BLASTX nr result
ID: Ephedra25_contig00020016
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00020016
(605 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu... 69 1e-09
ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852... 66 6e-09
emb|CBI29694.3| unnamed protein product [Vitis vinifera] 66 6e-09
emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera] 66 6e-09
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr... 62 9e-08
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts... 61 3e-07
ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm... 60 4e-07
ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [A... 57 3e-06
gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Th... 57 5e-06
>ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa]
gi|550312328|gb|ERP48419.1| hypothetical protein
POPTR_0022s00460g [Populus trichocarpa]
Length = 511
Score = 68.9 bits (167), Expect = 1e-09
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 21/222 (9%)
Frame = -3
Query: 603 QRREPGGRG-KGGLVNKDFQQSPQSLSLQAEHQNQTPYVHRDIRKSF------------- 466
QR E GR K L+NKD ++ QS +Q+E Q QT + +D R
Sbjct: 304 QRHESSGRVIKSILLNKDSRRI-QSSGVQSEPQMQTSNLEKDKRPPRPPHALVLKDANGT 362
Query: 465 --DEAATSDLHAVPIIAEKPDRSTKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGA 292
D+ +DLH P EK +R T+N+ RPDR +WT RR + ++E S +
Sbjct: 363 PDDKVVGNDLHGFP--NEKQERRTRNKDRPDRVVWTLRRSEGSYASDESLSS-------S 413
Query: 291 AHASSEVTESDEASVIDSSGITSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRV 112
A+ S T GF SS N G++K++ LR G+ +
Sbjct: 414 AYLS-----------------TQSGFDSS----------QVNHGDVKADTLNLRSGEVKA 446
Query: 111 QGSARI--TSGDNGIHRQILRR--PVGQKEVDGS-VNGSEAK 1
GS R +S DNG H+ RR P ++ DGS V G K
Sbjct: 447 LGSGRSNHSSLDNGSHKHSGRRGPPHPVRDADGSTVEGKSLK 488
>ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852735 [Vitis vinifera]
Length = 322
Score = 66.2 bits (160), Expect = 6e-09
Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Frame = -3
Query: 603 QRREPGGRG-KGGLVNKDFQQSPQSLSLQAEHQNQTPYVHRDIRK--------------- 472
QRRE GR + L+NKD +QS QS Q E Q+Q + ++ R
Sbjct: 99 QRREGSGRIIRSILLNKDARQS-QSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNG 157
Query: 471 -SFDEAATSDLHAVPIIAEKPDRSTKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQG 295
D+ +D+H+ ++EK D+ T+N+ RPDR +WT RR++G
Sbjct: 158 AQDDKVVGNDVHS--FVSEKQDKRTRNKDRPDRGVWTPLRRSDG---------------- 199
Query: 294 AAHASSEVTESDEASVIDSSGITSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSR 115
+HA SDE+ +S TS F + GEM+S+ + R G+ +
Sbjct: 200 -SHA------SDESLSSSASQPTSSDFPE------------GSHGEMRSDMSNARSGEVK 240
Query: 114 VQGSAR--ITSGDNGIHRQILRR--PVGQKEVDGSVNGSEAK 1
GS R ++ DNG H+ RR K+ DGS SE K
Sbjct: 241 ALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGK 282
>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 66.2 bits (160), Expect = 6e-09
Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Frame = -3
Query: 603 QRREPGGRG-KGGLVNKDFQQSPQSLSLQAEHQNQTPYVHRDIRK--------------- 472
QRRE GR + L+NKD +QS QS Q E Q+Q + ++ R
Sbjct: 310 QRREGSGRIIRSILLNKDARQS-QSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNG 368
Query: 471 -SFDEAATSDLHAVPIIAEKPDRSTKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQG 295
D+ +D+H+ ++EK D+ T+N+ RPDR +WT RR++G
Sbjct: 369 AQDDKVVGNDVHS--FVSEKQDKRTRNKDRPDRGVWTPLRRSDG---------------- 410
Query: 294 AAHASSEVTESDEASVIDSSGITSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSR 115
+HA SDE+ +S TS F + GEM+S+ + R G+ +
Sbjct: 411 -SHA------SDESLSSSASQPTSSDFPE------------GSHGEMRSDMSNARSGEVK 451
Query: 114 VQGSAR--ITSGDNGIHRQILRR--PVGQKEVDGSVNGSEAK 1
GS R ++ DNG H+ RR K+ DGS SE K
Sbjct: 452 ALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGK 493
>emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera]
Length = 304
Score = 66.2 bits (160), Expect = 6e-09
Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Frame = -3
Query: 603 QRREPGGRG-KGGLVNKDFQQSPQSLSLQAEHQNQTPYVHRDIRK--------------- 472
QRRE GR + L+NKD +QS QS Q E Q+Q + ++ R
Sbjct: 55 QRREGSGRIIRSILLNKDARQS-QSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNG 113
Query: 471 -SFDEAATSDLHAVPIIAEKPDRSTKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQG 295
D+ +D+H+ ++EK D+ T+N+ RPDR +WT RR++G
Sbjct: 114 AQDDKVVGNDVHS--FVSEKQDKRTRNKDRPDRGVWTPLRRSDG---------------- 155
Query: 294 AAHASSEVTESDEASVIDSSGITSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSR 115
+HA SDE+ +S TS F + GEM+S+ + R G+ +
Sbjct: 156 -SHA------SDESLSSSASQPTSSDFPE------------GSHGEMRSDMSNARSGEVK 196
Query: 114 VQGSAR--ITSGDNGIHRQILRR--PVGQKEVDGSVNGSEAK 1
GS R ++ DNG H+ RR K+ DGS SE K
Sbjct: 197 ALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGK 238
>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
gi|557533707|gb|ESR44825.1| hypothetical protein
CICLE_v10000901mg [Citrus clementina]
Length = 514
Score = 62.4 bits (150), Expect = 9e-08
Identities = 65/218 (29%), Positives = 91/218 (41%), Gaps = 17/218 (7%)
Frame = -3
Query: 603 QRREPGGRG-KGGLVNKDFQQSPQSLSLQAEHQ-------------NQTPYVHRDIRK-S 469
QRRE GR +G L+NKD +Q+ Q+ L +E Q + V +D S
Sbjct: 311 QRRENSGRIIRGILLNKDARQN-QASGLHSEQQISNLEKDKRPPRPSHVQLVMKDTNGVS 369
Query: 468 FDEAATSDLHAVPIIAEKPDRSTKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGAA 289
D+ +DLH+ EK +R T+N+ RPDR WT RR + ++E S S +A
Sbjct: 370 DDKVIVNDLHS-----EKQERRTRNKDRPDRAAWTLRRSDGSYQSDESLSSSASQLSLSA 424
Query: 288 HASSEVTESDEASVIDSSGITSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRVQ 109
SSE N G+ K + + +R G+ +
Sbjct: 425 VDSSE----------------------------------GNLGDGKFDLSNMRSGEVKAV 450
Query: 108 GSARI--TSGDNGIHRQILRRPVGQKEVDGSVNGSEAK 1
G R +S DNG HR I RR + DGS SE K
Sbjct: 451 GGGRSSHSSVDNGSHRHIGRRGPTHVKDDGSPVMSEGK 488
>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
sinensis]
Length = 514
Score = 60.8 bits (146), Expect = 3e-07
Identities = 64/218 (29%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Frame = -3
Query: 603 QRREPGGRG-KGGLVNKDFQQSPQSLSLQAEHQ----------NQTPYVHRDIRK----S 469
QRRE GR +G L+NKD +Q+ Q+ L +E Q + +VH ++ S
Sbjct: 311 QRRENSGRIIRGILLNKDARQN-QASGLHSEQQISNLEKDKRPPRPSHVHLVMKDTNGVS 369
Query: 468 FDEAATSDLHAVPIIAEKPDRSTKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGAA 289
D+ +DLH+ EK +R T+N+ RPDR WT RR + ++E S S +A
Sbjct: 370 DDKVIVNDLHS-----EKQERRTRNKDRPDRAAWTLRRSDGSYQSDESLSSSASQLSLSA 424
Query: 288 HASSEVTESDEASVIDSSGITSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRVQ 109
SSE N G+ K + + +R G+ +
Sbjct: 425 VDSSE----------------------------------GNLGDGKFDLSNMRSGEVKAV 450
Query: 108 GSARI--TSGDNGIHRQILRRPVGQKEVDGSVNGSEAK 1
G R +S DNG HR I RR + D S SE K
Sbjct: 451 GGGRSSHSSVDNGSHRHIGRRGPTHVKDDSSPVMSEGK 488
>ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis]
gi|223534215|gb|EEF35930.1| conserved hypothetical
protein [Ricinus communis]
Length = 472
Score = 60.5 bits (145), Expect = 4e-07
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Frame = -3
Query: 603 QRREPGGRG-KGGLVNKDFQQSPQSLSLQAEHQNQTPYVHRDIR---------------- 475
QRRE GR + L+NKD +Q+ QS Q+E Q Q+ + ++ R
Sbjct: 262 QRRESSGRIIRSILLNKDSRQN-QSSGFQSEQQIQSSNLEKEKRLPRPAHVQLVLKDVNG 320
Query: 474 KSFDEAATSDLHAVPIIAEKPDRSTKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQG 295
S D+ +DLH EK ++ T+N+ RPDR +WT RR++G
Sbjct: 321 SSDDKFVGNDLHGFS--GEKQEKRTRNKDRPDRVVWTPLRRSDG---------------- 362
Query: 294 AAHASSEVTESDEASVIDSSGITSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSR 115
++A SDE+ +S T G SS N G++K + + R GD +
Sbjct: 363 -SYA------SDESLSSSASQSTHTGQDSS----------QGNLGDIKVDSSNSRSGDVK 405
Query: 114 VQGSARI--TSGDNGIHRQILRRPVGQ--KEVDGS 22
GS R +S DNG H+ RR ++ DGS
Sbjct: 406 TLGSGRSSHSSLDNGSHKHFGRRGPSHTVRDADGS 440
>ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [Amborella trichopoda]
gi|548862693|gb|ERN20051.1| hypothetical protein
AMTR_s00071p00188270 [Amborella trichopoda]
Length = 599
Score = 57.4 bits (137), Expect = 3e-06
Identities = 66/254 (25%), Positives = 104/254 (40%), Gaps = 53/254 (20%)
Frame = -3
Query: 603 QRREPGGRG-KGGLVNKDFQQSPQSLSLQAEHQNQTPYVHRDIR---------------- 475
QRR+ R K L NKD +Q P + Q E Q Q + +D R
Sbjct: 323 QRRDGNSRMVKSILSNKDGRQVPAHVLTQTEQQLQGLSLEKDKRPPRPNSTRLASKDHLS 382
Query: 474 --------------KSFDEAAT-SDLHAVPIIAEKPDRSTKNRGRPDRPMWTARRRANGF 340
K+ D+ T +D + + EK ++ T+N+ RPDR +WT RR++G
Sbjct: 383 GYLMPTSMSDSDPKKALDQKITGNDSYGLVPANEKQEKRTRNKDRPDRAVWTPLRRSDGI 442
Query: 339 GNEEGFQSIISGTQGAAHASSEVTESDEASVIDSSGITSPGFTSSGRINRNFLDTY---- 172
+ Q + ++A E+ D+ D G+ S +S G+ + L +
Sbjct: 443 HTVDESQMTSDSLEKLSNA-QELKLGDDTEECD--GLGSNASSSMGKSRTSDLGYHNSRS 499
Query: 171 ------------ANQGEMKSE-KALLRMGDSRVQGSAR--ITSGDNGIHRQILRR--PVG 43
NQG+ K + + R + + QG+ R S +NG HR RR G
Sbjct: 500 GRGASSSSSEHSLNQGDTKFDTSSASRSLEMKTQGTGRSSTVSVENGSHRHAGRRSSSTG 559
Query: 42 QKEVDGSVNGSEAK 1
K+ DGS+N + K
Sbjct: 560 LKDADGSMNLPDGK 573
>gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
Length = 514
Score = 56.6 bits (135), Expect = 5e-06
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 16/190 (8%)
Frame = -3
Query: 597 REPGGRGKGGLVNKDFQQSPQSLSLQAEHQNQTPYVHRDIRK----------------SF 466
R G +G L+NKD +Q+ QS +Q+E Q +T + +D R S
Sbjct: 315 RREGRMIRGILLNKDARQN-QSSGVQSEQQIRTSNLEKDRRPPRHSHSHLVLKDTNTASD 373
Query: 465 DEAATSDLHAVPIIAEKPDRSTKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGAAH 286
D+ +DLH +EKP+R +N+ RPDR +WT RR + ++E S S +Q A
Sbjct: 374 DKVVGNDLHG----SEKPERRCRNKDRPDRGVWTLRRSDGSYASDESMSS--SASQSALI 427
Query: 285 ASSEVTESDEASVIDSSGITSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRVQG 106
+ + + +D S + S + G + LD ++ + A+ G
Sbjct: 428 PLDPLEGTYGDTKVDLSNVRSVQVKTVGSGRNSSLDNGSHNKHVSRRGAV-------ADG 480
Query: 105 SARITSGDNG 76
S+ ++ G G
Sbjct: 481 SSVMSDGKPG 490