BLASTX nr result
ID: Ephedra25_contig00020131
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra25_contig00020131 (1302 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 572 e-160 ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 555 e-155 ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 534 e-149 ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 526 e-147 gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 524 e-146 ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 520 e-145 ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 519 e-144 gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 518 e-144 ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 518 e-144 ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 516 e-144 ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 515 e-143 ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 513 e-143 ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 508 e-141 ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 488 e-135 gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Tri... 479 e-132 gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 478 e-132 ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 477 e-132 ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 477 e-132 emb|CBI16226.3| unnamed protein product [Vitis vinifera] 475 e-131 ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s... 473 e-130 >ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1| predicted protein [Physcomitrella patens] Length = 1397 Score = 572 bits (1474), Expect = e-160 Identities = 304/437 (69%), Positives = 351/437 (80%), Gaps = 5/437 (1%) Frame = +2 Query: 2 RLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIALD 181 RL+K DM E AF+ SL F++ I + TR LGL + N PD LE+ A Sbjct: 959 RLTKPDMTSET--VGAFKTSLKKFMDSCIKDNISTRTKLGLPLDCNGGPDQTLLESTATY 1016 Query: 182 ICGFTARQLE-----VFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAG 346 I G T+RQLE VFL+TCIKRYH KR+E GAAVGA+GAQSIGEPGTQMTLKTFHFAG Sbjct: 1017 ISGLTSRQLEICLLQVFLDTCIKRYHMKRVEPGAAVGAVGAQSIGEPGTQMTLKTFHFAG 1076 Query: 347 VASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSI 526 VASMN+TLGVPRIKEIINA+KNISTPIITA L+S ND KAARIVKGRIEKT LGEVAKSI Sbjct: 1077 VASMNITLGVPRIKEIINASKNISTPIITAVLVSGNDEKAARIVKGRIEKTTLGEVAKSI 1136 Query: 527 KTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIF 706 KTVL+ QA ISVKLDM+ I++LQL+I + TVA +I++TPK+K+K N+R++D +KL + Sbjct: 1137 KTVLRASQAIISVKLDMKRIDALQLDINSDTVALAIVQTPKIKLKHVNIRIVDRDKLIVI 1196 Query: 707 PPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGKYNLLVEGTNLAAVMGTQG 886 PP+ D+ K+YF LHSL N LPKVIVKGI +VERAVIN++KG YNLLVEGTNL AVMG G Sbjct: 1197 PPDQDKGKLYFYLHSLCNMLPKVIVKGIPSVERAVINKEKGVYNLLVEGTNLKAVMGISG 1256 Query: 887 VDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQV 1066 V+G TKSNHVIE EQTLGIEAAR IIDEIQYTM SHGM+ID RHMMLLADVMT+KG+V Sbjct: 1257 VNGKLTKSNHVIEAEQTLGIEAARNVIIDEIQYTMGSHGMTIDARHMMLLADVMTYKGEV 1316 Query: 1067 LGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTGLL 1246 LGITRFGIAKMKDSVLMLASFEKTTDHLFDA++HGRVD+IEGVSEC TGL Sbjct: 1317 LGITRFGIAKMKDSVLMLASFEKTTDHLFDAAIHGRVDKIEGVSECIIMGIPMPIGTGLF 1376 Query: 1247 KVRQRVDHLPKLEYAPS 1297 K+RQ+V+ LPKL Y P+ Sbjct: 1377 KIRQKVEKLPKLSYGPT 1393 >ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii] gi|300146624|gb|EFJ13293.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii] Length = 1393 Score = 555 bits (1429), Expect = e-155 Identities = 295/429 (68%), Positives = 340/429 (79%), Gaps = 5/429 (1%) Frame = +2 Query: 23 QPEAGCSAAFRNSLFNFLEKYISNVKKTR--LTLGLSEEKNNDPDLAGLENIALDICGFT 196 Q + CS AF +SL FL K + TR L+L L + N D EN+A ++ G T Sbjct: 965 QDGSECSTAFLDSLRKFLRKEFDTISSTRKRLSLPLDDFGNVDD-----ENVAANVSGLT 1019 Query: 197 ARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 376 +RQLEVFL TCI RYH K+++ G AVGAIGAQSIGEPGTQMTLKTFHFAGVASMN+TLGV Sbjct: 1020 SRQLEVFLNTCIGRYHRKKLDPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGV 1079 Query: 377 PRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVLKPLQAF 556 PRIKEIINA+K ISTPIITAKL+S+NDVKAARIVKGRIEKT LG+VAKSIK VL+P QAF Sbjct: 1080 PRIKEIINASKKISTPIITAKLVSENDVKAARIVKGRIEKTALGDVAKSIKIVLRPGQAF 1139 Query: 557 ISVKLDMRIIESLQLEITAYTVAESILKTPKLK---IKQQNLRVLDHEKLHIFPPEADRL 727 +S+KLDM I SLQL+I A TVAE++LK PK+K +K+Q+++V D + + PE+DR Sbjct: 1140 VSIKLDMDRIYSLQLDIRAETVAEAVLKFPKIKSMKLKEQHVKVNDDRSISLTTPESDRK 1199 Query: 728 KIYFALHSLRNKLPKVIVKGISTVERAVINQDKGKYNLLVEGTNLAAVMGTQGVDGINTK 907 K+ FALHSL+N LPKVIVKGI TVERAVINQ+KGKYNLLVEGTNL AVMGT+GVDG T Sbjct: 1200 KMLFALHSLQNMLPKVIVKGIPTVERAVINQEKGKYNLLVEGTNLKAVMGTEGVDGRETT 1259 Query: 908 SNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQVLGITRFG 1087 SNH+ E + LGIEAAR II EIQYTM SHGMSID RHMMLLADVMT++G++LGITRFG Sbjct: 1260 SNHIFETVEVLGIEAARNGIIKEIQYTMGSHGMSIDQRHMMLLADVMTYRGEILGITRFG 1319 Query: 1088 IAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTGLLKVRQRVD 1267 +AKMKDSVLMLASFEKTTDHLF ASVHGR DQIEGVSEC TGL KVRQ+V Sbjct: 1320 MAKMKDSVLMLASFEKTTDHLFAASVHGRTDQIEGVSECIIMGIPMPLGTGLFKVRQKVG 1379 Query: 1268 HLPKLEYAP 1294 +PKL Y P Sbjct: 1380 RIPKLIYGP 1388 >ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda] gi|548832896|gb|ERM95665.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda] Length = 1383 Score = 534 bits (1375), Expect = e-149 Identities = 281/435 (64%), Positives = 335/435 (77%), Gaps = 4/435 (0%) Frame = +2 Query: 2 RLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIALD 181 RLSK+DM PE GCS AF+ L NF++K + +KKTR LGL E+ + +GLE++A + Sbjct: 944 RLSKHDMTPERGCSMAFKEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGLEHVAAN 1003 Query: 182 ICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASMN 361 I G + +QL VFLETCI RYH KR+EAG A+GAIGAQSIGEPGTQMTLKTFHFAGVASMN Sbjct: 1004 ISGISRQQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN 1063 Query: 362 VTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVLK 541 +TLGVPRIKEI+ A+K ISTPIITA L+ DND K+ARIVKGRIEKT+LGEVAK++K + Sbjct: 1064 ITLGVPRIKEILGASKKISTPIITATLVCDNDEKSARIVKGRIEKTLLGEVAKTVKISVT 1123 Query: 542 PLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLD----HEKLHIFP 709 P QA I++ LDM+ IE+LQ+ I A TVA+SI + K K+ + L+V +KL I Sbjct: 1124 PTQASINITLDMKRIEALQMAIDAKTVADSISENLKAKVSRTKLKVKPTFTLPDKLKILL 1183 Query: 710 PEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGKYNLLVEGTNLAAVMGTQGV 889 PE R ++ ++LH L++ LPK+IVKGI TVERAVIN KGK NLLVEGTNL AVMGT GV Sbjct: 1184 PEIGRKEVLYSLHLLQSLLPKIIVKGIPTVERAVINNVKGKLNLLVEGTNLLAVMGTPGV 1243 Query: 890 DGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQVL 1069 DG NT SNH++E+E TLGIEAARK IIDEIQYTM SHGMSIDLRHMMLLAD+MTF+G VL Sbjct: 1244 DGRNTTSNHIVEVEGTLGIEAARKSIIDEIQYTMKSHGMSIDLRHMMLLADLMTFRGLVL 1303 Query: 1070 GITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTGLLK 1249 GI RFGI KMK+SVLMLASFE+T D LFDA+ GRVD I GVSEC TG+L Sbjct: 1304 GIQRFGITKMKESVLMLASFERTADILFDATTRGRVDTIAGVSECIIMGVPMQIGTGILS 1363 Query: 1250 VRQRVDHLPKLEYAP 1294 V+QR + L KL Y P Sbjct: 1364 VQQRPEQLAKLTYGP 1378 >ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza brachyantha] Length = 1389 Score = 526 bits (1355), Expect = e-147 Identities = 273/431 (63%), Positives = 340/431 (78%) Frame = +2 Query: 2 RLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIALD 181 +LS++D + GCS F+ L +FLE I +K TR L L +E + D + E+IA + Sbjct: 955 KLSEHDASSDDGCSEKFKQLLKDFLEDRIKLLKSTRRALCL-DENHVGKDSSIEESIAAN 1013 Query: 182 ICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASMN 361 I G +A+QL+VFL+TC+ RYHSK++EAGA++GAIGAQSIGEPGTQMTLKTFHFAGVASMN Sbjct: 1014 ISGISAKQLQVFLDTCLSRYHSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMN 1073 Query: 362 VTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVLK 541 VTLGVPRIKEIINAAK ISTPIITA+L+S DV +AR+VKG +EK VLGEVA+ IK VLK Sbjct: 1074 VTLGVPRIKEIINAAKKISTPIITAELLSGKDVLSARVVKGSMEKAVLGEVAEDIKIVLK 1133 Query: 542 PLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPEAD 721 Q + VKLDM+ IE L + I+A +V SIL P++K+K +++RV+D KL ++P D Sbjct: 1134 SSQPNLVVKLDMQRIEDLHMGISADSVQLSILNHPRIKLKSEHVRVIDKAKLRVYPTAID 1193 Query: 722 RLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGKYNLLVEGTNLAAVMGTQGVDGIN 901 + K+ + LH+L++ LPKVIVKGI TVERAVI+Q KY+LLVEGTNL AVMGT GVD + Sbjct: 1194 KSKLLYELHNLKSMLPKVIVKGIPTVERAVISQTGDKYSLLVEGTNLLAVMGTPGVDAMK 1253 Query: 902 TKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQVLGITR 1081 TKSNH++E+ +TLGIEAAR+ IIDEIQYTM SHGM+ID RHMMLLAD+MT+KG++LGITR Sbjct: 1254 TKSNHIMEVNRTLGIEAARRSIIDEIQYTMTSHGMNIDSRHMMLLADLMTYKGEILGITR 1313 Query: 1082 FGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTGLLKVRQR 1261 +GIAKMK SVLMLASFEKT +HLF+AS GR DQIEGVSEC TG+LKVRQR Sbjct: 1314 YGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQR 1373 Query: 1262 VDHLPKLEYAP 1294 +DHLP+ +Y P Sbjct: 1374 LDHLPEFKYQP 1384 >gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis] Length = 1179 Score = 524 bits (1349), Expect = e-146 Identities = 280/438 (63%), Positives = 330/438 (75%), Gaps = 7/438 (1%) Frame = +2 Query: 2 RLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIALD 181 RLSK DM PE GCSAAF+NSL +FL+ Y+ K+T +E + A +NI L Sbjct: 736 RLSKKDMTPEGGCSAAFKNSLKSFLDNYVKAFKRTWDPCESTEGHAKMENSATTKNIVLQ 795 Query: 182 ICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASMN 361 + G TARQLEVFL+TCI RYHSK++EAG A+GAIGAQSIGEPGTQMTLKTFHFAGVASMN Sbjct: 796 LSGATARQLEVFLDTCISRYHSKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN 855 Query: 362 VTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVLK 541 VTLGVPRIKEIIN AK ISTPIITA L DN+V ARIV+GRIEK LG+VAKSIKTV+ Sbjct: 856 VTLGVPRIKEIINGAKKISTPIITAILECDNNVNFARIVRGRIEKISLGQVAKSIKTVMT 915 Query: 542 PLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPEAD 721 A + + LDM I+ L I A V +SIL+TP++K+K++++RVLD +KL I P E++ Sbjct: 916 SRVASVVITLDMERIQDALLSIDANVVRDSILQTPRIKLKKEHIRVLDFKKLEILPYESN 975 Query: 722 RLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKG-------KYNLLVEGTNLAAVMGT 880 R K+Y L L L ++VKGI TVERAVI+ +K KY LLVEGT L VMGT Sbjct: 976 RSKLYHHLQFLAKMLQNILVKGIKTVERAVISSEKDKKTDISKKYKLLVEGTGLLGVMGT 1035 Query: 881 QGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKG 1060 +GVDG NTK+NH+IE++QTLGIEAAR CIIDEI+YTM SHGMSID RHMMLLADVMT +G Sbjct: 1036 EGVDGRNTKTNHIIEVQQTLGIEAARTCIIDEIEYTMKSHGMSIDTRHMMLLADVMTSRG 1095 Query: 1061 QVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTG 1240 +VLGITRFGI KM SVLMLASFEKT DHLF+ASV+GR D+IEGVSEC TG Sbjct: 1096 EVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGREDKIEGVSECIIMGIPMQIGTG 1155 Query: 1241 LLKVRQRVDHLPKLEYAP 1294 ++KVRQRVD P L Y P Sbjct: 1156 MIKVRQRVDVPPMLSYGP 1173 >ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum lycopersicum] Length = 1390 Score = 520 bits (1340), Expect = e-145 Identities = 277/442 (62%), Positives = 343/442 (77%), Gaps = 11/442 (2%) Frame = +2 Query: 2 RLSKYDMQPEAGCSAAFRNSLFNFLEKYISN-VKKTRLTLGLSEEKNNDPDLAGLENIAL 178 RLS +DM PE GCS AFR SL +FL K ++ +K R +L L EE+ D LE I L Sbjct: 945 RLSYHDMTPEGGCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYLEKIVL 1004 Query: 179 DICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASM 358 +I G T +QL+VFL TCI RYH KR+EAG A+GAIGAQSIGEPGTQMTLKTFHFAGVASM Sbjct: 1005 NISGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1064 Query: 359 NVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVL 538 NVTLGVPRIKEIINAAK I+TPIITAKL+S ++ AAR++K RIEKT+LG+VAKS+K VL Sbjct: 1065 NVTLGVPRIKEIINAAKKITTPIITAKLLSAGNLTAARMIKARIEKTLLGQVAKSVKIVL 1124 Query: 539 KPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPEA 718 A I++ LDM I+ QL I AYTV +SIL+T K+K+K+ ++VL+ KL +F P+A Sbjct: 1125 ASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVF-PQA 1183 Query: 719 DRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGK----------YNLLVEGTNLAA 868 ++ K++F LH L+NKLP V+VKGI+TV+RAV+N+++ K Y LLVEGT L A Sbjct: 1184 NKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLA 1243 Query: 869 VMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVM 1048 VMG +GVDG TKSNH++E++ TLGIEAAR IIDEI YTM+SHGM+IDLRHMMLLAD+M Sbjct: 1244 VMGIEGVDGRYTKSNHIMEVQHTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLM 1303 Query: 1049 TFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXX 1228 T+KG+VLGITR G+ KMKDSVLMLASFEKTTDHLF+ASV+GR D+IEGV+EC Sbjct: 1304 TYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMT 1363 Query: 1229 XXTGLLKVRQRVDHLPKLEYAP 1294 TG+ K+RQRV+H+ +L Y P Sbjct: 1364 IGTGMFKLRQRVEHV-ELNYQP 1384 >ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X1 [Solanum tuberosum] Length = 1394 Score = 519 bits (1336), Expect = e-144 Identities = 277/442 (62%), Positives = 343/442 (77%), Gaps = 11/442 (2%) Frame = +2 Query: 2 RLSKYDMQPEAGCSAAFRNSLFNFLEKYISN-VKKTRLTLGLSEEKNNDPDLAGLENIAL 178 RLS +DM PE GCS AFR+SL +FL K ++ +K R +L L EE+ D LE IAL Sbjct: 945 RLSYHDMTPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIAL 1004 Query: 179 DICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASM 358 +I G T RQL+VFL TCI RYH KR+EAG A+GAIGAQSIGEPGTQMTLKTFHFAGVASM Sbjct: 1005 NISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1064 Query: 359 NVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVL 538 NVTLGVPRIKEIINAAK I+TPIIT KL+S ++ AAR++K RIEKT+LG+VAKS+K VL Sbjct: 1065 NVTLGVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVL 1124 Query: 539 KPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPEA 718 A I++ LDM I+ QL I AYTV +SIL+T K+K+K+ ++VL+ KL +F P+A Sbjct: 1125 ASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVF-PQA 1183 Query: 719 DRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGK----------YNLLVEGTNLAA 868 ++ K++F LH L+NKLP V+VKGI+TV+RAV+N+++ K Y LLVEGT L A Sbjct: 1184 NKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLA 1243 Query: 869 VMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVM 1048 VMG +GVDG TKSNH++E++ TLGIEAAR IIDEI YTM+SHGM+IDLRHMMLLAD+M Sbjct: 1244 VMGIEGVDGRYTKSNHIMEVQNTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLM 1303 Query: 1049 TFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXX 1228 T+KG+VLGITR G+ KMKDSVLMLASFEKTTDHLF+ASV+GR D+IEGV+EC Sbjct: 1304 TYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMT 1363 Query: 1229 XXTGLLKVRQRVDHLPKLEYAP 1294 TG+ K+RQRV+ + +L Y P Sbjct: 1364 IGTGMFKLRQRVEQV-ELNYQP 1384 >gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group] Length = 1321 Score = 518 bits (1335), Expect = e-144 Identities = 271/435 (62%), Positives = 338/435 (77%), Gaps = 4/435 (0%) Frame = +2 Query: 2 RLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIALD 181 +LS++D + GCS F+ L FLE I +K TR L L E+ + + E+IA + Sbjct: 882 KLSEHDASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAAN 941 Query: 182 ICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASMN 361 I G + +QL+VFL+TC+ RYH K++EAGA++GAIGAQSIGEPGTQMTLKTFHFAGVASMN Sbjct: 942 ISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMN 1001 Query: 362 VTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVLK 541 VTLGVPRIKEIINAAK ISTPIITA+L+S+ DV +ARIVKG +EK VLGEVA++IK VLK Sbjct: 1002 VTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLK 1061 Query: 542 PLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPEAD 721 Q + VKLDM+ IE+L + I+A +V SIL PK+K+K +++RV+D KL I+P D Sbjct: 1062 SSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGID 1121 Query: 722 RLKIYFALHSLRNKLPKVIVKGISTVERAVIN----QDKGKYNLLVEGTNLAAVMGTQGV 889 + K+ + LH L++ LPKVIVKGI TVERAVI+ ++ +Y LLVEGTNL AVMGT GV Sbjct: 1122 KSKLLYELHHLKSMLPKVIVKGIPTVERAVISETGEENDKRYKLLVEGTNLLAVMGTPGV 1181 Query: 890 DGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQVL 1069 D + TKSNH++E+ +TLGIEAAR+ IIDEIQYTM SHGM+ID RHMMLLAD+MT+KG++L Sbjct: 1182 DAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEIL 1241 Query: 1070 GITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTGLLK 1249 GITR+GIAKMK SVLMLASFEKT +HLF+AS GR DQIEGVSEC TG+LK Sbjct: 1242 GITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILK 1301 Query: 1250 VRQRVDHLPKLEYAP 1294 VRQR+DHLP+ +Y P Sbjct: 1302 VRQRLDHLPEFKYQP 1316 >ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa Japonica Group] gi|38347455|emb|CAD41360.2| OSJNBa0076N16.24 [Oryza sativa Japonica Group] gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa Japonica Group] gi|116310339|emb|CAH67354.1| OSIGBa0130B08.14 [Oryza sativa Indica Group] gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa Indica Group] gi|215768005|dbj|BAH00234.1| unnamed protein product [Oryza sativa Japonica Group] gi|218195112|gb|EEC77539.1| hypothetical protein OsI_16437 [Oryza sativa Indica Group] Length = 1383 Score = 518 bits (1335), Expect = e-144 Identities = 271/435 (62%), Positives = 338/435 (77%), Gaps = 4/435 (0%) Frame = +2 Query: 2 RLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIALD 181 +LS++D + GCS F+ L FLE I +K TR L L E+ + + E+IA + Sbjct: 944 KLSEHDASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAAN 1003 Query: 182 ICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASMN 361 I G + +QL+VFL+TC+ RYH K++EAGA++GAIGAQSIGEPGTQMTLKTFHFAGVASMN Sbjct: 1004 ISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMN 1063 Query: 362 VTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVLK 541 VTLGVPRIKEIINAAK ISTPIITA+L+S+ DV +ARIVKG +EK VLGEVA++IK VLK Sbjct: 1064 VTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLK 1123 Query: 542 PLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPEAD 721 Q + VKLDM+ IE+L + I+A +V SIL PK+K+K +++RV+D KL I+P D Sbjct: 1124 SSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGID 1183 Query: 722 RLKIYFALHSLRNKLPKVIVKGISTVERAVIN----QDKGKYNLLVEGTNLAAVMGTQGV 889 + K+ + LH L++ LPKVIVKGI TVERAVI+ ++ +Y LLVEGTNL AVMGT GV Sbjct: 1184 KSKLLYELHHLKSMLPKVIVKGIPTVERAVISETGEENDKRYKLLVEGTNLLAVMGTPGV 1243 Query: 890 DGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQVL 1069 D + TKSNH++E+ +TLGIEAAR+ IIDEIQYTM SHGM+ID RHMMLLAD+MT+KG++L Sbjct: 1244 DAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEIL 1303 Query: 1070 GITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTGLLK 1249 GITR+GIAKMK SVLMLASFEKT +HLF+AS GR DQIEGVSEC TG+LK Sbjct: 1304 GITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILK 1363 Query: 1250 VRQRVDHLPKLEYAP 1294 VRQR+DHLP+ +Y P Sbjct: 1364 VRQRLDHLPEFKYQP 1378 >ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria italica] Length = 1397 Score = 516 bits (1329), Expect = e-144 Identities = 274/436 (62%), Positives = 335/436 (76%), Gaps = 5/436 (1%) Frame = +2 Query: 2 RLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIALD 181 +L+++ + GCS F+ L FLE+ I +K TR L L E+ D E IA + Sbjct: 957 KLTQHKTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCIEEIIAAN 1016 Query: 182 ICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASMN 361 I G +A+QL+VFL+TC RY+SK +EAGA++GAIGAQSIGEPGTQMTLKTFHFAGVASMN Sbjct: 1017 ISGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMN 1076 Query: 362 VTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVLK 541 VTLGVPRIKEIINAAK ISTPIIT +L+S DV +ARIVKG +EK VLGEVA +IK VLK Sbjct: 1077 VTLGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAIKIVLK 1136 Query: 542 PLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPEAD 721 Q + VKLDM++IE+L + I+A +V SIL PK+K+K +++RV+D KL I+P D Sbjct: 1137 SSQPNLVVKLDMQLIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLRIYPAGTD 1196 Query: 722 RLKIYFALHSLRNKLPKVIVKGISTVERAVINQDK-----GKYNLLVEGTNLAAVMGTQG 886 + K+ LH+L+ LPKVIVKGI TVER VI++ K KYNLLVEGTNL AVMGT G Sbjct: 1197 KSKLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGKLEKYNLLVEGTNLLAVMGTPG 1256 Query: 887 VDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQV 1066 VD NTKSNH++E+ TLGIEAAR+ IIDEIQYTM SHGM+ID+RHMMLLAD+MT+KG+V Sbjct: 1257 VDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADLMTYKGEV 1316 Query: 1067 LGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTGLL 1246 LGITR+GIAKMK SVLMLASFEKT++HLF+AS GR D+IEGVSEC TG+L Sbjct: 1317 LGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPMQLGTGIL 1376 Query: 1247 KVRQRVDHLPKLEYAP 1294 KVRQR+DHLP+L+Y P Sbjct: 1377 KVRQRLDHLPELKYQP 1392 >ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor] gi|241937900|gb|EES11045.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor] Length = 1391 Score = 515 bits (1326), Expect = e-143 Identities = 271/436 (62%), Positives = 335/436 (76%), Gaps = 5/436 (1%) Frame = +2 Query: 2 RLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIALD 181 +L ++D + GCS F+ +L FL+K I +K TR L L E+ D E++A Sbjct: 951 KLLQHDTSSDGGCSEEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCVEESVAAI 1010 Query: 182 ICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASMN 361 I G +A+QL+VFL+TC+ RY SK++EAGA++GAIGAQSIGEPGTQMTLKTFHFAGVASMN Sbjct: 1011 ISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMN 1070 Query: 362 VTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVLK 541 VTLGVPRIKEIINAA+ ISTPIITA+L+S DV +ARIVKG +EK VLGEVA +I+ VLK Sbjct: 1071 VTLGVPRIKEIINAARKISTPIITAQLLSKKDVLSARIVKGSMEKAVLGEVAVAIQIVLK 1130 Query: 542 PLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPEAD 721 Q + VKLDM++IESL + I+A +V SIL PK+K+K +++RV+D KL I+P D Sbjct: 1131 SSQPNLIVKLDMQLIESLHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLRIYPAGTD 1190 Query: 722 RLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGK-----YNLLVEGTNLAAVMGTQG 886 + K+ LH+L++ LPKVIVKGI TVER VI++ K K Y LLVEGTNL AVMGT G Sbjct: 1191 KRKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVKNETERYQLLVEGTNLLAVMGTPG 1250 Query: 887 VDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQV 1066 VD TKSNH++E QTLGIEAAR+ IIDEIQYTM SHGM+ID RHMMLLAD+MT+KG++ Sbjct: 1251 VDATKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEI 1310 Query: 1067 LGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTGLL 1246 LGITR+GIAKMK SVLMLASFEKT++HLF+AS GR DQIEGVSEC TG+L Sbjct: 1311 LGITRYGIAKMKSSVLMLASFEKTSEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGIL 1370 Query: 1247 KVRQRVDHLPKLEYAP 1294 KVRQR+DH+P+ +Y P Sbjct: 1371 KVRQRLDHVPEFKYQP 1386 >ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis vinifera] Length = 1383 Score = 513 bits (1321), Expect = e-143 Identities = 277/430 (64%), Positives = 330/430 (76%), Gaps = 1/430 (0%) Frame = +2 Query: 2 RLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIALD 181 RL +++ E GCS AF+ +L FLE+ K TR LGL E + +L E A + Sbjct: 949 RLKEHNTSAE-GCSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKFAKN 1007 Query: 182 ICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASMN 361 I G T++QL+VFL+TCI RY KR+EAG A+GAIGA SIGEPGTQMTLKTFHFAGVASMN Sbjct: 1008 ISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 1067 Query: 362 VTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVLK 541 VTLGVPRIKEIIN AK ISTPIITA L +N+VK AR+VKGRIE+T LG+VAKSIK VL Sbjct: 1068 VTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLT 1127 Query: 542 PLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPEAD 721 A I+V LDM I++ QL I + V ESIL+ ++K+KQQ+++VLD KL + P+ D Sbjct: 1128 SRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVH-PQGD 1186 Query: 722 RLKIYFALHSLRNKLPKVIVKGISTVERAVINQD-KGKYNLLVEGTNLAAVMGTQGVDGI 898 R I+F LH+L+N LP V+VKGI TVERAVIN+D K KYNLLVEGT L VMGT+GV G Sbjct: 1187 RSTIHFELHALKNLLPTVVVKGIETVERAVINKDNKVKYNLLVEGTGLQTVMGTEGVIGR 1246 Query: 899 NTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQVLGIT 1078 T SNH+IE++QTLGIEAARKCII+EIQYTMASHGMSID+RHMMLLAD+MTF+G+VLGIT Sbjct: 1247 ETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGIT 1306 Query: 1079 RFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTGLLKVRQ 1258 RFGI KM SVLMLASFEKT DHLF+ASV GR D+IEGVSEC TG+LKVRQ Sbjct: 1307 RFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQ 1366 Query: 1259 RVDHLPKLEY 1288 R+ +P+L Y Sbjct: 1367 RLQQVPELSY 1376 >ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis sativus] Length = 1400 Score = 508 bits (1309), Expect = e-141 Identities = 272/446 (60%), Positives = 328/446 (73%), Gaps = 15/446 (3%) Frame = +2 Query: 2 RLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEK--------NNDPDLA 157 RLSK D PE GCS AF SL FL KY+ KK+ TL E ++D D Sbjct: 950 RLSKDDASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESAVDKSIISSSDNDNI 1009 Query: 158 GLEN-IALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTF 334 + N + +I G T RQL+VFL+TC+ RYH+K++EAG A+GAIGAQSIGEPGTQMTLKTF Sbjct: 1010 VIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTF 1069 Query: 335 HFAGVASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEV 514 HFAGVASMNVTLGVPRIKEIIN AK ISTPI+TA L D++V AR+VK RIEKT LG++ Sbjct: 1070 HFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQI 1129 Query: 515 AKSIKTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEK 694 AK I+ V+ A I +KLDM I +L + A V ++IL TPKLK+K +++ VLD K Sbjct: 1130 AKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRK 1189 Query: 695 LHIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKG------KYNLLVEGT 856 L + P +ADR K++F LH L+N LP V+VKGI TV RAVI ++K K++LLVEGT Sbjct: 1190 LRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLLVEGT 1249 Query: 857 NLAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLL 1036 L AVMGT+GVDG NTKSNH+IE++Q LGIEAARKCII+EI+YTM SHGMSID+RHMMLL Sbjct: 1250 GLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLL 1309 Query: 1037 ADVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXX 1216 D+MTF+G+VLGITRFGI KM SVLMLASFEKT DHLF+ASV+GR D+IEGVSEC Sbjct: 1310 GDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMG 1369 Query: 1217 XXXXXXTGLLKVRQRVDHLPKLEYAP 1294 TG+LKVRQRV +L Y P Sbjct: 1370 IPMPLGTGMLKVRQRVSVPQQLPYGP 1395 >ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Brachypodium distachyon] Length = 1392 Score = 488 bits (1255), Expect = e-135 Identities = 264/440 (60%), Positives = 326/440 (74%), Gaps = 7/440 (1%) Frame = +2 Query: 2 RLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIALD 181 +LS+ DM GCS F+ L F E I ++ TR TL L E+ D + E IA + Sbjct: 951 KLSEQDMS-SGGCSDKFKELLTKFFEDRIKMLRSTRRTLHLDEDHVGMKDSSIEERIAAN 1009 Query: 182 ICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASMN 361 I G +A+QL+VFL+TC+ RYHSK +EAGA++GAIGAQSIGEPGTQMTLKTFHFAGVASMN Sbjct: 1010 ISGISAKQLQVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMN 1069 Query: 362 VTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVLK 541 VTLGVPRIKEIINAAKNISTPIITA+L+S D+ A VK +EK VLGEVA IK VLK Sbjct: 1070 VTLGVPRIKEIINAAKNISTPIITAELLSGQDMSFAVKVKRYVEKVVLGEVAAVIKIVLK 1129 Query: 542 PLQAFISVKLDMRIIESL-QLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPEA 718 Q + VKLDM+ IE+ + I++ +V +SI++ PK+K+K +++RV+D KL I+P Sbjct: 1130 SSQPNLVVKLDMQRIEAQGYMGISSDSVQQSIIRHPKIKLKSEHVRVIDGAKLRIYPTGT 1189 Query: 719 DRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDK------GKYNLLVEGTNLAAVMGT 880 D+ K+ LH+L++ LPKVIVKGI TVERAV+N K +YNLLVEGTNL V+GT Sbjct: 1190 DKSKLQLELHTLKSMLPKVIVKGIPTVERAVVNPVKRPDKTLDRYNLLVEGTNLLKVLGT 1249 Query: 881 QGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKG 1060 GVD TKSNH++E+ QTLGIEAAR+ IIDEI+YT S+ M ID RHMMLLAD+MT+KG Sbjct: 1250 PGVDAKKTKSNHIMEVNQTLGIEAARRSIIDEIRYTFESNNMIIDQRHMMLLADLMTYKG 1309 Query: 1061 QVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTG 1240 +VLGITRFGI KMK SVLMLASFEKT +HLF+AS GR D+IEGVSEC +G Sbjct: 1310 EVLGITRFGIVKMKSSVLMLASFEKTLEHLFNASYSGREDEIEGVSECIIMGIPMTLGSG 1369 Query: 1241 LLKVRQRVDHLPKLEYAPSS 1300 +LKVRQR+DHLP+ Y P + Sbjct: 1370 ILKVRQRLDHLPEFNYQPDA 1389 >gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Triticum urartu] Length = 1248 Score = 479 bits (1232), Expect = e-132 Identities = 268/446 (60%), Positives = 327/446 (73%), Gaps = 14/446 (3%) Frame = +2 Query: 2 RLSKYDMQPEAG-CSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIAL 178 +LS+ D P AG CS F+ L F+ I ++ TR L L E+ D + E +A Sbjct: 800 KLSEQD--PSAGGCSDRFKELLTKFVGNRIKMLRNTRRALHLDEDHVGRKDSSIEECVAA 857 Query: 179 DICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASM 358 +I G +A+QL+VFL+TC+ RYHSK +EAGA++GAIGAQSIGEPGTQMTLKTFHFAGVASM Sbjct: 858 NISGISAKQLQVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASM 917 Query: 359 N------VTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAK 520 + VTLGVPRIKEIINAAK ISTPIITA+L+S D VK IEK VLGEVA Sbjct: 918 SILSVLYVTLGVPRIKEIINAAKKISTPIITAELLSGQDESFGVKVKRCIEKVVLGEVAA 977 Query: 521 SIKTVLKPLQAFISVKLDMRIIESLQLE-ITAYTVAESILKTPKLKIKQQNLRVLDHEKL 697 +IK VLK Q + VKLDM+ IE+ E I A +V SI+ PKLK+K Q++RV+D KL Sbjct: 978 AIKIVLKSSQPNLVVKLDMQRIEAQGYEGINADSVQLSIINYPKLKLKSQHVRVIDEAKL 1037 Query: 698 HIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGK------YNLLVEGTN 859 I+P DR K+ F LH+L++ LPKVIVKGI TVERAV+N KG+ YNLLVEGTN Sbjct: 1038 RIYPDGTDRSKLQFELHNLKSMLPKVIVKGIPTVERAVVNPVKGRDKTIERYNLLVEGTN 1097 Query: 860 LAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLA 1039 L AV+G GVD + TKSNH++E+ QTLGIEAAR+ IIDEIQYT S+ M IDLRHMMLLA Sbjct: 1098 LLAVLGAPGVDAMKTKSNHIMEVNQTLGIEAARRSIIDEIQYTFESNNMIIDLRHMMLLA 1157 Query: 1040 DVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXX 1219 D+MT+KG+VLGITR+GIAKMK SVLMLASFEKT++HLF+AS GR DQI+GVSEC Sbjct: 1158 DLMTYKGEVLGITRYGIAKMKSSVLMLASFEKTSEHLFNASYAGREDQIDGVSECIIMGI 1217 Query: 1220 XXXXXTGLLKVRQRVDHLPKLEYAPS 1297 TG+LKVRQR++ LP+ +Y P+ Sbjct: 1218 PMQLGTGILKVRQRLESLPEFKYQPA 1243 >gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii] Length = 1117 Score = 478 bits (1231), Expect = e-132 Identities = 268/446 (60%), Positives = 326/446 (73%), Gaps = 14/446 (3%) Frame = +2 Query: 2 RLSKYDMQPEAG-CSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIAL 178 +LS+ D P AG CS F+ L F+ I ++ TR L L E+ D + E +A Sbjct: 669 KLSEQD--PSAGGCSDRFKELLTKFVGNRIKMLRNTRRALHLDEDHVGRKDSSIEECVAA 726 Query: 179 DICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASM 358 +I G A+QL+VFL+TC+ RYHSK +EAGA++GAIGAQSIGEPGTQMTLKTFHFAGVASM Sbjct: 727 NISGIAAKQLQVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASM 786 Query: 359 N------VTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAK 520 + VTLGVPRIKEIINAAK ISTPIITA+L+S D VK IEK VLGEVA Sbjct: 787 SILSVLYVTLGVPRIKEIINAAKKISTPIITAELLSGQDESFGVKVKRCIEKVVLGEVAA 846 Query: 521 SIKTVLKPLQAFISVKLDMRIIESLQLE-ITAYTVAESILKTPKLKIKQQNLRVLDHEKL 697 +IK VLK Q + VKLDM+ IE+ E I A +V SI+ PKLK+K Q++RV+D KL Sbjct: 847 AIKIVLKSSQPNLVVKLDMQRIEAQGYEGINADSVQLSIINYPKLKLKSQHVRVIDEAKL 906 Query: 698 HIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGK------YNLLVEGTN 859 I+P DR K+ F LH+L++ LPKVIVKGI TVERAV+N KG+ YNLLVEGTN Sbjct: 907 RIYPDGTDRSKLQFELHNLKSMLPKVIVKGIPTVERAVVNPVKGRDKTIERYNLLVEGTN 966 Query: 860 LAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLA 1039 L AV+G GVD + TKSNH++E+ QTLGIEAAR+ IIDEIQYT S+ M IDLRHMMLLA Sbjct: 967 LLAVLGAPGVDAMKTKSNHIMEVNQTLGIEAARRSIIDEIQYTFESNNMIIDLRHMMLLA 1026 Query: 1040 DVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXX 1219 D+MT+KG+VLGITR+GIAKMK SVLMLASFEKT++HLF+AS GR DQI+GVSEC Sbjct: 1027 DLMTYKGEVLGITRYGIAKMKSSVLMLASFEKTSEHLFNASYAGREDQIDGVSECIIMGI 1086 Query: 1220 XXXXXTGLLKVRQRVDHLPKLEYAPS 1297 TG+LKVRQR++ LP+ +Y P+ Sbjct: 1087 PMQLGTGILKVRQRLESLPEFKYQPA 1112 >ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X2 [Citrus sinensis] Length = 1404 Score = 477 bits (1227), Expect = e-132 Identities = 262/429 (61%), Positives = 309/429 (72%), Gaps = 12/429 (2%) Frame = +2 Query: 38 CSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIALDICGFTARQLEVF 217 CS AF NSL F E + K + E+ D LE + G T +QLEVF Sbjct: 972 CSEAFLNSLRKFFEGQQDKLDKK---IKFVEDIGWDDKSQILEEVTHKTSGITEKQLEVF 1028 Query: 218 LETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII 397 ++TC RYH KR+EAG A+GAIGAQSIGEPGTQMTLKTFHFAGVASMN+T GVPRIKEII Sbjct: 1029 IQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEII 1088 Query: 398 NAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVLKPLQAFISVKLDM 577 N AK ISTPIITA+L +++ AAR+VKGRIEKT+LG+VAKSIK V+ A I + LDM Sbjct: 1089 NGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDM 1148 Query: 578 RIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPEADRLKIYFALHSLR 757 I+ L I A V ESI++TPK+K+KQQ+++VLD KL IFPP D+ KI+F L+SL+ Sbjct: 1149 ETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIFPP-VDKSKIHFELYSLK 1207 Query: 758 NKLPKVIVKGISTVERAVI------------NQDKGKYNLLVEGTNLAAVMGTQGVDGIN 901 N LP VIVKGI TVER VI N +K KY LLVEGT L AVMG +G+DG Sbjct: 1208 NVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCK 1267 Query: 902 TKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQVLGITR 1081 TKSNH+ E++QTLGIEAAR CIIDEI TM +HGMSID RHMMLLAD+MTF+G+VLGITR Sbjct: 1268 TKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLGITR 1327 Query: 1082 FGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTGLLKVRQR 1261 FGI KM SVLMLASFEKT DHLF+ASV+GR D+IEGVSEC TG+LK+RQR Sbjct: 1328 FGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKIRQR 1387 Query: 1262 VDHLPKLEY 1288 P L+Y Sbjct: 1388 DAVPPMLKY 1396 >ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina] gi|557526635|gb|ESR37941.1| hypothetical protein CICLE_v10027681mg [Citrus clementina] Length = 1397 Score = 477 bits (1227), Expect = e-132 Identities = 262/429 (61%), Positives = 309/429 (72%), Gaps = 12/429 (2%) Frame = +2 Query: 38 CSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIALDICGFTARQLEVF 217 CS AF NSL F E + K + E+ D LE + G T +QLEVF Sbjct: 965 CSEAFLNSLRKFFEGQQDKLDKK---IKFVEDIGWDDKSQILEEVTHKTSGITEKQLEVF 1021 Query: 218 LETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII 397 ++TC RYH KR+EAG A+GAIGAQSIGEPGTQMTLKTFHFAGVASMN+T GVPRIKEII Sbjct: 1022 IQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEII 1081 Query: 398 NAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVLKPLQAFISVKLDM 577 N AK ISTPIITA+L +++ AAR+VKGRIEKT+LG+VAKSIK V+ A I + LDM Sbjct: 1082 NGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDM 1141 Query: 578 RIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPEADRLKIYFALHSLR 757 I+ L I A V ESI++TPK+K+KQQ+++VLD KL IFPP D+ KI+F L+SL+ Sbjct: 1142 ETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIFPP-VDKSKIHFELYSLK 1200 Query: 758 NKLPKVIVKGISTVERAVI------------NQDKGKYNLLVEGTNLAAVMGTQGVDGIN 901 N LP VIVKGI TVER VI N +K KY LLVEGT L AVMG +G+DG Sbjct: 1201 NVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCK 1260 Query: 902 TKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQVLGITR 1081 TKSNH+ E++QTLGIEAAR CIIDEI TM +HGMSID RHMMLLAD+MTF+G+VLGITR Sbjct: 1261 TKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLGITR 1320 Query: 1082 FGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTGLLKVRQR 1261 FGI KM SVLMLASFEKT DHLF+ASV+GR D+IEGVSEC TG+LK+RQR Sbjct: 1321 FGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKIRQR 1380 Query: 1262 VDHLPKLEY 1288 P L+Y Sbjct: 1381 DAVPPMLKY 1389 >emb|CBI16226.3| unnamed protein product [Vitis vinifera] Length = 1819 Score = 475 bits (1222), Expect = e-131 Identities = 251/364 (68%), Positives = 294/364 (80%), Gaps = 1/364 (0%) Frame = +2 Query: 200 RQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVP 379 ++L VFL+TCI RY KR+EAG A+GAIGA SIGEPGTQMTLKTFHFAGVASMNVTLGVP Sbjct: 1450 KRLGVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVP 1509 Query: 380 RIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVLKPLQAFI 559 RIKEIIN AK ISTPIITA L +N+VK AR+VKGRIE+T LG+VAKSIK VL A I Sbjct: 1510 RIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALI 1569 Query: 560 SVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPEADRLKIYF 739 +V LDM I++ QL I + V ESIL+ ++K+KQQ+++VLD KL + P + DR I+F Sbjct: 1570 AVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVHP-QGDRSTIHF 1628 Query: 740 ALHSLRNKLPKVIVKGISTVERAVINQD-KGKYNLLVEGTNLAAVMGTQGVDGINTKSNH 916 LH+L+N LP V+VKGI TVERAVIN+D K KYNLLVEGT L VMGT+GV G T SNH Sbjct: 1629 ELHALKNLLPTVVVKGIETVERAVINKDNKVKYNLLVEGTGLQTVMGTEGVIGRETTSNH 1688 Query: 917 VIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQVLGITRFGIAK 1096 +IE++QTLGIEAARKCII+EIQYTMASHGMSID+RHMMLLAD+MTF+G+VLGITRFGI K Sbjct: 1689 IIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQK 1748 Query: 1097 MKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTGLLKVRQRVDHLP 1276 M SVLMLASFEKT DHLF+ASV GR D+IEGVSEC TG+LKVRQR+ +P Sbjct: 1749 MDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQRLQQVP 1808 Query: 1277 KLEY 1288 +L Y Sbjct: 1809 ELSY 1812 >ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Fragaria vesca subsp. vesca] Length = 1390 Score = 473 bits (1216), Expect = e-130 Identities = 246/439 (56%), Positives = 317/439 (72%), Gaps = 15/439 (3%) Frame = +2 Query: 2 RLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIALD 181 RLS+ DM P+ GCS F++S+ FL++Y+ ++KT+ L++ + A L+NI + Sbjct: 952 RLSEQDMTPDGGCSMGFKSSIEQFLDEYVKALRKTQEAFLLNQSPGWEVKSATLQNIVQN 1011 Query: 182 ICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASMN 361 I G T RQL+VFL+TCI RYHSK+++AG A+G IGAQSIGEPGTQMTLKTFHFAGVASMN Sbjct: 1012 ISGVTPRQLKVFLDTCISRYHSKKVDAGTAIGVIGAQSIGEPGTQMTLKTFHFAGVASMN 1071 Query: 362 VTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVLK 541 VTLGVPRIKEIIN AKNI TPIIT L DN+ AR+V GRIEKT LG+VA+ I+ V+ Sbjct: 1072 VTLGVPRIKEIINGAKNIHTPIITTVLECDNNPMIARMVAGRIEKTNLGQVAECIEIVMS 1131 Query: 542 PLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPEAD 721 P A++ VKLDM +I+ L I A V +SIL TP++K+K +++RV D++ + + E D Sbjct: 1132 PRAAYVEVKLDMAVIQDAHLSIDANVVKQSILGTPRIKLKHEHIRVPDNQTVEVHSHEKD 1191 Query: 722 RLKIYFALHSLRNKLPKVIVKGISTVERAVINQ---------------DKGKYNLLVEGT 856 R K++F L+ L++ LP VIV+GI T+ER VI++ D+ KY L EG Sbjct: 1192 RRKLHFHLYYLKSILPNVIVRGIKTIERVVIDEEKVKRDKKDIDIKCGDEKKYKLFAEGK 1251 Query: 857 NLAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLL 1036 L AVM T+GVDG T SN +IE++QTLGIEAAR CII+EI+YTM SHGM+ID RHMMLL Sbjct: 1252 GLLAVMSTKGVDGCKTTSNDIIEVQQTLGIEAARTCIIEEIKYTMKSHGMNIDDRHMMLL 1311 Query: 1037 ADVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXX 1216 ADVMTF+G VLGITRFG+ +M SVLMLASFE+T DHLF+ASV G VD+IEGVSE Sbjct: 1312 ADVMTFRGLVLGITRFGVQQMGKSVLMLASFERTDDHLFNASVQGTVDKIEGVSESIIMG 1371 Query: 1217 XXXXXXTGLLKVRQRVDHL 1273 TG+ K++QR+ + Sbjct: 1372 IPMPIGTGMFKIKQRLPEM 1390