BLASTX nr result

ID: Ephedra25_contig00018627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00018627
         (514 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ELR44854.1| hypothetical protein M91_08152, partial [Bos mutus]     60   4e-07
ref|XP_004916500.1| PREDICTED: salivary glue protein Sgs-4-like ...    57   3e-06
ref|XP_003909413.1| PREDICTED: mucin-2-like, partial [Papio anubis]    55   1e-05

>gb|ELR44854.1| hypothetical protein M91_08152, partial [Bos mutus]
          Length = 208

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 44/173 (25%), Positives = 65/173 (37%), Gaps = 4/173 (2%)
 Frame = -3

Query: 512 SDPNQHFGQQY*NDLQMHPNA*YHTGQNQHFEQIH*DDSEMLLNL*LHTDPKQHFRQNSK 333
           +DP  H G Q   D Q H +   HTG   H        ++       HTD + H      
Sbjct: 38  TDPQAHTGSQAHTDTQAHTHPQAHTGTQAHTHPQAHTGTQAHTGTQAHTDTQAH------ 91

Query: 332 TGSGKHLIP*FYSDPNQHFGQNH*YDSETPPNLQFHSDPNLDSASKTPRNP*LHSDPNPH 153
           T    H  P  ++DP  H G     D +   + Q H+DP   + S+   +   H+ P  H
Sbjct: 92  TDPQAHTDPQAHTDPQAHTGTQAHTDPQAHTDPQAHTDPQAHTGSQAHTDTQAHTHPQAH 151

Query: 152 SA*----YP*FHTDPNPHSALYHPNDSQTPPSP*FHTDPNLHSI*DPPNDSQM 6
           +      +P  HT    H+       +Q       HTDP  H+      D+Q+
Sbjct: 152 TGTQAHTHPQAHTGTQAHTGTQAHTGTQAHTDTQAHTDPQAHTGSQAHTDTQV 204


>ref|XP_004916500.1| PREDICTED: salivary glue protein Sgs-4-like [Xenopus (Silurana)
           tropicalis]
          Length = 282

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 1/171 (0%)
 Frame = -3

Query: 512 SDPNQHFGQQY*NDLQMHPNA*YHTGQNQHFEQIH*DDSEMLLNL*LHTDPKQHFRQNSK 333
           S+P+ H      ++  MH     H+  + H E              +H++P  H   +  
Sbjct: 3   SEPSMHSEPSMHSEPSMHSEPSMHSEPSMHSEPS------------MHSEPSMHSEPSMH 50

Query: 332 TGSGKHLIP*FYSDPNQHFGQNH*YDSETPPNLQFHSDPNLDSASKTPRNP*LHSDPNPH 153
           +    H  P  +S+P     +     SE P     HS+P++ S       P +HS+P+ H
Sbjct: 51  SEPSMHSEPSMHSEPPSMHSEPPSMHSEPP---SMHSEPSMHSEPSMHSEPSMHSEPSMH 107

Query: 152 SA*YP*FHTDPNPHSALYHPNDSQTPPSP*FHTD-PNLHSI*DPPNDSQMP 3
           S   P  H++P+ HS    P+    PPS   H++ P++HS  +PP+    P
Sbjct: 108 SE--PSMHSEPSMHS---EPSMHSEPPS--MHSEPPSMHS--EPPSMHSEP 149


>ref|XP_003909413.1| PREDICTED: mucin-2-like, partial [Papio anubis]
          Length = 1189

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 4/148 (2%)
 Frame = -3

Query: 476 NDLQMHPNA*YHTGQNQHFEQIH*DDSEMLLNL*LHTDPK----QHFRQNSKTGSGKHLI 309
           N    +PN   H+  N +  Q H D +    +   H +P     QH   N  T +  H  
Sbjct: 20  NHRDPNPNTYQHSDTNPNTHQ-HPDPNFDTHHHHQHHNPNPDTHQHTDPNHSTNTYHHH- 77

Query: 308 P*FYSDPNQHFGQNH*YDSETPPNLQFHSDPNLDSASKTPRNP*LHSDPNPHSA*YP*FH 129
              YSDPN +  Q+H   S+T P+   H DPN ++   +  NP  H D NP +      H
Sbjct: 78  --HYSDPNPNTHQHH--YSDTNPDTYNHRDPNPNTYQHSDTNPNTHHDTNPDTY----NH 129

Query: 128 TDPNPHSALYHPNDSQTPPSP*FHTDPN 45
            DPNP++  +    S T P+   H DPN
Sbjct: 130 RDPNPNTYQH----SDTNPNTHQHPDPN 153


Top