BLASTX nr result
ID: Ephedra25_contig00017916
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00017916
(1323 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr... 446 e-123
ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II su... 439 e-120
ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta... 438 e-120
ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [A... 438 e-120
ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ... 437 e-120
gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theob... 437 e-120
ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II su... 437 e-120
ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-... 436 e-119
ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, ... 436 e-119
ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, ... 435 e-119
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera] 432 e-118
gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus... 431 e-118
gb|AFK41039.1| unknown [Medicago truncatula] 431 e-118
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su... 431 e-118
gb|ADE77570.1| unknown [Picea sitchensis] 429 e-117
ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polype... 429 e-117
ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II su... 429 e-117
ref|XP_001765827.1| predicted protein [Physcomitrella patens] gi... 429 e-117
ref|XP_002983424.1| hypothetical protein SELMODRAFT_180179 [Sela... 427 e-117
ref|XP_006409557.1| hypothetical protein EUTSA_v10022739mg [Eutr... 426 e-116
>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 3-like [Citrus
sinensis] gi|557524889|gb|ESR36195.1| hypothetical
protein CICLE_v10028849mg [Citrus clementina]
Length = 319
Score = 446 bits (1148), Expect = e-123
Identities = 231/321 (71%), Positives = 265/321 (82%), Gaps = 8/321 (2%)
Frame = -2
Query: 1190 MSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANST 1011
M G S R P +KIRE+KD++ KFELRDTDASMANALRRV+++EVPTIAIDLVEIE NS+
Sbjct: 1 MDGASYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60
Query: 1010 VLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDV 831
VLNDEFIAHRLGLIPLTS+RAM MR SRDCD+CDGD QCE+CSVEF L +C ++Q LDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120
Query: 830 TTHDLKSEDSSGVVP--------YECPTDNRGILIVKLSKGQELKLRAIARKGIGKDHAK 675
T+ DL S D S VVP Y+ RGI+IVKL +GQEL+LRAIARKGIGKDHAK
Sbjct: 121 TSKDLYSSDHS-VVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 179
Query: 674 *SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAEAY 495
SPAATVTFMYEP+IHINE+LM+SLSLE+KQ V S PT+VF I + VYV DAEAY
Sbjct: 180 WSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDI-DPNTGQVYVVDAEAY 238
Query: 494 TYDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVVRL 315
TYD+EVIKKAEAMGKPGL+ I+AKEDSFIFTVESTGAIK S++VLNAIE+LK+KLD VRL
Sbjct: 239 TYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRL 298
Query: 314 SSDTQEDDEQFGDLGRHMVGG 252
S DT E D+QFG+LG HM GG
Sbjct: 299 SEDTVEADDQFGELGAHMRGG 319
>ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
[Solanum lycopersicum]
Length = 319
Score = 439 bits (1128), Expect = e-120
Identities = 224/321 (69%), Positives = 268/321 (83%), Gaps = 8/321 (2%)
Frame = -2
Query: 1190 MSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANST 1011
M GVS R P IK+RE+KD+FMKFELRDTDAS+ANALRR++++EVPTIAIDLVEIE NS+
Sbjct: 1 MEGVSYQRFPKIKVREVKDDFMKFELRDTDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60
Query: 1010 VLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDV 831
VLNDEFI+HRLGL+PLTS+RAM MR SRDCD+CDGD QCEYCSVEF L V+C ++Q LDV
Sbjct: 61 VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120
Query: 830 TTHDLKSEDSSGVVPYECP--------TDNRGILIVKLSKGQELKLRAIARKGIGKDHAK 675
T+ DL S D + VVP + T N+GI+IVKL +GQEL+LRAIARKGIGKDHAK
Sbjct: 121 TSKDLLSSDHT-VVPVDYSDASSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAK 179
Query: 674 *SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAEAY 495
SPAATVTFMYEP+I+INE++M+SL+LE+K +LV S PT+VF I E V V D EAY
Sbjct: 180 WSPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPE-NKQVIVVDPEAY 238
Query: 494 TYDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVVRL 315
TYD+EV+KKAEAMGKPG++ IHAKEDSFIFTVE+TGA+K S++VLNAIE+LK+KLD VRL
Sbjct: 239 TYDDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRL 298
Query: 314 SSDTQEDDEQFGDLGRHMVGG 252
S DT E D+QFG+LG HM GG
Sbjct: 299 SDDTVEADDQFGELGAHMRGG 319
>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 318
Score = 438 bits (1127), Expect = e-120
Identities = 229/320 (71%), Positives = 262/320 (81%), Gaps = 7/320 (2%)
Frame = -2
Query: 1190 MSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANST 1011
M G S R P IKIRE+KD++ KFELRDTDASMANALRRV+++EVPT+AIDLVEIE NS+
Sbjct: 1 MEGASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60
Query: 1010 VLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDV 831
VLNDEFIAHRLGLIPLTS+RAM MR SRDCD+CDGD QC+YCSVEF L +C +Q LDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDV 120
Query: 830 TTHDLKSEDSSGVVPYEC-------PTDNRGILIVKLSKGQELKLRAIARKGIGKDHAK* 672
T+ DL S D + VVP + ++ RGI+IVKL +GQEL+LRAIARKGIGKDHAK
Sbjct: 121 TSKDLYSSDHT-VVPVDFSDSSGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 671 SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAEAYT 492
SPAATVTFMYEP IHINE+LM+SLSLE+KQ V S PT+VF I + V V D EAYT
Sbjct: 180 SPAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDI-DPNTQQVVVVDPEAYT 238
Query: 491 YDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVVRLS 312
YDEEVIKKAE+MGKPGL+NI AKEDSFIFTVESTGAIK S++VLNAIEILK+KLD VRLS
Sbjct: 239 YDEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLS 298
Query: 311 SDTQEDDEQFGDLGRHMVGG 252
DT E D+QFG+LG HM GG
Sbjct: 299 EDTVEADDQFGELGAHMRGG 318
>ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda]
gi|548856809|gb|ERN14637.1| hypothetical protein
AMTR_s00038p00194050 [Amborella trichopoda]
Length = 324
Score = 438 bits (1126), Expect = e-120
Identities = 223/325 (68%), Positives = 271/325 (83%), Gaps = 12/325 (3%)
Frame = -2
Query: 1190 MSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANST 1011
M GVS R P +KIREMKD+++KFELR+TD SMANALRR++++EVPTIAIDLVEIEANS+
Sbjct: 1 MEGVSYQRFPKVKIREMKDDYLKFELRETDPSMANALRRIMLAEVPTIAIDLVEIEANSS 60
Query: 1010 VLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDV 831
VLNDEF+AHRLGLIPLTS++AM MR SRDCD+CDGD QCEYCSVEF+L V+C+++Q LDV
Sbjct: 61 VLNDEFLAHRLGLIPLTSEKAMSMRFSRDCDACDGDGQCEYCSVEFQLSVKCDSDQTLDV 120
Query: 830 TTHDLKSEDSSGVVPYEC-----------PTDNRGILIVKLSKGQELKLRAIARKGIGKD 684
T+ DL S D V+P + ++ RGI+IVKL +GQEL+LRAIARKGIGKD
Sbjct: 121 TSADLVSSDIH-VIPVDVAGRGMDSNGFDASEQRGIIIVKLRRGQELRLRAIARKGIGKD 179
Query: 683 HAK*SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNH-VYVYD 507
HAK SP ATVTFMYEP+IHIN++LM++LSL++K++ V S PTRVF I +P H V V D
Sbjct: 180 HAKWSPGATVTFMYEPEIHINDDLMETLSLDEKREWVESSPTRVFDI--DPNTHQVVVVD 237
Query: 506 AEAYTYDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLD 327
EAYTYD+EVIKKAEAMGKPGL+ I+A+EDSFIFTVESTGAIK S++V+NAIE+LK+KLD
Sbjct: 238 PEAYTYDDEVIKKAEAMGKPGLVEIYAREDSFIFTVESTGAIKASQLVINAIEVLKQKLD 297
Query: 326 VVRLSSDTQEDDEQFGDLGRHMVGG 252
VRLS DT+E DEQFG+LG HM GG
Sbjct: 298 AVRLSLDTEEGDEQFGELGAHMRGG 322
>ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
[Solanum tuberosum]
Length = 319
Score = 437 bits (1125), Expect = e-120
Identities = 224/321 (69%), Positives = 268/321 (83%), Gaps = 8/321 (2%)
Frame = -2
Query: 1190 MSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANST 1011
M GVS R P IKIRE+KD+FMKFELR+TDAS+ANALRR++++EVPTIAIDLVEIE NS+
Sbjct: 1 MEGVSYQRFPKIKIREVKDDFMKFELRETDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60
Query: 1010 VLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDV 831
VLNDEFI+HRLGL+PLTS+RAM MR SRDCD+CDGD QCEYCSVEF L V+C ++Q LDV
Sbjct: 61 VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120
Query: 830 TTHDLKSEDSSGVVPYECP--------TDNRGILIVKLSKGQELKLRAIARKGIGKDHAK 675
T+ DL S D + VVP + T N+GI+IVKL +GQEL+LRAIARKGIGKDHAK
Sbjct: 121 TSKDLLSSDHT-VVPVDYSDTSSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAK 179
Query: 674 *SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAEAY 495
SPAATVTFMYEP+I+INE++M+SL+LE+K +LV S PT+VF I E V V D EAY
Sbjct: 180 WSPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPE-NKQVIVVDPEAY 238
Query: 494 TYDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVVRL 315
TYD+EV+KKAEAMGKPG++ IHAKEDSFIFTVE+TGA+K S++VLNAIE+LK+KLD VRL
Sbjct: 239 TYDDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRL 298
Query: 314 SSDTQEDDEQFGDLGRHMVGG 252
S DT E D+QFG+LG HM GG
Sbjct: 299 SDDTVEADDQFGELGAHMRGG 319
>gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
Length = 318
Score = 437 bits (1124), Expect = e-120
Identities = 225/320 (70%), Positives = 264/320 (82%), Gaps = 7/320 (2%)
Frame = -2
Query: 1190 MSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANST 1011
M GVS R P +KIRE+KD++ KFELRDTDASMANALRRV+++EVPTIAIDLVEIE NS+
Sbjct: 1 MEGVSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60
Query: 1010 VLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDV 831
VLNDEFIAHRLGLIPLTS+RAM MR SRDCD+CDGD QCE+CSVEF L +C +Q LDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDV 120
Query: 830 TTHDLKSEDSSGVVPYEC-------PTDNRGILIVKLSKGQELKLRAIARKGIGKDHAK* 672
T+ DL S D + VVP + ++ RGI+IVKL +GQEL+LRAIARKGIGKDHAK
Sbjct: 121 TSKDLYSSDHT-VVPVDFTDSAGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 671 SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAEAYT 492
SPAATVTFMYEP+IHINE++M++L+LE+KQ V S PTRVF I + V V D EAYT
Sbjct: 180 SPAATVTFMYEPEIHINEDMMETLTLEEKQSFVESSPTRVFDI-DPNTQQVVVVDPEAYT 238
Query: 491 YDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVVRLS 312
YD+EV+KKAEAMGKPGL+ I+AKEDSFIFTVESTGAIK S++VLNAIE+LK+KLD VRLS
Sbjct: 239 YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLS 298
Query: 311 SDTQEDDEQFGDLGRHMVGG 252
DT E D+QFG+LG HM GG
Sbjct: 299 EDTVEADDQFGELGAHMRGG 318
>ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cicer
arietinum]
Length = 319
Score = 437 bits (1123), Expect = e-120
Identities = 228/321 (71%), Positives = 265/321 (82%), Gaps = 8/321 (2%)
Frame = -2
Query: 1190 MSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANST 1011
M G S RMP +KIRE+KD++MKFELRDTDAS+ANALRRV++SEVPTIAIDLVEIE NS+
Sbjct: 1 MEGASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTIAIDLVEIEVNSS 60
Query: 1010 VLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDV 831
VLNDEFIAHRLGLIPLTS+RAM MR SRDCD+CDGD QCEYCSVEF L V+C +Q LDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDV 120
Query: 830 TTHDLKSEDSSGVVPYEC--------PTDNRGILIVKLSKGQELKLRAIARKGIGKDHAK 675
T+ DL S D + VVP + +D RGI+IVKL +GQEL+LRAIARKGIGKDHAK
Sbjct: 121 TSKDLYSSDHT-VVPVDFSADPSSLESSDGRGIIIVKLRRGQELRLRAIARKGIGKDHAK 179
Query: 674 *SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAEAY 495
SPAATVTFMYEP IHINE+LM+SL+LE+K++ V S PTRVF I + V V D EAY
Sbjct: 180 WSPAATVTFMYEPDIHINEDLMESLTLEEKREWVDSSPTRVFDI-DPVTQQVMVVDPEAY 238
Query: 494 TYDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVVRL 315
+YD+EVIKKAEAMGKPGL+ I AK+DSFIFTVESTGA+K S+++LNAIEILK+KLD VRL
Sbjct: 239 SYDDEVIKKAEAMGKPGLVEITAKQDSFIFTVESTGAVKASQLLLNAIEILKQKLDAVRL 298
Query: 314 SSDTQEDDEQFGDLGRHMVGG 252
S DT E D+QFG+LG HM GG
Sbjct: 299 SEDTVEADDQFGELGAHMRGG 319
>ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula]
gi|85719360|gb|ABC75365.1| RNA polymerase, dimerisation
[Medicago truncatula] gi|355508950|gb|AES90092.1|
DNA-directed RNA polymerase II subunit RPB3-A [Medicago
truncatula]
Length = 318
Score = 436 bits (1121), Expect = e-119
Identities = 226/320 (70%), Positives = 265/320 (82%), Gaps = 7/320 (2%)
Frame = -2
Query: 1190 MSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANST 1011
M G S RMP +KIRE+KD++MKFELRDTDAS+ANALRRV++SEVPT+AIDLVEIE NS+
Sbjct: 1 MEGASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNSS 60
Query: 1010 VLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDV 831
VLNDEFIAHRLGLIPLTS+RAM MR SRDCD+CDGD QCEYCSVEF L V+C +Q LDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDV 120
Query: 830 TTHDLKSEDSSGVVPYECP-------TDNRGILIVKLSKGQELKLRAIARKGIGKDHAK* 672
++ DL S D + V P + P +D RGI+IVKL +GQEL+LRAIARKGIGKDHAK
Sbjct: 121 SSKDLISSDHT-VTPVDVPGGDASIESDGRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 671 SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAEAYT 492
SPAATVTFMYEP IHINE+LM+SL+LE+K++ V S PTRVF I + V V D EAY+
Sbjct: 180 SPAATVTFMYEPDIHINEDLMESLTLEEKKEWVDSSPTRVFDI-DPVTQQVMVVDPEAYS 238
Query: 491 YDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVVRLS 312
YD+EVIKKAEAMGKPGLI I AK+DSFIFTVESTGA+K S+++LN+IEILK+KLD VRLS
Sbjct: 239 YDDEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEILKQKLDAVRLS 298
Query: 311 SDTQEDDEQFGDLGRHMVGG 252
DT E D+QFG+LG HM GG
Sbjct: 299 EDTVEADDQFGELGAHMRGG 318
>ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
[Glycine max]
Length = 320
Score = 436 bits (1121), Expect = e-119
Identities = 224/318 (70%), Positives = 264/318 (83%), Gaps = 7/318 (2%)
Frame = -2
Query: 1184 GVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANSTVL 1005
GVS RMP +KIRE+KD++ KFELRDTDAS+ANALRRV+++EVPT+AIDLVEIE NS+VL
Sbjct: 4 GVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNSSVL 63
Query: 1004 NDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDVTT 825
NDEFIAHRLGLIPLTS+RAM MR SRDCD+CDGD QCE+CSVEF L V+C +Q LDVT+
Sbjct: 64 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDVTS 123
Query: 824 HDLKSEDS-------SGVVPYECPTDNRGILIVKLSKGQELKLRAIARKGIGKDHAK*SP 666
DL S D S + P +NRGI+IVKL +GQELKLRAIARKGIGKDHAK SP
Sbjct: 124 KDLYSSDPTVSPVDFSDPSATDSPDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSP 183
Query: 665 AATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAEAYTYD 486
AATVTFMYEP+IHINE+LM++L+LE+K++ V S PTRVF I + V V DAEAYTYD
Sbjct: 184 AATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEI-DPVTQQVMVVDAEAYTYD 242
Query: 485 EEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVVRLSSD 306
+EV+KKAEAMGKPGL+ I A++DSFIFTVESTGA+K S++VLNAIEILK+KLD VRLS D
Sbjct: 243 DEVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSED 302
Query: 305 TQEDDEQFGDLGRHMVGG 252
T E D+QFG+LG HM GG
Sbjct: 303 TVEADDQFGELGAHMRGG 320
>ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
[Glycine max]
Length = 319
Score = 435 bits (1118), Expect = e-119
Identities = 224/317 (70%), Positives = 266/317 (83%), Gaps = 6/317 (1%)
Frame = -2
Query: 1184 GVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANSTVL 1005
GVS RMP +KIRE+KD++ KFELRDTDAS+ANALRRV+++EVPT+AIDLVEIE NS+VL
Sbjct: 4 GVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNSSVL 63
Query: 1004 NDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDVTT 825
NDEFIAHRLGLIPLTS+RAM MR SRDCD+CDGD QCE+CSVEF L V+C +Q LDVT+
Sbjct: 64 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDVTS 123
Query: 824 HDLKSEDSS-GVVPYECPT-----DNRGILIVKLSKGQELKLRAIARKGIGKDHAK*SPA 663
DL S D + V + P+ +NRGI+IVKL +GQELKLRAIARKGIGKDHAK SPA
Sbjct: 124 KDLYSSDPTVSPVDFSDPSATDSDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSPA 183
Query: 662 ATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAEAYTYDE 483
ATVTFMYEP+IHINE+LM++L+LE+K++ V S PTRVF I + V V DAEAYTYD+
Sbjct: 184 ATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEI-DPVTQQVMVVDAEAYTYDD 242
Query: 482 EVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVVRLSSDT 303
EV+KKAEAMGKPGL+ I A++DSFIFTVESTGA+K S++VLNAIEILK+KLD VRLS DT
Sbjct: 243 EVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSEDT 302
Query: 302 QEDDEQFGDLGRHMVGG 252
E D+QFG+LG HM GG
Sbjct: 303 VEADDQFGELGAHMRGG 319
>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
Length = 318
Score = 432 bits (1111), Expect = e-118
Identities = 223/320 (69%), Positives = 263/320 (82%), Gaps = 7/320 (2%)
Frame = -2
Query: 1190 MSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANST 1011
M GVS R P IKIRE+KD++ KFELR+TDASMANALRRV+++EVPT+AIDLVEIE NS+
Sbjct: 1 MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60
Query: 1010 VLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDV 831
VLNDEFIAHRLGLIPLTS+RAM MR SRDCD+CDGD QCE+CSVEF L +C ++ LDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120
Query: 830 TTHDLKSEDSSGVVPYEC-------PTDNRGILIVKLSKGQELKLRAIARKGIGKDHAK* 672
T+ DL S D + VVP + D +GI+IVKL +GQEL+LRAIARKGIGKDHAK
Sbjct: 121 TSKDLISSDHT-VVPVDFSDSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 671 SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAEAYT 492
SPAATVTFMYEP+IHINE+LM+SL+LE+K V S PT+VF I + V V DAEAYT
Sbjct: 180 SPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDI-DASSQQVVVADAEAYT 238
Query: 491 YDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVVRLS 312
YD+EV+KKAEAMGKPGL+ I+AKEDSFIFTVESTGAIK S++VLNAI++LK+KLD VRLS
Sbjct: 239 YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLS 298
Query: 311 SDTQEDDEQFGDLGRHMVGG 252
DT E D+QFG+LG HM GG
Sbjct: 299 EDTVEADDQFGELGAHMRGG 318
>gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus vulgaris]
Length = 318
Score = 431 bits (1109), Expect = e-118
Identities = 222/320 (69%), Positives = 268/320 (83%), Gaps = 7/320 (2%)
Frame = -2
Query: 1190 MSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANST 1011
M G S RMP +KIRE+KD++ KFELRDTDAS+ANALRRV+++EVPTIAIDLVEIE NS+
Sbjct: 1 MEGASYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 60
Query: 1010 VLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDV 831
VLNDEFIAHRLGLIPLTS+RAM MR SRDCD+CDGD QCE+CSVEF L V+C +Q LDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDV 120
Query: 830 TTHDLKSEDSSGVVPYEC-------PTDNRGILIVKLSKGQELKLRAIARKGIGKDHAK* 672
++ DL S D S VVP + +++RG++IVKL +GQEL+LRAIARKGIGKDHAK
Sbjct: 121 SSKDLYSSDPS-VVPVDFSDPASTDSSESRGVIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 671 SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAEAYT 492
SPAATVTFMYEP+IH+NE+LM++L+LE+K++ V S PTRVF I + V V D+EAY+
Sbjct: 180 SPAATVTFMYEPEIHLNEDLMETLTLEEKREWVDSSPTRVFEI-DPVTQQVMVVDSEAYS 238
Query: 491 YDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVVRLS 312
YD+EVIKKAEAMGKPGL+ I A++DSFIFTVESTGAIK+S++VLNAIEILK+KLD VRLS
Sbjct: 239 YDDEVIKKAEAMGKPGLVEIIARQDSFIFTVESTGAIKSSQLVLNAIEILKQKLDAVRLS 298
Query: 311 SDTQEDDEQFGDLGRHMVGG 252
DT E D+QFG+LG HM GG
Sbjct: 299 EDTVEADDQFGELGAHMRGG 318
>gb|AFK41039.1| unknown [Medicago truncatula]
Length = 318
Score = 431 bits (1109), Expect = e-118
Identities = 225/320 (70%), Positives = 264/320 (82%), Gaps = 7/320 (2%)
Frame = -2
Query: 1190 MSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANST 1011
M G S RMP +KIRE+KD++MKFELRDTDAS+ANALRRV++SEVPT+AIDLVEIE NS+
Sbjct: 1 MEGASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNSS 60
Query: 1010 VLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDV 831
VLNDEFIAHRLGLIPLTS+RAM MR SRDCD+CDGD QCEYCSVEF L V+ +Q LDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKRITDQTLDV 120
Query: 830 TTHDLKSEDSSGVVPYECP-------TDNRGILIVKLSKGQELKLRAIARKGIGKDHAK* 672
++ DL S D + V P + P +D RGI+IVKL +GQEL+LRAIARKGIGKDHAK
Sbjct: 121 SSKDLISSDHT-VTPVDVPGGDASIESDGRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 671 SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAEAYT 492
SPAATVTFMYEP IHINE+LM+SL+LE+K++ V S PTRVF I + V V D EAY+
Sbjct: 180 SPAATVTFMYEPDIHINEDLMESLTLEEKKEWVDSSPTRVFDI-DPVTQQVMVVDPEAYS 238
Query: 491 YDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVVRLS 312
YD+EVIKKAEAMGKPGLI I AK+DSFIFTVESTGA+K S+++LN+IEILK+KLD VRLS
Sbjct: 239 YDDEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEILKQKLDAVRLS 298
Query: 311 SDTQEDDEQFGDLGRHMVGG 252
DT E D+QFG+LG HM GG
Sbjct: 299 EDTVEADDQFGELGAHMRGG 318
>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
vinifera]
Length = 318
Score = 431 bits (1109), Expect = e-118
Identities = 223/320 (69%), Positives = 263/320 (82%), Gaps = 7/320 (2%)
Frame = -2
Query: 1190 MSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANST 1011
M GVS R P IKIRE+KD++ KFELR+TDASMANALRRV+++EVPT+AIDLVEIE NS+
Sbjct: 1 MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60
Query: 1010 VLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDV 831
VLNDEFIAHRLGLIPLTS+RAM MR SRDCD+CDGD QCE+CSVEF L +C ++ LDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120
Query: 830 TTHDLKSEDSSGVVPYEC-------PTDNRGILIVKLSKGQELKLRAIARKGIGKDHAK* 672
T+ DL S D + VVP + D +GI+IVKL +GQEL+LRAIARKGIGKDHAK
Sbjct: 121 TSKDLISSDHT-VVPVDFSDSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 671 SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAEAYT 492
SPAATVTFMYEP+IHINE+LM+SL+LE+K V S PT+VF I + V V DAEAYT
Sbjct: 180 SPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDI-DASSQQVVVADAEAYT 238
Query: 491 YDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVVRLS 312
YD+EV+KKAEAMGKPGL+ I+AKEDSFIFTVESTGAIK S++VLNAI++LK+KLD VRLS
Sbjct: 239 YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLS 298
Query: 311 SDTQEDDEQFGDLGRHMVGG 252
DT E D+QFG+LG HM GG
Sbjct: 299 EDTVEADDQFGELGAHMRGG 318
>gb|ADE77570.1| unknown [Picea sitchensis]
Length = 330
Score = 429 bits (1104), Expect = e-117
Identities = 217/330 (65%), Positives = 270/330 (81%), Gaps = 10/330 (3%)
Frame = -2
Query: 1205 MEAEQMSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEI 1026
M+ + S R P +KIREMKD++MKFEL++TD S+ANALRRV++ EVPTIAIDLVEI
Sbjct: 1 MDGQGQMSSSYQRFPTVKIREMKDDYMKFELKNTDPSIANALRRVMIGEVPTIAIDLVEI 60
Query: 1025 EANSTVLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENE 846
E+NS+VLNDEF+AHRLGLIPL S+RAMDMR SRDCD+CDGD QC YCSVEF+L+V+C+ +
Sbjct: 61 ESNSSVLNDEFLAHRLGLIPLISERAMDMRFSRDCDTCDGDAQCHYCSVEFKLNVKCDGD 120
Query: 845 QCLDVTTHDLKSED--SSGVVPYECPTD--------NRGILIVKLSKGQELKLRAIARKG 696
Q LDVT+ DL S D + VV + D RGI+IVKL +GQEL+LRAIARKG
Sbjct: 121 QTLDVTSLDLVSSDMRENPVVAVDRAADMNVFDASEQRGIIIVKLRRGQELRLRAIARKG 180
Query: 695 IGKDHAK*SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVY 516
IGKDHAK SPAATVTFMYEP IHINENLM++L+L++K++ + SCPT+VF I + V+
Sbjct: 181 IGKDHAKWSPAATVTFMYEPDIHINENLMETLTLDEKREWIESCPTKVFDIHPD-TQQVF 239
Query: 515 VYDAEAYTYDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKK 336
V DAEAY+YD+EVIKKAEAMGKPGL++I+AK+DSFIFT+ESTGA+K S+M+LNAI+ILK+
Sbjct: 240 VVDAEAYSYDDEVIKKAEAMGKPGLVSINAKDDSFIFTIESTGALKASQMLLNAIDILKQ 299
Query: 335 KLDVVRLSSDTQEDDEQFGDLGRHMVGGDG 246
KL+ VRLS +T+EDD QF DL +HM GG G
Sbjct: 300 KLETVRLSPETEEDDAQFIDLEQHMRGGGG 329
>ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein
[Populus trichocarpa] gi|550331423|gb|EEE87820.2|
DNA-directed RNA polymerase II 36 kDa polypeptide B
family protein [Populus trichocarpa]
Length = 323
Score = 429 bits (1103), Expect = e-117
Identities = 225/324 (69%), Positives = 263/324 (81%), Gaps = 11/324 (3%)
Frame = -2
Query: 1190 MSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANST 1011
M VS R P IKIREMKD+++KFELR+TDASMANALRRV+++EVPTIAIDLVEIE NS+
Sbjct: 1 MESVSYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60
Query: 1010 VLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDV 831
VLNDEFIAHRLGLIPLTS+RAM MR SRDCD+CDGD QCEYCSVEF L +C +Q LDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 120
Query: 830 TTHDLKSEDSSGV-VPYECPTD----------NRGILIVKLSKGQELKLRAIARKGIGKD 684
T+ DL S D + + V + P+D RGI+IVKL +GQEL+LRAIARKGIGKD
Sbjct: 121 TSKDLYSSDHAVIPVDFSDPSDANDPFDHTETQRGIIIVKLRRGQELRLRAIARKGIGKD 180
Query: 683 HAK*SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDA 504
HAK SPAATVTFMYEP+IHINE+LM++L+LE+K + S PT+VF I ++ V V D
Sbjct: 181 HAKWSPAATVTFMYEPEIHINEDLMETLTLEEKLSWIESSPTKVFDI-DKVTQQVVVVDP 239
Query: 503 EAYTYDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDV 324
EAYTYD+EVIKKAEAMGK GLI+I AKEDSFIFTVESTGA+K S++VLNAIEILK+KLD
Sbjct: 240 EAYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAVKASQLVLNAIEILKQKLDA 299
Query: 323 VRLSSDTQEDDEQFGDLGRHMVGG 252
VRLS DT E D+QFG+LG HM GG
Sbjct: 300 VRLSDDTVEADDQFGELGVHMRGG 323
>ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
[Cucumis sativus]
Length = 320
Score = 429 bits (1102), Expect = e-117
Identities = 221/322 (68%), Positives = 263/322 (81%), Gaps = 9/322 (2%)
Frame = -2
Query: 1190 MSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANST 1011
M G S R P +KIRE++D++ KFELRDTDASMANALRRV+++EVPTIAIDLVEIE NS+
Sbjct: 1 MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60
Query: 1010 VLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDV 831
VLNDEFIAHRLGLIPLTS+RAM MR SRDCD+CDGD QCE+CSVEF L +C ++Q LDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120
Query: 830 TTHDLKSEDSSGVVPYEC---------PTDNRGILIVKLSKGQELKLRAIARKGIGKDHA 678
T+ DL S D + VVP + D +GI+IVKL +GQEL+LRAIARKGIGKDHA
Sbjct: 121 TSKDLYSSDHT-VVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHA 179
Query: 677 K*SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAEA 498
K SPAATVTFMYEP IHINE+LM++L+LE+K+ V SCPTRVF + + + V V D EA
Sbjct: 180 KWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFEL-DTVTHQVMVVDPEA 238
Query: 497 YTYDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVVR 318
YTYD+EVIKKAEAMGK GL++I A+EDSFIFTVESTGAIK S+++LNAI+ILK+KLD VR
Sbjct: 239 YTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVR 298
Query: 317 LSSDTQEDDEQFGDLGRHMVGG 252
LS DT E D+QFG+LG HM GG
Sbjct: 299 LSDDTVEADDQFGELGAHMRGG 320
>ref|XP_001765827.1| predicted protein [Physcomitrella patens] gi|162683004|gb|EDQ69418.1|
predicted protein [Physcomitrella patens]
Length = 324
Score = 429 bits (1102), Expect = e-117
Identities = 218/324 (67%), Positives = 262/324 (80%), Gaps = 11/324 (3%)
Frame = -2
Query: 1190 MSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANST 1011
M VS R P ++IR++KD+ +KFELRDTDAS+ANALRR++++EVPT+AIDLVEIE+NS+
Sbjct: 1 MDNVSYQRFPTVRIRDIKDDVLKFELRDTDASIANALRRIMIAEVPTLAIDLVEIESNSS 60
Query: 1010 VLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDV 831
VLNDEF+AHRLGLIP+ S RAM+MRLSRDCD+CDGD +CEYCS+EF L V+C +Q LDV
Sbjct: 61 VLNDEFLAHRLGLIPIVSDRAMEMRLSRDCDACDGDGRCEYCSIEFHLSVKCTGDQTLDV 120
Query: 830 TTHDLKSEDSSGVVPYEC-----------PTDNRGILIVKLSKGQELKLRAIARKGIGKD 684
T+ DL S D S ++P + D RGILIVKL KGQELKLRAIARKGIGKD
Sbjct: 121 TSLDLVSSDPS-IIPVDAAGRAADMGGFESNDTRGILIVKLRKGQELKLRAIARKGIGKD 179
Query: 683 HAK*SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDA 504
HAK SPAATVTF YEP+IHINE LM++L+LE+KQ+ + S PT+VF + + V V D
Sbjct: 180 HAKWSPAATVTFQYEPEIHINEALMETLTLEEKQEWIDSSPTKVFEL-DPVSQQVVVVDP 238
Query: 503 EAYTYDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDV 324
EAYTYDEEV+KKAEAMGKPGL+ I++KEDSFIFTVESTGAIK S+M LNAIEILK KLD
Sbjct: 239 EAYTYDEEVLKKAEAMGKPGLVEIYSKEDSFIFTVESTGAIKASQMFLNAIEILKSKLDA 298
Query: 323 VRLSSDTQEDDEQFGDLGRHMVGG 252
VRLS DT+E D+QFG+LG HM GG
Sbjct: 299 VRLSFDTEEADDQFGELGAHMRGG 322
>ref|XP_002983424.1| hypothetical protein SELMODRAFT_180179 [Selaginella moellendorffii]
gi|300149109|gb|EFJ15766.1| hypothetical protein
SELMODRAFT_180179 [Selaginella moellendorffii]
Length = 320
Score = 427 bits (1098), Expect = e-117
Identities = 221/318 (69%), Positives = 258/318 (81%), Gaps = 9/318 (2%)
Frame = -2
Query: 1178 SSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEANSTVLND 999
S R P ++IR++KD+F+KFELRDTDAS+ANALRRVI++EVPT+AIDLVEIEANS+VLND
Sbjct: 4 SYQRFPTVRIRDLKDDFLKFELRDTDASIANALRRVIIAEVPTLAIDLVEIEANSSVLND 63
Query: 998 EFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCLDVTTHD 819
EFIAHRLGLIPLTS +AM+MR SRDCD CDGD +C+YCS+EF L V+C +E+ LDVT+HD
Sbjct: 64 EFIAHRLGLIPLTSDKAMEMRYSRDCDECDGDGRCDYCSIEFTLSVKCTSEETLDVTSHD 123
Query: 818 LKSEDSSGVVP---------YECPTDNRGILIVKLSKGQELKLRAIARKGIGKDHAK*SP 666
L+S DS VVP E +GILIVKL KGQELKLRAIARKGI KDHAK SP
Sbjct: 124 LQSSDSQ-VVPVDSIGHDPDIENFNQKKGILIVKLRKGQELKLRAIARKGIAKDHAKWSP 182
Query: 665 AATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAEAYTYD 486
AATVTF YEP IHINENLM++LSLE+K++ V S PT+VF I E V V D EAYTYD
Sbjct: 183 AATVTFQYEPDIHINENLMETLSLEEKREWVDSSPTKVFEINPE-TQQVEVVDPEAYTYD 241
Query: 485 EEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVVRLSSD 306
+EVIKKAEAMGKPGL+ I+ KEDSFIFTVESTGAIK ++M LNAIEIL+ KLD V+L+
Sbjct: 242 DEVIKKAEAMGKPGLVEIYGKEDSFIFTVESTGAIKAAQMFLNAIEILRSKLDAVKLNFG 301
Query: 305 TQEDDEQFGDLGRHMVGG 252
+ E DEQFGDLG HM GG
Sbjct: 302 SDEADEQFGDLGAHMRGG 319
>ref|XP_006409557.1| hypothetical protein EUTSA_v10022739mg [Eutrema salsugineum]
gi|557110719|gb|ESQ51010.1| hypothetical protein
EUTSA_v10022739mg [Eutrema salsugineum]
Length = 369
Score = 426 bits (1095), Expect = e-116
Identities = 220/323 (68%), Positives = 261/323 (80%), Gaps = 8/323 (2%)
Frame = -2
Query: 1196 EQMSGVSSPRMPVIKIREMKDEFMKFELRDTDASMANALRRVIMSEVPTIAIDLVEIEAN 1017
E +G S R P +KIRE+KD++ KFELR+TD SMANALRRV++SEVPT+AIDLVEI+ N
Sbjct: 49 EMDTGASYQRFPKVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIDIN 108
Query: 1016 STVLNDEFIAHRLGLIPLTSQRAMDMRLSRDCDSCDGDTQCEYCSVEFRLDVRCENEQCL 837
S+VLNDEFIAHRLGLIPLTS+RAM MRLSRDCDSCDGD QCE+CSVEFRL +C +Q L
Sbjct: 109 SSVLNDEFIAHRLGLIPLTSERAMSMRLSRDCDSCDGDGQCEFCSVEFRLQAKCVTDQTL 168
Query: 836 DVTTHDLKSEDSSGVVPYECPTDN--------RGILIVKLSKGQELKLRAIARKGIGKDH 681
DVT+ DL S D + V P + D+ RGI+IVKL +GQELKLRAIARKGIGKDH
Sbjct: 169 DVTSRDLYSTDPT-VTPVDFTLDSSGTDSSEQRGIIIVKLRRGQELKLRAIARKGIGKDH 227
Query: 680 AK*SPAATVTFMYEPQIHINENLMQSLSLEDKQDLVASCPTRVFSITEEPPNHVYVYDAE 501
AK SPA+TVTFMYEP I+INE++M +L+ ++K DL+ S PT+VF I + V V D E
Sbjct: 228 AKWSPASTVTFMYEPDININEDMMDTLTEDEKIDLIESSPTKVFGI-DPVTRQVVVVDPE 286
Query: 500 AYTYDEEVIKKAEAMGKPGLINIHAKEDSFIFTVESTGAIKTSEMVLNAIEILKKKLDVV 321
AYTYDEEVIKKAEAMGKPGLI IH K+DSFIFTVESTGA+K S++VLNAI+ILK+KLD V
Sbjct: 287 AYTYDEEVIKKAEAMGKPGLIEIHPKDDSFIFTVESTGAVKASQLVLNAIDILKQKLDAV 346
Query: 320 RLSSDTQEDDEQFGDLGRHMVGG 252
RLS DT E D+QFG+LG H+ GG
Sbjct: 347 RLSDDTVEADDQFGELGAHLRGG 369