+ 
Sbjct: 396  RNAGHKPDNITYSQVVYGLCKMRRFEEACKVLEEMESCGCIPDIKTWTILIQGHCDANEL 455

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            E+ L  F KM+   C+ D+ +++ +V     + R+  A+    ++  + ++ P   TY +
Sbjct: 456  EKALLCFSKMIEKDCNPDADLLDVLVDGFFSQKRIQGAYEVFIEISRKCRISPWQATYKK 515

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLSKAELSAKR- 899
            +I+KL +    +EA E+  LM  H + P   P    I+K GSVEDA  FL    LSAK  
Sbjct: 516  LIEKLLEVTKFEEALELLRLMKTHNYPPYHLPFVPYISKFGSVEDAEAFLK--ALSAKSY 573

Query: 900  -----CVAMFYAFCNAGRKGDAHALLLRCPPELFHSYEISRM 1010
                  V +F +    GR  +A  LL + P  +    +IS++
Sbjct: 574  PSHVVYVQVFESLFQEGRLSEAKDLLYKTPHHIRTHSKISKL 615


>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297323443|gb|EFH53864.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 618

 Score =  221 bits (564), Expect = 5e-55
 Identities = 121/328 (36%), Positives = 185/328 (56%), Gaps = 4/328 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW V +EMK  G  +   T   V+ + ++     +  KL+ +M +     P KP   +C
Sbjct: 278  EFWSVVDEMKTAGHEMDLDTYIKVSRQFQKSRMITETVKLYEYMMDG----PFKPSIQDC 333

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
            S  L+ L+   +PD+DL +RV   +++   ++ K +YDG HR LT  GRF+EAE++   M
Sbjct: 334  SLLLRYLSARPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAM 393

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
               G+ PDNITYSQL+FGLC A R ++AR ++ +M+ +GC PD +TWTILI+ HC  N+ 
Sbjct: 394  RNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNEL 453

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            +R L+ F  M+  G   DS +++ ++     +NR+  A IF+ +++    VKP   TY  
Sbjct: 454  DRALACFANMLEKGFDIDSNLLDVLIDGFLIQNRIEGASIFLMEMVKNANVKPWQSTYKR 513

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFL----SKAELS 890
            +I KL + K  KEA ++ +LM +  +   A+     +AK G++EDA +FL    SK   S
Sbjct: 514  LIDKLLEIKKGKEALDLLQLMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPS 573

Query: 891  AKRCVAMFYAFCNAGRKGDAHALLLRCP 974
                  +  AF   GR  DA  LL  CP
Sbjct: 574  FAAYFHVIEAFYREGRLTDAKNLLFICP 601


>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 630

 Score =  220 bits (561), Expect = 1e-54
 Identities = 121/340 (35%), Positives = 191/340 (56%), Gaps = 4/340 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW V EEMK  G  L   T   ++ + ++    ED  KL+  M +     P KP   + 
Sbjct: 282  EFWSVIEEMKVAGQELDLDTYIKLSRQFQKSKMVEDAVKLYELMMDG----PYKPSVQDV 337

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
            S  L+ ++  + PD+DL +RV+  F++    + K +YDG HR LT  GRF+EAE  +  M
Sbjct: 338  SILLRSISANERPDMDLVFRVVKKFESAGFTLSKAVYDGIHRSLTNLGRFDEAEDTLIAM 397

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
               GF PDNITYSQ++FGLC A +  +A K++ +M+  GC PD +TW ILI+ HC AN+ 
Sbjct: 398  RNAGFEPDNITYSQVVFGLCKAKKLDEACKLLDDMEENGCVPDIKTWMILIQGHCAANEI 457

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            ++ L  F KM+   C AD+ +++ ++  L ++ +V  A+  + ++++   V+P   T+  
Sbjct: 458  DKALICFAKMMEKECKADADILDVLINGLIKQAKVDGAYKLLIEMLNTAHVRPWQATFKN 517

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLS----KAELS 890
            +I+ L  ++ L+EA E+  LM + G+ P  +P    I+K GSVEDA EF      K   S
Sbjct: 518  LIQNLLGARKLEEAMELLCLMKKQGYPPYPEPFVGYISKFGSVEDASEFFKALSVKEYPS 577

Query: 891  AKRCVAMFYAFCNAGRKGDAHALLLRCPPELFHSYEISRM 1010
                V +F +F   GR  +A  LL +CP  +    E+ ++
Sbjct: 578  NAAYVHVFKSFFKEGRHSEAKDLLYKCPHHIRKLGEVRKL 617


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Glycine max]
          Length = 635

 Score =  220 bits (560), Expect = 1e-54
 Identities = 124/354 (35%), Positives = 190/354 (53%), Gaps = 4/354 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW V EEMK  G  L   T   +  +L+R    ED  KL+  M + +     KPL  +C
Sbjct: 282  EFWSVIEEMKRVGHELDIDTYIKITRQLQRNRMMEDAVKLYELMMDGSC----KPLVQDC 337

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
            +  L+ ++    P++DL +RV   +++    + K IYDG HR LT AG F+EAE ++ TM
Sbjct: 338  NMLLKSISANDKPNLDLVFRVAKKYESTGHTLSKAIYDGIHRSLTSAGNFDEAENIVRTM 397

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
               G+ PDNITYSQ++FGLC   R ++A K++ +M+   C PD +TWTILI+ HC+AN+ 
Sbjct: 398  RNAGYEPDNITYSQMVFGLCKMRRFEEACKVLEDMESSRCIPDIKTWTILIQGHCSANEV 457

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            ++ L  F KM+  GC  D+ +++ +      + R+  A+  + ++  + ++ P   TY +
Sbjct: 458  DKALLCFAKMIEKGCDPDADLLDVLADGFLSQKRIEGAYELVAEISRKCRISPWQATYKK 517

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLS----KAELS 890
            +I+KL      +EA E+  LM  H + P   P    I+K GSVEDA  FL     K+  S
Sbjct: 518  LIEKLLGVMKFEEALELLRLMKSHNYPPYHLPFVPYISKFGSVEDAEAFLKALSVKSYPS 577

Query: 891  AKRCVAMFYAFCNAGRKGDAHALLLRCPPELFHSYEISRMAKGISLENTQSSPQ 1052
                V +F +    GR  +A  LL + P    H    S++ K      T+S  Q
Sbjct: 578  HIVYVQVFESLFREGRLSEAKDLLYKTP---HHIRTHSKICKLFGSSETKSDTQ 628


>ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cicer arietinum]
          Length = 635

 Score =  219 bits (558), Expect = 2e-54
 Identities = 118/353 (33%), Positives = 193/353 (54%), Gaps = 4/353 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW + EEMK   + L   T   +  +L +    E+  +L+  M + +     KP   +C
Sbjct: 285  EFWSILEEMKSVRYQLDIDTYTTITMQLVKNQMIENAVELYELMMDGSY----KPSTHDC 340

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
               L  ++ +  P+ DLA+RV   +++    + K+IYDG HR LT AG+F+EAEK++ TM
Sbjct: 341  CVLLNAISTSDFPNSDLAFRVAKKYESVGHTLTKEIYDGIHRSLTSAGKFDEAEKIVKTM 400

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
               GF PD++TYSQ++FGLC   R ++A K++ +M+  GC PD  TW+ILI+ +C AN+ 
Sbjct: 401  SNAGFEPDSVTYSQVVFGLCKMKRLEEAHKVLEDMECCGCIPDSNTWSILIQGYCAANEV 460

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            ++ L   LKM+  GC+AD+  I  +V     + ++ DA+ F+ +++      P   TY +
Sbjct: 461  DKALHCLLKMIEKGCNADAGAISVLVDSWLSQEKIDDAYKFLAEMVRNCDASPRQPTYEK 520

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLSK----AELS 890
            +I+ L     L+EA  +  LM +H + P  KPI + I+K G+VEDA +FL        +S
Sbjct: 521  VIENLLGIGKLEEALVLLCLMWKHKYTPFTKPIVQFISKSGTVEDAEKFLKAWRKGNPVS 580

Query: 891  AKRCVAMFYAFCNAGRKGDAHALLLRCPPELFHSYEISRMAKGISLENTQSSP 1049
                + +F +F   G+  +A  LL +CP  +    ++      +   N  S P
Sbjct: 581  HSAYLHVFESFIREGKLSEAKDLLSKCPSRIRRRRQVVEFFDSVENRNAASVP 633


>ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g48250, chloroplastic; Flags: Precursor
            gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis
            thaliana] gi|332644870|gb|AEE78391.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  219 bits (557), Expect = 3e-54
 Identities = 118/328 (35%), Positives = 186/328 (56%), Gaps = 4/328 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW V +EMK  G+ +   T   V+ + ++     +  KL+ +M +     P KP   +C
Sbjct: 281  EFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDG----PFKPSIQDC 336

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
            S  L+ L+G+ +PD+DL +RV   +++   ++ K +YDG HR LT  GRF+EAE++   M
Sbjct: 337  SLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAM 396

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
               G+ PDNITYSQL+FGLC A R ++AR ++ +M+ +GC PD +TWTILI+ HC  N+ 
Sbjct: 397  RNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNEL 456

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            ++ L+ F  M+  G   DS +++ ++      N+   A IF+ +++    VKP   TY  
Sbjct: 457  DKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKL 516

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFL----SKAELS 890
            +I KL + K  +EA ++ ++M +  +   A+     +AK G++EDA +FL    SK   S
Sbjct: 517  LIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPS 576

Query: 891  AKRCVAMFYAFCNAGRKGDAHALLLRCP 974
                  +  AF   GR  DA  LL  CP
Sbjct: 577  FAAYFHVIEAFYREGRLTDAKNLLFICP 604


>ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutrema salsugineum]
            gi|557105401|gb|ESQ45735.1| hypothetical protein
            EUTSA_v10010209mg [Eutrema salsugineum]
          Length = 617

 Score =  213 bits (541), Expect = 2e-52
 Identities = 118/328 (35%), Positives = 182/328 (55%), Gaps = 4/328 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW V +EMK  G  +   T   V  + ++     +  KL+  M +     P KP A +C
Sbjct: 278  EFWSVVDEMKVAGHEVDLDTYIKVLRQFQKSRMMIEAVKLYELMMDG----PFKPSAQDC 333

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
            S  L+ L+    PD+DL +RV   +++   ++ K +YDG HR LT  GRF+EAE+++  M
Sbjct: 334  SLLLRSLSAGHKPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEIIKAM 393

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
               G+ PDNITYSQL+FGLC A R ++AR ++ +M+ +GC PD +TWTILI+ HC  ++ 
Sbjct: 394  RDSGYEPDNITYSQLVFGLCKAKRLEEARGVLEQMEAQGCFPDIKTWTILIQGHCKNSEV 453

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            ++  + F  M+  G   DS ++  +V     +NR+  A  F+ +++    VKP   TY  
Sbjct: 454  DQAFACFGNMLEKGFDIDSDLLAVLVNGFLSQNRIEGACKFLMEMVRNANVKPWQNTYKA 513

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFL----SKAELS 890
            +I KL + K  +EA ++ ++M +  +   A+P    +AK GSVEDA +FL    SK   S
Sbjct: 514  LIDKLLEIKKGEEALDLLQMMKKQNYPVYAEPFDGYLAKFGSVEDAKKFLDVLSSKDFPS 573

Query: 891  AKRCVAMFYAFCNAGRKGDAHALLLRCP 974
                  +  +F   GR  DA  L+  CP
Sbjct: 574  FAAIFRVIESFYREGRLADAKNLVFICP 601


>ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Solanum lycopersicum]
          Length = 642

 Score =  211 bits (538), Expect = 5e-52
 Identities = 114/328 (34%), Positives = 184/328 (56%), Gaps = 4/328 (1%)
 Frame = +3

Query: 3    EFWEVTEEMKGHGFLLANYTLNLVNSRLRRENRGEDMAKLFIWMAESAKNKPPKPLALNC 182
            EFW V +EM   GF +   T   ++   ++    +D  +L+  M +       KP    C
Sbjct: 285  EFWGVVKEMMSLGFEIDLDTYIKISRHFQKIKMLKDAVELYELMMDGQF----KPSLGEC 340

Query: 183  SEALQCLAGAKSPDVDLAYRVIDAFKNRDGAMDKKIYDGFHRCLTKAGRFEEAEKVMDTM 362
            +  L+ +A + S D+DL +RV++ F+    +  K IYD  HRCLT  GRFEEAEK+ + M
Sbjct: 341  NILLRSIAQSYSSDLDLLFRVVEKFEAAGHSRSKIIYDVIHRCLTNLGRFEEAEKITEAM 400

Query: 363  IKEGFAPDNITYSQLIFGLCDANRRKDARKIIREMKGKGCDPDCRTWTILIKAHCNANKT 542
               GF PDNITYSQLI+GLC   R ++A K+I  M+  GC PD +TWT+LI+ HC A + 
Sbjct: 401  RDAGFEPDNITYSQLIYGLCKVRRLEEASKVIDVMEECGCIPDIKTWTVLIQGHCFAGEV 460

Query: 543  ERVLSLFLKMVGSGCSADSKVIEEIVIHLCERNRVMDAFIFMCKVIDEQKVKPSSGTYVE 722
            ++ L  F KM+      D+ +++ ++     + RV  A+  + +++++ +++P   TY  
Sbjct: 461  DKALFCFAKMMEKNVDTDADLLDVLLNGFLSQRRVFGAYQLLTELVNKFQMRPWQATYKL 520

Query: 723  IIKKLAQSKMLKEACEMFELMNQHGHLPCAKPIYELIAKIGSVEDALEFLSKAELSAKRC 902
            +I+KL   +  +EA ++   M +H + P  +P  + I+K G+VEDA+EFL    +     
Sbjct: 521  VIQKLLGERKFEEALDLLRRMKKHNYPPFPEPFLQYISKSGTVEDAVEFLKALSVKDYPS 580

Query: 903  VA----MFYAFCNAGRKGDAHALLLRCP 974
            V+    +F +F   GR  +A  LL +CP
Sbjct: 581  VSAYQHVFQSFFAEGRHSEAKDLLYKCP 608