BLASTX nr result
ID: Ephedra25_contig00018714
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00018714
(520 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002307797.2| hypothetical protein POPTR_0005s27370g [Popu... 80 2e-13
ref|XP_002510687.1| pentatricopeptide repeat-containing protein,... 80 2e-13
ref|XP_006855740.1| hypothetical protein AMTR_s00044p00163060 [A... 78 1e-12
gb|EXB28634.1| hypothetical protein L484_003157 [Morus notabilis] 77 2e-12
gb|EOY15290.1| Tetratricopeptide repeat-like superfamily protein... 77 3e-12
ref|XP_006353005.1| PREDICTED: pentatricopeptide repeat-containi... 76 4e-12
ref|XP_004233156.1| PREDICTED: pentatricopeptide repeat-containi... 76 4e-12
ref|XP_003556649.1| PREDICTED: pentatricopeptide repeat-containi... 76 5e-12
ref|XP_003528528.1| PREDICTED: pentatricopeptide repeat-containi... 73 3e-11
ref|XP_002272601.1| PREDICTED: pentatricopeptide repeat-containi... 73 3e-11
emb|CAN74746.1| hypothetical protein VITISV_012024 [Vitis vinifera] 73 3e-11
ref|XP_004165449.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 73 5e-11
ref|XP_004139567.1| PREDICTED: pentatricopeptide repeat-containi... 73 5e-11
ref|XP_006473802.1| PREDICTED: pentatricopeptide repeat-containi... 72 6e-11
gb|ESW32616.1| hypothetical protein PHAVU_001G002700g [Phaseolus... 72 6e-11
ref|XP_006435379.1| hypothetical protein CICLE_v10000935mg [Citr... 72 6e-11
ref|XP_004512916.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
ref|XP_006290421.1| hypothetical protein CARUB_v10019196mg [Caps... 70 3e-10
gb|EMJ11178.1| hypothetical protein PRUPE_ppa005053mg [Prunus pe... 69 5e-10
ref|NP_178295.2| pentatricopeptide repeat-containing protein [Ar... 69 6e-10
>ref|XP_002307797.2| hypothetical protein POPTR_0005s27370g [Populus trichocarpa]
gi|550339854|gb|EEE94793.2| hypothetical protein
POPTR_0005s27370g [Populus trichocarpa]
Length = 479
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/63 (60%), Positives = 48/63 (76%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
VVI++ LN+L +A RYF+ +KEAGLSPT DIY NL+ LY +SGR+ KCKE+ KE EM
Sbjct: 382 VVIKLFVALNDLPRAVRYFSKLKEAGLSPTYDIYRNLITLYMVSGRLAKCKEVWKEAEMA 441
Query: 184 GMK 192
G K
Sbjct: 442 GFK 444
>ref|XP_002510687.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223551388|gb|EEF52874.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 469
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/63 (58%), Positives = 49/63 (77%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
VVI++ LN+L +A RYF+ +KEAGLSPT DIY NL+++Y +SGR+ KCKE+ KE EM
Sbjct: 387 VVIKLFVALNDLPRAVRYFSKLKEAGLSPTYDIYRNLIKIYLVSGRLAKCKEIWKEAEMA 446
Query: 184 GMK 192
G K
Sbjct: 447 GFK 449
>ref|XP_006855740.1| hypothetical protein AMTR_s00044p00163060 [Amborella trichopoda]
gi|548859527|gb|ERN17207.1| hypothetical protein
AMTR_s00044p00163060 [Amborella trichopoda]
Length = 553
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/63 (53%), Positives = 48/63 (76%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
V+IR+C L++L++A RYF+ +K+AG SPT DIY +L+ LY GR+ KC+E+ KEMEM
Sbjct: 456 VIIRLCVALDDLARAVRYFSRLKDAGFSPTHDIYSDLIELYARRGRLAKCREIRKEMEMV 515
Query: 184 GMK 192
G K
Sbjct: 516 GFK 518
>gb|EXB28634.1| hypothetical protein L484_003157 [Morus notabilis]
Length = 495
Score = 77.0 bits (188), Expect = 2e-12
Identities = 34/63 (53%), Positives = 49/63 (77%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
VVIR+ LN+LS+A+RYF+ +KE+G SPT DIY +++ LY +SGR+ KC+++ KE EM
Sbjct: 415 VVIRLFVALNDLSRASRYFSRLKESGFSPTYDIYRDVIELYMVSGRLAKCRDVCKEAEMA 474
Query: 184 GMK 192
G K
Sbjct: 475 GFK 477
>gb|EOY15290.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 533
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/73 (50%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
V I++ LN+LS+A RYF+ +KEAG SPT DIY +L+ +Y +SGR+ KCKE+ KE EM
Sbjct: 445 VAIKVFVALNDLSRAVRYFSKLKEAGFSPTYDIYRDLISIYMVSGRLAKCKEVCKEAEMA 504
Query: 184 G--MKPHSVACLN 216
G + H++A L+
Sbjct: 505 GFSLDKHTLAQLS 517
>ref|XP_006353005.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01860-like [Solanum tuberosum]
Length = 509
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/63 (55%), Positives = 48/63 (76%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
VVI++ LN+LS+A RYF+ +KEAG SPT DIY +L+++Y SGRV KCK++ KE EM
Sbjct: 436 VVIKLFVALNDLSRAVRYFSKLKEAGFSPTFDIYCSLIKVYMASGRVAKCKDICKEAEMA 495
Query: 184 GMK 192
G +
Sbjct: 496 GFR 498
>ref|XP_004233156.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01860-like [Solanum lycopersicum]
Length = 507
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/63 (55%), Positives = 48/63 (76%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
VVI++ LN+LS+A RYF+ +KEAG SPT DIY +L+++Y SGRV KCK++ KE EM
Sbjct: 434 VVIKLFVALNDLSRAVRYFSKLKEAGFSPTFDIYCSLIKVYMASGRVAKCKDICKEAEMA 493
Query: 184 GMK 192
G +
Sbjct: 494 GFR 496
>ref|XP_003556649.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01860-like isoform X1 [Glycine max]
gi|571563464|ref|XP_006605479.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g01860-like isoform X2 [Glycine max]
Length = 480
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/63 (53%), Positives = 47/63 (74%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
VVI++ LN+LS+A RYF+ +KEAG SP+ +Y+++L +Y SGR+ KCKEL KE EM
Sbjct: 407 VVIKLFVALNDLSRATRYFSKLKEAGFSPSFGLYKDMLHIYMASGRIAKCKELCKEAEMS 466
Query: 184 GMK 192
G K
Sbjct: 467 GFK 469
>ref|XP_003528528.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01860-like isoform X1 [Glycine max]
gi|571467300|ref|XP_006583897.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g01860-like isoform X2 [Glycine max]
Length = 478
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/63 (50%), Positives = 48/63 (76%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
VVI++ LN+LS+A RYF+ +KEAG SP+ +Y+++L++Y SGR+ KCKEL +E E+
Sbjct: 407 VVIKLFVALNDLSRATRYFSKLKEAGFSPSFGLYKDMLQIYMASGRIAKCKELCREAEIA 466
Query: 184 GMK 192
G K
Sbjct: 467 GFK 469
>ref|XP_002272601.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01860-like [Vitis vinifera]
Length = 514
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/63 (50%), Positives = 47/63 (74%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
VVI++ LN+LS+ RYF+ +KEAG SPT DIY ++L++Y + R+ KC+E+ KE+EM
Sbjct: 435 VVIKLFIALNDLSRTGRYFSKLKEAGFSPTYDIYRDMLKIYMVFRRLAKCREVCKELEMS 494
Query: 184 GMK 192
G K
Sbjct: 495 GFK 497
>emb|CAN74746.1| hypothetical protein VITISV_012024 [Vitis vinifera]
Length = 514
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/63 (50%), Positives = 47/63 (74%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
VVI++ LN+LS+ RYF+ +KEAG SPT DIY ++L++Y + R+ KC+E+ KE+EM
Sbjct: 435 VVIKLFIALNDLSRTGRYFSKLKEAGFSPTYDIYRDMLKIYMVFRRLAKCREVCKELEMS 494
Query: 184 GMK 192
G K
Sbjct: 495 GFK 497
>ref|XP_004165449.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g01860-like [Cucumis sativus]
Length = 489
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +1
Query: 1 SVVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEM 180
SVVI++ L +LS+A RYFA +KEAG SPT ++Y N++ +Y +SGR+ KCKE+ KE E
Sbjct: 412 SVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAEN 471
Query: 181 QG 186
G
Sbjct: 472 AG 473
>ref|XP_004139567.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01860-like [Cucumis sativus]
Length = 489
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +1
Query: 1 SVVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEM 180
SVVI++ L +LS+A RYFA +KEAG SPT ++Y N++ +Y +SGR+ KCKE+ KE E
Sbjct: 412 SVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAEN 471
Query: 181 QG 186
G
Sbjct: 472 AG 473
>ref|XP_006473802.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01860-like [Citrus sinensis]
Length = 493
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/63 (49%), Positives = 47/63 (74%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
VVI++ LN++S+A RYF+ +KEAG PT DIY +++R++ SGR+ KC+++ KE EM
Sbjct: 410 VVIKLFVALNDISRAIRYFSKLKEAGFCPTYDIYRDMIRIFMASGRLAKCRDVCKEAEMA 469
Query: 184 GMK 192
G K
Sbjct: 470 GFK 472
>gb|ESW32616.1| hypothetical protein PHAVU_001G002700g [Phaseolus vulgaris]
gi|561034087|gb|ESW32617.1| hypothetical protein
PHAVU_001G002700g [Phaseolus vulgaris]
Length = 497
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/63 (50%), Positives = 47/63 (74%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
VVI++ LN+LS+A RYF+ +KEAG SPT +Y+++L++Y SGR KCKE+ KE ++
Sbjct: 422 VVIKLFVALNDLSRAMRYFSKLKEAGFSPTFGLYKDMLQIYMASGRTAKCKEICKEADIA 481
Query: 184 GMK 192
G K
Sbjct: 482 GFK 484
>ref|XP_006435379.1| hypothetical protein CICLE_v10000935mg [Citrus clementina]
gi|557537501|gb|ESR48619.1| hypothetical protein
CICLE_v10000935mg [Citrus clementina]
Length = 498
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/63 (49%), Positives = 47/63 (74%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
VVI++ LN++S+A RYF+ +KEAG PT DIY +++R++ SGR+ KC+++ KE EM
Sbjct: 410 VVIKLFVALNDISRAIRYFSKLKEAGFCPTYDIYRDMIRIFMASGRLAKCRDVCKEAEMA 469
Query: 184 GMK 192
G K
Sbjct: 470 GFK 472
>ref|XP_004512916.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01860-like [Cicer arietinum]
Length = 550
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/61 (50%), Positives = 46/61 (75%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
VVI++ LN+LS+A RYF+ +KEAG SPT +Y+++L +Y SGR+ KC+E+ KE E+
Sbjct: 473 VVIKVFVALNDLSRAMRYFSKLKEAGFSPTYGLYKDMLDIYMASGRIAKCREIYKEAEIA 532
Query: 184 G 186
G
Sbjct: 533 G 533
>ref|XP_006290421.1| hypothetical protein CARUB_v10019196mg [Capsella rubella]
gi|482559128|gb|EOA23319.1| hypothetical protein
CARUB_v10019196mg [Capsella rubella]
Length = 484
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/63 (49%), Positives = 47/63 (74%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
VVIR+ L++L +A RY++ +KEAG SPT DIY +++ +Y SGR+ KCKE+ KE+E
Sbjct: 403 VVIRLFVALDDLGRAMRYYSKLKEAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDA 462
Query: 184 GMK 192
G++
Sbjct: 463 GLR 465
>gb|EMJ11178.1| hypothetical protein PRUPE_ppa005053mg [Prunus persica]
Length = 479
Score = 69.3 bits (168), Expect = 5e-10
Identities = 28/63 (44%), Positives = 47/63 (74%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
V I++ LN+L +A RY + +KEAG SPT D+Y +L+++Y +SGR+ KC+++ KE+++
Sbjct: 397 VAIKLFVALNDLPRAVRYISKLKEAGFSPTYDVYRDLIKMYMVSGRLAKCRDVCKEVDIA 456
Query: 184 GMK 192
G K
Sbjct: 457 GFK 459
>ref|NP_178295.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75110949|sp|Q5XET4.1|PP142_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g01860; AltName: Full=Protein EMBRYO DEFECTIVE 975
gi|53850483|gb|AAU95418.1| At2g01860 [Arabidopsis
thaliana] gi|55733739|gb|AAV59266.1| At2g01860
[Arabidopsis thaliana] gi|110738080|dbj|BAF00974.1|
hypothetical protein [Arabidopsis thaliana]
gi|330250415|gb|AEC05509.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 486
Score = 68.9 bits (167), Expect = 6e-10
Identities = 30/63 (47%), Positives = 47/63 (74%)
Frame = +1
Query: 4 VVIRICSQLNELSKAARYFAHMKEAGLSPTCDIYENLLRLYQLSGRVQKCKELLKEMEMQ 183
VVI++ L++L +A RY++ +KEAG SPT DIY +++ +Y SGR+ KCKE+ KE+E
Sbjct: 403 VVIKLFVALDDLGRAMRYYSKLKEAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDA 462
Query: 184 GMK 192
G++
Sbjct: 463 GLR 465