BLASTX nr result

ID: Ephedra25_contig00020166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00020166
         (565 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004333383.1| PHDfinger domain containing protein [Acantha...    59   8e-07

>ref|XP_004333383.1| PHDfinger domain containing protein [Acanthamoeba castellanii str.
           Neff] gi|440790082|gb|ELR11370.1| PHDfinger domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 1415

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
 Frame = +1

Query: 1   PLPRIPESDWFCPLCSVRTKKKKSRRAN---------NASHIQSLGRRGA-SKTKVNDES 150
           PL +IP  DWFCP C+ + +K KS+  +         +ASH  +  +R A  KTK +D+S
Sbjct: 118 PLKKIPSGDWFCPSCAEKERKPKSKSKSKATTTTAKKSASHASNGSKRAAKKKTKDDDDS 177

Query: 151 VILRKEESVKRNRVPKGIQKFRLKNGSILENDNAIKHEEEPVSLMQSENENSPEEDD 321
               +EE    +   K  +K    NG  ++    +K E E     + E E+  EED+
Sbjct: 178 ESSEEEEEEVEDTKQKSNKKI---NGKKVKAKAEVKEESEEAEEEEEEGEDEEEEDE 231


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