BLASTX nr result

ID: Ephedra25_contig00020176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00020176
         (458 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006844098.1| hypothetical protein AMTR_s00006p00253660 [A...    60   4e-07
gb|ESW30781.1| hypothetical protein PHAVU_002G181900g [Phaseolus...    58   1e-06
ref|XP_006601078.1| PREDICTED: DNA topoisomerase 3-alpha-like is...    56   4e-06
ref|XP_003551158.1| PREDICTED: DNA topoisomerase 3-alpha-like is...    56   4e-06
ref|XP_006596164.1| PREDICTED: uncharacterized protein LOC100778...    55   7e-06
ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...    55   7e-06
emb|CAN69619.1| hypothetical protein VITISV_001620 [Vitis vinifera]    55   1e-05

>ref|XP_006844098.1| hypothetical protein AMTR_s00006p00253660 [Amborella trichopoda]
            gi|548846497|gb|ERN05773.1| hypothetical protein
            AMTR_s00006p00253660 [Amborella trichopoda]
          Length = 1175

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/66 (39%), Positives = 48/66 (72%)
 Frame = +1

Query: 7    PVMLQRARDGLQIRYQHFFSPVPKKVDPTSITLEMALEFLATSSTKRTGRPTRNRKTKSK 186
            PV+L+ ++ G  IR++H   PVPK V+P +IT++MA+++L++ + K  GRP    K+KS+
Sbjct: 1109 PVVLRISKFGFAIRHRHNIVPVPKNVEPQTITMDMAIKYLSSKNVKYIGRPRGITKSKSQ 1168

Query: 187  ESVDKV 204
            ++++ V
Sbjct: 1169 QALEDV 1174


>gb|ESW30781.1| hypothetical protein PHAVU_002G181900g [Phaseolus vulgaris]
          Length = 1057

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/70 (41%), Positives = 45/70 (64%)
 Frame = +1

Query: 4    KPVMLQRARDGLQIRYQHFFSPVPKKVDPTSITLEMALEFLATSSTKRTGRPTRNRKTKS 183
            +PV+++ AR G  +R++   + VPK + PT +TLE ALEFL+    +R+GRP    K KS
Sbjct: 991  QPVIIKLARVGFSVRHRRTIASVPKNIKPTDVTLEKALEFLSGKDVRRSGRP----KGKS 1046

Query: 184  KESVDKVLQA 213
            K    +V++A
Sbjct: 1047 KAQEVEVIEA 1056


>ref|XP_006601078.1| PREDICTED: DNA topoisomerase 3-alpha-like isoform X4 [Glycine max]
          Length = 1068

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/65 (40%), Positives = 42/65 (64%)
 Frame = +1

Query: 4    KPVMLQRARDGLQIRYQHFFSPVPKKVDPTSITLEMALEFLATSSTKRTGRPTRNRKTKS 183
            +PV+L+ AR GL +R++   + VPK V P+ +TLE ALE+L+    +R+GRP    K + 
Sbjct: 1002 QPVILKLARAGLCVRHRRTVASVPKNVKPSDVTLEKALEYLSGDDVRRSGRPKGKSKVQE 1061

Query: 184  KESVD 198
             E ++
Sbjct: 1062 VEVIE 1066


>ref|XP_003551158.1| PREDICTED: DNA topoisomerase 3-alpha-like isoform X1 [Glycine max]
            gi|571537933|ref|XP_006601076.1| PREDICTED: DNA
            topoisomerase 3-alpha-like isoform X2 [Glycine max]
            gi|571537940|ref|XP_006601077.1| PREDICTED: DNA
            topoisomerase 3-alpha-like isoform X3 [Glycine max]
          Length = 1070

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/65 (40%), Positives = 42/65 (64%)
 Frame = +1

Query: 4    KPVMLQRARDGLQIRYQHFFSPVPKKVDPTSITLEMALEFLATSSTKRTGRPTRNRKTKS 183
            +PV+L+ AR GL +R++   + VPK V P+ +TLE ALE+L+    +R+GRP    K + 
Sbjct: 1004 QPVILKLARAGLCVRHRRTVASVPKNVKPSDVTLEKALEYLSGDDVRRSGRPKGKSKVQE 1063

Query: 184  KESVD 198
             E ++
Sbjct: 1064 VEVIE 1068


>ref|XP_006596164.1| PREDICTED: uncharacterized protein LOC100778913 [Glycine max]
          Length = 1076

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/67 (40%), Positives = 44/67 (65%)
 Frame = +1

Query: 4    KPVMLQRARDGLQIRYQHFFSPVPKKVDPTSITLEMALEFLATSSTKRTGRPTRNRKTKS 183
            +PV+L+ AR G  +R++   + +PK V P+ +TLE ALE+L+    +R+GRP   +K KS
Sbjct: 1010 QPVILRLARAGFCVRHRRTIASIPKNVKPSDVTLEKALEYLSGDDVRRSGRP---KKGKS 1066

Query: 184  KESVDKV 204
            K  V+ +
Sbjct: 1067 KVEVEVI 1073


>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/63 (39%), Positives = 40/63 (63%)
 Frame = +1

Query: 7    PVMLQRARDGLQIRYQHFFSPVPKKVDPTSITLEMALEFLATSSTKRTGRPTRNRKTKSK 186
            PV+L+ A++G  IR++   +PVPK + P  ITLE AL+ L     K++GRP   +K +  
Sbjct: 1123 PVVLKLAKNGFSIRHRRTIAPVPKNIKPNDITLEKALKLLLGKDVKQSGRPKNKKKQEVY 1182

Query: 187  ESV 195
            E++
Sbjct: 1183 EAM 1185


>emb|CAN69619.1| hypothetical protein VITISV_001620 [Vitis vinifera]
          Length = 672

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/61 (39%), Positives = 39/61 (63%)
 Frame = +1

Query: 7   PVMLQRARDGLQIRYQHFFSPVPKKVDPTSITLEMALEFLATSSTKRTGRPTRNRKTKSK 186
           PV+L+ A++G  IR++   +PVPK + P  ITLE AL+ L     K++GRP   +K ++ 
Sbjct: 147 PVVLKLAKNGFSIRHRRTIAPVPKNIKPNDITLEKALKLLLGKDVKQSGRPKNKKKQEAM 206

Query: 187 E 189
           +
Sbjct: 207 Q 207


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