BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00018540
         (946 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006847924.1| hypothetical protein AMTR_s00029p00122290 [A...   390   e-106
ref|XP_004986033.1| PREDICTED: THO complex subunit 1-like [Setar...   374   e-101
ref|XP_006649251.1| PREDICTED: THO complex subunit 1-like [Oryza...   372   e-101
ref|XP_002468664.1| hypothetical protein SORBIDRAFT_01g049910 [S...   371   e-100
ref|NP_001159168.1| hypothetical protein [Zea mays] gi|223942431...   370   e-100
dbj|BAK02227.1| predicted protein [Hordeum vulgare subsp. vulgare]    370   e-100
ref|XP_003558999.1| PREDICTED: THO complex subunit 1-like [Brach...   367   4e-99
ref|XP_004307195.1| PREDICTED: THO complex subunit 1-like [Fraga...   366   6e-99
ref|NP_001048715.1| Os03g0110400 [Oryza sativa Japonica Group] g...   362   1e-97
ref|XP_006465778.1| PREDICTED: THO complex subunit 1-like isofor...   360   4e-97
ref|XP_006465777.1| PREDICTED: THO complex subunit 1-like isofor...   360   4e-97
ref|XP_006432406.1| hypothetical protein CICLE_v10000631mg [Citr...   359   7e-97
ref|XP_006347676.1| PREDICTED: THO complex subunit 1-like [Solan...   357   3e-96
ref|XP_002529986.1| nuclear matrix protein, putative [Ricinus co...   357   4e-96
gb|EOY19641.1| Nuclear matrix protein-related isoform 4, partial...   356   6e-96
gb|EOY19638.1| Nuclear matrix protein-related isoform 1 [Theobro...   356   6e-96
ref|XP_002264619.2| PREDICTED: THO complex subunit 1-like [Vitis...   356   6e-96
emb|CBI35079.3| unnamed protein product [Vitis vinifera]              356   6e-96
ref|XP_004230044.1| PREDICTED: THO complex subunit 1-like [Solan...   356   8e-96
ref|XP_001753133.1| predicted protein [Physcomitrella patens] gi...   356   8e-96

>ref|XP_006847924.1| hypothetical protein AMTR_s00029p00122290 [Amborella trichopoda]
           gi|548851229|gb|ERN09505.1| hypothetical protein
           AMTR_s00029p00122290 [Amborella trichopoda]
          Length = 667

 Score =  390 bits (1003), Expect = e-106
 Identities = 200/265 (75%), Positives = 223/265 (84%), Gaps = 3/265 (1%)
 Frame = +1

Query: 148 MAEAPRPLRVQLN---PPPQKLPVIVSSHADRDRVQDVFREALSKPGHPSTFAIQAMQEA 318
           MAEA   LR+ L+   P  ++ P+ VSSHADR+RV +VFR ALS+ G P+ FA+Q +QEA
Sbjct: 1   MAEATPQLRILLHQQQPQKERSPITVSSHADRNRVLEVFRRALSQVGPPANFALQTVQEA 60

Query: 319 VKPQKQTVLVQDENQLLENGLRTLLQELVAGAVKAGLPAMQYGSSIAEDESSCGLIPRLL 498
           +KPQKQTVLVQDENQ LEN LR LLQEL + AV+ G   MQYG SI    S  GLIPRLL
Sbjct: 61  IKPQKQTVLVQDENQSLENALRALLQELASSAVQLGERTMQYGQSIDGAGSMPGLIPRLL 120

Query: 499 DIVLYLCEGGHVEGGMIFQLLEDLTEMSTMKDCKEVFGYIESKQDILGKQELFGRGKLVM 678
           DIVLYLCE  HVEGGMIFQLLEDLTEMST++DCKEVFGYIESKQDILGKQELFGRGKLVM
Sbjct: 121 DIVLYLCEQSHVEGGMIFQLLEDLTEMSTIRDCKEVFGYIESKQDILGKQELFGRGKLVM 180

Query: 679 LRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGIFNTSNETKYEKENPPE 858
           LRTCNQLLRRLSKANDVVFCGRILMFLAH FPLSERSA+N+KG+FNTSN+TKYE+E PPE
Sbjct: 181 LRTCNQLLRRLSKANDVVFCGRILMFLAHVFPLSERSALNVKGVFNTSNQTKYEQE-PPE 239

Query: 859 GIATDFNFYKTLWSLQEYFSNPAPM 933
           GI+ DFNFYKT WSLQE+F NP  M
Sbjct: 240 GISVDFNFYKTFWSLQEHFCNPTSM 264


>ref|XP_004986033.1| PREDICTED: THO complex subunit 1-like [Setaria italica]
          Length = 638

 Score =  374 bits (960), Expect = e-101
 Identities = 187/246 (76%), Positives = 213/246 (86%)
 Frame = +1

Query: 190 PPQKLPVIVSSHADRDRVQDVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQLL 369
           PP      VSSH DRDR+  VFR ALS+   P TFA+Q +QEA+KPQK+TVLV +ENQ L
Sbjct: 26  PPSTAGSTVSSHTDRDRIIGVFRSALSRTEPPETFALQTVQEAIKPQKETVLVLEENQSL 85

Query: 370 ENGLRTLLQELVAGAVKAGLPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGGMI 549
           EN LRTLLQELV+ AV++G   MQYG+S+   ES+C LI RLLDIVLYLCE GHVEGGM+
Sbjct: 86  ENALRTLLQELVSSAVQSGKKIMQYGNSLDSGESNC-LITRLLDIVLYLCERGHVEGGMV 144

Query: 550 FQLLEDLTEMSTMKDCKEVFGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKANDV 729
           FQLLEDLTEMST+KDCK++FGYIES+QD+LGKQELFGRGKLVMLRTCNQLLRRLSKANDV
Sbjct: 145 FQLLEDLTEMSTIKDCKDIFGYIESQQDVLGKQELFGRGKLVMLRTCNQLLRRLSKANDV 204

Query: 730 VFCGRILMFLAHFFPLSERSAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSLQE 909
           VFCGRI+MFLAHFFPLSERSA+NIKG+FNTSN TKYEK+   +GI+ DFNFYKTLWSLQE
Sbjct: 205 VFCGRIIMFLAHFFPLSERSALNIKGVFNTSNVTKYEKD-ATDGISVDFNFYKTLWSLQE 263

Query: 910 YFSNPA 927
           +FSNPA
Sbjct: 264 HFSNPA 269


>ref|XP_006649251.1| PREDICTED: THO complex subunit 1-like [Oryza brachyantha]
          Length = 644

 Score =  372 bits (956), Expect = e-101
 Identities = 189/261 (72%), Positives = 215/261 (82%)
 Frame = +1

Query: 163 RPLRVQLNPPPQKLPVIVSSHADRDRVQDVFREALSKPGHPSTFAIQAMQEAVKPQKQTV 342
           RP     +  P      VSSH DRDR+  VFR+ALS+   P  FA+QA+QEA+KPQKQTV
Sbjct: 22  RPPASSSSSAPATAAAAVSSHTDRDRIIGVFRDALSRTESPEAFALQAVQEAIKPQKQTV 81

Query: 343 LVQDENQLLENGLRTLLQELVAGAVKAGLPAMQYGSSIAEDESSCGLIPRLLDIVLYLCE 522
           LV +ENQ LEN LR LLQEL + AV++G   MQYG+S+   ES+C  I RLLDIVLYLCE
Sbjct: 82  LVLEENQSLENALRALLQELASSAVQSGKRIMQYGNSLDNGESNCP-ITRLLDIVLYLCE 140

Query: 523 GGHVEGGMIFQLLEDLTEMSTMKDCKEVFGYIESKQDILGKQELFGRGKLVMLRTCNQLL 702
            GHVEGGM+FQLLEDLTEMST+KDCK+VFGYIESKQD+LGKQELFGRGKLVMLRTCNQLL
Sbjct: 141 RGHVEGGMVFQLLEDLTEMSTIKDCKDVFGYIESKQDVLGKQELFGRGKLVMLRTCNQLL 200

Query: 703 RRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGIFNTSNETKYEKENPPEGIATDFNF 882
           RRLSKANDVVFCGRI+MFLAHFFPLSERSA+NIKG+FNTSNETKYEK+   +GI+ DFNF
Sbjct: 201 RRLSKANDVVFCGRIIMFLAHFFPLSERSALNIKGVFNTSNETKYEKD-ATDGISVDFNF 259

Query: 883 YKTLWSLQEYFSNPAPMIVNV 945
           Y TLWSLQE+FSNPA    N+
Sbjct: 260 YNTLWSLQEHFSNPALTAANL 280


>ref|XP_002468664.1| hypothetical protein SORBIDRAFT_01g049910 [Sorghum bicolor]
           gi|241922518|gb|EER95662.1| hypothetical protein
           SORBIDRAFT_01g049910 [Sorghum bicolor]
          Length = 637

 Score =  371 bits (952), Expect = e-100
 Identities = 187/248 (75%), Positives = 215/248 (86%)
 Frame = +1

Query: 184 NPPPQKLPVIVSSHADRDRVQDVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQ 363
           +PPP      VSSHADRDR+  VFR ALS+   P TF++Q +QEA+KPQK+TVLV +ENQ
Sbjct: 26  SPPPT---AAVSSHADRDRIIGVFRSALSRNEPPETFSLQTVQEAIKPQKETVLVLEENQ 82

Query: 364 LLENGLRTLLQELVAGAVKAGLPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGG 543
            LEN LRTLLQELV+ AV++G   MQYG+S+   ES+C  I RLLDIVLYLCE GHVEGG
Sbjct: 83  SLENALRTLLQELVSSAVQSGKKIMQYGNSLDSGESNCP-ITRLLDIVLYLCERGHVEGG 141

Query: 544 MIFQLLEDLTEMSTMKDCKEVFGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKAN 723
           M+FQLLEDLTEMST+KDCK++FGYIES+QD+LGKQELFGRGKLVMLRTCNQLLRRLSKAN
Sbjct: 142 MVFQLLEDLTEMSTIKDCKDIFGYIESQQDVLGKQELFGRGKLVMLRTCNQLLRRLSKAN 201

Query: 724 DVVFCGRILMFLAHFFPLSERSAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSL 903
           DVVFCGRI+MFLAHFFPLSERSA+NIKG+FNTSN TKYEK+   +GI+ DFNFYKTLWSL
Sbjct: 202 DVVFCGRIIMFLAHFFPLSERSALNIKGVFNTSNVTKYEKD-AMDGISVDFNFYKTLWSL 260

Query: 904 QEYFSNPA 927
           QE+FSNPA
Sbjct: 261 QEHFSNPA 268


>ref|NP_001159168.1| hypothetical protein [Zea mays] gi|223942431|gb|ACN25299.1| unknown
           [Zea mays] gi|414864321|tpg|DAA42878.1| TPA:
           hypothetical protein ZEAMMB73_799316 [Zea mays]
          Length = 638

 Score =  370 bits (951), Expect = e-100
 Identities = 187/248 (75%), Positives = 215/248 (86%)
 Frame = +1

Query: 184 NPPPQKLPVIVSSHADRDRVQDVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQ 363
           +PPP      VSSHADRDR+  VFR ALS+   P TF++Q +QEA+KPQK+TVLV +ENQ
Sbjct: 26  SPPPT---AAVSSHADRDRIIGVFRSALSRNEPPETFSLQTVQEAIKPQKETVLVLEENQ 82

Query: 364 LLENGLRTLLQELVAGAVKAGLPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGG 543
            LEN LRTLLQELV+ AV++    MQYG+S+   ES+C LI RLLDIVLYLCE GHVEGG
Sbjct: 83  SLENALRTLLQELVSSAVQSDKKIMQYGNSLDSGESNC-LITRLLDIVLYLCERGHVEGG 141

Query: 544 MIFQLLEDLTEMSTMKDCKEVFGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKAN 723
           M+FQLLEDLTEMST+KDCK++FGYIES+QD+LGKQELFGRGKLVMLRTCNQLLRRLSKAN
Sbjct: 142 MVFQLLEDLTEMSTIKDCKDIFGYIESQQDVLGKQELFGRGKLVMLRTCNQLLRRLSKAN 201

Query: 724 DVVFCGRILMFLAHFFPLSERSAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSL 903
           DVVFCGRI+MFLAHFFPLSERSA+NIKG+FNTSN TKYEK+   +GI+ DFNFYKTLWSL
Sbjct: 202 DVVFCGRIIMFLAHFFPLSERSALNIKGVFNTSNVTKYEKD-AMDGISVDFNFYKTLWSL 260

Query: 904 QEYFSNPA 927
           QE+FSNPA
Sbjct: 261 QEHFSNPA 268


>dbj|BAK02227.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 470

 Score =  370 bits (949), Expect = e-100
 Identities = 185/246 (75%), Positives = 213/246 (86%)
 Frame = +1

Query: 205 PVIVSSHADRDRVQDVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQLLENGLR 384
           P  VSSHADRDR+  VFR ALS+   P  FA+QA+QEA+KPQKQTVLV +ENQ LEN LR
Sbjct: 30  PAAVSSHADRDRIIGVFRTALSRNEAPEAFALQAVQEAIKPQKQTVLVLEENQTLENALR 89

Query: 385 TLLQELVAGAVKAGLPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGGMIFQLLE 564
            LLQELV+ AV++G   MQYG+S+   E++C LI RLLDI+LYLCE GHVEGGM+FQLLE
Sbjct: 90  RLLQELVSSAVQSGKGIMQYGNSLDSGETNC-LITRLLDIMLYLCERGHVEGGMVFQLLE 148

Query: 565 DLTEMSTMKDCKEVFGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGR 744
           DLT+MST+KDCK+VFGYIESKQD+LGKQELFGRGKLVMLRTCNQLLRRLSK+NDVVFCGR
Sbjct: 149 DLTDMSTIKDCKDVFGYIESKQDVLGKQELFGRGKLVMLRTCNQLLRRLSKSNDVVFCGR 208

Query: 745 ILMFLAHFFPLSERSAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSLQEYFSNP 924
           I+MFLAHFFPLSERSA+NIKG+FNTSNETKYEK+   +GI+ DFNFY+TLWSLQE+F NP
Sbjct: 209 IIMFLAHFFPLSERSALNIKGVFNTSNETKYEKD-ATDGISVDFNFYQTLWSLQEHFRNP 267

Query: 925 APMIVN 942
           A    N
Sbjct: 268 ALTTTN 273


>ref|XP_003558999.1| PREDICTED: THO complex subunit 1-like [Brachypodium distachyon]
          Length = 630

 Score =  367 bits (942), Expect = 4e-99
 Identities = 187/254 (73%), Positives = 213/254 (83%), Gaps = 3/254 (1%)
 Frame = +1

Query: 190 PPQKLP---VIVSSHADRDRVQDVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDEN 360
           PP   P     VSSHADRDR+  VFR ALS+   P  FA+QA+QEA+KPQKQTVLV +EN
Sbjct: 23  PPTSSPSTLAAVSSHADRDRIIGVFRNALSRTESPEVFALQAVQEAIKPQKQTVLVLEEN 82

Query: 361 QLLENGLRTLLQELVAGAVKAGLPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEG 540
           Q LEN LR LLQELV+ AV++G   MQYG+S+   ES+C LI  LLDI+LYLCE GHVEG
Sbjct: 83  QSLENALRRLLQELVSSAVQSGKGIMQYGNSLDSGESNC-LITHLLDIMLYLCERGHVEG 141

Query: 541 GMIFQLLEDLTEMSTMKDCKEVFGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKA 720
           GM+FQLLEDLT+MST+KDCK+VFGYIESKQD+LGKQELFGRGKLVMLRTCNQLLRRLSK+
Sbjct: 142 GMVFQLLEDLTDMSTIKDCKDVFGYIESKQDVLGKQELFGRGKLVMLRTCNQLLRRLSKS 201

Query: 721 NDVVFCGRILMFLAHFFPLSERSAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWS 900
           NDVVFCGRI+MFLAHFFPLSERSA+NIKG+FNTSNETKYEK+    GI+ DFNFY+TLWS
Sbjct: 202 NDVVFCGRIIMFLAHFFPLSERSALNIKGVFNTSNETKYEKD-ATGGISVDFNFYQTLWS 260

Query: 901 LQEYFSNPAPMIVN 942
           LQE+F NPA    N
Sbjct: 261 LQEHFRNPALTTTN 274


>ref|XP_004307195.1| PREDICTED: THO complex subunit 1-like [Fragaria vesca subsp. vesca]
          Length = 611

 Score =  366 bits (940), Expect = 6e-99
 Identities = 182/231 (78%), Positives = 204/231 (88%)
 Frame = +1

Query: 247 DVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQLLENGLRTLLQELVAGAVKAG 426
           +VFR A+ +PG P TFA+Q +Q+ +KPQK T LVQDENQLLEN LRTLLQELV+ AV++G
Sbjct: 2   EVFRSAILQPGPPETFALQTVQQVIKPQKGTKLVQDENQLLENILRTLLQELVSSAVQSG 61

Query: 427 LPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGGMIFQLLEDLTEMSTMKDCKEV 606
              MQYG SI + E++ G IPRLLD+VLYLCE  HVEGGMIFQLLEDLTEMSTM++CK+V
Sbjct: 62  EQIMQYGQSIDDGEATRGHIPRLLDVVLYLCENEHVEGGMIFQLLEDLTEMSTMRNCKDV 121

Query: 607 FGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 786
           FGYIESKQDILGKQELF RGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER
Sbjct: 122 FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 181

Query: 787 SAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSLQEYFSNPAPMIV 939
           SAVNIKG+FNTSNETKYEK+  P+GI+ DFNFYKT WSLQEYF NPAP+ V
Sbjct: 182 SAVNIKGVFNTSNETKYEKD-APDGISIDFNFYKTFWSLQEYFCNPAPLTV 231


>ref|NP_001048715.1| Os03g0110400 [Oryza sativa Japonica Group]
           gi|108705792|gb|ABF93587.1| THO complex subunit 1,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113547186|dbj|BAF10629.1| Os03g0110400 [Oryza sativa
           Japonica Group] gi|218191944|gb|EEC74371.1| hypothetical
           protein OsI_09688 [Oryza sativa Indica Group]
          Length = 638

 Score =  362 bits (929), Expect = 1e-97
 Identities = 183/244 (75%), Positives = 210/244 (86%)
 Frame = +1

Query: 214 VSSHADRDRVQDVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQLLENGLRTLL 393
           VSSH DRDR+  VFR+ALS+   P  FA+QA+Q+A+KPQKQTVLV +ENQ LEN LR LL
Sbjct: 39  VSSHTDRDRIIGVFRDALSRTESPEAFALQAVQDAIKPQKQTVLVLEENQSLENALRKLL 98

Query: 394 QELVAGAVKAGLPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGGMIFQLLEDLT 573
           QEL + AV++G   MQYG +   +E++C  I RLLDIVLYLCE GHVEGGM+FQLLEDLT
Sbjct: 99  QELASSAVQSGKRIMQYGDN---EENNCP-ITRLLDIVLYLCERGHVEGGMVFQLLEDLT 154

Query: 574 EMSTMKDCKEVFGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRILM 753
           EMST+KDCK+VFGYIESKQD+LGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRI+M
Sbjct: 155 EMSTIKDCKDVFGYIESKQDVLGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRIIM 214

Query: 754 FLAHFFPLSERSAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSLQEYFSNPAPM 933
           FLAHFFPLSERSA+NIKG+FNTSNETKYEK+   +GI+ DFNFY TLWSLQE+FSNPA  
Sbjct: 215 FLAHFFPLSERSALNIKGVFNTSNETKYEKD-ATDGISVDFNFYNTLWSLQEHFSNPALT 273

Query: 934 IVNV 945
             N+
Sbjct: 274 AANL 277


>ref|XP_006465778.1| PREDICTED: THO complex subunit 1-like isoform X2 [Citrus sinensis]
          Length = 607

 Score =  360 bits (924), Expect = 4e-97
 Identities = 180/227 (79%), Positives = 197/227 (86%)
 Frame = +1

Query: 247 DVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQLLENGLRTLLQELVAGAVKAG 426
           +VFR A+ + G P  FA+Q +QE +KPQKQT L QDENQLLEN LRTLLQELV+ AV++G
Sbjct: 2   EVFRRAILQAGPPENFALQTVQEVIKPQKQTKLAQDENQLLENMLRTLLQELVSSAVQSG 61

Query: 427 LPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGGMIFQLLEDLTEMSTMKDCKEV 606
            P M YG SI + E+S   IPRLLDIVLYLCE  HVEGGMIFQLLEDLTEMSTMK+CK++
Sbjct: 62  EPIMHYGQSIDDGETSQAQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMKNCKDI 121

Query: 607 FGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 786
           FGYIESKQDILGK ELF RGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER
Sbjct: 122 FGYIESKQDILGKLELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 181

Query: 787 SAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSLQEYFSNPA 927
           SAVNIKG+FNTSNETKYEK+ PP+GI  DFNFYKT WSLQEYF NPA
Sbjct: 182 SAVNIKGVFNTSNETKYEKD-PPDGIPVDFNFYKTFWSLQEYFCNPA 227


>ref|XP_006465777.1| PREDICTED: THO complex subunit 1-like isoform X1 [Citrus sinensis]
          Length = 608

 Score =  360 bits (924), Expect = 4e-97
 Identities = 180/227 (79%), Positives = 197/227 (86%)
 Frame = +1

Query: 247 DVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQLLENGLRTLLQELVAGAVKAG 426
           +VFR A+ + G P  FA+Q +QE +KPQKQT L QDENQLLEN LRTLLQELV+ AV++G
Sbjct: 2   EVFRRAILQAGPPENFALQTVQEVIKPQKQTKLAQDENQLLENMLRTLLQELVSSAVQSG 61

Query: 427 LPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGGMIFQLLEDLTEMSTMKDCKEV 606
            P M YG SI + E+S   IPRLLDIVLYLCE  HVEGGMIFQLLEDLTEMSTMK+CK++
Sbjct: 62  EPIMHYGQSIDDGETSQAQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMKNCKDI 121

Query: 607 FGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 786
           FGYIESKQDILGK ELF RGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER
Sbjct: 122 FGYIESKQDILGKLELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 181

Query: 787 SAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSLQEYFSNPA 927
           SAVNIKG+FNTSNETKYEK+ PP+GI  DFNFYKT WSLQEYF NPA
Sbjct: 182 SAVNIKGVFNTSNETKYEKD-PPDGIPVDFNFYKTFWSLQEYFCNPA 227


>ref|XP_006432406.1| hypothetical protein CICLE_v10000631mg [Citrus clementina]
           gi|557534528|gb|ESR45646.1| hypothetical protein
           CICLE_v10000631mg [Citrus clementina]
          Length = 608

 Score =  359 bits (922), Expect = 7e-97
 Identities = 180/227 (79%), Positives = 196/227 (86%)
 Frame = +1

Query: 247 DVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQLLENGLRTLLQELVAGAVKAG 426
           +VFR A+   G P  FA+Q +QE +KPQKQT L QDENQLLEN LRTLLQELV+ AV++G
Sbjct: 2   EVFRRAILHAGPPENFALQTVQEVIKPQKQTKLAQDENQLLENMLRTLLQELVSSAVQSG 61

Query: 427 LPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGGMIFQLLEDLTEMSTMKDCKEV 606
            P M YG SI + E+S   IPRLLDIVLYLCE  HVEGGMIFQLLEDLTEMSTMK+CK++
Sbjct: 62  EPIMHYGQSIDDGETSQAQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMKNCKDI 121

Query: 607 FGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 786
           FGYIESKQDILGK ELF RGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER
Sbjct: 122 FGYIESKQDILGKLELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 181

Query: 787 SAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSLQEYFSNPA 927
           SAVNIKG+FNTSNETKYEK+ PP+GI  DFNFYKT WSLQEYF NPA
Sbjct: 182 SAVNIKGVFNTSNETKYEKD-PPDGIPVDFNFYKTFWSLQEYFCNPA 227


>ref|XP_006347676.1| PREDICTED: THO complex subunit 1-like [Solanum tuberosum]
          Length = 609

 Score =  357 bits (917), Expect = 3e-96
 Identities = 181/232 (78%), Positives = 203/232 (87%)
 Frame = +1

Query: 247 DVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQLLENGLRTLLQELVAGAVKAG 426
           D+FR+A+ + G P  FA+  +QEA+KPQKQT LVQDENQLLEN LR+LLQELVA AV++G
Sbjct: 2   DLFRQAILRQGPPEEFALLTVQEAIKPQKQTKLVQDENQLLENILRSLLQELVAAAVQSG 61

Query: 427 LPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGGMIFQLLEDLTEMSTMKDCKEV 606
              M+YG SI + ESS G IPRLLDIVLYLCE  HVEGGMIFQLLEDLTEMSTM++C++V
Sbjct: 62  QKVMKYGVSIVDGESSQGQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCEDV 121

Query: 607 FGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 786
           FGYIESKQDILGK ELF RGKLVMLRTCNQLLRRLSKANDVVFCGRI+MFLAHFFPLSER
Sbjct: 122 FGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSER 181

Query: 787 SAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSLQEYFSNPAPMIVN 942
           SAVNIKG+FNTSNETKYE E  PEGI+ DFNFY+TLWSLQEYF NP P ++N
Sbjct: 182 SAVNIKGVFNTSNETKYETE-VPEGISIDFNFYRTLWSLQEYFCNP-PSLIN 231


>ref|XP_002529986.1| nuclear matrix protein, putative [Ricinus communis]
           gi|223530509|gb|EEF32391.1| nuclear matrix protein,
           putative [Ricinus communis]
          Length = 608

 Score =  357 bits (916), Expect = 4e-96
 Identities = 178/227 (78%), Positives = 197/227 (86%)
 Frame = +1

Query: 253 FREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQLLENGLRTLLQELVAGAVKAGLP 432
           F+ A+ +PG P  FA+Q +QE +KPQ+QT L QDENQLLEN LRTLLQELVA AV +G  
Sbjct: 4   FKNAILQPGPPENFALQTVQEFIKPQRQTKLAQDENQLLENMLRTLLQELVASAVHSGEQ 63

Query: 433 AMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGGMIFQLLEDLTEMSTMKDCKEVFG 612
            M YG S+ E E S G IPRLLD+VL+LCE  HVEGGMIFQLLEDLTEMSTMK+C+++FG
Sbjct: 64  IMLYGQSVDEGEKSQGQIPRLLDVVLHLCEREHVEGGMIFQLLEDLTEMSTMKNCQDIFG 123

Query: 613 YIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSA 792
           YIESKQDILGKQELF RGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSA
Sbjct: 124 YIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSA 183

Query: 793 VNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSLQEYFSNPAPM 933
           VNIKG+FNTSNETKYEK+ PP GI+ DFNFYKTLWSLQE F NPAP+
Sbjct: 184 VNIKGVFNTSNETKYEKD-PPAGISVDFNFYKTLWSLQENFCNPAPL 229


>gb|EOY19641.1| Nuclear matrix protein-related isoform 4, partial [Theobroma cacao]
          Length = 423

 Score =  356 bits (914), Expect = 6e-96
 Identities = 175/231 (75%), Positives = 199/231 (86%)
 Frame = +1

Query: 241 VQDVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQLLENGLRTLLQELVAGAVK 420
           + + FR A+ +PG P TFA++ +QE +KPQKQT L QDENQLLEN LRTLLQELV+ +V 
Sbjct: 1   MMEAFRRAILQPGPPETFALKIVQEVIKPQKQTKLAQDENQLLENMLRTLLQELVSSSVP 60

Query: 421 AGLPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGGMIFQLLEDLTEMSTMKDCK 600
           +G   MQYG SI ++  + G+IPRLLD VLYLCE  HVEGGMIFQLLEDL EMSTM++CK
Sbjct: 61  SGEEIMQYGKSIDDESDTQGVIPRLLDFVLYLCEKEHVEGGMIFQLLEDLNEMSTMRNCK 120

Query: 601 EVFGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLS 780
           ++F YIESKQDILGKQELF RGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLS
Sbjct: 121 DIFRYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLS 180

Query: 781 ERSAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSLQEYFSNPAPM 933
           ERSAVNIKG+FNTSNETKYEK+ PPEGI+ DFNFYKT WSLQ+YF NPA +
Sbjct: 181 ERSAVNIKGVFNTSNETKYEKD-PPEGISVDFNFYKTFWSLQDYFCNPASL 230


>gb|EOY19638.1| Nuclear matrix protein-related isoform 1 [Theobroma cacao]
          Length = 602

 Score =  356 bits (914), Expect = 6e-96
 Identities = 175/231 (75%), Positives = 199/231 (86%)
 Frame = +1

Query: 241 VQDVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQLLENGLRTLLQELVAGAVK 420
           + + FR A+ +PG P TFA++ +QE +KPQKQT L QDENQLLEN LRTLLQELV+ +V 
Sbjct: 1   MMEAFRRAILQPGPPETFALKIVQEVIKPQKQTKLAQDENQLLENMLRTLLQELVSSSVP 60

Query: 421 AGLPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGGMIFQLLEDLTEMSTMKDCK 600
           +G   MQYG SI ++  + G+IPRLLD VLYLCE  HVEGGMIFQLLEDL EMSTM++CK
Sbjct: 61  SGEEIMQYGKSIDDESDTQGVIPRLLDFVLYLCEKEHVEGGMIFQLLEDLNEMSTMRNCK 120

Query: 601 EVFGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLS 780
           ++F YIESKQDILGKQELF RGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLS
Sbjct: 121 DIFRYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLS 180

Query: 781 ERSAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSLQEYFSNPAPM 933
           ERSAVNIKG+FNTSNETKYEK+ PPEGI+ DFNFYKT WSLQ+YF NPA +
Sbjct: 181 ERSAVNIKGVFNTSNETKYEKD-PPEGISVDFNFYKTFWSLQDYFCNPASL 230


>ref|XP_002264619.2| PREDICTED: THO complex subunit 1-like [Vitis vinifera]
          Length = 601

 Score =  356 bits (914), Expect = 6e-96
 Identities = 178/227 (78%), Positives = 200/227 (88%)
 Frame = +1

Query: 247 DVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQLLENGLRTLLQELVAGAVKAG 426
           ++F++AL KPG P +FA+Q +QEA+KPQKQT L QDENQLLEN LR LLQELV+ AV++G
Sbjct: 2   EIFKQALLKPGPPESFALQVVQEAIKPQKQTKLAQDENQLLENILRKLLQELVSCAVQSG 61

Query: 427 LPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGGMIFQLLEDLTEMSTMKDCKEV 606
              MQYG SI ++E+    IPRLLDIVLYLCE  HVEGGMIFQLLEDLTEMSTM++CK++
Sbjct: 62  EKIMQYGQSIDDEEAIQSQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKDI 121

Query: 607 FGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 786
           F YIESKQDILGKQELF RGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER
Sbjct: 122 FAYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 181

Query: 787 SAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSLQEYFSNPA 927
           SAVNIKG+FNTSNETKYEK+  PEGI+ DFNFYKT WSLQE+F NPA
Sbjct: 182 SAVNIKGVFNTSNETKYEKD-APEGISIDFNFYKTFWSLQEHFCNPA 227


>emb|CBI35079.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  356 bits (914), Expect = 6e-96
 Identities = 178/227 (78%), Positives = 200/227 (88%)
 Frame = +1

Query: 247 DVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQLLENGLRTLLQELVAGAVKAG 426
           ++F++AL KPG P +FA+Q +QEA+KPQKQT L QDENQLLEN LR LLQELV+ AV++G
Sbjct: 14  EIFKQALLKPGPPESFALQVVQEAIKPQKQTKLAQDENQLLENILRKLLQELVSCAVQSG 73

Query: 427 LPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGGMIFQLLEDLTEMSTMKDCKEV 606
              MQYG SI ++E+    IPRLLDIVLYLCE  HVEGGMIFQLLEDLTEMSTM++CK++
Sbjct: 74  EKIMQYGQSIDDEEAIQSQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKDI 133

Query: 607 FGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 786
           F YIESKQDILGKQELF RGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER
Sbjct: 134 FAYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 193

Query: 787 SAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSLQEYFSNPA 927
           SAVNIKG+FNTSNETKYEK+  PEGI+ DFNFYKT WSLQE+F NPA
Sbjct: 194 SAVNIKGVFNTSNETKYEKD-APEGISIDFNFYKTFWSLQEHFCNPA 239


>ref|XP_004230044.1| PREDICTED: THO complex subunit 1-like [Solanum lycopersicum]
          Length = 608

 Score =  356 bits (913), Expect = 8e-96
 Identities = 180/232 (77%), Positives = 203/232 (87%)
 Frame = +1

Query: 247 DVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQLLENGLRTLLQELVAGAVKAG 426
           D+FR+A+ + G P  FA+  +QEA+KPQKQT LVQDENQLLEN LR+LLQELVA AV++G
Sbjct: 2   DLFRQAILRQGPPEEFALLTVQEAIKPQKQTKLVQDENQLLENILRSLLQELVAAAVQSG 61

Query: 427 LPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGGMIFQLLEDLTEMSTMKDCKEV 606
              M+YG SI + ESS G IPRLLDIVLYLCE  HVEGGMIFQLLEDLTEMSTM++C++V
Sbjct: 62  QKLMKYGVSIVDGESSQGQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCEDV 121

Query: 607 FGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER 786
           FGYIESKQDILGK ELF RGKLVMLRTCNQLLRRLSKANDVVFCGRI+MFLAHFFPLSER
Sbjct: 122 FGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSER 181

Query: 787 SAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSLQEYFSNPAPMIVN 942
           SAVNIKG+FNTSNETKYE E  P+GI+ DFNFY+TLWSLQEYF NP P ++N
Sbjct: 182 SAVNIKGVFNTSNETKYETE-VPDGISIDFNFYRTLWSLQEYFCNP-PSLIN 231


>ref|XP_001753133.1| predicted protein [Physcomitrella patens]
           gi|162695832|gb|EDQ82174.1| predicted protein
           [Physcomitrella patens]
          Length = 566

 Score =  356 bits (913), Expect = 8e-96
 Identities = 180/242 (74%), Positives = 198/242 (81%)
 Frame = +1

Query: 208 VIVSSHADRDRVQDVFREALSKPGHPSTFAIQAMQEAVKPQKQTVLVQDENQLLENGLRT 387
           V  + HADR R+ +VFR A++KP   S  A+  M EAVKPQKQTVLVQDENQLLENGLRT
Sbjct: 7   VAAACHADRQRLLEVFRVAIAKPLPASQTAVATMVEAVKPQKQTVLVQDENQLLENGLRT 66

Query: 388 LLQELVAGAVKAGLPAMQYGSSIAEDESSCGLIPRLLDIVLYLCEGGHVEGGMIFQLLED 567
           LL+ELV  AV  G   MQYG +   ++   GL+ RLLDIVLYLCE G+VEGGMIFQLLED
Sbjct: 67  LLEELVGAAVANGKSVMQYGRAEGPEDDGNGLLTRLLDIVLYLCEKGNVEGGMIFQLLED 126

Query: 568 LTEMSTMKDCKEVFGYIESKQDILGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRI 747
           LTE+ST+KDCKEVFGYIE KQ+ LGK ELF RGKLVMLRTCNQLLRRLSK NDVVFCGRI
Sbjct: 127 LTEVSTIKDCKEVFGYIEGKQETLGKSELFSRGKLVMLRTCNQLLRRLSKTNDVVFCGRI 186

Query: 748 LMFLAHFFPLSERSAVNIKGIFNTSNETKYEKENPPEGIATDFNFYKTLWSLQEYFSNPA 927
           LMFLAHFFPLSERSAVNIKG+FNTSNETKYEKE P +  A DF FYKT WSLQEYFSNP 
Sbjct: 187 LMFLAHFFPLSERSAVNIKGVFNTSNETKYEKEPPGDSPAIDFTFYKTFWSLQEYFSNPT 246

Query: 928 PM 933
            +
Sbjct: 247 TL 248