BLASTX nr result
ID: Ephedra25_contig00020003
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra25_contig00020003 (1122 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EOY18506.1| Regulator of nonsense transcripts 2 isoform 3 [Th... 60 2e-06 gb|EOY18504.1| Regulator of nonsense transcripts 2 isoform 1 [Th... 60 2e-06 ref|XP_004237528.1| PREDICTED: regulator of nonsense transcripts... 59 5e-06 gb|ABP01543.1| UPF2, partial [Nicotiana attenuata] 58 6e-06 ref|XP_006340545.1| PREDICTED: regulator of nonsense transcripts... 58 8e-06 gb|ESW10518.1| hypothetical protein PHAVU_009G216500g [Phaseolus... 58 8e-06 >gb|EOY18506.1| Regulator of nonsense transcripts 2 isoform 3 [Theobroma cacao] gi|508726610|gb|EOY18507.1| Regulator of nonsense transcripts 2 isoform 3 [Theobroma cacao] Length = 1046 Score = 60.1 bits (144), Expect = 2e-06 Identities = 28/53 (52%), Positives = 39/53 (73%) Frame = +3 Query: 918 LGKSLDIQSPVMLKDSNTKRVTSTEEGSQANAAKDASTPEFLWDDDVTKFFYE 1076 L ++LD+QSPVM +DS+T RVT+ E+ S K++ST E +WDDD T+ FYE Sbjct: 165 LAEALDMQSPVMPEDSHTTRVTTGEDASSPATGKESSTLEAIWDDDDTRAFYE 217 >gb|EOY18504.1| Regulator of nonsense transcripts 2 isoform 1 [Theobroma cacao] gi|508726608|gb|EOY18505.1| Regulator of nonsense transcripts 2 isoform 1 [Theobroma cacao] Length = 1193 Score = 60.1 bits (144), Expect = 2e-06 Identities = 28/53 (52%), Positives = 39/53 (73%) Frame = +3 Query: 918 LGKSLDIQSPVMLKDSNTKRVTSTEEGSQANAAKDASTPEFLWDDDVTKFFYE 1076 L ++LD+QSPVM +DS+T RVT+ E+ S K++ST E +WDDD T+ FYE Sbjct: 312 LAEALDMQSPVMPEDSHTTRVTTGEDASSPATGKESSTLEAIWDDDDTRAFYE 364 >ref|XP_004237528.1| PREDICTED: regulator of nonsense transcripts 2-like [Solanum lycopersicum] Length = 1188 Score = 58.5 bits (140), Expect = 5e-06 Identities = 27/53 (50%), Positives = 38/53 (71%) Frame = +3 Query: 918 LGKSLDIQSPVMLKDSNTKRVTSTEEGSQANAAKDASTPEFLWDDDVTKFFYE 1076 L ++LD+Q PVM +D +T RVTS E+ S +KD+S+ E LWDD+ T+ FYE Sbjct: 312 LAEALDLQPPVMPEDGHTTRVTSGEDASSPGGSKDSSSLEALWDDEDTRAFYE 364 >gb|ABP01543.1| UPF2, partial [Nicotiana attenuata] Length = 369 Score = 58.2 bits (139), Expect = 6e-06 Identities = 27/53 (50%), Positives = 38/53 (71%) Frame = +3 Query: 918 LGKSLDIQSPVMLKDSNTKRVTSTEEGSQANAAKDASTPEFLWDDDVTKFFYE 1076 L ++LD+Q PVM +D +T RVTS ++ S A+KD+S E LWDD+ T+ FYE Sbjct: 191 LAEALDMQPPVMPEDGHTTRVTSGDDASSPGASKDSSVLEALWDDEDTRAFYE 243 >ref|XP_006340545.1| PREDICTED: regulator of nonsense transcripts UPF2-like isoform X1 [Solanum tuberosum] gi|565347048|ref|XP_006340546.1| PREDICTED: regulator of nonsense transcripts UPF2-like isoform X2 [Solanum tuberosum] gi|565347050|ref|XP_006340547.1| PREDICTED: regulator of nonsense transcripts UPF2-like isoform X3 [Solanum tuberosum] Length = 1197 Score = 57.8 bits (138), Expect = 8e-06 Identities = 27/53 (50%), Positives = 37/53 (69%) Frame = +3 Query: 918 LGKSLDIQSPVMLKDSNTKRVTSTEEGSQANAAKDASTPEFLWDDDVTKFFYE 1076 L ++LD+Q PVM +D +T RVTS E+ S +KD+S E LWDD+ T+ FYE Sbjct: 312 LAEALDMQPPVMPEDGHTTRVTSGEDASSPGGSKDSSVLEALWDDEDTRAFYE 364 >gb|ESW10518.1| hypothetical protein PHAVU_009G216500g [Phaseolus vulgaris] Length = 1195 Score = 57.8 bits (138), Expect = 8e-06 Identities = 27/53 (50%), Positives = 38/53 (71%) Frame = +3 Query: 918 LGKSLDIQSPVMLKDSNTKRVTSTEEGSQANAAKDASTPEFLWDDDVTKFFYE 1076 L ++LD+Q PVM +D +T RVTS EEG + + KD+S E +WDD+ T+ FYE Sbjct: 306 LAEALDMQPPVMPEDGHTTRVTSGEEGISSASGKDSSVVEPIWDDEDTRTFYE 358