BLASTX nr result
ID: Ephedra25_contig00018574
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00018574
(579 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006591551.1| PREDICTED: photosystem II stability/assembly... 87 2e-15
ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly... 87 2e-15
gb|EXB55168.1| hypothetical protein L484_018094 [Morus notabilis] 86 5e-15
gb|ESW03628.1| hypothetical protein PHAVU_011G029800g [Phaseolus... 86 5e-15
ref|XP_004505712.1| PREDICTED: LOW QUALITY PROTEIN: photosystem ... 86 5e-15
ref|XP_003607248.1| Photosystem II stability/assembly factor HCF... 86 5e-15
ref|XP_006380513.1| hypothetical protein POPTR_0007s07780g [Popu... 86 7e-15
ref|XP_002310654.1| hypothetical protein POPTR_0007s07780g [Popu... 86 7e-15
ref|XP_006394580.1| hypothetical protein EUTSA_v10004338mg [Eutr... 86 9e-15
ref|XP_006287854.1| hypothetical protein CARUB_v10001080mg [Caps... 86 9e-15
ref|NP_197703.1| photosystem II stability/assembly factor HCF136... 86 9e-15
ref|XP_002872037.1| HCF136 [Arabidopsis lyrata subsp. lyrata] gi... 86 9e-15
dbj|BAD94976.1| photosystem II stability/assembly factor HCF136 ... 86 9e-15
ref|XP_006847864.1| hypothetical protein AMTR_s00029p00083110 [A... 85 2e-14
gb|EOX99131.1| Photosystem II stability/assembly factor, chlorop... 84 2e-14
ref|XP_006437570.1| hypothetical protein CICLE_v10031672mg [Citr... 84 3e-14
ref|XP_004966550.1| PREDICTED: photosystem II stability/assembly... 84 3e-14
gb|AFW75693.1| plastid high chlorophyll fluorescence 136 Precurs... 83 4e-14
gb|ABQ53629.1| plastid high chlorophyll fluorescence 136 precurs... 83 4e-14
ref|XP_002439075.1| hypothetical protein SORBIDRAFT_10g031120 [S... 83 6e-14
>ref|XP_006591551.1| PREDICTED: photosystem II stability/assembly factor HCF136,
chloroplastic-like [Glycine max]
Length = 367
Score = 87.4 bits (215), Expect = 2e-15
Identities = 40/44 (90%), Positives = 44/44 (100%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK+WIRDKAADNIAANLY+VKFIDEKKGFVLGNDGVLLRY+G
Sbjct: 324 NGGKSWIRDKAADNIAANLYSVKFIDEKKGFVLGNDGVLLRYLG 367
>ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly factor HCF136,
chloroplastic-like [Glycine max]
Length = 393
Score = 87.4 bits (215), Expect = 2e-15
Identities = 40/44 (90%), Positives = 44/44 (100%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK+WIRDKAADNIAANLY+VKFIDEKKGFVLGNDGVLLRY+G
Sbjct: 350 NGGKSWIRDKAADNIAANLYSVKFIDEKKGFVLGNDGVLLRYLG 393
>gb|EXB55168.1| hypothetical protein L484_018094 [Morus notabilis]
Length = 415
Score = 86.3 bits (212), Expect = 5e-15
Identities = 39/44 (88%), Positives = 44/44 (100%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK+WIRDKAADNIAANLY+VKFID+KKGFVLGNDGVLLRY+G
Sbjct: 372 NGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 415
>gb|ESW03628.1| hypothetical protein PHAVU_011G029800g [Phaseolus vulgaris]
Length = 395
Score = 86.3 bits (212), Expect = 5e-15
Identities = 39/44 (88%), Positives = 44/44 (100%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK+WIRDKAADNIAANLY+VKFID+KKGFVLGNDGVLLRY+G
Sbjct: 352 NGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 395
>ref|XP_004505712.1| PREDICTED: LOW QUALITY PROTEIN: photosystem II stability/assembly
factor HCF136, chloroplastic-like [Cicer arietinum]
Length = 391
Score = 86.3 bits (212), Expect = 5e-15
Identities = 39/44 (88%), Positives = 44/44 (100%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK+WIRDKAADNIAANLY+VKFID+KKGFVLGNDGVLLRY+G
Sbjct: 348 NGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 391
>ref|XP_003607248.1| Photosystem II stability/assembly factor HCF136 [Medicago
truncatula] gi|355508303|gb|AES89445.1| Photosystem II
stability/assembly factor HCF136 [Medicago truncatula]
Length = 396
Score = 86.3 bits (212), Expect = 5e-15
Identities = 39/44 (88%), Positives = 44/44 (100%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK+WIRDKAADNIAANLY+VKFID+KKGFVLGNDGVLLRY+G
Sbjct: 353 NGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 396
>ref|XP_006380513.1| hypothetical protein POPTR_0007s07780g [Populus trichocarpa]
gi|550334365|gb|ERP58310.1| hypothetical protein
POPTR_0007s07780g [Populus trichocarpa]
Length = 330
Score = 85.9 bits (211), Expect = 7e-15
Identities = 39/44 (88%), Positives = 43/44 (97%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGKTW RDKAADNIAANLY+VKFID+KKGFVLGNDGVLLRY+G
Sbjct: 287 NGGKTWTRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 330
>ref|XP_002310654.1| hypothetical protein POPTR_0007s07780g [Populus trichocarpa]
gi|566180140|ref|XP_006380512.1| hypothetical protein
POPTR_0007s07780g [Populus trichocarpa]
gi|566180148|ref|XP_006380516.1| hypothetical protein
POPTR_0007s07780g [Populus trichocarpa]
gi|222853557|gb|EEE91104.1| hypothetical protein
POPTR_0007s07780g [Populus trichocarpa]
gi|550334364|gb|ERP58309.1| hypothetical protein
POPTR_0007s07780g [Populus trichocarpa]
gi|550334368|gb|ERP58313.1| hypothetical protein
POPTR_0007s07780g [Populus trichocarpa]
Length = 394
Score = 85.9 bits (211), Expect = 7e-15
Identities = 39/44 (88%), Positives = 43/44 (97%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGKTW RDKAADNIAANLY+VKFID+KKGFVLGNDGVLLRY+G
Sbjct: 351 NGGKTWTRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 394
>ref|XP_006394580.1| hypothetical protein EUTSA_v10004338mg [Eutrema salsugineum]
gi|557091219|gb|ESQ31866.1| hypothetical protein
EUTSA_v10004338mg [Eutrema salsugineum]
Length = 404
Score = 85.5 bits (210), Expect = 9e-15
Identities = 39/44 (88%), Positives = 43/44 (97%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK+W RDKAADNIAANLYAVKF+D+KKGFVLGNDGVLLRYVG
Sbjct: 361 NGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 404
>ref|XP_006287854.1| hypothetical protein CARUB_v10001080mg [Capsella rubella]
gi|482556560|gb|EOA20752.1| hypothetical protein
CARUB_v10001080mg [Capsella rubella]
Length = 411
Score = 85.5 bits (210), Expect = 9e-15
Identities = 39/44 (88%), Positives = 43/44 (97%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK+W RDKAADNIAANLYAVKF+D+KKGFVLGNDGVLLRYVG
Sbjct: 368 NGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 411
>ref|NP_197703.1| photosystem II stability/assembly factor HCF136 [Arabidopsis
thaliana] gi|6016183|sp|O82660.1|P2SAF_ARATH RecName:
Full=Photosystem II stability/assembly factor HCF136,
chloroplastic; Flags: Precursor
gi|3559807|emb|CAA75723.1| HCF136 protein [Arabidopsis
thaliana] gi|9759370|dbj|BAB09829.1| photosystem II
stability/assembly factor HCF136 [Arabidopsis thaliana]
gi|15010780|gb|AAK74049.1| AT5g23120/MYJ24_11
[Arabidopsis thaliana] gi|28416529|gb|AAO42795.1|
At5g23120/MYJ24_11 [Arabidopsis thaliana]
gi|332005741|gb|AED93124.1| photosystem II
stability/assembly factor HCF136 [Arabidopsis thaliana]
Length = 403
Score = 85.5 bits (210), Expect = 9e-15
Identities = 39/44 (88%), Positives = 43/44 (97%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK+W RDKAADNIAANLYAVKF+D+KKGFVLGNDGVLLRYVG
Sbjct: 360 NGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 403
>ref|XP_002872037.1| HCF136 [Arabidopsis lyrata subsp. lyrata]
gi|297317874|gb|EFH48296.1| HCF136 [Arabidopsis lyrata
subsp. lyrata]
Length = 393
Score = 85.5 bits (210), Expect = 9e-15
Identities = 39/44 (88%), Positives = 43/44 (97%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK+W RDKAADNIAANLYAVKF+D+KKGFVLGNDGVLLRYVG
Sbjct: 350 NGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 393
>dbj|BAD94976.1| photosystem II stability/assembly factor HCF136 [Arabidopsis
thaliana]
Length = 71
Score = 85.5 bits (210), Expect = 9e-15
Identities = 39/44 (88%), Positives = 43/44 (97%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK+W RDKAADNIAANLYAVKF+D+KKGFVLGNDGVLLRYVG
Sbjct: 28 NGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 71
>ref|XP_006847864.1| hypothetical protein AMTR_s00029p00083110 [Amborella trichopoda]
gi|548851169|gb|ERN09445.1| hypothetical protein
AMTR_s00029p00083110 [Amborella trichopoda]
Length = 412
Score = 84.7 bits (208), Expect = 2e-14
Identities = 39/44 (88%), Positives = 43/44 (97%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGKTWIRDKAAD+IAANLY+VKFIDEK GFVLGNDGVLLRY+G
Sbjct: 369 NGGKTWIRDKAADSIAANLYSVKFIDEKTGFVLGNDGVLLRYLG 412
>gb|EOX99131.1| Photosystem II stability/assembly factor, chloroplast (HCF136)
isoform 1 [Theobroma cacao]
Length = 411
Score = 84.3 bits (207), Expect = 2e-14
Identities = 38/44 (86%), Positives = 43/44 (97%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK+W RDKAADNIAANLY+VKFID+KKGFVLGNDGVLLRY+G
Sbjct: 368 NGGKSWTRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 411
>ref|XP_006437570.1| hypothetical protein CICLE_v10031672mg [Citrus clementina]
gi|567890101|ref|XP_006437571.1| hypothetical protein
CICLE_v10031672mg [Citrus clementina]
gi|568862130|ref|XP_006484542.1| PREDICTED: photosystem
II stability/assembly factor HCF136, chloroplastic-like
isoform X1 [Citrus sinensis]
gi|568862132|ref|XP_006484543.1| PREDICTED: photosystem
II stability/assembly factor HCF136, chloroplastic-like
isoform X2 [Citrus sinensis] gi|557539766|gb|ESR50810.1|
hypothetical protein CICLE_v10031672mg [Citrus
clementina] gi|557539767|gb|ESR50811.1| hypothetical
protein CICLE_v10031672mg [Citrus clementina]
Length = 415
Score = 84.0 bits (206), Expect = 3e-14
Identities = 38/44 (86%), Positives = 44/44 (100%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGKTWIR+KAADNIAANLY+VKFI+EKKGFVLGNDGVLL+Y+G
Sbjct: 372 NGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYLG 415
>ref|XP_004966550.1| PREDICTED: photosystem II stability/assembly factor HCF136,
chloroplastic-like [Setaria italica]
Length = 395
Score = 83.6 bits (205), Expect = 3e-14
Identities = 36/44 (81%), Positives = 43/44 (97%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK W+RDKAADNIAANLY+VKF+D++KGFVLGNDGVLLRY+G
Sbjct: 352 NGGKNWVRDKAADNIAANLYSVKFLDDRKGFVLGNDGVLLRYLG 395
>gb|AFW75693.1| plastid high chlorophyll fluorescence 136 Precursor [Zea mays]
Length = 394
Score = 83.2 bits (204), Expect = 4e-14
Identities = 36/44 (81%), Positives = 44/44 (100%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK+W+RDKAADNIAANLY+VKF+D++KGFVLGNDGVLLRY+G
Sbjct: 351 NGGKSWMRDKAADNIAANLYSVKFLDDRKGFVLGNDGVLLRYLG 394
>gb|ABQ53629.1| plastid high chlorophyll fluorescence 136 precursor [Zea mays]
Length = 394
Score = 83.2 bits (204), Expect = 4e-14
Identities = 36/44 (81%), Positives = 44/44 (100%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK+W+RDKAADNIAANLY+VKF+D++KGFVLGNDGVLLRY+G
Sbjct: 351 NGGKSWMRDKAADNIAANLYSVKFLDDRKGFVLGNDGVLLRYLG 394
>ref|XP_002439075.1| hypothetical protein SORBIDRAFT_10g031120 [Sorghum bicolor]
gi|241917298|gb|EER90442.1| hypothetical protein
SORBIDRAFT_10g031120 [Sorghum bicolor]
Length = 397
Score = 82.8 bits (203), Expect = 6e-14
Identities = 36/44 (81%), Positives = 42/44 (95%)
Frame = +1
Query: 4 DGGKTWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYVG 135
+GGK W+RDKAADNIAANLY+VKF+D+ KGFVLGNDGVLLRY+G
Sbjct: 354 NGGKNWVRDKAADNIAANLYSVKFLDDSKGFVLGNDGVLLRYLG 397