BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00020093
         (625 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72453.1| hypothetical protein VITISV_008931 [Vitis vinifera]    89   1e-26
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]    89   2e-26
emb|CAN73953.1| hypothetical protein VITISV_025588 [Vitis vinifera]    88   8e-24
emb|CAN63212.1| hypothetical protein VITISV_002844 [Vitis vinifera]    76   3e-22
emb|CAN60489.1| hypothetical protein VITISV_030840 [Vitis vinifera]    79   3e-22
emb|CAN80340.1| hypothetical protein VITISV_015365 [Vitis vinifera]    82   4e-22
emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]    77   7e-22
emb|CAN62636.1| hypothetical protein VITISV_006313 [Vitis vinifera]    85   2e-21
emb|CAN82468.1| hypothetical protein VITISV_039784 [Vitis vinifera]    78   4e-21
gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa]       73   6e-21
gb|AAY87195.1| reverse transcriptase [Ginkgo biloba]                  105   8e-21
gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subc...    72   1e-20
gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis c...    82   3e-20
gb|AAV44166.1| putative polyprotein [Oryza sativa Japonica Group]      69   6e-20
emb|CAH65871.1| OSIGBa0103I21.4 [Oryza sativa Indica Group]            69   6e-20
gb|ABA97460.1| retrotransposon protein, putative, Ty1-copia subc...    70   1e-19
emb|CAN76379.1| hypothetical protein VITISV_017862 [Vitis vinifera]    81   2e-18
gb|AAY87192.1| reverse transcriptase [Cycas revoluta]                  97   4e-18
gb|AAV59370.1| hypothetical protein [Oryza sativa Japonica Group]      97   4e-18
emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera]    70   4e-18

>emb|CAN72453.1| hypothetical protein VITISV_008931 [Vitis vinifera]
          Length = 977

 Score = 88.6 bits (218), Expect(2) = 1e-26
 Identities = 38/93 (40%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
 Frame = -1

Query: 613 TIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEA---NNKIYRLKKAIYG 443
           TI+ L+++A +M W ++HLDVK  FLNG + EE+++  P+ +E     +K+Y+L KA+YG
Sbjct: 608 TIRLLLALAGQMGWKVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKLHKALYG 667

Query: 442 LRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK 344
           L+QAPR WY+ ++  LI+ G+++ ++   L+ K
Sbjct: 668 LKQAPRAWYSIIDSHLIQLGFRRSENEVTLYLK 700



 Score = 57.4 bits (137), Expect(2) = 1e-26
 Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 21/108 (19%)
 Frame = -2

Query: 279  DNKLSLAKHKKYPIDL--GFKFESKEKANTD-------------------QYRSIVGSVI 163
            D+ L    ++KY +D+   FK ES ++  T                     YRS+VGS++
Sbjct: 715  DDMLVTGSNRKYAMDILKKFKLESCKEVATPLAQNEKISKNDGEKLEEPFAYRSLVGSLL 774

Query: 162  YLTNTRPNIQFVLGYLARWVHNPNLDHLKVAKGVVQYLKVIKSLSLQF 19
            YLT T+P++ F+   L+R++ +P+  H+ VAK V++Y+K  K+L + +
Sbjct: 775  YLTVTKPDLMFLASLLSRFMSSPSNAHMGVAKRVLKYVKGTKNLGIWY 822


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score = 89.4 bits (220), Expect(2) = 2e-26
 Identities = 41/108 (37%), Positives = 72/108 (66%), Gaps = 3/108 (2%)
 Frame = -1

Query: 613  TIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEANNK---IYRLKKAIYG 443
            T+++L+++A  M+W ++  DVK  FLNG + EEV+++ P+ +    K   +YRLKK ++G
Sbjct: 769  TVRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYVSQPEGFIVPGKEEHVYRLKKTLFG 828

Query: 442  LRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK*ENGEI*LF*PSMLI 299
            L+QAPR WY+K++   ++NG+++  S  NL+ K ++  I +   S LI
Sbjct: 829  LKQAPRAWYSKIDSYFVENGFERSKSDPNLYLKRQDDMIYMGSSSFLI 876



 Score = 55.8 bits (133), Expect(2) = 2e-26
 Identities = 23/57 (40%), Positives = 42/57 (73%)
 Frame = -2

Query: 219  ESKEKANTDQYRSIVGSVIYLTNTRPNIQFVLGYLARWVHNPNLDHLKVAKGVVQYL 49
            +  E+A+  ++RS+VG +IYLT+TRP+I F +  ++R++H P+  HL  AK +++Y+
Sbjct: 905  DDTERADARRFRSLVGGLIYLTHTRPDIAFAVEVISRFMHCPSKQHLGAAKRLLRYI 961


>emb|CAN73953.1| hypothetical protein VITISV_025588 [Vitis vinifera]
          Length = 715

 Score = 88.2 bits (217), Expect(2) = 8e-24
 Identities = 41/99 (41%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
 Frame = -1

Query: 622 KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEAN---NKIYRLKKA 452
           K+ +I+ L+S+A   NW +H LDVK  FLNG +EEEVFM+ P  +E +    K+ +LKK+
Sbjct: 443 KINSIRVLLSLAVNSNWPLHQLDVKNVFLNGDLEEEVFMSPPPGFEESFGVGKMCKLKKS 502

Query: 451 IYGLRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK*EN 335
           +YGL+Q+PR W+   ++++   GY +  +   +FYK  N
Sbjct: 503 LYGLKQSPRAWFEHFDKVIKHYGYTQSQADHTMFYKHSN 541



 Score = 48.5 bits (114), Expect(2) = 8e-24
 Identities = 20/58 (34%), Positives = 39/58 (67%)
 Frame = -2

Query: 219 ESKEKANTDQYRSIVGSVIYLTNTRPNIQFVLGYLARWVHNPNLDHLKVAKGVVQYLK 46
           ++K     D+Y+ +VG +IYL++TRP+I F +  + +++H P  +H +V   +++YLK
Sbjct: 564 KAKNVKXXDRYQRLVGRLIYLSHTRPDIAFSVSMVXQFMHVPGPEHFEVVYRILRYLK 621


>emb|CAN63212.1| hypothetical protein VITISV_002844 [Vitis vinifera]
          Length = 900

 Score = 76.3 bits (186), Expect(2) = 3e-22
 Identities = 36/96 (37%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
 Frame = -1

Query: 622 KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEA---NNKIYRLKKA 452
           ++  I+ L++ A   ++ ++ +DVK  FLNG I EEV++  P  +++    N +++LKKA
Sbjct: 71  RLEAIRMLLAFACFKDFVLYQMDVKSAFLNGFINEEVYVEQPPGFQSFNFPNHVFKLKKA 130

Query: 451 IYGLRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK 344
           +Y L+QAPR WY +L + L+K G+K     + LF K
Sbjct: 131 LYRLKQAPRAWYERLSKFLLKKGFKMGKIDTTLFIK 166



 Score = 55.1 bits (131), Expect(2) = 3e-22
 Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
 Frame = -2

Query: 339 KMVKFSSFSLPC*YVEK*IQDNKLSLAKHKKYPIDLGFKFESKEKA---NTDQYRSIVGS 169
           K +K  +F     Y+   ++   +  AK  K P+    K +  EK    ++  YR ++GS
Sbjct: 196 KQLKEGTFINQAKYIRDLLKRFNMEAAKTMKTPMSSSIKLDKDEKGKFIDSTMYRGMIGS 255

Query: 168 VIYLTNTRPNIQFVLGYLARWVHNPNLDHLKVAKGVVQYLKVIKSLSLQF 19
           ++YLT +RP+I + +   AR+   P   HL   K +++YLK    + L +
Sbjct: 256 LLYLTASRPDIMYSVCLCARFQSCPKESHLSAVKRILRYLKGTMDIGLWY 305


>emb|CAN60489.1| hypothetical protein VITISV_030840 [Vitis vinifera]
          Length = 738

 Score = 79.0 bits (193), Expect(2) = 3e-22
 Identities = 37/96 (38%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
 Frame = -1

Query: 622 KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEA---NNKIYRLKKA 452
           ++  I+ L++ A   ++ ++ +DVK  FLNG I EEV++  P  +++    N +++LKKA
Sbjct: 35  RLEAIRMLLAFACFKDFILYQMDVKSAFLNGFINEEVYVEQPPGFQSFNFPNYVFKLKKA 94

Query: 451 IYGLRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK 344
           +YGL+QAPR WY +L + L+K G+K     + LF K
Sbjct: 95  LYGLKQAPRAWYERLSKFLLKKGFKMRKIDTTLFIK 130



 Score = 52.4 bits (124), Expect(2) = 3e-22
 Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
 Frame = -2

Query: 300 YVEK*IQDNKLSLAKHKKYPIDLGFKFESKEKA---NTDQYRSIVGSVIYLTNTRPNIQF 130
           Y++  ++   +  AK  K P+    K +  EK    ++  YR ++GS++YLT +RP+I +
Sbjct: 167 YIKDLLKRFNMEEAKVMKTPMSSSIKLDMDEKGKSIDSTMYRGMIGSLLYLTASRPDIMY 226

Query: 129 VLGYLARWVHNPNLDHLKVAKGVVQYLKVIKSLSLQF 19
            +   AR+   P   HL   K +++YLK   ++ L +
Sbjct: 227 SVCLCARFQSCPKESHLSAVKRILRYLKGTMNIGLWY 263


>emb|CAN80340.1| hypothetical protein VITISV_015365 [Vitis vinifera]
          Length = 683

 Score = 82.4 bits (202), Expect(2) = 4e-22
 Identities = 36/101 (35%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
 Frame = -1

Query: 622 KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYE---ANNKIYRLKKA 452
           K+ T++ L+S+A  +NW +HH +VK  FL   +EEEV+M+ P  Y      N++ +L++A
Sbjct: 376 KLNTVRVLISLATNLNWPLHHFNVKNAFLYDRLEEEVYMDIPPGYSVTMGTNEVCKLQQA 435

Query: 451 IYGLRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK*ENGE 329
           +YGL+Q+PR W+ +    + K G+++ ++   LF K + G+
Sbjct: 436 LYGLKQSPRAWFGQFSLAMKKYGFQQSNANHTLFLKKQQGK 476



 Score = 48.5 bits (114), Expect(2) = 4e-22
 Identities = 23/72 (31%), Positives = 43/72 (59%)
 Frame = -2

Query: 225 KFESKEKANTDQYRSIVGSVIYLTNTRPNIQFVLGYLARWVHNPNLDHLKVAKGVVQYLK 46
           K + KE      + S VG +IYL++TRP+I +V+  +++++H P+ +H++    +++YLK
Sbjct: 472 KQQGKEMILKKSHGSKVGKLIYLSHTRPDIAYVVSIVSQFMHCPSEEHMEAVIRILRYLK 531

Query: 45  VIKSLSLQFKGN 10
                 L F  N
Sbjct: 532 SSLGKGLMFSKN 543


>emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]
          Length = 1885

 Score = 76.6 bits (187), Expect(2) = 7e-22
 Identities = 35/96 (36%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
 Frame = -1

Query: 622  KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEA---NNKIYRLKKA 452
            ++  I+ L++ A   ++ ++ +DVK  FLNG I EE+++  P  +++    N +++LKKA
Sbjct: 1049 RLEAIRMLLAFACFKDFILYQMDVKSAFLNGFINEEIYVEQPPGFQSFNFPNHVFKLKKA 1108

Query: 451  IYGLRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK 344
            +YGL+QAPR WY +L + L+K  +K     + LF K
Sbjct: 1109 LYGLKQAPRAWYERLSKFLLKKSFKMGKIDTTLFIK 1144



 Score = 53.5 bits (127), Expect(2) = 7e-22
 Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
 Frame = -2

Query: 300  YVEK*IQDNKLSLAKHKKYPIDLGFKFESKEKA---NTDQYRSIVGSVIYLTNTRPNIQF 130
            Y++  ++   +  AK  K P+    K +  EK    ++  YR ++GS++YLT +RP+I +
Sbjct: 1181 YIKDLLKRFNMGEAKVMKTPMSSSIKLDMDEKGKSIDSTMYRGMIGSLLYLTASRPDIMY 1240

Query: 129  VLGYLARWVHNPNLDHLKVAKGVVQYLKVIKSLSLQF 19
             +   AR+   P   HL   K +++YLK   S+ L +
Sbjct: 1241 SVCLCARFQSCPKESHLSAVKRILRYLKGTMSIGLWY 1277


>emb|CAN62636.1| hypothetical protein VITISV_006313 [Vitis vinifera]
          Length = 1246

 Score = 84.7 bits (208), Expect(2) = 2e-21
 Identities = 38/98 (38%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
 Frame = -1

Query: 622  KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEAN--NKIYRLKKAI 449
            K+ T++ L+SIA  ++W +  LDVK  FLNG +EEEV+M+ P  ++ +  +K+ +LKK++
Sbjct: 862  KLNTVRVLLSIAANLDWPLQQLDVKNAFLNGNLEEEVYMDPPPGFDEHFGSKVCKLKKSL 921

Query: 448  YGLRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK*EN 335
            YGL+Q+PR W+    + +   GY +  S   +F K  N
Sbjct: 922  YGLKQSPRAWFEXFTQFVKNQGYVQAQSDHTMFIKHSN 959



 Score = 43.9 bits (102), Expect(2) = 2e-21
 Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
 Frame = -2

Query: 300  YVEK*IQDNKLSLAKHKKYPIDLGFKFESKEKAN---TDQYRSIVGSVIYLTNTRPNIQF 130
            Y+   +++  +S  +    PID   K    +  N   T  Y+ +VG +IYL++T P+I F
Sbjct: 994  YILDLLKETGMSGCRPADTPIDPNQKLGDTKDGNLVNTTXYQKLVGKLIYLSHTXPDIAF 1053

Query: 129  VLGYLARWVHNPNLDHLKVAKGVVQYLKVIKSLSLQFK 16
             +  +++++ +    HL+    +++YLK      L FK
Sbjct: 1054 AVSIVSQFMXSXYEVHLEAVYRILRYLKSTPGKGLFFK 1091


>emb|CAN82468.1| hypothetical protein VITISV_039784 [Vitis vinifera]
          Length = 906

 Score = 77.8 bits (190), Expect(2) = 4e-21
 Identities = 37/103 (35%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
 Frame = -1

Query: 622 KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEANNK----IYRLKK 455
           K+ TI+ L+S+A  ++W++   DVK  FL+G + EEV+M+ P     + K    + +LKK
Sbjct: 521 KINTIRVLLSLAANLDWSLQQFDVKNVFLHGELSEEVYMDLPPGCMVSEKQCQKVCKLKK 580

Query: 454 AIYGLRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK*ENGEI 326
           ++YGL+Q+PR W+ +  + +   GY++ +S   LF K ++G+I
Sbjct: 581 SLYGLKQSPRAWFGRFTKSMRAFGYRQSNSDHTLFLKKQHGKI 623



 Score = 49.7 bits (117), Expect(2) = 4e-21
 Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
 Frame = -2

Query: 243 PIDLGFKF-ESKEKANTDQ--YRSIVGSVIYLTNTRPNIQFVLGYLARWVHNPNLDHLKV 73
           PI+ G K      + +TD+  Y+ +VG ++YL +TRP++ + L  +++++HNP   H+  
Sbjct: 662 PIEEGXKLCVEPNQVSTDKGRYQRLVGRLMYLAHTRPDLAYALSVVSQYMHNPGEQHMNA 721

Query: 72  AKGVVQYLKVIKSLSLQFKGN 10
              +++YLK      + F  N
Sbjct: 722 VMRILRYLKNAPGKGILFTKN 742


>gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa]
          Length = 931

 Score = 72.8 bits (177), Expect(2) = 6e-21
 Identities = 33/96 (34%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
 Frame = -1

Query: 622 KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEA---NNKIYRLKKA 452
           K  +++ ++++    N  +H +DVK  FLNG +EEEV+M+ P+ + A    N + +L+K+
Sbjct: 608 KKDSLRIVLALVAHYNLELHQMDVKTAFLNGELEEEVYMDQPEGFVATGNENLVCKLRKS 667

Query: 451 IYGLRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK 344
           IYGL+QA R WY K  +++   G+ ++     ++YK
Sbjct: 668 IYGLKQASRQWYFKFNDIITSYGFVEIIVDRCIYYK 703



 Score = 54.3 bits (129), Expect(2) = 6e-21
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
 Frame = -2

Query: 243 PIDLGFKFESKEKANTD---------QYRSIVGSVIYL-TNTRPNIQFVLGYLARWVHNP 94
           PI  G KF   +    +          Y S+VGS+ Y+ T TRP+I F +G L R+  NP
Sbjct: 710 PIQKGDKFSEMQCPKNELERKEMKKVSYASVVGSLNYVQTCTRPDISFAVGMLGRYQSNP 769

Query: 93  NLDHLKVAKGVVQYLKVIKSLSLQFK 16
            +DH K AK V++YL+  K   L ++
Sbjct: 770 GMDHWKAAKKVLRYLQGTKDHMLTYR 795


>gb|AAY87195.1| reverse transcriptase [Ginkgo biloba]
          Length = 143

 Score =  105 bits (263), Expect = 8e-21
 Identities = 48/102 (47%), Positives = 69/102 (67%), Gaps = 3/102 (2%)
 Frame = -1

Query: 622 KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEANNK---IYRLKKA 452
           KM TI+ ++++A +  W +H +DVK  FLNG + EEV+M  P  ++   K   + RLKKA
Sbjct: 26  KMITIRVVLALAAQFRWELHQMDVKSAFLNGDLTEEVYMEQPPGFQVKGKETLVCRLKKA 85

Query: 451 IYGLRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK*ENGEI 326
           +YGL+QAPR WY K+++  +KNGY K  S SNL+ K  NG+I
Sbjct: 86  LYGLKQAPRAWYKKIDDYFMKNGYNKSSSDSNLYIKVRNGQI 127


>gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1151

 Score = 71.6 bits (174), Expect(2) = 1e-20
 Identities = 33/101 (32%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
 Frame = -1

Query: 622  KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEA---NNKIYRLKKA 452
            ++ TI+ L+S+A      +H +DVK  FLNG ++EE++M+ P  +       K+ +L K+
Sbjct: 751  RLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKS 810

Query: 451  IYGLRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK*ENGE 329
            +YGL+QAP+ W+ K ++ L   G+   ++   ++Y+   GE
Sbjct: 811  LYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGE 851



 Score = 54.7 bits (130), Expect(2) = 1e-20
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
 Frame = -2

Query: 300  YVEK*IQDNKLSLAKHKKYPIDLGFKFESKEKANTDQ--YRSIVGSVIYLTN-TRPNIQF 130
            YVEK +       +K    P D        ++   +Q  Y  I+GS++YLT+ TRP+I F
Sbjct: 873  YVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLTSATRPDISF 932

Query: 129  VLGYLARWVHNPNLDHLKVAKGVVQYLKVIKSLSLQFKGNP 7
             +  L+R+  NP  DH +  + V++YLK    L L + G P
Sbjct: 933  AVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYP 973


>gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 286

 Score = 82.0 bits (201), Expect(2) = 3e-20
 Identities = 37/102 (36%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
 Frame = -1

Query: 622 KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYY---EANNKIYRLKKA 452
           ++ T++ ++S+A +  W IH +DVK  FLNG +EEEV++  P+ Y      +K+ +LKKA
Sbjct: 85  RLETVRLIISLAAQNEWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIIKGEEDKVLKLKKA 144

Query: 451 IYGLRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK*ENGEI 326
           +YGL+QAPR W T++++   +  + K      L+ K +  +I
Sbjct: 145 LYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDI 186



 Score = 42.7 bits (99), Expect(2) = 3e-20
 Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
 Frame = -2

Query: 300 YVEK*IQDNKLSLAKHKKYPIDLGFKF---ESKEKANTDQYRSIVGSVIYLTNTRPNIQF 130
           Y +K ++  K+  +     P++ G KF   E  E+ +   ++S+VGS+ YLT TRP+I +
Sbjct: 218 YAKKVLKRFKMDDSNPVSTPMECGIKFSKNEEGERVDPTLFKSLVGSLRYLTCTRPDILY 277

Query: 129 VLGYLARWV 103
            +G ++R++
Sbjct: 278 AVGVVSRYM 286


>gb|AAV44166.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1342

 Score = 69.3 bits (168), Expect(2) = 6e-20
 Identities = 33/101 (32%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
 Frame = -1

Query: 622  KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEANNK---IYRLKKA 452
            ++ TI+ L+++A      +H +DVK  FLNG +EEE++M+ P  Y    +   + +L K+
Sbjct: 962  RLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQEGMMCKLLKS 1021

Query: 451  IYGLRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK*ENGE 329
            +YGL+QAP+ W+ K +  L   G+   ++   ++Y+   GE
Sbjct: 1022 LYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGGE 1062



 Score = 54.3 bits (129), Expect(2) = 6e-20
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
 Frame = -2

Query: 243  PIDLGFKFESKEKANTDQ--YRSIVGSVIYLTN-TRPNIQFVLGYLARWVHNPNLDHLKV 73
            P D        ++   DQ  Y  I+GS++YL + TRP+I F +  L+R+V NP  DH + 
Sbjct: 1101 PYDPSVLLRKNQRIARDQLRYSQIIGSLMYLASATRPDISFAVSKLSRFVSNPEDDHWQA 1160

Query: 72   AKGVVQYLKVIKSLSLQFKGNP 7
             K V++YLK   S  + + G P
Sbjct: 1161 LKRVMRYLKGTMSYGIHYTGYP 1182


>emb|CAH65871.1| OSIGBa0103I21.4 [Oryza sativa Indica Group]
          Length = 964

 Score = 69.3 bits (168), Expect(2) = 6e-20
 Identities = 33/101 (32%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
 Frame = -1

Query: 622 KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEANNK---IYRLKKA 452
           ++ TI+ L+++A      +H +DVK  FLNG +EEE++M+ P  Y    +   + +L K+
Sbjct: 596 RLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDRYVLKGQEGMVCKLLKS 655

Query: 451 IYGLRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK*ENGE 329
           +YGL+QAP+ W+ K +  L   G+   ++   ++Y    GE
Sbjct: 656 LYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYHYGGGE 696



 Score = 54.3 bits (129), Expect(2) = 6e-20
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
 Frame = -2

Query: 300  YVEK*IQDNKLSLAKHKKYPIDLGFKFESKEKANTDQ--YRSIVGSVIYLTN-TRPNIQF 130
            YV+K +     S  K    P D         +   DQ  Y  I+GS++YL + TRP+I F
Sbjct: 735  YVDKVLSCFGYSDCKPAPTPYDPSVLLRKNRRIVRDQLRYSQIIGSLMYLASATRPDISF 794

Query: 129  VLGYLARWVHNPNLDHLKVAKGVVQYLKVIKSLSLQFKGNP 7
             +  L+R+V NP  DH +  + V++YLK   S ++ + G P
Sbjct: 795  AVSKLSRFVSNPRDDHWQALERVMRYLKGTMSYAIHYTGYP 835


>gb|ABA97460.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 786

 Score = 70.5 bits (171), Expect(2) = 1e-19
 Identities = 33/101 (32%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
 Frame = -1

Query: 622 KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEA---NNKIYRLKKA 452
           ++ TI  L+S+A      +H +DVK  FLNG ++EE++M+ P  +       K+ +L K+
Sbjct: 263 RLTTIHVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKS 322

Query: 451 IYGLRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK*ENGE 329
           +YGL+QAP+ W+ K ++ L   G+   ++   ++Y+   GE
Sbjct: 323 LYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGE 363



 Score = 52.4 bits (124), Expect(2) = 1e-19
 Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
 Frame = -2

Query: 300 YVEK*IQDNKLSLAKHKKYPIDLGFKFESKEKA--NTDQYRSIVGSVIYLTN-TRPNIQF 130
           YVEK +       +K    P D        ++   N  QY  I+GS++YL + TRP+I F
Sbjct: 389 YVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLQYSQIIGSLMYLASATRPDISF 448

Query: 129 VLGYLARWVHNPNLDHLKVAKGVVQYLKVIKSLSLQFKGNP 7
            +  L+R+  NP  DH    + +++YLK    L L + G P
Sbjct: 449 AVSKLSRFTSNPGDDHWHALERIMRYLKGTIELGLHYSGYP 489


>emb|CAN76379.1| hypothetical protein VITISV_017862 [Vitis vinifera]
          Length = 639

 Score = 81.3 bits (199), Expect(2) = 2e-18
 Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
 Frame = -1

Query: 568 IHHLDVKCTFLNGGIEEEVFMNSPKYYEANN---KIYRLKKAIYGLRQAPRVWYTKLEEL 398
           I+ LDVK  FL+G + EEVF+  P+ YE  +   K+Y+LKKA+YGL+QAPR W++++E  
Sbjct: 44  IYQLDVKSAFLHGELSEEVFVEQPRGYEQKDNLHKVYKLKKALYGLKQAPRAWFSRIEAH 103

Query: 397 LIKNGYKKVDSGSNLFYK*ENGEI 326
            +  G+++  S   LF K   G++
Sbjct: 104 FVNEGFERCHSEQTLFVKTNKGDV 127



 Score = 37.0 bits (84), Expect(2) = 2e-18
 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
 Frame = -2

Query: 243 PIDLGFKFESKE---KANTDQYRSIVGSVIYLTNTRPNIQFVL 124
           PI +GFK    E   K +   ++ IVGS++YLT TRP + F++
Sbjct: 142 PIVIGFKVFKDENGIKVDATFFKKIVGSLMYLTTTRPYLMFII 184


>gb|AAY87192.1| reverse transcriptase [Cycas revoluta]
          Length = 148

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 43/102 (42%), Positives = 69/102 (67%), Gaps = 3/102 (2%)
 Frame = -1

Query: 622 KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEA---NNKIYRLKKA 452
           K+ T+K+++++A +  W I+ +DVK  FLNG ++EEV+M  P+ Y      N + +LKKA
Sbjct: 31  KLNTVKTVIALAAQKGWEIYQMDVKSAFLNGDLQEEVYMYQPEGYIKAGHENMVCKLKKA 90

Query: 451 IYGLRQAPRVWYTKLEELLIKNGYKKVDSGSNLFYK*ENGEI 326
           +YGL+QAPR WY KL+  L +NG+ + +S  +L+ K  +G I
Sbjct: 91  LYGLKQAPRAWYAKLDSYLTENGFHRCESDHSLYVKGNSGSI 132


>gb|AAV59370.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1332

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 42/85 (49%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
 Frame = -1

Query: 622  KMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEANN---KIYRLKKA 452
            ++ T++SL+++A +  W +HH+DVK  FLNG +EEEV+++ P  +E      K+YRL KA
Sbjct: 906  RIETVRSLLALAAQEGWQVHHMDVKSAFLNGDLEEEVYVSQPLGFEVTGEEAKVYRLHKA 965

Query: 451  IYGLRQAPRVWYTKLEELLIKNGYK 377
            +YGLRQAPR WY KL+  LIK G++
Sbjct: 966  LYGLRQAPRAWYAKLDATLIKMGFE 990



 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
 Frame = -2

Query: 216  SKEKANT----DQYRSIVGSVIYLTNTRPNIQFVLGYLARWVHNPNLDHLKVAKGVVQYL 49
            SKE  N+     QYRS++GS+ YL NTR ++ + +GYL+R++  P  DHL  AK +++Y+
Sbjct: 1095 SKESTNSLVDATQYRSLIGSLRYLANTRLDLAYAVGYLSRFMEKPATDHLAAAKHLLRYV 1154


>emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera]
          Length = 1236

 Score = 70.5 bits (171), Expect(2) = 4e-18
 Identities = 32/90 (35%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
 Frame = -1

Query: 625  VKMRTIKSLVSIANKMNWNIHHLDVKCTFLNGGIEEEVFMNSPKYYEAN---NKIYRLKK 455
            VKM TI+ ++ +    N ++  LDVK  FL+G +EE+++M  P+ +      N + +L+K
Sbjct: 847  VKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRK 906

Query: 454  AIYGLRQAPRVWYTKLEELLIKNGYKKVDS 365
            ++YGL+QAPR WY K +  + + G+K+ ++
Sbjct: 907  SLYGLKQAPRQWYKKFDNFMHRIGFKRCEA 936



 Score = 47.0 bits (110), Expect(2) = 4e-18
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
 Frame = -2

Query: 300  YVEK*IQDNKLSLAKHKKYPIDLGFKFESKEKANTDQ---------YRSIVGSVIY-LTN 151
            YV+K +    ++ AK    P+   FK   ++   T++         Y S +GS++Y +  
Sbjct: 974  YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYTMVC 1033

Query: 150  TRPNIQFVLGYLARWVHNPNLDHLKVAKGVVQYLKVIKSLSLQFKG 13
            TRP+I   +G ++R++  P   H +  K +++YLK      L F G
Sbjct: 1034 TRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTG 1079