BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00020364
         (551 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Caps...   115   7e-24
ref|XP_002883423.1| pentatricopeptide repeat-containing protein ...   114   2e-23
ref|XP_004234835.1| PREDICTED: putative pentatricopeptide repeat...   112   6e-23
ref|NP_188975.3| pentatricopeptide repeat-containing protein [Ar...   112   8e-23
ref|XP_006349560.1| PREDICTED: putative pentatricopeptide repeat...   112   8e-23
ref|XP_003630975.1| Pentatricopeptide repeat-containing protein ...   112   8e-23
ref|XP_004503341.1| PREDICTED: putative pentatricopeptide repeat...   111   1e-22
gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus...   110   3e-22
ref|XP_004292543.1| PREDICTED: pentatricopeptide repeat-containi...   110   3e-22
gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]        110   3e-22
ref|XP_004301150.1| PREDICTED: pentatricopeptide repeat-containi...   109   5e-22
ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat...   109   5e-22
ref|XP_004976211.1| PREDICTED: putative pentatricopeptide repeat...   108   9e-22
gb|AEP33764.1| organelle transcript processing 82, partial [Iber...   108   9e-22
gb|ABR17838.1| unknown [Picea sitchensis]                             108   9e-22
ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat...   107   1e-21
ref|NP_200075.1| pentatricopeptide repeat protein MEF1 [Arabidop...   107   1e-21
ref|XP_006406039.1| hypothetical protein EUTSA_v10020184mg [Eutr...   107   2e-21
ref|XP_006369200.1| hypothetical protein POPTR_0001s18710g [Popu...   107   2e-21
ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Caps...   107   2e-21

>ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Capsella rubella]
           gi|482565768|gb|EOA29957.1| hypothetical protein
           CARUB_v10013060mg [Capsella rubella]
          Length = 730

 Score =  115 bits (288), Expect = 7e-24
 Identities = 53/168 (31%), Positives = 98/168 (58%)
 Frame = +1

Query: 34  QGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMI 213
           +G+++H  +I+ G+D +VY+G+SLV+ Y+K+       E + R F  +  ++ ++WN+++
Sbjct: 275 KGKEIHGYAIRKGIDADVYIGSSLVDMYAKSAR----IEDSERVFSHLARRDSISWNSLV 330

Query: 214 SACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFG 393
           +   ++ RY+  + LF +M+ T++ P  V    VI  C       L KQ+HG+ L+ GFG
Sbjct: 331 AGYVQNGRYNEALRLFRQMVTTKVRPGPVAFSSVIPACAHLATLRLGKQLHGYVLRGGFG 390

Query: 394 ENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
            N+F+ S +V MY K   I  AR++F+ +   D   + ++I G+   G
Sbjct: 391 SNIFISSSLVDMYSKCGNINAARKIFDRMNVHDEVSWTAIIMGYALHG 438



 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 47/230 (20%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFY-------SKNEEGYH------ 141
           LK+ +    L+ G+ VH   ++LG+D ++Y G +L+  Y       SK   G        
Sbjct: 112 LKSCTMMMDLRLGESVHGCIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGKVFDEMPQ 171

Query: 142 ----------------------------------GFEHAWRSFCKIHEKNVVAWNAMISA 219
                                             G +   + F  I  K+VV++N +I+ 
Sbjct: 172 RMSRLGSCCVATESVEPVMNCDEDLEAETCTMPLGIDSVRKVFEVIPRKDVVSYNTIIAG 231

Query: 220 CSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFGEN 399
            ++   Y   + L   M  T I P   TL  V+ +  +       K+IHG+A++ G   +
Sbjct: 232 YAQSGMYEDALRLVREMGTTDIKPDAFTLSSVLPIFSEYVDVIKGKEIHGYAIRKGIDAD 291

Query: 400 VFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKGLESE 549
           V++GS +V MY K   IE + +VF+ +  RD   +NSL+ G+ + G  +E
Sbjct: 292 VYIGSSLVDMYAKSARIEDSERVFSHLARRDSISWNSLVAGYVQNGRYNE 341



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/124 (26%), Positives = 60/124 (48%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH 180
           + A +    L+ G+Q+H   ++ G   N+++ +SLV+ YSK          A + F +++
Sbjct: 365 IPACAHLATLRLGKQLHGYVLRGGFGSNIFISSSLVDMYSK----CGNINAARKIFDRMN 420

Query: 181 EKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQ 360
             + V+W A+I   + H   H  + LF  M E  + P++V    V+  C    H GL  +
Sbjct: 421 VHDEVSWTAIIMGYALHGHGHEAVSLFEEMKEQGVKPNKVAFVAVLTACS---HVGLVDE 477

Query: 361 IHGF 372
             G+
Sbjct: 478 AWGY 481


>ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329263|gb|EFH59682.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 679

 Score =  114 bits (284), Expect = 2e-23
 Identities = 52/168 (30%), Positives = 97/168 (57%)
 Frame = +1

Query: 34  QGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMI 213
           +G+++H   I+ G+D +VY+G+SLV+ Y+K+       E + R F  ++ ++ ++WN+++
Sbjct: 224 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR----IEDSERVFSHLYRRDSISWNSLV 279

Query: 214 SACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFG 393
           +   ++ RY+  + LF +M+  ++ P  V    VI  C       L KQ+HG+ L+ GFG
Sbjct: 280 AGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 339

Query: 394 ENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
            N+F+ S +V MY K   I+ AR++F+ +   D   + ++I G    G
Sbjct: 340 RNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHG 387



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 52/183 (28%), Positives = 97/183 (53%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH 180
           LK+ +    L+ G+ VH   ++LG+D ++Y G +L+  YSK      G +   + F  + 
Sbjct: 112 LKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSK----LLGIDSVRKVFELMP 167

Query: 181 EKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQ 360
            K+VV++N +I+  ++   Y   + +   M  + + P   TL  V+ +  +       K+
Sbjct: 168 RKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKE 227

Query: 361 IHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKGL 540
           IHG+ ++ G   +V++GS +V MY K   IE + +VF+ +  RD   +NSL+ G+ + G 
Sbjct: 228 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGR 287

Query: 541 ESE 549
            +E
Sbjct: 288 YNE 290



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 39/169 (23%), Positives = 76/169 (44%)
 Frame = +1

Query: 34  QGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMI 213
           Q +Q+HA  I+       +   S+V     N +  H    A   F  +    V+AW ++I
Sbjct: 23  QAKQLHAQFIR--TQSLSHTSASIVISIYTNLKLLH---EALLVFKTLESPPVLAWKSVI 77

Query: 214 SACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFG 393
              +  + +   +  F  M  +   P       V+  C         + +HGF ++ G  
Sbjct: 78  RCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMD 137

Query: 394 ENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKGL 540
            +++ G+ ++ MY K+  I+  R+VF  +P +D+  YN++I G+ + G+
Sbjct: 138 CDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGM 186


>ref|XP_004234835.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Solanum lycopersicum]
          Length = 596

 Score =  112 bits (280), Expect = 6e-23
 Identities = 59/171 (34%), Positives = 98/171 (57%)
 Frame = +1

Query: 4   KAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHE 183
           KA    C  + GQ +H  + K+G D +V+VG+SLV+ Y+K        E A + F ++ E
Sbjct: 132 KACGILCDYRIGQSIHCFAFKIGFDSDVFVGSSLVDMYAK----CRNIEIARKVFDQMPE 187

Query: 184 KNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQI 363
           +NVV+W+ MI   ++ A     + LF   L   +  +  T   VI +C  +    L KQI
Sbjct: 188 RNVVSWSGMIYGYAQIAEDEEALRLFKLALGEGLDVNDFTFSSVIRVCANSTLLELGKQI 247

Query: 364 HGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLI 516
           HG  LK+ +  + F+GS ++++Y K   +E A +VFNE+P R+LG++N+++
Sbjct: 248 HGLCLKTSYDSSSFIGSALISLYSKCGLVEGAYRVFNEVPVRNLGMWNAML 298



 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 53/183 (28%), Positives = 93/183 (50%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH 180
           L +++ +  L +G  +HA  IK G+     V   L+ FYSK +        +   F +  
Sbjct: 30  LLSLTQSRSLPKGLALHAHIIKSGIQIIPLVSHHLINFYSKLQRPID----STLVFDETL 85

Query: 181 EKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQ 360
            K+   W+++IS+ S++ +    +  F +ML   ++P           CG      + + 
Sbjct: 86  SKSSTTWSSVISSLSQNEQPILALQFFRQMLHNGVTPDDHIFPCATKACGILCDYRIGQS 145

Query: 361 IHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKGL 540
           IH FA K GF  +VFVGS +V MY K   IE AR+VF+++P R++  ++ +I+G+ +   
Sbjct: 146 IHCFAFKIGFDSDVFVGSSLVDMYAKCRNIEIARKVFDQMPERNVVSWSGMIYGYAQIAE 205

Query: 541 ESE 549
           + E
Sbjct: 206 DEE 208



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/117 (29%), Positives = 61/117 (52%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH 180
           ++  +++  L+ G+Q+H L +K   D + ++G++L+  YSK        E A+R F ++ 
Sbjct: 232 IRVCANSTLLELGKQIHGLCLKTSYDSSSFIGSALISLYSKCGL----VEGAYRVFNEVP 287

Query: 181 EKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGL 351
            +N+  WNAM+ AC++H        LF  M    + P+ +T   V+  C    H GL
Sbjct: 288 VRNLGMWNAMLIACAQHGHTEKVFGLFKEMEGIVMKPNFITFLCVLYACS---HAGL 341


>ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g23330 gi|11994318|dbj|BAB02277.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332643232|gb|AEE76753.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  112 bits (279), Expect = 8e-23
 Identities = 52/168 (30%), Positives = 98/168 (58%)
 Frame = +1

Query: 34  QGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMI 213
           +G+++H   I+ G+D +VY+G+SLV+ Y+K+       E + R F +++ ++ ++WN+++
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR----IEDSERVFSRLYCRDGISWNSLV 315

Query: 214 SACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFG 393
           +   ++ RY+  + LF +M+  ++ P  V    VI  C       L KQ+HG+ L+ GFG
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375

Query: 394 ENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
            N+F+ S +V MY K   I+ AR++F+ +   D   + ++I G    G
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 423



 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSK------------------- 123
           LK+ +    L+ G+ VH   ++LG+D ++Y G +L+  Y+K                   
Sbjct: 112 LKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQ 171

Query: 124 -----NEEGYH--------GFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFN 264
                 +E           G +   R F  +  K+VV++N +I+  ++   Y   + +  
Sbjct: 172 RTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVR 231

Query: 265 RMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFGENVFVGSGIVAMYEKVE 444
            M  T + P   TL  V+ +  +       K+IHG+ ++ G   +V++GS +V MY K  
Sbjct: 232 EMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSA 291

Query: 445 EIEFARQVFNEIPYRDLGLYNSLIWGFRRKGLESE 549
            IE + +VF+ +  RD   +NSL+ G+ + G  +E
Sbjct: 292 RIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNE 326


>ref|XP_006349560.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Solanum tuberosum]
          Length = 596

 Score =  112 bits (279), Expect = 8e-23
 Identities = 59/171 (34%), Positives = 98/171 (57%)
 Frame = +1

Query: 4   KAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHE 183
           KA    C  + GQ +H  S K+G D +V+VG+SLV+ Y+K        E A + F ++ E
Sbjct: 132 KACGILCDYRIGQSIHCFSFKIGFDSDVFVGSSLVDMYAK----CGNIEIARKVFDQMPE 187

Query: 184 KNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQI 363
           +NVV+W+ MI   ++ A     + LF   L   +  +  T   VI +C  +    L KQI
Sbjct: 188 RNVVSWSGMIYGYAQMAEDEEALRLFKLALVEGLDVNDFTFSSVIRVCANSTLLELGKQI 247

Query: 364 HGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLI 516
           HG  LK+ +  + F+G+ ++++Y K   +E A +VFNE+P R+LG++N+++
Sbjct: 248 HGLCLKTSYDSSSFIGTALISLYSKCGLVEGAYRVFNEVPVRNLGMWNAML 298



 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 53/183 (28%), Positives = 94/183 (51%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH 180
           L +++ +  L +G  +HA  IK G+     V   L+ FYSK +        +   F + H
Sbjct: 30  LLSLTQSRSLPKGLALHAHIIKSGIQIIPLVSHHLINFYSKLQRPID----STLVFHETH 85

Query: 181 EKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQ 360
            K+   W+++IS+ S++ +    +  F +ML   ++P           CG      + + 
Sbjct: 86  SKSSTTWSSVISSLSQNEQPILALQFFRQMLHNGVTPDDHIFPCATKACGILCDYRIGQS 145

Query: 361 IHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKGL 540
           IH F+ K GF  +VFVGS +V MY K   IE AR+VF+++P R++  ++ +I+G+ +   
Sbjct: 146 IHCFSFKIGFDSDVFVGSSLVDMYAKCGNIEIARKVFDQMPERNVVSWSGMIYGYAQMAE 205

Query: 541 ESE 549
           + E
Sbjct: 206 DEE 208



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 35/117 (29%), Positives = 61/117 (52%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH 180
           ++  +++  L+ G+Q+H L +K   D + ++GT+L+  YSK        E A+R F ++ 
Sbjct: 232 IRVCANSTLLELGKQIHGLCLKTSYDSSSFIGTALISLYSKCGL----VEGAYRVFNEVP 287

Query: 181 EKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGL 351
            +N+  WNAM+ AC++H        LF  M    + P+ +T   V+  C    H GL
Sbjct: 288 VRNLGMWNAMLIACAQHGHTEKVFGLFKEMESIGMKPNFITFLCVLYACS---HAGL 341


>ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524997|gb|AET05451.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  112 bits (279), Expect = 8e-23
 Identities = 53/170 (31%), Positives = 97/170 (57%)
 Frame = +1

Query: 28  LKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNA 207
           + +G+++H  +++ G DG+V++G+SL++ Y+K        E + R+F  +  K+ ++WN+
Sbjct: 243 VNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNR----LECSLRAFYILPRKDAISWNS 298

Query: 208 MISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSG 387
           +I+ C ++  +  G+  F RML+  + P  V+   VI  C       L +Q+HG  ++ G
Sbjct: 299 IIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLG 358

Query: 388 FGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
           F +N F+ S +V MY K   I+ AR VF+ I  RD+  + ++I G    G
Sbjct: 359 FDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHG 408



 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 49/191 (25%), Positives = 100/191 (52%), Gaps = 12/191 (6%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSK-----------NEEGYHGF 147
           LKA +     K    +HA +++LG+D ++Y+  +L+  Y+K            + G  G 
Sbjct: 117 LKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGI 176

Query: 148 EHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLET-RISPSRVTLGIVIGM 324
           +   + F  +  ++VV+WN +I+  +++  Y   + +   M +  ++ P   TL  ++ +
Sbjct: 177 DCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPI 236

Query: 325 CGKNRHKGLCKQIHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLY 504
             ++      K+IHG+A+++GF  +VF+GS ++ MY K   +E + + F  +P +D   +
Sbjct: 237 FAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISW 296

Query: 505 NSLIWGFRRKG 537
           NS+I G  + G
Sbjct: 297 NSIIAGCVQNG 307



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/108 (32%), Positives = 55/108 (50%)
 Frame = +1

Query: 28  LKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNA 207
           L  G+Q+H   ++LG D N ++ +SLV+ Y+K        + A   F +I ++++VAW A
Sbjct: 344 LSLGRQLHGCIVRLGFDDNEFIASSLVDMYAK----CGNIKMARYVFDRIDKRDMVAWTA 399

Query: 208 MISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGL 351
           +I  C+ H      + LF  MLE  + P  V    V+  C    H GL
Sbjct: 400 IIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACS---HAGL 444


>ref|XP_004503341.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cicer arietinum]
          Length = 705

 Score =  111 bits (277), Expect = 1e-22
 Identities = 55/168 (32%), Positives = 93/168 (55%)
 Frame = +1

Query: 34  QGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMI 213
           +G+++H  +++ G DG+V++G+SLV+ Y+K        EH+   F  +  K+ ++WN++I
Sbjct: 250 RGKEIHGYALRHGFDGDVFIGSSLVDMYAKCNR----LEHSIEVFRLLPRKDAISWNSII 305

Query: 214 SACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFG 393
           + C ++  +  G+  F RML+  + P  V+   VI  C       L KQ+HG   + GF 
Sbjct: 306 AGCVQNGEFDRGLGFFRRMLKENVRPMHVSFSSVIPACAHLTAMSLGKQLHGCITRLGFD 365

Query: 394 ENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
           +N F+ S +V MY K   I+ AR VF+ I  RD   + ++I G    G
Sbjct: 366 DNEFIASSLVDMYAKCGNIKMARYVFDRIGKRDTVSWTAIIMGCAMHG 413



 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 51/198 (25%), Positives = 97/198 (48%), Gaps = 19/198 (9%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSK------------------N 126
           LKA +     K    +HA  ++LG+D ++Y+  +L+  Y+K                  +
Sbjct: 116 LKASTLLKHHKLAHSLHASVVRLGLDSDLYISNALINMYAKFCNFSVAANAGNVFDVIPH 175

Query: 127 EEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLET-RISPSRVT 303
            E +   +   + F  +  ++VV+WN +I+  +++  Y   + +  +M     + P   T
Sbjct: 176 REKFE-IDSVGKIFDMMPVRDVVSWNTVIAGYAQNGMYVEALNMVRKMGNNGNLKPDSFT 234

Query: 304 LGIVIGMCGKNRHKGLCKQIHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIP 483
           L  ++ +  +       K+IHG+AL+ GF  +VF+GS +V MY K   +E + +VF  +P
Sbjct: 235 LSSILPVFAEYVDVYRGKEIHGYALRHGFDGDVFIGSSLVDMYAKCNRLEHSIEVFRLLP 294

Query: 484 YRDLGLYNSLIWGFRRKG 537
            +D   +NS+I G  + G
Sbjct: 295 RKDAISWNSIIAGCVQNG 312



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/105 (32%), Positives = 52/105 (49%)
 Frame = +1

Query: 37  GQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMIS 216
           G+Q+H    +LG D N ++ +SLV+ Y+K        + A   F +I +++ V+W A+I 
Sbjct: 352 GKQLHGCITRLGFDDNEFIASSLVDMYAK----CGNIKMARYVFDRIGKRDTVSWTAIIM 407

Query: 217 ACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGL 351
            C+ H      + LF  MLE  I P  V    V+  C    H GL
Sbjct: 408 GCAMHGHALDAVSLFENMLEDGIRPCYVAFMAVLTACS---HAGL 449


>gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus vulgaris]
          Length = 600

 Score =  110 bits (274), Expect = 3e-22
 Identities = 61/178 (34%), Positives = 103/178 (57%)
 Frame = +1

Query: 4   KAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHE 183
           KA +    +++G+Q+H L++KLGV GN+YV  +L+  Y+   +     + A R F KI E
Sbjct: 134 KACARLKAIQEGKQLHCLAVKLGVSGNMYVCPTLINMYTACND----MDAARRVFDKIDE 189

Query: 184 KNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQI 363
             VVA+NA+IS+C+R ++ +  + LF  + E+ + P+ VT+ + +  C       L K I
Sbjct: 190 PCVVAYNAIISSCARSSQPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGKWI 249

Query: 364 HGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
           H +  K+GF + V V + ++ MY K   +E A  VF E+P RD   ++++I G+   G
Sbjct: 250 HEYVKKNGFDKYVKVNTALIDMYAKCGSLEDAVSVFREMPRRDTQAWSAMIVGYATHG 307


>ref|XP_004292543.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 1018

 Score =  110 bits (274), Expect = 3e-22
 Identities = 63/183 (34%), Positives = 101/183 (55%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH 180
           L A+SS   L  G  VHA++IK G++ NVYVG+SL+  Y+K E+     + A R F  + 
Sbjct: 325 LSAISSLAALDYGLIVHAIAIKQGLESNVYVGSSLINMYAKCEK----IDDATRIFHYLS 380

Query: 181 EKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQ 360
           EKNVV WN M+   +++   H  I LF  M    + P + T   ++  C   ++  + +Q
Sbjct: 381 EKNVVLWNTMLGGYAQNGYAHEVISLFTNMKACGLHPDQFTYTSILSACSCLQNLEMGRQ 440

Query: 361 IHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKGL 540
           +H   +K+ F  N+FVG+ ++ MY K   ++ AR  F  I  RD   +N++I G+ ++  
Sbjct: 441 LHSVIIKNQFASNLFVGNALIDMYAKSGNLKEARYQFELIRNRDKVSWNAIIVGYVQEED 500

Query: 541 ESE 549
           E E
Sbjct: 501 EDE 503



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 50/181 (27%), Positives = 91/181 (50%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH 180
           L A S    L+ G+Q+H++ IK     N++VG +L++ Y+K+       + A   F  I 
Sbjct: 426 LSACSCLQNLEMGRQLHSVIIKNQFASNLFVGNALIDMYAKSGN----LKEARYQFELIR 481

Query: 181 EKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQ 360
            ++ V+WNA+I    +         +F RM+   I P  V+L  ++  C   +   +  Q
Sbjct: 482 NRDKVSWNAIIVGYVQEEDEDEAFCMFRRMILHVIVPDEVSLASILSACANVQALKMGWQ 541

Query: 361 IHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKGL 540
           +H  ++K G   +++ GS ++ MY K   I  +R+V + +P+  +   N+LI GF  +  
Sbjct: 542 VHCLSIKIGLETSLYSGSSLIDMYSKCGLIWDSRRVLDLLPHCSVVSMNALISGFVHRNF 601

Query: 541 E 543
           E
Sbjct: 602 E 602



 Score = 72.0 bits (175), Expect = 9e-11
 Identities = 37/128 (28%), Positives = 68/128 (53%)
 Frame = +1

Query: 166 FCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHK 345
           F ++   N VAWN MIS  ++       +  F +M +  + P+R TLG ++         
Sbjct: 275 FSQMPNPNDVAWNVMISGHAKRGFEVEAVNFFLQMRKGGVKPTRSTLGSLLSAISSLAAL 334

Query: 346 GLCKQIHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGF 525
                +H  A+K G   NV+VGS ++ MY K E+I+ A ++F+ +  +++ L+N+++ G+
Sbjct: 335 DYGLIVHAIAIKQGLESNVYVGSSLINMYAKCEKIDDATRIFHYLSEKNVVLWNTMLGGY 394

Query: 526 RRKGLESE 549
            + G   E
Sbjct: 395 AQNGYAHE 402



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
 Frame = +1

Query: 1    LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH 180
            L A ++   LK G QVH LSIK+G++ ++Y G+SL++ YSK    +     + R    + 
Sbjct: 527  LSACANVQALKMGWQVHCLSIKIGLETSLYSGSSLIDMYSKCGLIWD----SRRVLDLLP 582

Query: 181  EKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQ 360
              +VV+ NA+IS    H  +   I +F  M +  ++PS VT   ++  C       L +Q
Sbjct: 583  HCSVVSMNALISGFV-HRNFEEAINIFCEMQDIGLNPSEVTFSSLLDACSGPSMLPLGRQ 641

Query: 361  IHGFALKSG-FGENVFVGSGIVAMYEKVEEIEFARQVFNEI-PYRDLGLYNSLIWGF 525
            IH   LK G   +  F+G  ++ MY   +    A  +F E    ++  L+ ++I GF
Sbjct: 642  IHNIVLKKGLLFDGDFLGVSLLGMYMNCQSKIDATNLFLEFHKPKNKVLWTAMISGF 698



 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
 Frame = +1

Query: 1    LKAMSSACWLKQGQQVHALSIKLGV--DGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCK 174
            L A S    L  G+Q+H + +K G+  DG+ ++G SL+  Y   +        A   F +
Sbjct: 627  LDACSGPSMLPLGRQIHNIVLKKGLLFDGD-FLGVSLLGMYMNCQSKID----ATNLFLE 681

Query: 175  IHE-KNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGL 351
             H+ KN V W AMIS  S++      +  +  M      P + T   V+  C        
Sbjct: 682  FHKPKNKVLWTAMISGFSQNDCIEEALQFYQDMRSDNALPDQATFASVLRACAVISSLQN 741

Query: 352  CKQIHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRD-LGLYNSLIWGFR 528
             +QIH     +GF  +    S +V MY K  ++  + QVF E+  ++ +  +NS+I GF 
Sbjct: 742  GRQIHSLIFHTGFNLDELTCSALVDMYAKCGDVGSSMQVFQEMGTKNGVISWNSMIVGFA 801

Query: 529  RKG 537
            + G
Sbjct: 802  KNG 804



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
 Frame = +1

Query: 46  VHALSIKLGVDGNVYVGTSLVEFYSK-NEEGYHGFEHAWRSFCKIHEKNVVAWNAMISAC 222
           +HA  +K        +G  +V FY+K    GY     A ++F  +  K+V AWN+++S  
Sbjct: 72  IHAQGLKFEFGSKGLLGNGIVGFYAKCGNLGY-----AEKAFNCLENKDVFAWNSVLSMY 126

Query: 223 SRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFGENV 402
           S        +  F  M   ++ P+  T  +V+  C +  +    +Q+H   +K G     
Sbjct: 127 SNKGLLDQVLNSFQSMWNCKVLPNEFTFAMVLSACTRLVNIEYGRQVHCSVIKLGLELIS 186

Query: 403 FVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKGLESE 549
           F    ++ MY K   I  A+Q+F      D   + ++I G+ + GL  E
Sbjct: 187 FCQGALIDMYAKCNCISDAQQIFESAIELDTVSWTTMISGYVQVGLLEE 235


>gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  110 bits (274), Expect = 3e-22
 Identities = 51/165 (30%), Positives = 95/165 (57%)
 Frame = +1

Query: 28  LKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNA 207
           + +G+++H  SI+ G+D  VYV +SL++ Y+K          ++R F  + E++ ++WN+
Sbjct: 316 ISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTR----VVDSYRVFTLLTERDGISWNS 371

Query: 208 MISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSG 387
           +I+ C ++  +  G+  F +ML  +I P   +   ++  C       L KQ+HG+  ++G
Sbjct: 372 IIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNG 431

Query: 388 FGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWG 522
           F EN+F+ S +V MY K   I  ARQ+F+ +  RD+  + ++I G
Sbjct: 432 FDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMG 476


>ref|XP_004301150.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 892

 Score =  109 bits (272), Expect = 5e-22
 Identities = 59/175 (33%), Positives = 99/175 (56%)
 Frame = +1

Query: 25  WLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWN 204
           +L  G+Q+H+  +K+G+  +  VG+SL   YSK +      E ++++F +I EK+ V+W 
Sbjct: 462 FLVAGRQIHSYILKVGLVTDSSVGSSLSTMYSKCDS----LEESYKAFQQIREKDSVSWA 517

Query: 205 AMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKS 384
           +MI+  S H      + L+  M    I P ++ L  ++  C  +R   + K+IHG AL++
Sbjct: 518 SMIAGFSEHGFADQALQLYREMPYKEIKPDQMILAAILNACSASRSLLIGKEIHGHALRA 577

Query: 385 GFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKGLESE 549
           G G +V VG  IV MY K   +E AR+VF+ +P +D    +SL+ G+ + G   E
Sbjct: 578 GVGRDVVVGGAIVNMYSKCTALELARRVFDMLPQKDEVACSSLVSGYAQNGCIEE 632



 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 55/166 (33%), Positives = 90/166 (54%)
 Frame = +1

Query: 37  GQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMIS 216
           G+QV++L+ K G   N YV + +++ ++KN      FE A R FC +  +NVV WNA+IS
Sbjct: 166 GKQVYSLATKNGFFSNDYVRSGMIDLFAKNGS----FEDALRVFCDVSCRNVVIWNALIS 221

Query: 217 ACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFGE 396
              R+      + +F +M    + PS  T   V+  C      G+ K +HG+ +K G  E
Sbjct: 222 GAVRNGENRVALEIFRQMCCGFVLPSNFTFSSVLTACAALEEIGIGKSVHGWVIKCG-AE 280

Query: 397 NVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRK 534
           +VFVG+ IV +Y K  ++  A + F  +P  ++  + ++I GF  K
Sbjct: 281 DVFVGTAIVDLYAKCGKMNEAVKEFFGMPTCNVVSWTAIISGFVSK 326



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 54/173 (31%), Positives = 93/173 (53%), Gaps = 1/173 (0%)
 Frame = +1

Query: 22  CWLKQGQQVHALSIKLG-VDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVA 198
           C ++  + +HA  ++L  +  NV +  SL++ Y ++       E A   F  I ++NV++
Sbjct: 59  CTIRNTRILHAHLLRLHFLLSNVSISNSLLDCYCRSA----AMEDALHLFDVIPQRNVIS 114

Query: 199 WNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFAL 378
           WN M+S  +R++ Y     +F RM  +   P   T G V+  C   R  GL KQ++  A 
Sbjct: 115 WNFMVSGYNRNSVYERSWGVFCRMHCSGFEPDEFTYGSVLSACAALRAPGLGKQVYSLAT 174

Query: 379 KSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
           K+GF  N +V SG++ ++ K    E A +VF ++  R++ ++N+LI G  R G
Sbjct: 175 KNGFFSNDYVRSGMIDLFAKNGSFEDALRVFCDVSCRNVVIWNALISGAVRNG 227



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 50/179 (27%), Positives = 91/179 (50%)
 Frame = +1

Query: 1    LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH 180
            L A S++  L  G+++H  +++ GV  +V VG ++V  YSK        E A R F  + 
Sbjct: 555  LNACSASRSLLIGKEIHGHALRAGVGRDVVVGGAIVNMYSKCT----ALELARRVFDMLP 610

Query: 181  EKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQ 360
            +K+ VA ++++S  +++      ++LFN ML   ++    T+  ++G+     +     Q
Sbjct: 611  QKDEVACSSLVSGYAQNGCIEEALLLFNYMLTADLTIDSFTISSILGVIAVVNNPSCGTQ 670

Query: 361  IHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
            +H    K G   +V V S +V MY K   IE  R+ F++I   DL  + ++I  + + G
Sbjct: 671  MHAHITKIGLNSDVSVDSSLVRMYSKCGSIEDCRKSFDQIENPDLICWTAMIASYAQHG 729



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
 Frame = +1

Query: 37  GQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMIS 216
           G+ VH   IK G + +V+VGT++V+ Y+K  +       A + F  +   NVV+W A+IS
Sbjct: 267 GKSVHGWVIKCGAE-DVFVGTAIVDLYAKCGK----MNEAVKEFFGMPTCNVVSWTAIIS 321

Query: 217 ACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFGE 396
                      +  F  M       ++ T+  ++  C K        QIH   LKSG   
Sbjct: 322 GFVSKEDSISAVKFFREMRRMGEEINKFTVTSILTACAKPSMSEEANQIHSLILKSGLYL 381

Query: 397 NVFVGSGIVAMYEKVEEIEFARQVFNEI-PYRDLGLYNSLI 516
              VGS ++  Y K+  ++ +  VF E    +D G + ++I
Sbjct: 382 APVVGSALINAYSKIGAVDLSEMVFRETETVKDPGTWAAMI 422



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 48/183 (26%), Positives = 85/183 (46%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH 180
           L A +     ++  Q+H+L +K G+     VG++L+  YSK        E  +R    + 
Sbjct: 355 LTACAKPSMSEEANQIHSLILKSGLYLAPVVGSALINAYSK-IGAVDLSEMVFRETETV- 412

Query: 181 EKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQ 360
            K+   W AMIS+ +++        +F RML+  + P + +   V+ +          +Q
Sbjct: 413 -KDPGTWAAMISSYAQNQNPGRATRVFQRMLQEGVLPDKFSTSSVLSIID---FLVAGRQ 468

Query: 361 IHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKGL 540
           IH + LK G   +  VGS +  MY K + +E + + F +I  +D   + S+I GF   G 
Sbjct: 469 IHSYILKVGLVTDSSVGSSLSTMYSKCDSLEESYKAFQQIREKDSVSWASMIAGFSEHGF 528

Query: 541 ESE 549
             +
Sbjct: 529 ADQ 531



 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
 Frame = +1

Query: 37   GQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMIS 216
            G Q+HA   K+G++ +V V +SLV  YSK        E   +SF +I   +++ W AMI+
Sbjct: 668  GTQMHAHITKIGLNSDVSVDSSLVRMYSK----CGSIEDCRKSFDQIENPDLICWTAMIA 723

Query: 217  ACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGF--ALKSGF 390
            + ++H +    +  +  + E  I P  VT   V+  C    H GL ++ + +  ++ S +
Sbjct: 724  SYAQHGKGADALRGYELLREKGIKPDSVTFVAVLSACS---HNGLVEEAYFYFNSMASDY 780

Query: 391  G 393
            G
Sbjct: 781  G 781


>ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Solanum lycopersicum]
          Length = 688

 Score =  109 bits (272), Expect = 5e-22
 Identities = 67/184 (36%), Positives = 103/184 (55%), Gaps = 1/184 (0%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGF-EHAWRSFCKI 177
           LK+ +     + G + H L +K G D +V+V T LV FY++      GF + A + F  I
Sbjct: 120 LKSCTRLSDFELGVKAHGLVVKGGFDYDVFVKTGLVCFYARC-----GFLDDAHQMFDDI 174

Query: 178 HEKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCK 357
            EKNVV+W A+I+      ++   I LF R LE  +SP   TL  V+  C +       +
Sbjct: 175 PEKNVVSWTAIITGYIDFGKFKEAIDLFRRSLEMGLSPDSFTLVRVLSACSRVGDVSAGE 234

Query: 358 QIHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
            IHG+A++ G G NVFV +G+V MY K  E+  AR+VF+E+  +D+  ++++I G+   G
Sbjct: 235 WIHGYAVEMGIGRNVFVNTGLVDMYAKCGEMAKAREVFDEMVEKDVVSWSAMIQGYAVNG 294

Query: 538 LESE 549
           L  E
Sbjct: 295 LPKE 298



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 44/164 (26%), Positives = 81/164 (49%)
 Frame = +1

Query: 34  QGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMI 213
           Q + +HA  I+ G D N Y+   L++F   N   ++   +A   F +  E N+  +N MI
Sbjct: 29  QLKHIHARLIRAGFDQNNYLLNLLLKFTLNN---FNNPNYAKLVFNQAQEPNIFLYNTMI 85

Query: 214 SACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFG 393
                +  +H  I  F+ M      P+  T   ++  C +     L  + HG  +K GF 
Sbjct: 86  RGLVSNNCFHQSIEFFHGMRNEGFLPNNFTFPFLLKSCTRLSDFELGVKAHGLVVKGGFD 145

Query: 394 ENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGF 525
            +VFV +G+V  Y +   ++ A Q+F++IP +++  + ++I G+
Sbjct: 146 YDVFVKTGLVCFYARCGFLDDAHQMFDDIPEKNVVSWTAIITGY 189



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/180 (23%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH 180
           L A S    +  G+ +H  ++++G+  NV+V T LV+ Y+K  E       A   F ++ 
Sbjct: 221 LSACSRVGDVSAGEWIHGYAVEMGIGRNVFVNTGLVDMYAKCGE----MAKAREVFDEMV 276

Query: 181 EKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQ 360
           EK+VV+W+AMI   + +      + +F  M    + P   ++  V+  C +     + + 
Sbjct: 277 EKDVVSWSAMIQGYAVNGLPKEALEVFYTMQRENVRPDCYSMVGVLSACSRLGALEVGEW 336

Query: 361 IHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNE-IPYRDLGLYNSLIWGFRRKG 537
                  + F  N  +G+ ++ MY K   +  A ++F + +  +D  ++N+++ G    G
Sbjct: 337 ASKLMDMNEFLSNAVLGTALIDMYAKCGRMVSAWEIFKQMLVKKDRVIWNAVLSGLAMHG 396


>ref|XP_004976211.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like isoform X1 [Setaria italica]
           gi|514802639|ref|XP_004976212.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g23330-like isoform X2 [Setaria italica]
          Length = 644

 Score =  108 bits (270), Expect = 9e-22
 Identities = 51/170 (30%), Positives = 98/170 (57%)
 Frame = +1

Query: 28  LKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNA 207
           +K+G +VH  +I+ G D +V+VG+SL++ Y+         +++ + F K+  ++ + WN+
Sbjct: 187 VKRGMEVHGFAIRNGFDNDVFVGSSLIDMYANCTRT----DYSVKVFDKLPVRDPILWNS 242

Query: 208 MISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSG 387
           M++ C+++      + +F+RML+  + P  VT   +I +CG        KQ+H + ++ G
Sbjct: 243 MLAGCAQNGSVEEALGIFHRMLQAGVRPVPVTFSSLIPICGNLASLRFGKQLHAYVIQGG 302

Query: 388 FGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
           F +NVF+ S ++ MY K  EI  AR +F+ +P  D+    ++I G+   G
Sbjct: 303 FEDNVFISSSLIDMYCKCGEISIARCIFDRMPSPDIVSRTAMIMGYALHG 352



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 15/186 (8%)
 Frame = +1

Query: 37  GQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGY---------------HGFEHAWRSFC 171
           G  +H L+I+ G   + +   +L+ FY K  + Y                  E   + F 
Sbjct: 70  GASLHGLAIRSGAFADRFTANALLNFYCKLPDSYLHSSGVISMDGTGSATALESVRKVFD 129

Query: 172 KIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGL 351
           ++ E++VV+WN ++  C+   R+   + L  +M      P   TL  V+ +  +      
Sbjct: 130 EMLERDVVSWNTLVLGCAEEGRHQEALGLVRKMWSDGFRPDSFTLSSVLPIFAECADVKR 189

Query: 352 CKQIHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRR 531
             ++HGFA+++GF  +VFVGS ++ MY      +++ +VF+++P RD  L+NS++ G  +
Sbjct: 190 GMEVHGFAIRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDKLPVRDPILWNSMLAGCAQ 249

Query: 532 KGLESE 549
            G   E
Sbjct: 250 NGSVEE 255


>gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  108 bits (270), Expect = 9e-22
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 27/210 (12%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKN---EEGYHGF-------- 147
           LK+ + +   K+GQQ+H   +KLG D ++YV TSL+  Y +N   E+ +  F        
Sbjct: 98  LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDV 157

Query: 148 ----------------EHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLET 279
                           E+A + F +I  K+VV+WNAMIS  +    Y   + LF  M++T
Sbjct: 158 VSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 217

Query: 280 RISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFGENVFVGSGIVAMYEKVEEIEFA 459
            + P   T+  V+  C ++    L +Q+H +    GFG N+ + + ++ +Y K  E+E A
Sbjct: 218 NVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETA 277

Query: 460 RQVFNEIPYRDLGLYNSLIWGFRRKGLESE 549
             +F  +PY+D+  +N+LI G+    L  E
Sbjct: 278 CGLFEGLPYKDVISWNTLIGGYTHMNLYKE 307



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 48/170 (28%), Positives = 87/170 (51%)
 Frame = +1

Query: 28  LKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNA 207
           L+  + +HA  IK G+    Y  + L+EF   +   + G  +A   F  I E N++ WN 
Sbjct: 3   LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPH-FDGLPYAISVFETIQEPNLLIWNT 61

Query: 208 MISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSG 387
           M    +  +     + L+  M+   + P+  T   ++  C K++     +QIHG  LK G
Sbjct: 62  MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLG 121

Query: 388 FGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
              +++V + +++MY +   +E A +VF+E P+RD+  Y +LI G+  +G
Sbjct: 122 CDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRG 171



 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
 Frame = +1

Query: 28  LKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNA 207
           ++ G+QVH+     G   N+ +  +L++ YSK  E     E A   F  +  K+V++WN 
Sbjct: 239 IELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGE----LETACGLFEGLPYKDVISWNT 294

Query: 208 MISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALK-- 381
           +I   +    Y   ++LF  ML +  +P+ VT+  ++  C       + + IH +  K  
Sbjct: 295 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 354

Query: 382 SGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
            G      + + ++ MY K  +IE A QVFN I ++ L  +N++I+GF   G
Sbjct: 355 KGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 406


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  108 bits (270), Expect = 9e-22
 Identities = 58/166 (34%), Positives = 92/166 (55%)
 Frame = +1

Query: 28  LKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNA 207
           L+QGQQ+H  +I+ G + N  VG +LV  Y+K          A++ F ++ +KNVVAWNA
Sbjct: 338 LEQGQQIHGYAIRSGFESNDVVGNALVNMYAK----CGNVNSAYKLFERMPKKNVVAWNA 393

Query: 208 MISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSG 387
           +IS  S+H   H  + LF  M    I P    +  V+  C         KQIHG+ ++SG
Sbjct: 394 IISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSG 453

Query: 388 FGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGF 525
           F  NV VG+G+V +Y K   +  A+++F  +P +D+  + ++I  +
Sbjct: 454 FESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAY 499



 Score =  100 bits (250), Expect = 2e-19
 Identities = 53/170 (31%), Positives = 96/170 (56%)
 Frame = +1

Query: 28  LKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNA 207
           L+QG+Q+H  +I+ G++ +V V   LV  Y+K          A + F ++  ++V +WNA
Sbjct: 237 LEQGKQIHCYAIRSGIESDVLVVNGLVNMYAK----CGNVNTAHKLFERMPIRDVASWNA 292

Query: 208 MISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSG 387
           +I   S ++++H  +  FNRM    I P+ +T+  V+  C         +QIHG+A++SG
Sbjct: 293 IIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSG 352

Query: 388 FGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
           F  N  VG+ +V MY K   +  A ++F  +P +++  +N++I G+ + G
Sbjct: 353 FESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHG 402



 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 57/175 (32%), Positives = 99/175 (56%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH 180
           +KA  S   L+ G++VH   I  G + +V VGT+L   Y+K        E+A + F ++ 
Sbjct: 127 IKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTK----CGSLENARQVFDRMP 182

Query: 181 EKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQ 360
           +++VV+WNA+I+  S++ + +  + LF+ M    I P+  TL  V+ +C         KQ
Sbjct: 183 KRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQ 242

Query: 361 IHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGF 525
           IH +A++SG   +V V +G+V MY K   +  A ++F  +P RD+  +N++I G+
Sbjct: 243 IHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGY 297



 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 35/117 (29%), Positives = 62/117 (52%)
 Frame = +1

Query: 187 NVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIH 366
           N V W   I    ++  ++  + L+ +M  T I+P ++    VI  CG        +++H
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143

Query: 367 GFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
              +  GF  +V VG+ + +MY K   +E ARQVF+ +P RD+  +N++I G+ + G
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNG 200


>ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Setaria italica]
          Length = 608

 Score =  107 bits (268), Expect = 1e-21
 Identities = 62/174 (35%), Positives = 98/174 (56%)
 Frame = +1

Query: 28  LKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNA 207
           L++G+QVHA  +  G    +Y+ T LV  Y++        E A      + E+NVV+W A
Sbjct: 51  LREGRQVHARMVAAGYRPALYLATRLVIMYAR----CGALEDARNVLDGMPERNVVSWTA 106

Query: 208 MISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSG 387
           MIS  S++ R    + LF  ML     P+  TL  V+  C  ++     KQ+H FA+K+ 
Sbjct: 107 MISGYSQNERPAEAMELFVMMLRAGCEPNEFTLASVLTSCTGSQGIHQVKQVHAFAVKTN 166

Query: 388 FGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKGLESE 549
           F  ++FVGS ++ MY K E ++ AR+VF+ +P RD+  Y ++I G+ + GL+ E
Sbjct: 167 FELHMFVGSALLDMYAKSENVQEARRVFDMLPARDVVSYTAIISGYTQLGLDEE 220



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 47/187 (25%), Positives = 99/187 (52%), Gaps = 4/187 (2%)
 Frame = +1

Query: 1   LKAMSSACWLKQG----QQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSF 168
           L ++ ++C   QG    +QVHA ++K   + +++VG++L++ Y+K+E      + A R F
Sbjct: 139 LASVLTSCTGSQGIHQVKQVHAFAVKTNFELHMFVGSALLDMYAKSEN----VQEARRVF 194

Query: 169 CKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKG 348
             +  ++VV++ A+IS  ++       + LF ++    +  + VT   ++          
Sbjct: 195 DMLPARDVVSYTAIISGYTQLGLDEEALDLFRQLYNEGMQCNEVTFTALLNALSGLASLD 254

Query: 349 LCKQIHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFR 528
             KQ+HG  L+      + + + ++ MY K  ++ ++R+VFN +P R +  +N+++ G+ 
Sbjct: 255 YGKQVHGLILRKELPFFMVLQNSLIDMYSKCGKLLYSRRVFNNMPKRSVVSWNAILMGYG 314

Query: 529 RKGLESE 549
           R GL  E
Sbjct: 315 RHGLAHE 321


>ref|NP_200075.1| pentatricopeptide repeat protein MEF1 [Arabidopsis thaliana]
           gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g52630 gi|8953718|dbj|BAA98081.1|
           selenium-binding protein-like [Arabidopsis thaliana]
           gi|332008860|gb|AED96243.1| pentatricopeptide repeat
           protein MEF1 [Arabidopsis thaliana]
          Length = 588

 Score =  107 bits (268), Expect = 1e-21
 Identities = 56/160 (35%), Positives = 95/160 (59%)
 Frame = +1

Query: 37  GQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMIS 216
           G+ VH LS+K G D +V+VG+SLV+ Y+K  E      +A + F ++ ++NVV W+ M+ 
Sbjct: 135 GRSVHCLSMKTGYDADVFVGSSLVDMYAKCGE----IVYARKMFDEMPQRNVVTWSGMMY 190

Query: 217 ACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFGE 396
             ++       + LF   L   ++ +  +   VI +C  +    L +QIHG ++KS F  
Sbjct: 191 GYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDS 250

Query: 397 NVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLI 516
           + FVGS +V++Y K    E A QVFNE+P ++LG++N+++
Sbjct: 251 SSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAML 290



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 44/172 (25%), Positives = 90/172 (52%)
 Frame = +1

Query: 34  QGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMI 213
           +G Q+H   +K G+     V  +L+ FYSK++  +     + R+F    +K+   W+++I
Sbjct: 33  KGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFD----SRRAFEDSPQKSSTTWSSII 88

Query: 214 SACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFG 393
           S  +++      +    +M+   + P    L      C       + + +H  ++K+G+ 
Sbjct: 89  SCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYD 148

Query: 394 ENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKGLESE 549
            +VFVGS +V MY K  EI +AR++F+E+P R++  ++ +++G+ + G   E
Sbjct: 149 ADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEE 200



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 40/117 (34%), Positives = 64/117 (54%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH 180
           +   +++  L+ G+Q+H LSIK   D + +VG+SLV  YSK        E A++ F ++ 
Sbjct: 224 ISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVP----EGAYQVFNEVP 279

Query: 181 EKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGL 351
            KN+  WNAM+ A ++H+     I LF RM  + + P+ +T   V+  C    H GL
Sbjct: 280 VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS---HAGL 333


>ref|XP_006406039.1| hypothetical protein EUTSA_v10020184mg [Eutrema salsugineum]
           gi|557107185|gb|ESQ47492.1| hypothetical protein
           EUTSA_v10020184mg [Eutrema salsugineum]
          Length = 694

 Score =  107 bits (267), Expect = 2e-21
 Identities = 49/168 (29%), Positives = 96/168 (57%)
 Frame = +1

Query: 34  QGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMI 213
           +G+++H   I+ G+D +VY+G+SLV+ Y+K+       E + R F  +  ++ ++WN+++
Sbjct: 249 KGKEIHGYVIRKGIDADVYIGSSLVDMYAKSAR----IEDSERVFSHLSCRDSISWNSLV 304

Query: 214 SACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFG 393
           +   ++ RY+  + LF +M+  ++ P  V    V+  C       L KQ+HG+ L+ G+ 
Sbjct: 305 AGYVQNGRYNEAVRLFRQMVNAKVRPGPVAFSSVLPACAHLSTLTLGKQLHGYVLRGGYS 364

Query: 394 ENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
           +N+F+ S +V MY K   I+ AR++F+ +   D   + ++I G    G
Sbjct: 365 DNIFIASALVDMYSKCGNIKAARKIFDRMNLHDEVSWTAIIMGHALHG 412



 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSK------------------- 123
           LK+ +    L+ G+ VH   ++LG+D ++Y   +L+  Y+K                   
Sbjct: 112 LKSCTMMTDLRLGESVHGCILRLGMDCDLYTCNALMNMYAKLLGMSSKISVGKVFDEMPQ 171

Query: 124 ----NEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISP 291
               +E+   G +   + F  +  K+VV+WN +I+  ++   Y + + L   M    +SP
Sbjct: 172 RNSISEDV--GIDSVRKVFELMPRKDVVSWNTIIAGYAQSGMYENALRLVREMGSNDLSP 229

Query: 292 SRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVF 471
              TL  V+ +  +       K+IHG+ ++ G   +V++GS +V MY K   IE + +VF
Sbjct: 230 DAFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDADVYIGSSLVDMYAKSARIEDSERVF 289

Query: 472 NEIPYRDLGLYNSLIWGFRRKGLESE 549
           + +  RD   +NSL+ G+ + G  +E
Sbjct: 290 SHLSCRDSISWNSLVAGYVQNGRYNE 315


>ref|XP_006369200.1| hypothetical protein POPTR_0001s18710g [Populus trichocarpa]
           gi|550347631|gb|ERP65769.1| hypothetical protein
           POPTR_0001s18710g [Populus trichocarpa]
          Length = 572

 Score =  107 bits (267), Expect = 2e-21
 Identities = 62/188 (32%), Positives = 105/188 (55%), Gaps = 5/188 (2%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHG---FEHAWRSFC 171
           LK+ +    LK G+ +H   I+LG+D ++Y   +L+  Y K ++        +   + F 
Sbjct: 111 LKSCALLSDLKLGESIHGCIIRLGMDFDLYTCNALMNMYGKFQKVDRRGSIMDSVKKVFE 170

Query: 172 KIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGK--NRHK 345
           K+ +++VV+WN +I+  + + +Y   ++L   M    + P   TL  V+ +  +  + HK
Sbjct: 171 KMLKRDVVSWNTVIAGNAENGKYEEALMLVREMRNDNLKPDSFTLSSVLPIFAEYVDLHK 230

Query: 346 GLCKQIHGFALKSGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGF 525
           G  K+IHG+A++ GF  +VF+GS +V MY K   +E A QVFN +P RD   +NS+I G 
Sbjct: 231 G--KEIHGYAMRHGFDNDVFIGSSLVGMYAKCARVEDALQVFNILPQRDSISWNSIIAGC 288

Query: 526 RRKGLESE 549
            + GL  E
Sbjct: 289 VQNGLFDE 296



 Score =  102 bits (255), Expect = 5e-20
 Identities = 49/170 (28%), Positives = 99/170 (58%)
 Frame = +1

Query: 28  LKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNA 207
           L +G+++H  +++ G D +V++G+SLV  Y+K        E A + F  + +++ ++WN+
Sbjct: 228 LHKGKEIHGYAMRHGFDNDVFIGSSLVGMYAKCAR----VEDALQVFNILPQRDSISWNS 283

Query: 208 MISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSG 387
           +I+ C ++  +  G+  F++ML+ ++ P  V+   ++  C       L KQ+HGF ++ G
Sbjct: 284 IIAGCVQNGLFDEGLRFFHQMLKAKVKPVPVSFSSIMPACANLIALHLGKQLHGFIIRVG 343

Query: 388 FGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
           + +N+FV S +V MY K   I+ AR +F+ +   D+  + ++I G+   G
Sbjct: 344 YDDNMFVSSSLVDMYAKCGYIKVARWIFDRMDVHDMVSWTAIIMGYALHG 393


>ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Capsella rubella]
           gi|482575565|gb|EOA39752.1| hypothetical protein
           CARUB_v10008399mg [Capsella rubella]
          Length = 740

 Score =  107 bits (267), Expect = 2e-21
 Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 27/210 (12%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNE----------------- 129
           LK+ + +   ++GQQ+H   +KLG D ++YV TSL+  Y KN                  
Sbjct: 140 LKSCAKSRAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRLEDARKVFDQSSHRDV 199

Query: 130 -------EGY--HGF-EHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLET 279
                  +GY  +G+ E A + F +I  K+VV+WNA+IS  +    Y   + LF  M++T
Sbjct: 200 VSYTALIKGYASNGYIESAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMQT 259

Query: 280 RISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFGENVFVGSGIVAMYEKVEEIEFA 459
            + P   T+  V+  CG++    L +Q+H +    GFG N+ + + ++ +Y K  E+E A
Sbjct: 260 NVKPDESTMVTVLSACGQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 319

Query: 460 RQVFNEIPYRDLGLYNSLIWGFRRKGLESE 549
             +F  + Y+D+  +N+LI G+    L  E
Sbjct: 320 SGLFEGLSYKDVISWNTLIGGYTHMNLYKE 349



 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 49/164 (29%), Positives = 83/164 (50%)
 Frame = +1

Query: 46  VHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACS 225
           +HA  IK G+    Y  + L+EF   +   + G  +A   F  I E N++ WN M    +
Sbjct: 51  IHAQMIKTGLHNTNYALSKLIEFCVLSPH-FDGLTYAISVFESIQEPNLLIWNTMFRGHA 109

Query: 226 RHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQIHGFALKSGFGENVF 405
             +     + L+  M+   + P+  T   ++  C K+R     +QIHG  LK G   +++
Sbjct: 110 LSSDPVSALYLYVCMISLGLVPNSYTFPFLLKSCAKSRAFREGQQIHGHVLKLGCDLDLY 169

Query: 406 VGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRKG 537
           V + ++AMY K   +E AR+VF++  +RD+  Y +LI G+   G
Sbjct: 170 VHTSLIAMYVKNGRLEDARKVFDQSSHRDVVSYTALIKGYASNG 213



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 2/181 (1%)
 Frame = +1

Query: 1   LKAMSSACWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH 180
           L A   +  ++ G+QVH+     G   N+ +  +L++ Y K  E     E A   F  + 
Sbjct: 272 LSACGQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE----VETASGLFEGLS 327

Query: 181 EKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMCGKNRHKGLCKQ 360
            K+V++WN +I   +    Y   ++LF  ML     P+ VT+  ++  C       + + 
Sbjct: 328 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRLGEIPNEVTMLSILPACAHLGAIDIGRW 387

Query: 361 IHGFALK--SGFGENVFVGSGIVAMYEKVEEIEFARQVFNEIPYRDLGLYNSLIWGFRRK 534
           IH +  K   G      + + ++ MY K  +IE A+QVF+ +  R L  +N++I+GF   
Sbjct: 388 IHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMH 447

Query: 535 G 537
           G
Sbjct: 448 G 448