BLASTX nr result
ID: Ephedra25_contig00019295
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00019295
(1777 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth... 342 2e-91
gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus... 322 4e-85
ref|XP_004984444.1| PREDICTED: putative tRNA pseudouridine synth... 320 1e-84
ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synth... 316 2e-83
ref|XP_002467892.1| hypothetical protein SORBIDRAFT_01g035980 [S... 315 4e-83
ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synth... 313 2e-82
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth... 312 3e-82
ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Popu... 311 6e-82
gb|EAZ26854.1| hypothetical protein OsJ_10771 [Oryza sativa Japo... 311 6e-82
ref|NP_001050056.1| Os03g0338600 [Oryza sativa Japonica Group] g... 311 6e-82
gb|EOY34659.1| Pseudouridine synthase family protein [Theobroma ... 310 1e-81
gb|ESW14066.1| hypothetical protein PHAVU_008G250200g [Phaseolus... 310 2e-81
gb|AER92594.1| putative pseudouridine synthase family protein [L... 309 2e-81
ref|XP_006651355.1| PREDICTED: putative tRNA pseudouridine synth... 309 3e-81
ref|XP_003561660.1| PREDICTED: putative tRNA pseudouridine synth... 309 3e-81
gb|ACF83058.1| unknown [Zea mays] gi|414866704|tpg|DAA45261.1| T... 309 3e-81
ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synth... 308 4e-81
gb|EPS72857.1| hypothetical protein M569_01902, partial [Genlise... 308 6e-81
ref|XP_004145230.1| PREDICTED: putative tRNA pseudouridine synth... 308 6e-81
gb|EMJ08575.1| hypothetical protein PRUPE_ppa004352mg [Prunus pe... 306 2e-80
>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Solanum
lycopersicum]
Length = 496
Score = 342 bits (878), Expect = 2e-91
Identities = 196/469 (41%), Positives = 269/469 (57%), Gaps = 27/469 (5%)
Frame = -1
Query: 1402 SKRWKPDFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNL 1265
S +W+P K+KV M VGY+G IEGELE AIFKAGG+ ++N NL
Sbjct: 37 SNKWEPFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRESNFGNL 96
Query: 1264 DKAVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY------------NIRVFSVL 1121
K W+RS+RTDKGVHSLAT+I++K+EIP DA NIRVFS+L
Sbjct: 97 YKIGWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGITLANCVNSSLPENIRVFSIL 156
Query: 1120 PISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNY 941
P + F A+++C +RKY+YL+PAE+IGI +S EIE IA F DIL+SFEG HPFHNY
Sbjct: 157 PSKKRFDARRECNARKYSYLIPAEIIGIKNDSASSEIEYHIANFNDILNSFEGEHPFHNY 216
Query: 940 TVRAQNRKSKLNTLFSRLKSHAAEASHDETSKIKDDDELVEIDETREPG-IRVLEDDAID 764
T+R++ RK + S + +I +E+ +E G + ++E + +
Sbjct: 217 TIRSKYRKQSPARNLLKNDSLLKKGRPSSEEEISGSEEIDGEQNRKEQGVVTIVEAENQN 276
Query: 763 EDYXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEPDMHDKLSSAHFRRILSFTCSDLQ 584
+ + N P+QARWLHEPD DKLSSAHFRRI C L+
Sbjct: 277 AEGNCNLKVSHSKDL--------NSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLE 328
Query: 583 SIKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVL 404
+ Y+E+ + GESFM HQIRKM+GT+VA+ R +LP D +++SL +FSRIVL
Sbjct: 329 KLLGMNYVEVSI------CGESFMLHQIRKMVGTAVAIKRNLLPHDTLRMSLCKFSRIVL 382
Query: 403 PVAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKLTNLGQCVKIDARVNHFYFNTLL 224
P+AP+EVL+L + F+ + P R ++ L + I V+ FY++TLL
Sbjct: 383 PLAPSEVLVLKGNNFALRNHPGNIIR---------PEMLTLLESDDILKAVDDFYYSTLL 433
Query: 223 PALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWDFWYAKHLAR 77
P L FLDPS+ WS W+E LD +PD +L EVR AW W A++ +R
Sbjct: 434 PQLSRFLDPSKSPWSEWVEILDANTSIPDYQLEEVRVAWKLWKAQYDSR 482
>gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus vulgaris]
Length = 507
Score = 322 bits (824), Expect = 4e-85
Identities = 186/459 (40%), Positives = 263/459 (57%), Gaps = 26/459 (5%)
Frame = -1
Query: 1402 SKRWKPDFKRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNL 1265
S+ W+P K+KV M V Y+G IE ELE+A+FKAGG+ ++N +L
Sbjct: 51 SQSWQPSRKKKVVMRVAYVGTNYRGLQMQHDEHFLSTIEKELETAVFKAGGIRESNFGDL 110
Query: 1264 DKAVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY------------NIRVFSVL 1121
K W+RS+RTDKGVHSLATI++ K+EIP +A + +I+V S+L
Sbjct: 111 QKIKWARSSRTDKGVHSLATIVSFKMEIPENAWNGDPYGFGLANYVNSYLPFDIKVLSIL 170
Query: 1120 PISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNY 941
P + F +K+C RKY+YLLPAE+IGI +S +EI+ I++F DIL+ FEG HPFHNY
Sbjct: 171 PSQRSFDPRKECAWRKYSYLLPAEIIGIQSDSSNDEIDYHISEFHDILNVFEGEHPFHNY 230
Query: 940 TVRAQNRKSKLNTLFSRLKSHAAEASHDETSKIKDDDELVEIDETREPGIRVLEDDAIDE 761
T RA+ RK N S KS ++ + D++E EIDE I E
Sbjct: 231 TARAKYRKHFPNKQLSS-KSVERLPPYESECEYSDEEENFEIDEAFTENIE-CRSQKCSE 288
Query: 760 DYXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEPDMHDKLSSAHFRRILSFTCSDLQS 581
+ + ++ +ARWL+EPD D+LS++HFR++ +C L++
Sbjct: 289 THNFGKPVVGSSNKNGNRLPGQDSRLVARARWLYEPDEADRLSASHFRKVFQCSCGKLET 348
Query: 580 IKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLP 401
YIE+ + GESFM HQIRKM+GT+VAV R VLP DIIKLSL+RFSRI+LP
Sbjct: 349 SLGYNYIEISI------QGESFMLHQIRKMVGTAVAVKRKVLPKDIIKLSLARFSRIILP 402
Query: 400 VAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKLTNLGQCVKIDARVNHFYFNTLLP 221
+AP+EVLIL ++FS P R ++ + + +I+ V+ FY + +LP
Sbjct: 403 LAPSEVLILRGNRFSIRTRPGNVTR---------PEMQAMVESEEINKAVDGFYTSVMLP 453
Query: 220 ALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWD 104
+ FLDPS W W+E LD +P+D+L+EVRKAW+
Sbjct: 454 QVSKFLDPSGSPWEEWIEKLDAYTSIPNDQLDEVRKAWN 492
>ref|XP_004984444.1| PREDICTED: putative tRNA pseudouridine synthase-like [Setaria
italica]
Length = 519
Score = 320 bits (820), Expect = 1e-84
Identities = 190/486 (39%), Positives = 271/486 (55%), Gaps = 36/486 (7%)
Frame = -1
Query: 1435 PMDWKAERIDHSKRWKPDFKRKVAMMVGYIGHR--------------AIEGELESAIFKA 1298
P D A RW+ K++V + VGY+G IE LESAIFKA
Sbjct: 56 PSDTSAGDGGCGMRWESARKKRVVLRVGYVGTEYRGLQKQRELSVDSTIESVLESAIFKA 115
Query: 1297 GGMLDTNSDNLDKAVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY--------- 1145
GG+L++N L K W RS+RTDKGVHSLAT+I++K+EIP A
Sbjct: 116 GGILESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGISLASFINSN 175
Query: 1144 ---NIRVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILS 974
N+RVFS+LP + F +++C+ R+Y YLLPAE IGI + EE++ +++F IL
Sbjct: 176 LPNNVRVFSILPAQRSFDVRRECLYREYFYLLPAETIGIKDGCSSEEVQEHLSEFNSILK 235
Query: 973 SFEGRHPFHNYTVRAQNRK------SKLNTLFSRLKSHAAEASHDETSK----IKDDDEL 824
FEG HPFHNYT RA+ RK ++ LKS ++E +E S D DE
Sbjct: 236 GFEGNHPFHNYTARAKYRKVLAGSHRRVKGACLPLKSMSSETGMEENSSEDNTPSDHDED 295
Query: 823 VEIDETREPGIRVLEDDAIDEDYXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEPDMH 644
+ I + G+ ED+ +++ + G++ +QARWL+EPD
Sbjct: 296 LNISSMIDSGV---EDNCLND--------------VAKHFGNQ---VQIQARWLYEPDES 335
Query: 643 DKLSSAHFRRILSFTCSDLQSIKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIR 464
D+L+++HFR I++ +C +LQS +++EL + G SFM HQIRKM+GT+VAV R
Sbjct: 336 DRLNASHFRDIITCSCGELQSSSGIQFVELTI------CGVSFMLHQIRKMVGTAVAVKR 389
Query: 463 GVLPPDIIKLSLSRFSRIVLPVAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKLTN 284
G+LP DII+LSL++FSRIVLP+AP+EVLIL + F + R R + +
Sbjct: 390 GLLPKDIIELSLAKFSRIVLPIAPSEVLILRDNSFCTKNKEGRLVRPG---------IES 440
Query: 283 LGQCVKIDARVNHFYFNTLLPALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWD 104
+ + ++ V FY LLP L FLDPS P W W+ENLD+ +PD +L+EVR+A+
Sbjct: 441 MNKSAEVRKGVTEFYKAALLPELAKFLDPSMPPWKEWVENLDQFATIPDSQLDEVREAYK 500
Query: 103 FWYAKH 86
W A +
Sbjct: 501 IWKADY 506
>ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
[Glycine max] gi|571441413|ref|XP_006575436.1| PREDICTED:
putative tRNA pseudouridine synthase-like isoform X2
[Glycine max] gi|571441415|ref|XP_006575437.1| PREDICTED:
putative tRNA pseudouridine synthase-like isoform X3
[Glycine max] gi|571441417|ref|XP_006575438.1| PREDICTED:
putative tRNA pseudouridine synthase-like isoform X4
[Glycine max]
Length = 493
Score = 316 bits (809), Expect = 2e-83
Identities = 184/463 (39%), Positives = 264/463 (57%), Gaps = 28/463 (6%)
Frame = -1
Query: 1393 WKPDFKRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKA 1256
W+P K+KVAM+V Y+G IE ELE+AIFKAGG+ ++N +L K
Sbjct: 39 WQPSRKKKVAMLVAYVGTNYRGLQMQHDEHSLSTIEKELETAIFKAGGIRESNFGDLQKI 98
Query: 1255 VWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY------------NIRVFSVLPIS 1112
W+RS+RTDKGVHSLATII+ K+EIP +A + +I+V S+LP
Sbjct: 99 GWARSSRTDKGVHSLATIISFKMEIPENAWNGDPYGFGLANYVNSYLPFDIKVISILPSQ 158
Query: 1111 QGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVR 932
+ F +K+CI RKY+YLLPAE+IGI ++ +E++ I++F DIL+ FEG HPFHNYT R
Sbjct: 159 RSFDPRKECILRKYSYLLPAEIIGI-QSHFSDEVDYHISEFNDILNVFEGIHPFHNYTAR 217
Query: 931 AQNRKSKLNTLFSRLKSHAAEAS--HDETSKIKDDDELVEIDETREPGIRVLEDDAIDED 758
++ RK N S +A S ++ + D +E E DE I V + E
Sbjct: 218 SKYRKQFPNRQSSSKSGTSARESLSYESECEYSDGEENSETDEAYTENI-VCQSQKFSET 276
Query: 757 YXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEPDMHDKLSSAHFRRILSFTCSDLQSI 578
+ + ++ +ARWL+EPD D+LS++HFR++ +C L++
Sbjct: 277 HHFAEPVVGSSNKNGNGLHDQDSRLVARARWLYEPDEADRLSASHFRKVFQCSCGKLETS 336
Query: 577 KNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPV 398
YIE+ + GESFM HQIRKM+GT+VAV R LP DIIKLSL+RFSRI+LP+
Sbjct: 337 LGYNYIEISIQ------GESFMLHQIRKMVGTAVAVKRKALPKDIIKLSLTRFSRIILPL 390
Query: 397 APTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKLTNLGQCVKIDARVNHFYFNTLLPA 218
AP+E LIL ++FS P R ++ + + +I V+ FY + +LP
Sbjct: 391 APSEALILRGNRFSIRTRPGNITR---------PEMQTIVKSEEIKKAVDDFYTSVMLPQ 441
Query: 217 LVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWDFWYAK 89
+ LDPS+ W W+E LD +P+D+L+EVRKAW+ + K
Sbjct: 442 VSKLLDPSRSPWDEWIEKLDAHTSIPNDQLDEVRKAWNLFKEK 484
>ref|XP_002467892.1| hypothetical protein SORBIDRAFT_01g035980 [Sorghum bicolor]
gi|241921746|gb|EER94890.1| hypothetical protein
SORBIDRAFT_01g035980 [Sorghum bicolor]
Length = 520
Score = 315 bits (807), Expect = 4e-83
Identities = 188/488 (38%), Positives = 264/488 (54%), Gaps = 32/488 (6%)
Frame = -1
Query: 1453 PYTCLPPMDWKAERIDHSKRWKPDFKRKVAMMVGYIGHR--------------AIEGELE 1316
P L P D A RW+ K++V + +GYIG IE LE
Sbjct: 51 PAPSLSPPDTSANDGGGGMRWESARKKRVVLRIGYIGTEYRGLQKQRELGVDSTIESVLE 110
Query: 1315 SAIFKAGGMLDTNSDNLDKAVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY--- 1145
SAIFK+GG+L++N L K W RS+RTDKGVHSLAT+I++K+EIP A
Sbjct: 111 SAIFKSGGILESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALA 170
Query: 1144 ---------NIRVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAK 992
N+RVFS+LP + F +++C+ R+Y YLLPAEVIGI + PEEI+ +++
Sbjct: 171 SFINSNLPDNVRVFSILPAQRSFDVRRECLYREYFYLLPAEVIGIKDGYSPEEIQEHLSE 230
Query: 991 FRDILSSFEGRHPFHNYTVRAQNRK------SKLNTLFSRLKSHAAEASHDETSKIKDDD 830
F IL FEG HPFHNYT RA+ RK + LKS ++E E+S +
Sbjct: 231 FNSILKGFEGNHPFHNYTARAKYRKVLAGRHPRAKGASLTLKSMSSEMGMAESSSL---- 286
Query: 829 ELVEIDETREPGIRVLEDDAIDEDYXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEPD 650
E D+ + I ++ A + + + +QARWLHEPD
Sbjct: 287 ESTSSDDDEDLNISSIDSGASENIFVNDILKFSESRV------------QIQARWLHEPD 334
Query: 649 MHDKLSSAHFRRILSFTCSDLQSIKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAV 470
D+L+++HFR I++ +C +LQ+ +++EL + G SFM HQIRKM+GT+VAV
Sbjct: 335 ESDRLNASHFRDIITCSCGELQTSSGIQFVELTIC------GVSFMLHQIRKMVGTAVAV 388
Query: 469 IRGVLPPDIIKLSLSRFSRIVLPVAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKL 290
RG+LP DII+LSL++FSRIVLP+AP+EVLIL + F R R +
Sbjct: 389 KRGLLPKDIIELSLAKFSRIVLPIAPSEVLILKDNSFCTKSKEGRIVRPG---------I 439
Query: 289 TNLGQCVKIDARVNHFYFNTLLPALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKA 110
++ + I V FY LLP + FLDP+ P W W+ENLD + D +L+EVR+A
Sbjct: 440 QSMNKSAAIRKGVEEFYKAALLPEVAKFLDPAVPPWKEWVENLDRFAGISDSQLDEVREA 499
Query: 109 WDFWYAKH 86
+ W A +
Sbjct: 500 YRAWKADY 507
>ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Fragaria vesca
subsp. vesca]
Length = 509
Score = 313 bits (802), Expect = 2e-82
Identities = 180/475 (37%), Positives = 266/475 (56%), Gaps = 32/475 (6%)
Frame = -1
Query: 1417 ERIDHSKRWKPDFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDT 1280
E + H++RW+ KRKV + VGY+G IE ELE+AIFKAGG+ ++
Sbjct: 46 ESLTHAERWESVRKRKVVLRVGYVGTDYRGLQIQRDDPSISTIEKELETAIFKAGGIRES 105
Query: 1279 NSDNLDKAVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY------------NIR 1136
N NL+K W+RS+RTDKGVHSLAT+I++K+EIP +A +I+
Sbjct: 106 NFGNLNKISWARSSRTDKGVHSLATMISLKMEIPENAWDGDPYGIALVNHINSYLPRDIK 165
Query: 1135 VFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRH 956
VFS +P + F +K+C R Y+YLLPA+VIGI + EIE+ IA F DIL++FEG H
Sbjct: 166 VFSAVPAQRSFDPRKECNLRMYSYLLPADVIGIKSHFSAAEIEDHIADFNDILNAFEGEH 225
Query: 955 PFHNYTVRAQNR------KSKLNTLFSRLKSHAAEASHDETSKIKDDDELVEIDETREPG 794
PFHNYT+R++ R KS + S+ + EAS E D+D+ + +
Sbjct: 226 PFHNYTIRSKYRMKLPGKKSPIYRNMSKTERSTVEASSSELEGSDDEDKFKGRNSSETEV 285
Query: 793 IRVLEDDAIDEDYXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEPDMHDKLSSAHFRR 614
+ + + + ++ ++ + A+WL+EPD D++ ++HFR+
Sbjct: 286 LNQNSSMSSNGNEILLHACKKQEDVLK----EKSTDSVVYAKWLYEPDESDRIGASHFRK 341
Query: 613 ILSFTCSDLQSIKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIRGVLPPDIIKL 434
I +C L+ Y+EL + GESFM HQIRKM+GT+VAV R +LP DI+ L
Sbjct: 342 IFRCSCGKLEKSLTHEYVELSIW------GESFMLHQIRKMVGTAVAVKRKLLPRDILTL 395
Query: 433 SLSRFSRIVLPVAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKLTNLGQCVKIDAR 254
SL++FSRI+LP+AP+EVLIL ++FS P +R A+ + ++ +
Sbjct: 396 SLAKFSRIILPLAPSEVLILRGNRFSIRERPGNVKRPEMIAMV---------ESEEVIKQ 446
Query: 253 VNHFYFNTLLPALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWDFWYAK 89
V+ F+ + +LP + FL+PS W W+ENLD +PD EL+EVR AW W K
Sbjct: 447 VDEFFTSVMLPQVAKFLEPSGYPWQEWIENLDRNTGIPDRELDEVRNAWKVWKEK 501
>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis vinifera]
Length = 564
Score = 312 bits (799), Expect = 3e-82
Identities = 194/477 (40%), Positives = 269/477 (56%), Gaps = 43/477 (9%)
Frame = -1
Query: 1399 KRWKPDFKRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLD 1262
++W+ K+KV M VGY+G IEGELE+A+FKAGG+ D+N NL
Sbjct: 55 QKWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLH 114
Query: 1261 KAVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY------------NIRVFSVLP 1118
K W RS+RTDKGVHSLAT+I++K+EIP +A NI+VFS+LP
Sbjct: 115 KIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILP 174
Query: 1117 ISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYT 938
+ F A+++C R+Y+YLLPAE+IGI NS EI++ IA+F DIL++FEG HPF NYT
Sbjct: 175 SQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYT 234
Query: 937 VRAQNRKS-------KLNTLFSRLKSHAAEASHDETSKIKDDDELVEIDETREPGIRVLE 779
+R++ RK +F R KS + EAS E ++ D +E GI +
Sbjct: 235 IRSKYRKQFPAKQSPGNGGVFRRAKS-SGEASTSE-FEVSDGEE--------NSGINGVI 284
Query: 778 DDAIDEDYXXXXXXXXXXGIIPTTVGSEN--------IAPPL--QARWLHEPDMHDKLSS 629
D D + VGS N +P L +ARWLH PD D++S+
Sbjct: 285 SS--DYDEGENQNSSESTSFVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISA 342
Query: 628 AHFRRILSFTCSDLQSIKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIRGVLPP 449
+HFR+I + +C L+ Y+EL + GESFM HQIRKM+GT++AV R +LP
Sbjct: 343 SHFRKIFNCSCGKLEKFLGLDYVELSI------CGESFMLHQIRKMVGTAIAVKRELLPR 396
Query: 448 DIIKLSLSRFSRIVLPVAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKLTNLGQCV 269
DI+ LSL++FSRIVLP+AP+EVLIL + FS P +R ++ L +
Sbjct: 397 DILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKR---------PEMLTLMESE 447
Query: 268 KIDARVNHFYFNTLLPALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWDFW 98
+I V+ FY + +LP + FLDPS+ W WLENL +P+ EL++VR AW W
Sbjct: 448 EILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENL-TLSSIPEAELDDVRTAWKLW 503
>ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Populus trichocarpa]
gi|550325882|gb|EEE95884.2| hypothetical protein
POPTR_0013s15030g [Populus trichocarpa]
Length = 505
Score = 311 bits (797), Expect = 6e-82
Identities = 192/493 (38%), Positives = 275/493 (55%), Gaps = 30/493 (6%)
Frame = -1
Query: 1462 AENPYTCLPPM-DWKAERIDHSKRWKPDFKRKVAMMVGYIGHR--------------AIE 1328
+++P + PP+ D + + HSK W+ K+KVA+ VGY+G IE
Sbjct: 47 SQSPPSISPPLTDSNSNQSLHSK-WESIRKKKVALRVGYVGTDYRGLQKQHDQHSLLTIE 105
Query: 1327 GELESAIFKAGGMLDTNSDNLDKAVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXX 1148
GELE AI++AGG+ ++N NL+K W+RS+RTDKGVHSLAT I MK+EIP +A
Sbjct: 106 GELERAIYEAGGIRESNYGNLNKISWARSSRTDKGVHSLATTITMKMEIPENAWKDDLYG 165
Query: 1147 Y------------NIRVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIEN 1004
+IRV S+LP + F +++C RKY+YLLPAEVIGI + EI++
Sbjct: 166 MVLAKHVNSYLPDSIRVLSILPAQKSFDPRRECDIRKYSYLLPAEVIGIKSHFSMAEIDD 225
Query: 1003 CIAKFRDILSSFEGRHPFHNYTVRAQNRKSKLNTLFSRLKSHAAEASHDE--TSKIKDDD 830
I+ F +IL++FEG HPFHNYTVR++ R+ + H ++ + TS ++
Sbjct: 226 HISDFNNILNAFEGDHPFHNYTVRSKYRRK-----YPTKNGHVSKRARSSWGTSASGSEE 280
Query: 829 ELVEIDE-TREPGIRVLEDDAIDEDYXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEP 653
VE+ + + E I L D + + S N+ PL+ARWLHEP
Sbjct: 281 NHVELSQNSLESSICDLNGDILKDQ-------------------SSNL--PLRARWLHEP 319
Query: 652 DMHDKLSSAHFRRILSFTCSDLQSIKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVA 473
D D++ +AHFR+I +C L+ ++E+ + GESFM HQIRKM+GT+VA
Sbjct: 320 DETDRIGAAHFRKIFRCSCGKLEKSLGFDFVEISI------WGESFMLHQIRKMVGTAVA 373
Query: 472 VIRGVLPPDIIKLSLSRFSRIVLPVAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTK 293
V R VLP D+I LSL++FSRIVLP+AP+EVLIL + FS +R +
Sbjct: 374 VKRKVLPRDLIMLSLTKFSRIVLPLAPSEVLILRGNDFSLRKKSGEGKR---------PE 424
Query: 292 LTNLGQCVKIDARVNHFYFNTLLPALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRK 113
+ + + +I VN FY +LP + FLDP PLW W+ENLD+ +PD +L+EVR
Sbjct: 425 METMVESEEILRAVNEFYSTMMLPQVSKFLDPCMPLWKEWVENLDKYTSIPDAQLDEVRI 484
Query: 112 AWDFWYAKHLARR 74
A W R+
Sbjct: 485 ARKVWMENFKIRK 497
>gb|EAZ26854.1| hypothetical protein OsJ_10771 [Oryza sativa Japonica Group]
Length = 516
Score = 311 bits (797), Expect = 6e-82
Identities = 185/469 (39%), Positives = 257/469 (54%), Gaps = 32/469 (6%)
Frame = -1
Query: 1396 RWKPDFKRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDK 1259
RW+ K++V + VGY+G IE LE+AIFKAGG+L++N L K
Sbjct: 65 RWESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYGKLQK 124
Query: 1258 AVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY------------NIRVFSVLPI 1115
W RS+RTDKGVHSLAT+I++K+EIP A N+RVFSVLP
Sbjct: 125 VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDNVRVFSVLPA 184
Query: 1114 SQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTV 935
+ F +++C+ R+Y YLLPAE+IGI EE+ +++F IL FEG HPFHNYT
Sbjct: 185 QRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGNHPFHNYTA 244
Query: 934 RAQNRK------SKLNTLFSRLKSHAAEASHDETSKIKDDDELVEIDETREPGIRVLEDD 773
RA+ RK K+ S + S E S D++S DD + DE ++
Sbjct: 245 RAKYRKVLAGRHRKVKGASSAVNSMPTEMSLDQSS--SDDGTTSDHDEEDLNSSSIIGSS 302
Query: 772 AIDEDYXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEPDMHDKLSSAHFRRILSFTCS 593
++ Y SE ++ARWLHEPD +D+L+++HFR IL+F+C
Sbjct: 303 VPEDSYKDNPEF------------SEK-QVQIRARWLHEPDENDRLNASHFRDILTFSCG 349
Query: 592 DLQSIKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSR 413
+LQ +++EL + G SFM HQIRKM+GTSVAV RG+LP DII LSL++FSR
Sbjct: 350 ELQISSGIQFVELTI------SGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLAKFSR 403
Query: 412 IVLPVAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKLTNLGQCVKIDARVNHFYFN 233
IVLP+AP+EVL+L + F + R + ++ + ++ V FY
Sbjct: 404 IVLPIAPSEVLVLRDNSFCLRNKQGTIVRPG---------IQSMNESEEVKKGVMEFYRA 454
Query: 232 TLLPALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWDFWYAKH 86
L+P L +FLD S P W W+ENLD +PD +L EVR A+ W A +
Sbjct: 455 ALVPELANFLDASMPPWKEWVENLDRFTSIPDPQLEEVRSAYRVWKADY 503
>ref|NP_001050056.1| Os03g0338600 [Oryza sativa Japonica Group]
gi|108708043|gb|ABF95838.1| tRNA pseudouridine synthase
family protein, expressed [Oryza sativa Japonica Group]
gi|113548527|dbj|BAF11970.1| Os03g0338600 [Oryza sativa
Japonica Group]
Length = 516
Score = 311 bits (797), Expect = 6e-82
Identities = 185/469 (39%), Positives = 257/469 (54%), Gaps = 32/469 (6%)
Frame = -1
Query: 1396 RWKPDFKRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDK 1259
RW+ K++V + VGY+G IE LE+AIFKAGG+L++N L K
Sbjct: 65 RWESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYGKLQK 124
Query: 1258 AVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY------------NIRVFSVLPI 1115
W RS+RTDKGVHSLAT+I++K+EIP A N+RVFSVLP
Sbjct: 125 VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDNVRVFSVLPA 184
Query: 1114 SQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTV 935
+ F +++C+ R+Y YLLPAE+IGI EE+ +++F IL FEG HPFHNYT
Sbjct: 185 QRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGNHPFHNYTA 244
Query: 934 RAQNRK------SKLNTLFSRLKSHAAEASHDETSKIKDDDELVEIDETREPGIRVLEDD 773
RA+ RK K+ S + S E S D++S DD + DE ++
Sbjct: 245 RAKYRKVLAGRHRKVKGASSAVNSMPTEMSLDQSS--SDDGTTSDHDEEDLNSSSIIGSS 302
Query: 772 AIDEDYXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEPDMHDKLSSAHFRRILSFTCS 593
++ Y SE ++ARWLHEPD +D+L+++HFR IL+F+C
Sbjct: 303 VPEDSYKDNPEF------------SEK-QVQIRARWLHEPDENDRLNASHFRDILTFSCG 349
Query: 592 DLQSIKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSR 413
+LQ +++EL + G SFM HQIRKM+GTSVAV RG+LP DII LSL++FSR
Sbjct: 350 ELQISSGIQFVELTI------SGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLAKFSR 403
Query: 412 IVLPVAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKLTNLGQCVKIDARVNHFYFN 233
IVLP+AP+EVL+L + F + R + ++ + ++ V FY
Sbjct: 404 IVLPIAPSEVLVLRDNSFCLRNKQGTIVRPG---------IQSMNESEEVKKGVMEFYRA 454
Query: 232 TLLPALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWDFWYAKH 86
L+P L +FLD S P W W+ENLD +PD +L EVR A+ W A +
Sbjct: 455 ALVPELANFLDASMPPWKEWVENLDRFTSIPDPQLEEVRSAYRVWKADY 503
>gb|EOY34659.1| Pseudouridine synthase family protein [Theobroma cacao]
Length = 507
Score = 310 bits (795), Expect = 1e-81
Identities = 191/471 (40%), Positives = 260/471 (55%), Gaps = 31/471 (6%)
Frame = -1
Query: 1402 SKRWKPDFKRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNL 1265
S +W+P K+KV M VGY+G IE ELE+AIFKAGG+ D+N +L
Sbjct: 48 SPKWEPFRKKKVVMRVGYVGTNYRGLQVQRDEHQLSTIENELETAIFKAGGIRDSNYGDL 107
Query: 1264 DKAVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY------------NIRVFSVL 1121
K W+RS+RTDKGVHSLAT+I +K+EIP DA +I+VFS+L
Sbjct: 108 HKIAWARSSRTDKGVHSLATMITLKMEIPEDAWKEDPNGIALAKCVNSYLPDSIKVFSIL 167
Query: 1120 PISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNY 941
P + F +++C RKY+YLLPAE+IGI + EI + I+ F IL+ FEG HPFHNY
Sbjct: 168 PSQKSFDPRRECNLRKYSYLLPAEIIGIKSHFSEAEINHHISDFNSILNCFEGEHPFHNY 227
Query: 940 TVRAQNRKS--KLNTLFSRLKSHAAEASHDETSKIKDDDELVEIDETREPGIR---VLED 776
T RA+ R+ T + AEA HDE+S EL E D +P I L
Sbjct: 228 TQRAKYRRQIPPRQTARNGRVPKGAEA-HDESS----TSELEESDVEEDPRIEETTTLNS 282
Query: 775 DAIDEDYXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEPDMHDKLSSAHFRRILSFTC 596
+ + S N+ ++ARWL+EPD D+++++HFR+I +C
Sbjct: 283 EEKSTSFDEPRVDCCDGQGNSLQYQSSNVV--VRARWLYEPDETDRITASHFRKIFLCSC 340
Query: 595 SDLQSIKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFS 416
L++ YIE+ + GESFM HQIRKM+GT+VAV R + P DI+ LSL++FS
Sbjct: 341 GRLENSMGFDYIEISI------WGESFMLHQIRKMVGTAVAVKRNLFPRDILTLSLAKFS 394
Query: 415 RIVLPVAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKLTNLGQCVKIDARVNHFYF 236
RIVLP+AP+EVLIL + F P R ++ + + +I V+ FY
Sbjct: 395 RIVLPLAPSEVLILRGNTFILRKMPSNITR---------PEMLTMVESEEILKEVDKFYR 445
Query: 235 NTLLPALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWDFWYAKHL 83
+ LLP + FLDPS+ W W+ENLD +PD EL+EVR AW W K L
Sbjct: 446 SVLLPQVSKFLDPSKSPWKEWVENLDANTSVPDAELDEVRTAWKLWKEKLL 496
>gb|ESW14066.1| hypothetical protein PHAVU_008G250200g [Phaseolus vulgaris]
Length = 512
Score = 310 bits (793), Expect = 2e-81
Identities = 188/491 (38%), Positives = 264/491 (53%), Gaps = 39/491 (7%)
Frame = -1
Query: 1453 PYTCLPPMDWKA------ERIDHSKRWKPDFKRKVAMMVGYIGH--------------RA 1334
PY LPP + S +W+P K+KV M VGY+G
Sbjct: 38 PYLLLPPTVFNCFCSSTHSLPTPSNKWEPFLKKKVVMRVGYVGTDFRGLQIQRDEHTLST 97
Query: 1333 IEGELESAIFKAGGMLDTNSDNLDKAVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXX 1154
IE ELE+AIF AGGM D+N +L+K W RS+RTDKGVHSLAT+I+ K+EIP +A
Sbjct: 98 IEKELETAIFTAGGMRDSNFGDLNKVKWGRSSRTDKGVHSLATVISFKMEIPENAWKGDD 157
Query: 1153 XX------------YNIRVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEI 1010
Y IRVFS+LP ++ F +++C RKY+YLLPA++IGI + +EI
Sbjct: 158 YGIALANRINSYLPYTIRVFSILPSTKRFDPRRECNLRKYSYLLPADIIGIQSHFSKDEI 217
Query: 1009 ENCIAKFRDILSSFEGRHPFHNYTVRAQNRK-------SKLNTLFSRLKSHAAEASHDET 851
+ I++F IL+ FEG HPFHNYTVR++ RK S + + RL S + + +
Sbjct: 218 DFHISEFNSILNVFEGEHPFHNYTVRSKYRKKYQVRQSSGSDVMSDRLGSSSLASGFESE 277
Query: 850 SKIKDDDELVEIDETREPGIRVLEDDAIDEDYXXXXXXXXXXGIIPTTVGSENIAPPLQA 671
S DD + V+ T L D +E + + S+N ++A
Sbjct: 278 SDDSDDYDFVDGSPT------TLSDK--EESHKPPESSESNG------LSSQNSNVVVRA 323
Query: 670 RWLHEPDMHDKLSSAHFRRILSFTCSDLQSIKNQRYIELMVXXXXXXXGESFMYHQIRKM 491
RWLHEPD D+L+++HFR + +C L++ Y+E+ + G+SFM HQIRKM
Sbjct: 324 RWLHEPDEKDRLNASHFRNVFRCSCGKLETSMGYDYVEIHIW------GDSFMLHQIRKM 377
Query: 490 IGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPTEVLILHSSQFSFTHDPWRDERVSGFA 311
+GT+VAV R ++P D+I +SL++FSRIVLP+AP EVLIL + F + F
Sbjct: 378 VGTAVAVKRKLIPKDVISVSLNKFSRIVLPLAPPEVLILRGNAFKMR------SKAGNFT 431
Query: 310 LSGTTKLTNLGQCVKIDARVNHFYFNTLLPALVDFLDPSQPLWSVWLENLDEKCRLPDDE 131
+ Q +K V+ FY +LP + FLD S W W+ENL+ +PD E
Sbjct: 432 RQEMVSMVESEQILK---AVDEFYTCVVLPEVSKFLDSSNSPWEKWVENLENYSSIPDGE 488
Query: 130 LNEVRKAWDFW 98
L+EVRKAW W
Sbjct: 489 LDEVRKAWKTW 499
>gb|AER92594.1| putative pseudouridine synthase family protein [Linum usitatissimum]
Length = 565
Score = 309 bits (792), Expect = 2e-81
Identities = 184/479 (38%), Positives = 260/479 (54%), Gaps = 41/479 (8%)
Frame = -1
Query: 1396 RWKPDFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNLDK 1259
+W P K+KV + VGY+G +E ELE+AIFKAGG+L++N +L+K
Sbjct: 108 KWVPIRKKKVVLRVGYVGTDYRGLQKQHDEHSLSTVEAELENAIFKAGGILESNYGHLNK 167
Query: 1258 AVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY------------NIRVFSVLPI 1115
W+RS+RTDKGVHSLAT I MK+EIP A +IR+FS+LP
Sbjct: 168 VAWARSSRTDKGVHSLATTITMKMEIPETAWKDDPYGIALARTVNSYLPDSIRIFSILPA 227
Query: 1114 SQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTV 935
+ F + +C RKY+YLLPAE+IGI +S +EI I+ FR IL++FEG HPFHNYT+
Sbjct: 228 QKNFDPRLECNMRKYSYLLPAEIIGIRSHSDADEISEHISDFRKILNAFEGDHPFHNYTI 287
Query: 934 RAQNRKSKLNTLFSRLKSHAAEASHDETSKIKDDDELVEIDETREPGIRVLEDDAIDEDY 755
R++ R F H + K D ++I + G E++ +DE
Sbjct: 288 RSKYRSQIRRNTFPEKNYHFS----------KRDRAFIQIGDPVSEGSD--EEEGVDE-- 333
Query: 754 XXXXXXXXXXGIIPTTVGSENIAP--------PLQARWLHEPDMHDKLSSAHFRRILSFT 599
I+ ++NI P L ARWL EPD D++ ++HFR+I+ +
Sbjct: 334 -----------IVQLDNSNQNIEPVKDHQSSGQLVARWLXEPDERDRIGASHFRKIIRCS 382
Query: 598 CSDLQSIKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRF 419
C +L+ ++E+ + GESFM HQIRKM+GT+VAV R +LP DI+ LSL++F
Sbjct: 383 CGELEKSSGYNFVEISI------WGESFMLHQIRKMVGTAVAVKRDLLPRDILTLSLAKF 436
Query: 418 SRIVLPVAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKLTNLGQCVKIDARVNHFY 239
SRIVLP+AP+EVLIL + +S T R +++ + + +I V+ FY
Sbjct: 437 SRIVLPLAPSEVLILRGNSYSLTRKSREGTR---------SEVQTMSEAEEILKGVDEFY 487
Query: 238 FNTLLPALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWD-------FWYAKHL 83
+ LLP + FLDPS W W+E LDE +PD ELNE R A+ +WY L
Sbjct: 488 VDKLLPQVSKFLDPSSSPWLEWVEKLDEHTHIPDAELNEERPAFPLHPPRHWYWYITEL 546
>ref|XP_006651355.1| PREDICTED: putative tRNA pseudouridine synthase-like [Oryza
brachyantha]
Length = 518
Score = 309 bits (791), Expect = 3e-81
Identities = 183/483 (37%), Positives = 259/483 (53%), Gaps = 32/483 (6%)
Frame = -1
Query: 1438 PPMDWKAERIDHSKRWKPDFKRKVAMMVGYIGHR--------------AIEGELESAIFK 1301
PP+ ++ RW+ K++V + VGY+G IE LE+AIFK
Sbjct: 53 PPLTTCSDDGGRGIRWESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFK 112
Query: 1300 AGGMLDTNSDNLDKAVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY-------- 1145
GG+L++N L K W RS+RTDKGVHSLAT+I++K+EIP A
Sbjct: 113 TGGILESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGISLSNFINS 172
Query: 1144 ----NIRVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDIL 977
N+RVFS+LP + F +K+C+ R Y YL+PAE+IGI + +E+ +++F IL
Sbjct: 173 NLPDNVRVFSILPAQRSFDVRKECLYRDYLYLIPAEIIGIKDGCSSDEVVEHLSEFNYIL 232
Query: 976 SSFEGRHPFHNYTVRAQNRKSKLNTLFSRLKSHAAEASHDETSKI------KDDDELVEI 815
FEG HPFHNYT RA+ RK R A+ A + +SK+ DD +
Sbjct: 233 KGFEGNHPFHNYTARAKYRKVLAGR--HRKVKRASSAVNSMSSKMGMEGISSDDGTSSDH 290
Query: 814 DETREPGIRVLEDDAIDEDYXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEPDMHDKL 635
DE ++ A + Y I +ARWLHEPD +D+L
Sbjct: 291 DEEDLNSSSLIGSSAPENSYKDSPELSKKQVQI-------------RARWLHEPDENDRL 337
Query: 634 SSAHFRRILSFTCSDLQSIKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIRGVL 455
+++HFR IL+F+C +LQS +++EL + G SFM HQIRKM+GT+VAV RG+L
Sbjct: 338 NASHFRDILTFSCGELQSSSGMQFVELTIS------GVSFMLHQIRKMVGTAVAVKRGLL 391
Query: 454 PPDIIKLSLSRFSRIVLPVAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKLTNLGQ 275
P DII LSL++FSRIVLP+AP+EVLIL + F + R + ++ +
Sbjct: 392 PKDIIALSLAKFSRIVLPIAPSEVLILRDNSFCLKNKQGSIVRPG---------IQSMNE 442
Query: 274 CVKIDARVNHFYFNTLLPALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWDFWY 95
++ V FY LLP L +FLD S P W W+ENLD+ +PD +L E+R A+ W
Sbjct: 443 SEEVKKGVMEFYKAALLPELANFLDASMPPWKEWVENLDQFTSIPDSQLEEIRSAYRVWK 502
Query: 94 AKH 86
A +
Sbjct: 503 ADY 505
>ref|XP_003561660.1| PREDICTED: putative tRNA pseudouridine synthase-like [Brachypodium
distachyon]
Length = 522
Score = 309 bits (791), Expect = 3e-81
Identities = 185/499 (37%), Positives = 265/499 (53%), Gaps = 35/499 (7%)
Frame = -1
Query: 1489 CFDHKDRRNA---ENPYTCLPPMDWKAERIDHSKRWKPDFKRKVAMMVGYIGHR------ 1337
CF H A P PP+ + RW+ K++V + VGY+G
Sbjct: 36 CFSHSASAPALASSTPAPPAPPLTTCSGEGGGGLRWESTRKKRVVLRVGYVGSEYRGLQK 95
Query: 1336 --------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRSNRTDKGVHSLATIIAMKLEI 1181
IE LESAIFKAGG+L++N L K W RS+RTDKGVHSLAT+I++K+EI
Sbjct: 96 QRELSADSTIESVLESAIFKAGGILESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEI 155
Query: 1180 PRDAXXXXXXXY------------NIRVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGI 1037
P A NI+VFS+LP + F +++C+ R+Y YLLPAE+IGI
Sbjct: 156 PDRAWENDPDGIALANFINSNLPNNIKVFSILPAQRSFDVRRECLYREYFYLLPAEIIGI 215
Query: 1036 SENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAQNRK------SKLNTLFSRLKSHA 875
EE+E + +F IL FEG HPFHNYT RA+ RK + S + S
Sbjct: 216 KSGCSSEEVEEHLIEFNSILKGFEGNHPFHNYTARAKYRKVLAGAHRRSKETSSTINSIP 275
Query: 874 AEASHDETSKIKDDDELVEIDETREPGIRVLEDDAIDEDYXXXXXXXXXXGIIPTTVGSE 695
+E + D++ DD + D+ V++ + D+ +
Sbjct: 276 SELAVDQSP--NDDGATSDADDEHLNFSSVVDSSLPENDWNKDNPKHHENHV-------- 325
Query: 694 NIAPPLQARWLHEPDMHDKLSSAHFRRILSFTCSDLQSIKNQRYIELMVXXXXXXXGESF 515
+QARWLHEP+ +D+LS++HFR I++ +C +LQS +++EL + G SF
Sbjct: 326 ----QIQARWLHEPNENDRLSASHFRDIITCSCGELQSSSGIQFVELTI------CGVSF 375
Query: 514 MYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPTEVLILHSSQFSFTHDPWR 335
M HQIRKM+GT+VAV RG+LP +II+LSL++FSRIVLP+AP+EVLIL + F +
Sbjct: 376 MLHQIRKMVGTAVAVKRGLLPKEIIELSLAKFSRIVLPIAPSEVLILRDNSFCTRNKQGS 435
Query: 334 DERVSGFALSGTTKLTNLGQCVKIDARVNHFYFNTLLPALVDFLDPSQPLWSVWLENLDE 155
R + ++ + ++ V FY L+P L +LD S+P W W+ENLD
Sbjct: 436 IVRPG---------IQSINESKEVKKGVMEFYKAALVPELAKYLDASEPPWEEWVENLDH 486
Query: 154 KCRLPDDELNEVRKAWDFW 98
+PD +L+EVR A+ W
Sbjct: 487 FTSIPDSQLDEVRTAYTAW 505
>gb|ACF83058.1| unknown [Zea mays] gi|414866704|tpg|DAA45261.1| TPA: hypothetical
protein ZEAMMB73_241728 [Zea mays]
Length = 516
Score = 309 bits (791), Expect = 3e-81
Identities = 184/465 (39%), Positives = 256/465 (55%), Gaps = 32/465 (6%)
Frame = -1
Query: 1396 RWKPDFKRKVAMMVGYIG--------------HRAIEGELESAIFKAGGMLDTNSDNLDK 1259
RW+ K++V + +GY+G IE LESAIFK+GG+L++N L K
Sbjct: 70 RWESARKKRVVLRIGYVGTDYRGLQKQQELGVDSTIESVLESAIFKSGGILESNYGKLQK 129
Query: 1258 AVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY------------NIRVFSVLPI 1115
W RS+RTDKGVHSLAT+I++K+EIP A N+RVFS+LP
Sbjct: 130 IGWERSSRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDNVRVFSILPA 189
Query: 1114 SQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTV 935
+ F +++C+ R+Y YLLPAE+IGI ++ EE++ +++F IL FEG HPFHNYT
Sbjct: 190 QRSFDVRRECLYREYFYLLPAEIIGIKDDYSSEEMQEHLSEFNKILKGFEGNHPFHNYTA 249
Query: 934 RAQNRK------SKLNTLFSRLKSHAAEASHDETSKIKDDDELVEIDETREPGIRVLEDD 773
RA+ RK + S LKS +++ E+S +E D + I + D
Sbjct: 250 RAKYRKVLAGRHRRAKGASSALKSMSSDTGMAESS----SEESTSPDHDEDLNISSIFDS 305
Query: 772 AIDEDYXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEPDMHDKLSSAHFRRILSFTCS 593
I ED + +QARWLHEPD D+L+++HFR I++ +C
Sbjct: 306 GIPEDTRVNGILKLSEDRL-----------QIQARWLHEPDESDRLNASHFRDIITCSCG 354
Query: 592 DLQSIKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSR 413
DLQ+ +++EL + G SFM HQIRKM+GT+V V RG+LP DII+LSL++FSR
Sbjct: 355 DLQTSSGIQFVELTI------CGVSFMLHQIRKMVGTAVTVKRGLLPRDIIELSLAKFSR 408
Query: 412 IVLPVAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKLTNLGQCVKIDARVNHFYFN 233
IVLP+AP+EVL+L + F R R G ++ T G V FY
Sbjct: 409 IVLPIAPSEVLVLKDNSFCTKSKGGRIVR-PGIQSMNKSEATRKG--------VEEFYRA 459
Query: 232 TLLPALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWDFW 98
LLP + FLDPS P W WLENLD +P +L+EVR+A+ W
Sbjct: 460 ALLPEVAKFLDPSLPPWKEWLENLDRFSGIPGSQLDEVREAYRAW 504
>ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X4
[Citrus sinensis]
Length = 539
Score = 308 bits (790), Expect = 4e-81
Identities = 185/479 (38%), Positives = 269/479 (56%), Gaps = 43/479 (8%)
Frame = -1
Query: 1396 RWKPDFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNLDK 1259
+W+P K+KVA+ VGY+G IEGELE+A+FKAGG+ ++N NL K
Sbjct: 71 KWEPVRKKKVALRVGYVGTDYRGLQMQRDEHSLSTIEGELETAVFKAGGIRESNYGNLQK 130
Query: 1258 AVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY------------NIRVFSVLPI 1115
W+RS+RTDKGVHSLAT+I +K+EIP DA NI+VFS+LP
Sbjct: 131 IAWARSSRTDKGVHSLATMICLKMEIPPDAWKDDPYGIDLAKRVNAHLPRNIKVFSILPS 190
Query: 1114 SQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTV 935
+ F +++C RKY+YLLPAEVIGI+ EI++ I+ F IL+ FEG HPFHNYT
Sbjct: 191 QRSFDPRRECNLRKYSYLLPAEVIGINSQLTAAEIDSHISDFNAILNEFEGEHPFHNYTE 250
Query: 934 RAQNR-------------KSKLNTLFSRLKSHAAEASHDETSKIKDDDELVEIDETREPG 794
R++ R K+ + +FSR++ +E D SK+++ D +E G
Sbjct: 251 RSKYRRKPHKTGCVSKRAKASKDAVFSRVEE--SEGEEDGFSKVEESDG----EEDLGIG 304
Query: 793 IRVLEDD--AIDEDYXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEPDMHDKLSSAHF 620
+ DD A + +N + ++ARWL+E D DKLS++HF
Sbjct: 305 GEISSDDEKANQNSMVSGVHQEDCCNQHANGLKDQNSSSVIRARWLYETDEADKLSASHF 364
Query: 619 RRILSFTCSDLQSIKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIRGVLPPDII 440
R+I S +C L+ Y+E+ + GESFM HQIRKM+GT+VAV R +LP DI+
Sbjct: 365 RKIFSCSCGKLEKSLGFGYVEISI------SGESFMLHQIRKMVGTAVAVKRKLLPRDIL 418
Query: 439 KLSLSRFSRIVLPVAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTK--LTNLGQCVK 266
LSL++ SRIVLP+AP+EVL L ++ FS P G T+ + + + +
Sbjct: 419 TLSLAKHSRIVLPLAPSEVLFLRANSFSVRTRP------------GVTRPEMQTMVESEE 466
Query: 265 IDARVNHFYFNTLLPALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWDFWYAK 89
I V+ FY + +LP + FLD ++ W+ W+ENL++ +P+++L+EVR AW W K
Sbjct: 467 ILKMVDEFYTSVMLPEVSKFLDATKSPWTEWIENLEKFTSIPNEQLDEVRNAWQLWKEK 525
>gb|EPS72857.1| hypothetical protein M569_01902, partial [Genlisea aurea]
Length = 413
Score = 308 bits (788), Expect = 6e-81
Identities = 177/460 (38%), Positives = 252/460 (54%), Gaps = 26/460 (5%)
Frame = -1
Query: 1399 KRWKPDFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNLD 1262
+RW K+KV M +GY+G IEGELE AI+KAGG+ ++N +L+
Sbjct: 3 RRWIAIRKKKVVMRIGYVGSDYRGLQIQRDEQGFSTIEGELEKAIYKAGGIRESNYGDLN 62
Query: 1261 KAVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY------------NIRVFSVLP 1118
K W RS+RTDKGVHSLAT+I+MK+EIP A + +IR+FS+LP
Sbjct: 63 KIGWGRSSRTDKGVHSLATMISMKMEIPEFAWNNDPNGFVLARYVNTYLPNSIRIFSILP 122
Query: 1117 ISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYT 938
+ F + +CI RKY+YLLP E IGI +S +E+ + F DIL+ F G HPFHNYT
Sbjct: 123 SQRSFDVRNECIVRKYSYLLPGETIGIRNDSGADEVHRHLLDFNDILNGFVGDHPFHNYT 182
Query: 937 VRAQNRKSKLNTLFSRLKSHAAEASHDETSKIKDDDELVEIDETREPGIRVLEDDAIDED 758
VR++ RK R + A +S E+ + +D E +E P
Sbjct: 183 VRSKYRKRLPP---GRGSTTATSSSESESEETRDAGGADEEEEEEVP------------- 226
Query: 757 YXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEPDMHDKLSSAHFRRILSFTCSDLQSI 578
V + + P+ ARWL+EPD D++ ++HFRR+ C +++
Sbjct: 227 -----------------VDGKPSSSPVLARWLNEPDERDRIGASHFRRVYECCCGEMKRS 269
Query: 577 KNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPV 398
YIE+ + GESFM HQIRKM+GT++AV RG+LP D+++LSLS+FSRIVLP+
Sbjct: 270 CGSNYIEVSIS------GESFMLHQIRKMVGTAIAVKRGLLPGDVVRLSLSKFSRIVLPL 323
Query: 397 APTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKLTNLGQCVKIDARVNHFYFNTLLPA 218
AP EVL L ++F P ER ++ L + + V+ FY + +LP
Sbjct: 324 APPEVLFLRGNEFGVRKRP--GER--------RPEMVRLAESRDVTELVDDFYGSVMLPE 373
Query: 217 LVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWDFW 98
LV FL+PS+ W W+ LDE R+P+ +L++VRKAW W
Sbjct: 374 LVKFLEPSELPWDDWIRKLDENTRIPEPQLDQVRKAWKAW 413
>ref|XP_004145230.1| PREDICTED: putative tRNA pseudouridine synthase-like [Cucumis
sativus]
Length = 507
Score = 308 bits (788), Expect = 6e-81
Identities = 187/477 (39%), Positives = 258/477 (54%), Gaps = 36/477 (7%)
Frame = -1
Query: 1408 DHSKRWKPDFKRKVAMMVGYIG--------------HRAIEGELESAIFKAGGMLDTNSD 1271
D ++W+ K+KV + +GY+G H IE ELE AI+KAGG+ D+N
Sbjct: 61 DQLRKWQAFRKKKVVLRIGYVGTDYRGLQMQRNQLSHPTIEQELEDAIYKAGGICDSNYG 120
Query: 1270 NLDKAVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXXY------------NIRVFS 1127
NL+K W+RS+RTDKGVHSLAT I +K+EIP A NI+VF
Sbjct: 121 NLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDPCGISLADYINSYLPDNIKVFG 180
Query: 1126 VLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFH 947
++P + F +K+C R Y+YLLPA++IGI EI+ I+ F+DIL SFEG HPFH
Sbjct: 181 IVPAQKRFDPRKECDVRMYSYLLPAKLIGIESKLKTTEIDCHISDFKDILKSFEGDHPFH 240
Query: 946 NYTVRAQNR-----KSKLNTLFSRLKSHAAEASHDE-TSKIKDDDELVE---IDETREPG 794
NYTVR+ R K + L S K + S+ E +++D VE + R P
Sbjct: 241 NYTVRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGSDQENDTFVEGIKEPDQRSPS 300
Query: 793 IRVLEDDAIDEDYXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEPDMHDKLSSAHFRR 614
+ V E+ + + ++ARWLHEPD D++ ++HFRR
Sbjct: 301 LSVCEN---------------LTEVCSKLEDGSELLKGVRARWLHEPDEKDRIGASHFRR 345
Query: 613 ILSFTCSDLQSIKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIRGVLPPDIIKL 434
IL +C L++ +IE+ + GESFM HQIRKMI T+VAV R +LP DII L
Sbjct: 346 ILYCSCGKLETYFGCDFIEISIW------GESFMLHQIRKMIATAVAVKRKLLPRDIITL 399
Query: 433 SLSRFSRIVLPVAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKLTNLGQCVKIDAR 254
SL++FSRIVLP+AP EVL+L + FS P R F L+ + + N
Sbjct: 400 SLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGAPMRSELFTLNESDDIVN---------S 450
Query: 253 VNHFYFNTLLPALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWDFW-YAKH 86
VN FY + +LP + FLD P W W+E LD+ +P++EL+EVR AW W Y +H
Sbjct: 451 VNEFYRSAILPEVTKFLDTESPPWKEWVEKLDKYTSIPNEELDEVRSAWKAWKYREH 507
>gb|EMJ08575.1| hypothetical protein PRUPE_ppa004352mg [Prunus persica]
Length = 515
Score = 306 bits (783), Expect = 2e-80
Identities = 184/471 (39%), Positives = 257/471 (54%), Gaps = 32/471 (6%)
Frame = -1
Query: 1405 HSKRWKPDFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDN 1268
H ++W+ K+KV + VGY+G IE ELE+AIF AGG+ D+N N
Sbjct: 52 HLEKWQSVRKKKVVLRVGYVGSDYRGLQMQRDEHSLSTIEKELETAIFNAGGIRDSNLGN 111
Query: 1267 LDKAVWSRSNRTDKGVHSLATIIAMKLEIPRDAXXXXXXX------------YNIRVFSV 1124
L+K W+RS+RTDKGVHSLAT+I+ K+EIP A +NI+VFS+
Sbjct: 112 LNKIAWARSSRTDKGVHSLATMISFKMEIPEKAWDGDPYGIALVNHINYYLPHNIKVFSI 171
Query: 1123 LPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHN 944
LP + F +K+C R Y+YLLPA+VIGI + EI+ I+ F IL+ FEG HPFHN
Sbjct: 172 LPAQRSFDPRKECNLRMYSYLLPADVIGIKSHFSSAEIDYHISDFNSILNCFEGEHPFHN 231
Query: 943 YTVRAQNR------KSKLNTLFSRLKSHAAEASHDETSKIKDDDELVEIDETREPGIRVL 782
YT+R++ R KS+ + S EAS E+ + D DE + T E VL
Sbjct: 232 YTIRSKYRRKLPVKKSRRHGSVSITGRSTGEASASESEE-SDVDENFDGTNTPESDAEVL 290
Query: 781 EDDAIDEDYXXXXXXXXXXGIIPTTVGSENIAPPLQARWLHEPDMHDKLSSAHFRRILSF 602
++ ++ ++ARWL+EPD D++S++HFR+I
Sbjct: 291 NQNSSPSSNSEGNLRNACEKQ-GDGGNDQSAGSVIRARWLYEPDERDRISASHFRKIFLC 349
Query: 601 TCSDLQSIKNQRYIELMVXXXXXXXGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSR 422
+C L+ Y+EL + GESFM HQIRKM+GT+VA+ R +LP DI+ LSL+
Sbjct: 350 SCGKLEKSLGHDYVELSIS------GESFMLHQIRKMVGTAVAIKRKLLPRDILTLSLAM 403
Query: 421 FSRIVLPVAPTEVLILHSSQFSFTHDPWRDERVSGFALSGTTKLTNLGQCVKIDARVNHF 242
FSRI+LP+AP+EVL L ++FS P R A + G+ +K V+ F
Sbjct: 404 FSRIILPLAPSEVLFLRGNRFSIRGRPGNVTRPEMMA------MVESGEIIK---AVDEF 454
Query: 241 YFNTLLPALVDFLDPSQPLWSVWLENLDEKCRLPDDELNEVRKAWDFWYAK 89
Y + +LP + FL+PS W W+ENLD +PD EL+EVR AW W K
Sbjct: 455 YTSVMLPEVSKFLEPSGYPWKEWVENLDRNTGIPDAELDEVRNAWKVWKEK 505