BLASTX nr result
ID: Ephedra25_contig00018018
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00018018
(2248 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsi... 50 6e-09
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 48 2e-08
gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao] 44 5e-08
gb|EOY32548.1| Uncharacterized protein TCM_040529 [Theobroma cacao] 44 5e-08
ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665... 44 5e-08
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 46 7e-08
gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum] 44 9e-08
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 43 1e-07
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 43 1e-07
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 43 1e-07
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 43 1e-07
emb|CAN82285.1| hypothetical protein VITISV_039753 [Vitis vinifera] 48 1e-07
emb|CAN67418.1| hypothetical protein VITISV_005919 [Vitis vinifera] 47 1e-07
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 48 1e-07
emb|CAN66375.1| hypothetical protein VITISV_037549 [Vitis vinifera] 46 2e-07
gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsi... 42 2e-07
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera] 46 2e-07
emb|CAN70109.1| hypothetical protein VITISV_001696 [Vitis vinifera] 47 2e-07
gb|ABM55238.1| integrase [Beta vulgaris] 43 2e-07
gb|ABH08430.1| putative integrase [Beta vulgaris] 43 2e-07
>gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 822
Score = 49.7 bits (117), Expect(2) = 6e-09
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = -2
Query: 300 EETTKLCKQDSDFLWHYRLGHINNKYLKKIQNS---CNLKNINISDEKCDHCYRAKSTKL 130
EET + K ++ LWH RLGH + LK +Q+ L N+ + KC+ C +K ++
Sbjct: 146 EETAMVAKDEATELWHKRLGHTGHSNLKILQSKEMVTGLPKFNVEEGKCESCILSKHSRD 205
Query: 129 PFP 121
PFP
Sbjct: 206 PFP 208
Score = 39.7 bits (91), Expect(2) = 6e-09
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -1
Query: 103 QIDHCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
++ H D+CGPM+ + RY L FIDD T+M W
Sbjct: 220 ELIHSDVCGPMQNSSINGSRYILTFIDDATRMVW 253
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 48.1 bits (113), Expect(2) = 2e-08
Identities = 26/70 (37%), Positives = 35/70 (50%)
Frame = -2
Query: 318 YVLGELEETTKLCKQDSDFLWHYRLGHINNKYLKKIQNSCNLKNINISDEKCDHCYRAKS 139
+V + ++ L + LWH RLGH + LK I SCN+ + + C C AKS
Sbjct: 502 FVSSSYDRSSNLSLTTTTTLWHSRLGHPADNILKHILTSCNISHQCHKNNVCCACQFAKS 561
Query: 138 TKLPFPTIVS 109
KLPF VS
Sbjct: 562 HKLPFNVXVS 571
Score = 39.7 bits (91), Expect(2) = 2e-08
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 94 HCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
H DL GP + + RYF+LF+DDF++ +W
Sbjct: 581 HADLWGPXSIPSTTGARYFILFVDDFSRFSW 611
>gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
Length = 1318
Score = 43.5 bits (101), Expect(2) = 5e-08
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = -2
Query: 312 LGELEETTKLCKQDSDFLWHYRLGHINNKYLKKIQNSCNLKN----INISDEKCDHCYRA 145
L E C + LWH RLGHIN +++K + S NL N I ++ C+ C +
Sbjct: 441 LNEAGHMAYKCVSNEARLWHRRLGHINYQFIKNM-GSLNLVNDMPIITEVEKTCEVCLQG 499
Query: 144 KSTKLPFP 121
K ++ PFP
Sbjct: 500 KQSRHPFP 507
Score = 42.7 bits (99), Expect(2) = 5e-08
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = -1
Query: 103 QIDHCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
Q+ H D+CGP+ ++ +YF+LFIDDF++ W
Sbjct: 519 QLIHTDICGPIGTLSLNGNKYFILFIDDFSRFCW 552
>gb|EOY32548.1| Uncharacterized protein TCM_040529 [Theobroma cacao]
Length = 1266
Score = 43.5 bits (101), Expect(2) = 5e-08
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = -2
Query: 312 LGELEETTKLCKQDSDFLWHYRLGHINNKYLKKIQNSCNLKN----INISDEKCDHCYRA 145
L E C + LWH RLGHIN +++K + S NL N I ++ C+ C +
Sbjct: 441 LNEAGHMAYKCVSNEARLWHRRLGHINYQFIKNM-GSLNLVNDMPVITEVEKTCEVCLQG 499
Query: 144 KSTKLPFP 121
K ++ PFP
Sbjct: 500 KQSRHPFP 507
Score = 42.7 bits (99), Expect(2) = 5e-08
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = -1
Query: 103 QIDHCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
Q+ H D+CGP+ ++ +YF+LFIDDF++ W
Sbjct: 519 QLIHTDICGPIGTLSLNGNKYFILFIDDFSRFCW 552
>ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665857 [Glycine max]
Length = 678
Score = 44.3 bits (103), Expect(2) = 5e-08
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = -2
Query: 315 VLGELEETTKLCKQDSDFLWHYRLGHINNKYLKKIQNS---CNLKNINISDEKCDHCYRA 145
+ ++ + K C DS +LWH R GH+N L+++ +L +IN D+ C+ C
Sbjct: 366 IQNDVGKCLKACYTDSSWLWHLRFGHLNFDGLERLAKKEMVRDLPSINHPDQLCERCLIG 425
Query: 144 KSTKLPFP 121
K + FP
Sbjct: 426 KQFRKSFP 433
Score = 42.0 bits (97), Expect(2) = 5e-08
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = -1
Query: 103 QIDHCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
++ H D+CGP++ + K +YFLLFIDD+++ W
Sbjct: 445 ELIHTDVCGPIKPNSFGKNKYFLLFIDDYSRKTW 478
>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 46.2 bits (108), Expect(2) = 7e-08
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = -2
Query: 345 SAGQAEGNIYVLGELEETTKLCKQD---SDFLWHYRLGHINNKYLKKIQNSCNLK-NINI 178
+ G +YVL E + ++ +WH+RLGH N+K L+ +QNS ++ N +
Sbjct: 424 TTGPRRNGLYVLENQEFVALYSNRQCAATEEVWHHRLGHANSKALQHLQNSKAIQINKSR 483
Query: 177 SDEKCDHCYRAKSTKLPF 124
+ C+ C KS++LPF
Sbjct: 484 TSPVCEPCQMGKSSRLPF 501
Score = 39.7 bits (91), Expect(2) = 7e-08
Identities = 14/43 (32%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Frame = -1
Query: 124 SNNSLIKQID--HCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
S++ ++ +D HCDL GP V++ + +Y+ +F+DD+++ +W
Sbjct: 504 SDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSW 546
>gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum]
Length = 1140
Score = 44.3 bits (103), Expect(2) = 9e-08
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = -2
Query: 276 QDSDFLWHYRLGHINNKYLKKIQNS---CNLKNINISDEKCDHCYRAKSTKLPFP 121
QD ++WH RLG IN K LK +QN ++ +IN + C C K ++ PFP
Sbjct: 458 QDETYVWHKRLGQINFKSLKLMQNKDLVADMPSINETSNVCGVCQIGKLSQSPFP 512
Score = 41.2 bits (95), Expect(2) = 9e-08
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -1
Query: 103 QIDHCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
Q+ H D+CGPM + +YFLLFI+D T+ W
Sbjct: 524 QLIHTDVCGPMSTPSYNGSKYFLLFINDLTRFCW 557
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 43.1 bits (100), Expect(2) = 1e-07
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -1
Query: 103 QIDHCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
++ H D+CGP++ + K YFLLFIDDF++ W
Sbjct: 528 ELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTW 561
Score = 42.0 bits (97), Expect(2) = 1e-07
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Frame = -2
Query: 378 LRDMETTT*ESSAGQAEGNIYVLG---ELEETTKLCKQDSDFLWHYRLGHIN---NKYLK 217
+RD E+ + ++ ++VL ++ + K+C ++ +LWH R GH+N + L
Sbjct: 426 IRDQESNL-ITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 216 KIQNSCNLKNINISDEKCDHCYRAKSTKLPFP 121
+ + L IN ++ C+ C K K+ FP
Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFP 516
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 43.1 bits (100), Expect(2) = 1e-07
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -1
Query: 103 QIDHCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
++ H D+CGP++ + K YFLLFIDDF++ W
Sbjct: 528 ELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTW 561
Score = 42.0 bits (97), Expect(2) = 1e-07
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Frame = -2
Query: 378 LRDMETTT*ESSAGQAEGNIYVLG---ELEETTKLCKQDSDFLWHYRLGHIN---NKYLK 217
+RD E+ + ++ ++VL ++ + K+C ++ +LWH R GH+N + L
Sbjct: 426 IRDQESNL-ITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 216 KIQNSCNLKNINISDEKCDHCYRAKSTKLPFP 121
+ + L IN ++ C+ C K K+ FP
Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFP 516
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 43.1 bits (100), Expect(2) = 1e-07
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -1
Query: 103 QIDHCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
++ H D+CGP++ + K YFLLFIDDF++ W
Sbjct: 528 ELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTW 561
Score = 42.0 bits (97), Expect(2) = 1e-07
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Frame = -2
Query: 378 LRDMETTT*ESSAGQAEGNIYVLG---ELEETTKLCKQDSDFLWHYRLGHIN---NKYLK 217
+RD E+ + ++ ++VL ++ + K+C ++ +LWH R GH+N + L
Sbjct: 426 IRDQESNL-ITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 216 KIQNSCNLKNINISDEKCDHCYRAKSTKLPFP 121
+ + L IN ++ C+ C K K+ FP
Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFP 516
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 43.1 bits (100), Expect(2) = 1e-07
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -1
Query: 103 QIDHCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
++ H D+CGP++ + K YFLLFIDDF++ W
Sbjct: 528 ELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTW 561
Score = 42.0 bits (97), Expect(2) = 1e-07
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Frame = -2
Query: 378 LRDMETTT*ESSAGQAEGNIYVLG---ELEETTKLCKQDSDFLWHYRLGHIN---NKYLK 217
+RD E+ + ++ ++VL ++ + K+C ++ +LWH R GH+N + L
Sbjct: 426 IRDQESNL-ITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 216 KIQNSCNLKNINISDEKCDHCYRAKSTKLPFP 121
+ + L IN ++ C+ C K K+ FP
Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFP 516
>emb|CAN82285.1| hypothetical protein VITISV_039753 [Vitis vinifera]
Length = 1074
Score = 48.1 bits (113), Expect(2) = 1e-07
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = -2
Query: 279 KQDSDFLWHYRLGHINNKYLKKIQNSCNLKNINISDEKCDHCYRAKSTKLPFPTIVS 109
K+ +LWH RLGH + YLKK+ S K+ +IS +CD C AKS ++ FP I++
Sbjct: 263 KKSKIWLWHRRLGHASFGYLKKLSPSLFAKS-DISSFRCDICELAKSHRVSFPLILN 318
Score = 37.0 bits (84), Expect(2) = 1e-07
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1
Query: 94 HCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
H D+ GP +V T R+F+ FIDD T+M W
Sbjct: 328 HSDVWGPSKVPTLSGSRWFVTFIDDCTRMTW 358
>emb|CAN67418.1| hypothetical protein VITISV_005919 [Vitis vinifera]
Length = 960
Score = 46.6 bits (109), Expect(2) = 1e-07
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = -2
Query: 279 KQDSDFLWHYRLGHINNKYLKKIQNSCNLKNINISDEKCDHCYRAKSTKLPFPTIVS 109
K+ +LWH RLGH + YLKK+ S K+ +IS +CD C AKS ++ FP I++
Sbjct: 213 KKSKIWLWHRRLGHASFGYLKKLFPSLFAKS-DISGFRCDICELAKSHRVSFPLILN 268
Score = 38.5 bits (88), Expect(2) = 1e-07
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1
Query: 94 HCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
H D+ GP +V T R+F+ FIDD+T+M W
Sbjct: 278 HFDVWGPSKVPTLSGSRWFVTFIDDYTRMTW 308
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 47.8 bits (112), Expect(2) = 1e-07
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = -2
Query: 264 FLWHYRLGHINNKYLKKIQNSCNLKNINI-SDEKCDHCYRAKSTKLPF 124
FLWH RLGHIN K+++K+ + L + + S E C+ C K TK PF
Sbjct: 82 FLWHCRLGHINEKHIQKLHSDGLLNSFDYESYETCESCLLGKMTKAPF 129
Score = 37.0 bits (84), Expect(2) = 1e-07
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 94 HCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
H D+CGPM R +YF+ F DDF++ +
Sbjct: 144 HTDVCGPMSTSARGNYQYFITFTDDFSRYGY 174
>emb|CAN66375.1| hypothetical protein VITISV_037549 [Vitis vinifera]
Length = 1347
Score = 45.8 bits (107), Expect(2) = 2e-07
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = -2
Query: 279 KQDSDFLWHYRLGHINNKYLKKIQNSCNLKNINISDEKCDHCYRAKSTKLPFPTIVS 109
K+ +LWH RLGH + YLKK+ S K+ +IS +CD C AKS + FP I++
Sbjct: 196 KKSEIWLWHRRLGHASFGYLKKLFPSLFAKS-DISGFRCDICELAKSHRASFPLILN 251
Score = 38.5 bits (88), Expect(2) = 2e-07
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1
Query: 94 HCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
H D+ GP +V+T R+F+ FIDD T+M W
Sbjct: 261 HYDVWGPSKVLTLSDSRWFVTFIDDCTRMTW 291
>gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1347
Score = 42.4 bits (98), Expect(2) = 2e-07
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -1
Query: 103 QIDHCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
+I H D+CGPM+ + RY++LF+DD+T M W
Sbjct: 516 EIVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCW 549
Score = 42.0 bits (97), Expect(2) = 2e-07
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = -2
Query: 312 LGELEETTKLCKQDSDFLWHYRLGHINNKYLKKIQNS---CNLKNINISDEKCDHCYRAK 142
L +EE ++ WH RLGH++NK L+++Q+ L ++ E C C K
Sbjct: 438 LSSVEEEAMTANVQTEETWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKETCKACNLGK 497
Query: 141 STKLPFP 121
++ FP
Sbjct: 498 QSRKSFP 504
>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
Length = 1007
Score = 45.8 bits (107), Expect(2) = 2e-07
Identities = 24/51 (47%), Positives = 28/51 (54%)
Frame = -2
Query: 261 LWHYRLGHINNKYLKKIQNSCNLKNINISDEKCDHCYRAKSTKLPFPTIVS 109
LWH RLGH + LK I SCN+ + + C C AKS KLPF VS
Sbjct: 173 LWHSRLGHPADNILKHILTSCNISHQCHKNNVCCACQFAKSHKLPFNVSVS 223
Score = 38.5 bits (88), Expect(2) = 2e-07
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 94 HCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
H DL GP + + RYF+LF+DDF+ +W
Sbjct: 233 HADLWGPTSIPSTTGARYFILFVDDFSHFSW 263
>emb|CAN70109.1| hypothetical protein VITISV_001696 [Vitis vinifera]
Length = 920
Score = 47.4 bits (111), Expect(2) = 2e-07
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = -2
Query: 279 KQDSDFLWHYRLGHINNKYLKKIQNSCNLKNINISDEKCDHCYRAKSTKLPFPTIVS 109
K+ +LWH RLGH + YLKK+ S KN +IS +CD C AKS + FP I++
Sbjct: 111 KKSEIWLWHRRLGHASFGYLKKLFPSLFSKN-DISGFRCDICELAKSHRASFPLILN 166
Score = 37.0 bits (84), Expect(2) = 2e-07
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1
Query: 94 HCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
H D+ GP +V T R+F+ FIDD T+M W
Sbjct: 176 HSDVWGPSKVPTLSGSRWFVTFIDDCTRMTW 206
>gb|ABM55238.1| integrase [Beta vulgaris]
Length = 1516
Score = 43.1 bits (100), Expect(2) = 2e-07
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -1
Query: 103 QIDHCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
++ H DLCGPM + +R +RY L+ +DD+++ W
Sbjct: 750 ELIHIDLCGPMRIQSRSGKRYVLVIVDDYSRYTW 783
Score = 40.8 bits (94), Expect(2) = 2e-07
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Frame = -2
Query: 339 GQAEGNIYVLG-----ELEETTKLCKQDSDFLWHYRLGHINNKYLKKIQNS---CNLKNI 184
G +GN Y++ ++ T +D LWH RLGH + L+K+++ L +I
Sbjct: 657 GTRKGNTYIVDLDLVPQINLTCLSVIEDDSLLWHKRLGHASFSLLEKLRSKDLVLGLPSI 716
Query: 183 NIS-DEKCDHCYRAKSTKLPF--PTIVS*NK 100
D+ CD C R K + F TIVS K
Sbjct: 717 KFHIDQVCDACARGKQVRSSFKSKTIVSTTK 747
>gb|ABH08430.1| putative integrase [Beta vulgaris]
Length = 1516
Score = 43.1 bits (100), Expect(2) = 2e-07
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -1
Query: 103 QIDHCDLCGPMEVMTRKKQRYFLLFIDDFTKMNW 2
++ H DLCGPM + +R +RY L+ +DD+++ W
Sbjct: 750 ELIHIDLCGPMRIQSRSGKRYVLVIVDDYSRYTW 783
Score = 40.8 bits (94), Expect(2) = 2e-07
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Frame = -2
Query: 339 GQAEGNIYVLG-----ELEETTKLCKQDSDFLWHYRLGHINNKYLKKIQNS---CNLKNI 184
G +GN Y++ ++ T +D LWH RLGH + L+K+++ L +I
Sbjct: 657 GTRKGNTYIVDLDLVPQINLTCLSVIEDDSLLWHKRLGHASFSLLEKLRSKDLVLGLPSI 716
Query: 183 NIS-DEKCDHCYRAKSTKLPF--PTIVS*NK 100
D+ CD C R K + F TIVS K
Sbjct: 717 KFHIDQVCDACARGKQVRSSFKSKTIVSTTK 747