BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00017639
         (2378 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containi...   501   e-139
ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi...   498   e-138
ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutr...   494   e-137
ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Caps...   489   e-135
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar...   488   e-135
gb|EMJ16220.1| hypothetical protein PRUPE_ppa003340mg [Prunus pe...   487   e-135
ref|XP_002870737.1| pentatricopeptide repeat-containing protein ...   486   e-134
gb|EOY03346.1| Tetratricopeptide repeat (TPR)-like superfamily p...   484   e-134
ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Popu...   484   e-134
ref|XP_002517447.1| pentatricopeptide repeat-containing protein,...   483   e-133
ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containi...   481   e-133
ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containi...   480   e-132
ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containi...   480   e-132
gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis]     480   e-132
ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citr...   480   e-132
gb|ESW35832.1| hypothetical protein PHAVU_001G268500g [Phaseolus...   478   e-132
ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containi...   477   e-131
ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containi...   477   e-131
ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containi...   466   e-128
dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]           466   e-128

>ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Cucumis sativus]
            gi|449530101|ref|XP_004172035.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Cucumis sativus]
          Length = 680

 Score =  501 bits (1290), Expect = e-139
 Identities = 252/577 (43%), Positives = 378/577 (65%), Gaps = 1/577 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            EL+AS+    +E E+Y ++  +KG+ L ++ MV  L+ E DWQR+LA+ DW+ E   Y+P
Sbjct: 98   ELLASIGQTKNEQELYSVLSPYKGRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTP 157

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S+Y YNV+L  VLRAKQW+LA GL  EM  + +A DRYT+ T IT + ++     AL WL
Sbjct: 158  SVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWL 217

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             KME   VS D   Y+ +I L+ +  +YSKAIS+F+RLK   +  PDI  YNTM++++G 
Sbjct: 218  QKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGI-TPDIVAYNTMINVFGK 276

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +AR L  EM+   + PD  SY  LL  +V N +F E L+V  EMK  +  LDL  
Sbjct: 277  AKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTT 336

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L MV EA+ +F  M+K G+ PN+ +YNT+LR+Y EA +FGEAI LF  +Q
Sbjct: 337  CNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 396

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
            ++            IKI+ K L++EKA +L+Q+MQ + I  N+ITYST+IS++GKAGK  
Sbjct: 397  RKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLD 456

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLA 1719
             +  +FQ+ RS+  ++D+ LY +MI+ Y +AGL+GHA RLL EL Q  ++   TAI +LA
Sbjct: 457  RSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRTTAITILA 516

Query: 1720 KAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPT 1899
            KAG++EEATW+F +    GE++D  +FE M+DLF++   H N+L+V++  R  G  P+  
Sbjct: 517  KAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSD 576

Query: 1900 MLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKL 2079
            ++  +  AY KL+ +D A +LY E++ +G +  ++VHFQ++ +Y  + D + + +LFE+L
Sbjct: 577  VIALVLNAYGKLRDFDTADALYMEMQEEGCVFTDEVHFQMLSLYGARNDYKRLESLFERL 636

Query: 2080 ELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIER 2190
            + D NI+K+ L+L ++ IY + NR  DA RI + + +
Sbjct: 637  DSDPNINKKELHLVVASIYERGNRSKDASRIINRMNK 673



 Score = 84.7 bits (208), Expect = 2e-13
 Identities = 70/325 (21%), Positives = 127/325 (39%), Gaps = 1/325 (0%)
 Frame = +1

Query: 610  WMIERGGYSPSIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQ 789
            W + + G  P++  YN IL     A+ +  A  L + M  K +  +  T+ T I  Y + 
Sbjct: 358  WRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKT 417

Query: 790  AKLHLALQWLHKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFI 969
             +   A   +  M+   +  +  TY+TII + G+     ++  LF +L++      D  +
Sbjct: 418  LEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGA-EIDQVL 476

Query: 970  YNTMVDIYGSAGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMK 1149
            Y TM+  Y  AGL   A+ L  E+K     PD       +    +     E   V+++  
Sbjct: 477  YQTMIVAYEKAGLVGHAKRLLHELKQ----PDNIPRTTAITILAKAGRIEEATWVFRQAF 532

Query: 1150 SFSFYLDLPACNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFG 1329
                  D+     +I             EVF  M+  G  PN      +L  Y +   F 
Sbjct: 533  DAGELKDISVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLNAYGKLRDFD 592

Query: 1330 EAILLFARIQKRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEM-QDKNIRANSITYSTL 1506
             A  L+  +Q+             + ++    DY++  SL + +  D NI    + +  +
Sbjct: 593  TADALYMEMQEEGCVFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKEL-HLVV 651

Query: 1507 ISMYGKAGKHKEAEEMFQRFRSTKV 1581
             S+Y +  + K+A  +  R     +
Sbjct: 652  ASIYERGNRSKDASRIINRMNKIAI 676


>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic [Vitis vinifera]
            gi|296087770|emb|CBI35026.3| unnamed protein product
            [Vitis vinifera]
          Length = 675

 Score =  498 bits (1282), Expect = e-138
 Identities = 249/578 (43%), Positives = 378/578 (65%), Gaps = 1/578 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            EL+AS+   S+E E+Y LM  +KG+ L ++ MV  L+ E DWQR+LAL DW+ E   YSP
Sbjct: 94   ELLASISQTSNEQELYSLMSPYKGRQLSIRFMVSLLSREPDWQRSLALLDWINEEASYSP 153

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S++ YNV++  VLRAKQW+LA GL +EM  + +A DRYT+ T IT + ++     AL WL
Sbjct: 154  SVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALSWL 213

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             KME   VS D   Y+ +I L+ +  +YSKAIS+F+RLK   +  PD+  YN+M++++G 
Sbjct: 214  QKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGI-SPDLVAYNSMINVFGK 272

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +AR L  EM+   + PD  SY  LL  YV N ++ E L+V+ EM      LDL  
Sbjct: 273  AKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTT 332

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L M  EA+ +F  M+K G+ P I +YNT+LR+Y EA +FGEAI LF  +Q
Sbjct: 333  CNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQ 392

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
            ++            IKI+ K+L++EKA +L+QEMQ++ I  N+ITYST+IS++ KAGK  
Sbjct: 393  RKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLD 452

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLA 1719
             A  +FQ+ RS+ +++D+ LY +MI+ Y RAGL+ HA RLL EL +  ++   TAI +LA
Sbjct: 453  RAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILA 512

Query: 1720 KAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPT 1899
             AG++EEATW+F +    GE++D  +F  M+DLF++   H N+++V+   R AG  P   
Sbjct: 513  GAGRIEEATWVFRQAFDAGEVKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSN 572

Query: 1900 MLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKL 2079
            ++  +  A  KL+ +++A ++Y+E+E +G +  ++VHFQ++ +Y  +GD + V +LFE+L
Sbjct: 573  VIALVLNACGKLREFEKADAIYKEMEEEGCVFSDEVHFQMLSLYGARGDFQMVDSLFERL 632

Query: 2080 ELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERR 2193
            + D NI+K+ L+L ++ IY + NR +DA +I + +  R
Sbjct: 633  DSDPNINKKELHLVVASIYERANRLNDASQIMNRMRER 670



 Score = 91.7 bits (226), Expect = 1e-15
 Identities = 65/288 (22%), Positives = 128/288 (44%)
 Frame = +1

Query: 613  MIERGGYSPSIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQA 792
            +++R     ++  YN ++    ++ + + A  L +EM N+G+  +  T+ T I+ + +  
Sbjct: 390  LMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAG 449

Query: 793  KLHLALQWLHKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIY 972
            KL  A     K+  + + ID   Y T+I+   R    + A  L   LK     RPD    
Sbjct: 450  KLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELK-----RPDNIPR 504

Query: 973  NTMVDIYGSAGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKS 1152
             T + I   AG  ++A  +F +        D T +  ++  + RNR+ T V+ V+ +M+ 
Sbjct: 505  ETAITILAGAGRIEEATWVFRQAFDAGEVKDITVFGCMIDLFSRNRKHTNVIEVFDKMRG 564

Query: 1153 FSFYLDLPACNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGE 1332
              ++ D      ++ ACG L    +A+ ++ +M+++G   + + +  ML LY     F  
Sbjct: 565  AGYFPDSNVIALVLNACGKLREFEKADAIYKEMEEEGCVFSDEVHFQMLSLYGARGDFQM 624

Query: 1333 AILLFARIQKRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNI 1476
               LF R+                 I+ +A     A+ ++  M+++ I
Sbjct: 625  VDSLFERLDSDPNINKKELHLVVASIYERANRLNDASQIMNRMRERGI 672


>ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutrema salsugineum]
            gi|557106704|gb|ESQ47019.1| hypothetical protein
            EUTSA_v10028245mg [Eutrema salsugineum]
          Length = 683

 Score =  494 bits (1271), Expect = e-137
 Identities = 245/578 (42%), Positives = 378/578 (65%), Gaps = 1/578 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            +L+AS+    +E E++ L+  +K + L ++ MV  L+ EKDWQR+LAL DW+ E   Y+P
Sbjct: 99   DLLASIHQTQNEQELFSLLSSYKDRQLSIRFMVSLLSREKDWQRSLALLDWVHEEAKYTP 158

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S++ YNV+L  VLRAKQ+D+A GL  EM  + +A DRYT+ T IT++ ++     AL WL
Sbjct: 159  SVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWL 218

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             KME   VS D   Y+ +I L+ R  +YSKAIS+F+RLK   +  PD+  YN+M+++YG 
Sbjct: 219  QKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGI-TPDLVAYNSMINVYGK 277

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +AR L  EMK   + P+  SY  LL  YV N++F E L+V+ EMK  +  LDL  
Sbjct: 278  AKLFREARLLIKEMKEAGVEPNTVSYSTLLSVYVENQKFLEALSVFAEMKEVNCPLDLTT 337

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L MV EA+ +F  M+K  + PN+ +YNT+LR+Y EA + GEAI LF  +Q
Sbjct: 338  CNVMIDVYGQLDMVKEADRLFWSMRKMDIEPNVVSYNTILRVYGEADLIGEAIHLFRLMQ 397

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
            ++            IK++ K L++EKA +L+QEMQ + I  N+ITYST+IS++GKAGK  
Sbjct: 398  RKDIEQNVVTYNTMIKMYGKTLEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD 457

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLA 1719
             A  +FQ+ R + V++D+ LY +MI+ Y R GL+GHA RLL EL Q  ++   TAI +LA
Sbjct: 458  RAATLFQKLRRSGVEIDQVLYQTMIVAYERVGLMGHAKRLLQELKQPDNIPRETAITILA 517

Query: 1720 KAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPT 1899
            KAG++EEATW+F +    GE++D  +F  M+ L+++   + N+++V++  R AG  P   
Sbjct: 518  KAGRIEEATWVFRQAFESGEVKDITVFGCMISLYSRNQRYVNVIEVFEKMRSAGYFPDSN 577

Query: 1900 MLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKL 2079
             +  +  AY K + +++A ++YRE++ +G + P++VHFQ++ +Y+ K D E V +LFE+L
Sbjct: 578  AIAIVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFERL 637

Query: 2080 ELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERR 2193
            E D N++ + L+L ++ +Y + +R +DA R+ + +  R
Sbjct: 638  ESDPNVNSKELHLVVAALYERADRLNDASRVMNRMRER 675



 Score = 98.6 bits (244), Expect = 1e-17
 Identities = 70/332 (21%), Positives = 144/332 (43%)
 Frame = +1

Query: 700  AEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWLHKMEMADVSIDFFTYTTIIL 879
            A+ L   M    +  +  ++ T +  Y     +  A+     M+  D+  +  TY T+I 
Sbjct: 354  ADRLFWSMRKMDIEPNVVSYNTILRVYGEADLIGEAIHLFRLMQRKDIEQNVVTYNTMIK 413

Query: 880  LAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGSAGLFDDARSLFVEMKTYCIG 1059
            + G+   + KA +L   +++  +  P+   Y+T++ I+G AG  D A +LF +++   + 
Sbjct: 414  MYGKTLEHEKATNLVQEMQSRGI-EPNAITYSTIISIWGKAGKLDRAATLFQKLRRSGVE 472

Query: 1060 PDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPACNAIIKACGHLGMVIEAEEV 1239
             D   Y+ ++V+Y R         + +E+K         A   + KA    G + EA  V
Sbjct: 473  IDQVLYQTMIVAYERVGLMGHAKRLLQELKQPDNIPRETAITILAKA----GRIEEATWV 528

Query: 1240 FHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQKRXXXXXXXXXXXXIKIFSK 1419
            F    + G   +I  +  M+ LY     +   I +F +++              +  + K
Sbjct: 529  FRQAFESGEVKDITVFGCMISLYSRNQRYVNVIEVFEKMRSAGYFPDSNAIAIVLNAYGK 588

Query: 1420 ALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHKEAEEMFQRFRSTKVKMDEAL 1599
              ++EKA ++ +EMQ++        +  ++S+Y      +  E +F+R  S      + L
Sbjct: 589  QREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFERLESDPNVNSKEL 648

Query: 1600 YYSMILIYVRAGLIGHANRLLLELNQSKDLLP 1695
            +  +  +Y RA  +  A+R++  + +   L P
Sbjct: 649  HLVVAALYERADRLNDASRVMNRMRERGILKP 680


>ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Capsella rubella]
            gi|482554761|gb|EOA18954.1| hypothetical protein
            CARUB_v10007588mg [Capsella rubella]
          Length = 679

 Score =  489 bits (1259), Expect = e-135
 Identities = 243/578 (42%), Positives = 378/578 (65%), Gaps = 1/578 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWK-GKLGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            EL+AS+    +E E++ L+  +K G+L ++ MV  L+ E DWQR+LAL DW+ E   Y+P
Sbjct: 96   ELLASIHQTQNEKELFSLLSSYKDGQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTP 155

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S+Y YNV+L  VLRAKQ+D+A GL  EM  + +A DRYT+ T IT++ ++     AL WL
Sbjct: 156  SVYAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWL 215

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             KME   VS D   Y+ +I L+ R  +YSKAIS+F+RLK   +  PD+  YN+M+++YG 
Sbjct: 216  QKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGI-TPDLVAYNSMINVYGK 274

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +AR L  EM    + P+  SY  LL  YV N++F E L+V+ EMK  +  LDL  
Sbjct: 275  AKLFREARLLIKEMTEAGVLPNTVSYSTLLSVYVENQKFLEALSVFAEMKEVNCPLDLTT 334

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L MV EA+ +F  ++K  + PN+ +YNT+LR+Y EA +FGEAI LF  +Q
Sbjct: 335  CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 394

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
            ++            IKI+ K +++EKA +L++EMQ + I  N+ITYST+IS++GKAGK  
Sbjct: 395  RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVREMQSRGIEPNAITYSTIISIWGKAGKLD 454

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLA 1719
             A  +FQ+ RS+ V++D+ LY +MI+ Y R GL+GHA RLL EL    ++   TAI +LA
Sbjct: 455  RAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILA 514

Query: 1720 KAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPT 1899
            KAG+ EEATW+F +    GE++D  +F  M++L+++   + N+++V++  R AG  P   
Sbjct: 515  KAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSN 574

Query: 1900 MLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKL 2079
             +  +  AY K + +++A ++YRE++ +G + P++VHFQ++ +Y+ K D E V TLF++L
Sbjct: 575  AIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVETLFQRL 634

Query: 2080 ELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERR 2193
            E + N++ + L+L ++ +Y + ++ +DA R+ + +  R
Sbjct: 635  ESEPNVNSKELHLVVAALYERADKLNDASRVMNRMRER 672



 Score =  103 bits (256), Expect = 4e-19
 Identities = 86/438 (19%), Positives = 180/438 (41%), Gaps = 66/438 (15%)
 Frame = +1

Query: 580  DWQRALALHDWMIERGGYSPSIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTF 759
            D+ +A+++    +++ G +P +  YN ++    +AK +  A  L KEM+  GV  +  ++
Sbjct: 242  DYSKAISIFS-RLKKSGITPDLVAYNSMINVYGKAKLFREARLLIKEMTEAGVLPNTVSY 300

Query: 760  CTFITAYARQAKLHLALQWLHKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKT 939
             T ++ Y    K   AL    +M+  +  +D  T   +I + G+     +A  LF  L+ 
Sbjct: 301  STLLSVYVENQKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 360

Query: 940  MDVWRPDIFIYNTMVDIYGSAGLFDDARSLFV---------------------------- 1035
            MD+  P++  YNT++ +YG A LF +A  LF                             
Sbjct: 361  MDI-EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 419

Query: 1036 -------EMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPACNAII 1194
                   EM++  I P+A +Y  ++  + +  +      ++++++S    +D      +I
Sbjct: 420  KATNLVREMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 479

Query: 1195 KACGHLGMVIEAEEVFHDMK-------------------------------KKGVSPNIK 1281
             A   +G++  A+ + H++K                               + G   +I 
Sbjct: 480  VAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDIS 539

Query: 1282 TYNTMLRLYEEAHMFGEAILLFARIQKRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEM 1461
             +  M+ LY     +   I +F +++              +  + K  ++EKA ++ +EM
Sbjct: 540  VFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREM 599

Query: 1462 QDKNIRANSITYSTLISMYGKAGKHKEAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLI 1641
            Q++        +  ++S+Y      +  E +FQR  S      + L+  +  +Y RA  +
Sbjct: 600  QEEGCVFPDEVHFQMLSLYSSKKDFEMVETLFQRLESEPNVNSKELHLVVAALYERADKL 659

Query: 1642 GHANRLLLELNQSKDLLP 1695
              A+R++  + +   L P
Sbjct: 660  NDASRVMNRMRERGILKP 677


>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g39980, chloroplastic; Flags: Precursor
            gi|10176990|dbj|BAB10222.1| unnamed protein product
            [Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 678

 Score =  488 bits (1255), Expect = e-135
 Identities = 242/578 (41%), Positives = 377/578 (65%), Gaps = 1/578 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            EL+AS+    +E E++ L+  +K + L ++ MV  L+ E DWQR+LAL DW+ E   Y+P
Sbjct: 94   ELLASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTP 153

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S++ YNV+L  VLRAKQ+D+A GL  EM  + +A DRYT+ T IT++ ++     AL WL
Sbjct: 154  SVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWL 213

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             KME   VS D   Y+ +I L+ R  +YSKAIS+F+RLK   +  PD+  YN+M+++YG 
Sbjct: 214  QKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGI-TPDLVAYNSMINVYGK 272

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +AR L  EM    + P+  SY  LL  YV N +F E L+V+ EMK  +  LDL  
Sbjct: 273  AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L MV EA+ +F  ++K  + PN+ +YNT+LR+Y EA +FGEAI LF  +Q
Sbjct: 333  CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
            ++            IKI+ K +++EKA +L+QEMQ + I  N+ITYST+IS++GKAGK  
Sbjct: 393  RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD 452

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLA 1719
             A  +FQ+ RS+ V++D+ LY +MI+ Y R GL+GHA RLL EL    ++   TAI +LA
Sbjct: 453  RAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILA 512

Query: 1720 KAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPT 1899
            KAG+ EEATW+F +    GE++D  +F  M++L+++   + N+++V++  R AG  P   
Sbjct: 513  KAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSN 572

Query: 1900 MLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKL 2079
            ++  +  AY K + +++A ++YRE++ +G + P++VHFQ++ +Y+ K D E V +LF++L
Sbjct: 573  VIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRL 632

Query: 2080 ELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERR 2193
            E D N++ + L+L ++ +Y + ++ +DA R+ + +  R
Sbjct: 633  ESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRER 670



 Score =  105 bits (262), Expect = 9e-20
 Identities = 87/438 (19%), Positives = 181/438 (41%), Gaps = 66/438 (15%)
 Frame = +1

Query: 580  DWQRALALHDWMIERGGYSPSIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTF 759
            D+ +A+++    ++R G +P +  YN ++    +AK +  A  L KEM+  GV  +  ++
Sbjct: 240  DYSKAISIFS-RLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSY 298

Query: 760  CTFITAYARQAKLHLALQWLHKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKT 939
             T ++ Y    K   AL    +M+  + ++D  T   +I + G+     +A  LF  L+ 
Sbjct: 299  STLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 358

Query: 940  MDVWRPDIFIYNTMVDIYGSAGLFDDARSLF----------------------------- 1032
            MD+  P++  YNT++ +YG A LF +A  LF                             
Sbjct: 359  MDI-EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 417

Query: 1033 ------VEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPACNAII 1194
                   EM++  I P+A +Y  ++  + +  +      ++++++S    +D      +I
Sbjct: 418  KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 477

Query: 1195 KACGHLGMVIEAEEVFHDMK-------------------------------KKGVSPNIK 1281
             A   +G++  A+ + H++K                               + G   +I 
Sbjct: 478  VAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDIS 537

Query: 1282 TYNTMLRLYEEAHMFGEAILLFARIQKRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEM 1461
             +  M+ LY     +   I +F +++              +  + K  ++EKA ++ +EM
Sbjct: 538  VFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM 597

Query: 1462 QDKNIRANSITYSTLISMYGKAGKHKEAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLI 1641
            Q++        +  ++S+Y      +  E +FQR  S      + L+  +  +Y RA  +
Sbjct: 598  QEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKL 657

Query: 1642 GHANRLLLELNQSKDLLP 1695
              A+R++  + +   L P
Sbjct: 658  NDASRVMNRMRERGILKP 675


>gb|EMJ16220.1| hypothetical protein PRUPE_ppa003340mg [Prunus persica]
          Length = 584

 Score =  487 bits (1254), Expect = e-135
 Identities = 242/578 (41%), Positives = 379/578 (65%), Gaps = 1/578 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            EL++S+    +E E+Y LM  +KG+ L ++ MV  L+ E DWQR+LA+ DW+ E   Y+P
Sbjct: 3    ELLSSIGQTQNEQELYSLMSTYKGRQLSIRFMVSLLSREPDWQRSLAILDWINEEALYTP 62

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S++ YNV++  VLRAKQW++A GL +EM  + +A DRYT+ T IT++ +      AL WL
Sbjct: 63   SVFAYNVVIRNVLRAKQWEIAHGLFEEMRQRALAPDRYTYSTLITSFGKAGMFDSALSWL 122

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             KME   VS D   Y+ +I L+ +  +YSKAIS+F+RLK + +  PD+  YN+M++++G 
Sbjct: 123  QKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRLGIM-PDLVAYNSMINVFGK 181

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +AR L  EM+   + PD  SY  LL  Y+ N++F E L+V+ EM      LDL  
Sbjct: 182  AKLFREARLLLKEMRAVGVLPDTVSYSTLLSMYIENQKFVEALSVFSEMNEVKCPLDLTT 241

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L M  EA+ +F  M+K G+ PN+ +YNT+LR+Y +A +FGEAI LF  +Q
Sbjct: 242  CNIMIDVYGQLDMAKEADRLFWSMRKMGLEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ 301

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
            +             IKI+ K+L++EKA +L+QEMQ+  I+ N++TYST+IS++GKAGK  
Sbjct: 302  RMDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNSGIQPNAMTYSTIISIWGKAGKLD 361

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLA 1719
             A  +FQ+ RS+ V++D+ LY +MI+ Y R GL+ HA RLL EL +  ++   TAI +LA
Sbjct: 362  RAAMLFQKLRSSGVEIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPRETAITILA 421

Query: 1720 KAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPT 1899
             AG++EEATW+F +    GE++D  +F  M+DLF++   + N ++V++  R AG  P+  
Sbjct: 422  GAGRIEEATWVFRQAFDAGEVKDISVFGCMIDLFSRNRKYANCIEVFEKMRVAGYFPASN 481

Query: 1900 MLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKL 2079
            ++  +  A+ KL+ +++A +LYRE++ +G +  ++VHFQ++ +Y  + D + V  LF++L
Sbjct: 482  VIDLVLNAFGKLREFEKADALYREMQEEGCVFSDEVHFQMLTLYGARKDFKMVEALFKRL 541

Query: 2080 ELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERR 2193
              D NI+K+ L+L ++ IY + NR +DA RI +++  R
Sbjct: 542  MCDPNINKKELHLVVASIYERSNRLNDASRIMNKMNER 579


>ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297316573|gb|EFH46996.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 680

 Score =  486 bits (1251), Expect = e-134
 Identities = 242/578 (41%), Positives = 374/578 (64%), Gaps = 1/578 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            EL+AS+    +E E++ L+  +K + L ++ MV  L+ E DWQR+LAL DW+ E   Y+P
Sbjct: 96   ELLASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTP 155

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S++ YNV+L  VLRAKQ+ +A GL  EM  + +A DRYT+ T IT++ ++     AL WL
Sbjct: 156  SVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWL 215

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             KME   VS D   Y+ +I L+ R  +YSKAIS+F+RLK   +  PD+  YN+M+++YG 
Sbjct: 216  QKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGI-TPDLVAYNSMINVYGK 274

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +AR L  EM    + P+  SY  LL  YV N +F E L+V+ EMK  +  LDL  
Sbjct: 275  AKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTT 334

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L MV EA+ +F  ++K  + PN+ +YNT+LR+Y EA +FGEAI LF  +Q
Sbjct: 335  CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 394

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
            ++            IKI+ K +++EKA +L+QEMQ + I  N+ITYST+IS++GKAGK  
Sbjct: 395  RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD 454

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLA 1719
             A  +FQ+ RS+ V++D+ LY +MI+ Y R GL+GHA RLL EL    ++   TAI +LA
Sbjct: 455  RAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILA 514

Query: 1720 KAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPT 1899
            KAG  EEATW+F +    GE++D  +F  M++L+++   + N+++V++  R AG  P   
Sbjct: 515  KAGSTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSN 574

Query: 1900 MLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKL 2079
             +  +  AY K + +++A ++YRE++ +G + P++VHFQ++ +Y+ K D E V +LFE+L
Sbjct: 575  AIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFERL 634

Query: 2080 ELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERR 2193
            E D N++ + L+L ++ +Y + ++ +DA R+ + +  R
Sbjct: 635  ESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRER 672



 Score =  105 bits (261), Expect = 1e-19
 Identities = 86/438 (19%), Positives = 181/438 (41%), Gaps = 66/438 (15%)
 Frame = +1

Query: 580  DWQRALALHDWMIERGGYSPSIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTF 759
            D+ +A+++    ++R G +P +  YN ++    +AK +  A  L KEM+  GV+ +  ++
Sbjct: 242  DYSKAISIFS-RLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSY 300

Query: 760  CTFITAYARQAKLHLALQWLHKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKT 939
             T ++ Y    K   AL    +M+  +  +D  T   +I + G+     +A  LF  L+ 
Sbjct: 301  STLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 360

Query: 940  MDVWRPDIFIYNTMVDIYGSAGLFDDARSLF----------------------------- 1032
            MD+  P++  YNT++ +YG A LF +A  LF                             
Sbjct: 361  MDI-EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 419

Query: 1033 ------VEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPACNAII 1194
                   EM++  I P+A +Y  ++  + +  +      ++++++S    +D      +I
Sbjct: 420  KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 479

Query: 1195 KACGHLGMVIEAEEVFHDMK-------------------------------KKGVSPNIK 1281
             A   +G++  A+ + H++K                               + G   +I 
Sbjct: 480  VAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGSTEEATWVFRQAFESGEVKDIS 539

Query: 1282 TYNTMLRLYEEAHMFGEAILLFARIQKRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEM 1461
             +  M+ LY     +   I +F +++              +  + K  ++EKA ++ +EM
Sbjct: 540  VFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREM 599

Query: 1462 QDKNIRANSITYSTLISMYGKAGKHKEAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLI 1641
            Q++        +  ++S+Y      +  E +F+R  S      + L+  +  +Y RA  +
Sbjct: 600  QEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFERLESDPNVNSKELHLVVAALYERADKL 659

Query: 1642 GHANRLLLELNQSKDLLP 1695
              A+R++  + +   L P
Sbjct: 660  NDASRVMNRMRERGILKP 677


>gb|EOY03346.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao]
          Length = 672

 Score =  484 bits (1247), Expect = e-134
 Identities = 242/578 (41%), Positives = 377/578 (65%), Gaps = 1/578 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            EL AS+    +  +++ L+  +K + L ++ MV  L+ E DWQR+LAL DW+ E   YSP
Sbjct: 91   ELFASISKTQNGKDLFTLLSPYKTRQLSIRFMVSLLSRETDWQRSLALLDWVNEEARYSP 150

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S++ YNV++  V++AKQW +A GL +EM  KG+  DR+T+ T IT + ++     AL WL
Sbjct: 151  SLFAYNVVIRNVVKAKQWAIAHGLFEEMREKGLTPDRFTYSTLITYFGKEGMFDSALSWL 210

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             KME   VS D   ++ +I L+ + R+YSKAIS+F +LK   +  PD+  YN+M++++G 
Sbjct: 211  QKMENDGVSGDLVLFSNLIELSRKLRDYSKAISIFNKLKRSGIV-PDLVCYNSMINVFGK 269

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +AR L  EM+   + PD  SY  +L  YV N +F E L+V+ EM      LDL  
Sbjct: 270  AKLFREARLLVKEMRDVGVMPDTVSYSTVLNMYVENHKFVEALSVFAEMNEVKCPLDLTT 329

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L M  EA+ +F  M+K G+ PN+ +YNT+L++Y EA ++GEAI LF  + 
Sbjct: 330  CNIMIDVYGQLDMAKEADRLFWGMRKMGIEPNVVSYNTLLKVYGEAELYGEAIHLFRLMH 389

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
            ++            IKI+ K+L++EKA +L+QEMQ++ I  N+ITYST+IS++GKAGK  
Sbjct: 390  RKDIEQNVVTYNTMIKIYGKSLEHEKAYNLVQEMQNRGIEPNAITYSTIISIWGKAGKLD 449

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLA 1719
             A  +FQ+ RS+ V++D+ LY +MI+ Y RAGL+ HA RLL EL Q  +L   TAI +LA
Sbjct: 450  RAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKQPDNLPRDTAIMILA 509

Query: 1720 KAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPT 1899
            +AG++EEATW+F +    GE++D  +F LM+DLF++   H N+++V++  R AG  P   
Sbjct: 510  RAGRIEEATWVFRQACDAGEVKDISVFGLMIDLFSRNKKHANVIEVFEKMRSAGYFPDSN 569

Query: 1900 MLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKL 2079
            ++  +  AY KL+ +D+A ++Y+E++ +G + P++VHFQ++ +   + D + V +LFEKL
Sbjct: 570  VIALVLNAYGKLREFDKADAVYKEMQEEGCVFPDEVHFQMLSLCGARKDFKMVESLFEKL 629

Query: 2080 ELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERR 2193
            + D NI+K+ L+L ++ IY + NR +DA +I + +  R
Sbjct: 630  DSDPNINKKELHLVVASIYERGNRLNDASQIMNRMSER 667


>ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Populus trichocarpa]
            gi|550320029|gb|EEF04162.2| hypothetical protein
            POPTR_0017s11210g [Populus trichocarpa]
          Length = 639

 Score =  484 bits (1246), Expect = e-134
 Identities = 240/577 (41%), Positives = 371/577 (64%), Gaps = 1/577 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            EL+ S+    +E+++Y L+  +K + L ++ MV  ++ E DWQR+LAL DW+ +   YSP
Sbjct: 56   ELLLSISQTQNELQLYSLLSPYKDRQLSIRFMVSVISRESDWQRSLALLDWINDIARYSP 115

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S++ YNV+L  VLRAKQWD A GL  EM N+ +A DRYT+ T IT + +      +L WL
Sbjct: 116  SVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFWL 175

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             +ME   VS D   Y+ +I L+ +  +YSKAIS+F RLK   +  PD+  YN+M++++G 
Sbjct: 176  QQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIM-PDLVAYNSMINVFGK 234

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +A+ L  EM+   + PD  SY  LL  YV N +F E L+V+ EM      LDL  
Sbjct: 235  AKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTT 294

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L M  EA+ +F  M+K G+ PN+ +YNT+LR+Y E  +FGEAI LF  +Q
Sbjct: 295  CNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQ 354

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
            K+            IK++ K+L++EKA +L+QEMQ++ I  N+ITYST+IS++GKAGK  
Sbjct: 355  KKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLD 414

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLA 1719
             A  +FQ+ RS+ V++D+ LY +MI+ Y R+GL+ HA RLL EL     +   TAI++LA
Sbjct: 415  RAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELKHPDSIPRETAIKILA 474

Query: 1720 KAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPT 1899
            +AG++EEATW+F +    GE++D  +F  M+DLF++     N+++V++  R AG  P   
Sbjct: 475  RAGRIEEATWVFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVIEVFEKMRGAGYFPDSN 534

Query: 1900 MLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKL 2079
            ++  +  AY KL  +++A +LY+E++ +  + P++VHFQ++ +Y  + D   +  LFE+L
Sbjct: 535  VIALVLNAYGKLHEFEKADALYKEMQEEECVFPDEVHFQMLSLYGARKDFMMIEALFERL 594

Query: 2080 ELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIER 2190
            + D NI+K+ L+L ++ IY + NR +DA RI + + +
Sbjct: 595  DSDPNINKKELHLVVASIYERKNRLNDASRIMNRMSK 631


>ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543458|gb|EEF44989.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  483 bits (1243), Expect = e-133
 Identities = 244/578 (42%), Positives = 381/578 (65%), Gaps = 2/578 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            +L+ S+    +E+E+Y L+  +K + L ++ MV  +++E DWQR+LAL DW+ E   YSP
Sbjct: 73   QLLISISQTQNEVELYSLLSPYKERQLSIRFMVSLISQEADWQRSLALLDWINEVARYSP 132

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S++ YNV+L  VLRAK+WDLA GL  EM  + ++ DRYT+ T IT++ +      +L WL
Sbjct: 133  SVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFWL 192

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             +ME   VS D   Y+ +I L+ +  +YSKAIS+F RLK   +  PD+  YN+M++++G 
Sbjct: 193  QQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGI-TPDLVAYNSMINVFGK 251

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +AR L  EM+   + PD  SY  LL  YV N +F E L+V+ EM   +  LDL  
Sbjct: 252  ARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMT 311

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L MV EA+ +F  M+K G+ PN+ +YNT+L++Y EA +FGEAI LF  +Q
Sbjct: 312  CNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQ 371

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
            ++            IKI+ K+L++EKA +L+QEMQ + I  N+ITYST+IS++GKAGK  
Sbjct: 372  RKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLD 431

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPA-TAIRVL 1716
             A  +FQ+ RS+ V++D+ LY +MI+ Y RAGL+ HA RLL +L +  D++P  TAI++L
Sbjct: 432  RAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDL-KCPDIIPRDTAIKIL 490

Query: 1717 AKAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSP 1896
            A+AG++EEATW+F +    GE++D  +F  M++LF++     N+++V++  R AG  P  
Sbjct: 491  ARAGRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYFPDS 550

Query: 1897 TMLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEK 2076
             ++  +  AY KL+ +++A ++YRE++ +  + P++VHFQ++ +Y  + D   V +LFEK
Sbjct: 551  DVIALVLNAYGKLREFEKADAVYREMQEEECVFPDEVHFQMLSLYGARKDFIMVESLFEK 610

Query: 2077 LELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIER 2190
            L+ D NI+K+ L+L ++ IY + NR +DA RI + + +
Sbjct: 611  LDSDPNINKKELHLVVASIYERQNRLNDASRIMNRMSK 648


>ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Solanum tuberosum]
          Length = 668

 Score =  481 bits (1239), Expect = e-133
 Identities = 242/578 (41%), Positives = 375/578 (64%), Gaps = 1/578 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            +L++S+   ++E E++ LM  +KG+ L ++ MV  L+ E DWQR+LAL DW+ E   Y+P
Sbjct: 89   DLLSSIGQTTNEHELFALMSPYKGRNLSMRFMVTLLSRESDWQRSLALLDWINEVALYTP 148

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S++ YNV L  VLRAKQW LA GL  EM  + ++ DRYT+ T IT + ++     AL WL
Sbjct: 149  SVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTYSTLITYFGKEGLFDDALSWL 208

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             KME   VS D   Y  +I L+ +  +Y+KAIS+F+RLKT  +  PD+  YNTM++++G 
Sbjct: 209  QKMEQDHVSGDLVLYCNLIELSRKLCDYTKAISIFSRLKTSGI-TPDLVAYNTMINVFGK 267

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +A+ L  EM++  + PD  SY  LL  YV N++F E L+V+ EM      LDL  
Sbjct: 268  AKLFREAQLLIKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEVKCSLDLTT 327

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L M  EA+ +F  M+K G+ PN+ +YNT+LR+Y EA +FGEAI LF  +Q
Sbjct: 328  CNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQ 387

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
            ++            IKI+ K L++EKA +L+QEMQ+  I  N+ITYST+IS++GK GK  
Sbjct: 388  RKSIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWGKVGKLD 447

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLA 1719
             A  +FQ+ RS+ V++D+ LY +MI+ Y RAGL+ HA RLL EL +  ++   TAI +LA
Sbjct: 448  RAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMILA 507

Query: 1720 KAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPT 1899
             +G++EEATW+F +    GE++D  +FE M++L+++   + N+++V++  R  G  P+  
Sbjct: 508  GSGRIEEATWVFRQAFDAGELKDIAVFECMIELYSRNRKYTNLIEVFEKMRGTGYFPNSN 567

Query: 1900 MLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKL 2079
            ++  +  AY KLQ +++A  +Y+E+  +G +  ++VHFQ++ +Y  + + E V TL++ L
Sbjct: 568  VIALVLNAYGKLQEFEKADMVYKEMHEEGCVFSDEVHFQMLSLYGARRNYEMVETLYKML 627

Query: 2080 ELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERR 2193
            + D N++K+ L+L ++ IY K NR +DA RI + +  R
Sbjct: 628  DSDPNVNKKELHLVVAGIYEKANRVNDASRIVNRMTYR 665


>ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Citrus sinensis]
          Length = 677

 Score =  480 bits (1236), Expect = e-132
 Identities = 238/580 (41%), Positives = 375/580 (64%), Gaps = 1/580 (0%)
 Frame = +1

Query: 457  VGELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGY 633
            + EL+ S+    +E E++ L+  +K + L ++ MV  L  E+++QR++A+ DW+ E   Y
Sbjct: 91   MNELLKSISETQNEHELFALLSPYKDRQLSIRFMVSLLTREQNYQRSVAILDWINEEARY 150

Query: 634  SPSIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQ 813
            SPS++ YNV+L  VLRAKQW+LA GL  EM  +G+A DRYT+ T IT + ++     A+ 
Sbjct: 151  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 210

Query: 814  WLHKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIY 993
            WL +ME   VS D   Y+ +I LA +  +YSKAIS+F+RLK+  +  PD+  YNTM++++
Sbjct: 211  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV-PDLVAYNTMINVF 269

Query: 994  GSAGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDL 1173
            G A LF +AR L  EM+   + PD  SY  LL  YV N +F E L+V+ EM   +  LDL
Sbjct: 270  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 329

Query: 1174 PACNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFAR 1353
              CN +I   G L M  +A+ +F  M+K G+ P++ +YNT+LR+Y EA +FGEAI LF  
Sbjct: 330  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 389

Query: 1354 IQKRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGK 1533
            +Q++            IKI+ K+L++EKA +L+QEMQ++ I  N+ITYST+I+++GKAGK
Sbjct: 390  MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 449

Query: 1534 HKEAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRV 1713
               A  +FQ+ RS+ V++D  LY +MI+ Y R GL+ HA RLL EL Q   +   TAI +
Sbjct: 450  LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 509

Query: 1714 LAKAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPS 1893
            LA+AG++EEATW+F +    GE++D  +F  M++LF++   + N+++V++  R AG  P 
Sbjct: 510  LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 569

Query: 1894 PTMLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFE 2073
              ++  +  +Y KL+ ++ A  LY E++ +G +  ++VHFQ++ +Y  + D   + +LFE
Sbjct: 570  SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFE 629

Query: 2074 KLELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERR 2193
            +L+ D NI+K+ L+  ++ IY + NR +DA RI + + +R
Sbjct: 630  RLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 669



 Score =  102 bits (253), Expect = 1e-18
 Identities = 95/509 (18%), Positives = 200/509 (39%), Gaps = 83/509 (16%)
 Frame = +1

Query: 406  ICNSTDWISSNGVFSQMVGELVASLR--------------MVSDEIEMYELMEKWK--GK 537
            +  +  W  ++G+F +M    +A  R              M    I   + ME+ +  G 
Sbjct: 164  VLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGD 223

Query: 538  LGLKQMVMALNEE-KDWQRALALHDWMIERGGYSPSIYGYNVILYKVLRAKQWDLAEGLA 714
            L L   ++ L  +  D+ +A+++    ++  G  P +  YN ++    +AK +  A  L 
Sbjct: 224  LVLYSNLIELARKLSDYSKAISIFS-RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI 282

Query: 715  KEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWLHKMEMADVSIDFFT----------- 861
            +EM  +GV  D  ++ T +  Y    K   AL    +M   +  +D  T           
Sbjct: 283  EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 342

Query: 862  ------------------------YTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFI 969
                                    Y T++ + G    + +AI LF  ++  ++   ++  
Sbjct: 343  DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI-EQNVVT 401

Query: 970  YNTMVDIYGSAGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMK 1149
            YNTM+ IYG +   + A +L  EM+   I P+A +Y  ++  + +  +      ++++++
Sbjct: 402  YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 461

Query: 1150 SFSFYLDLPACNAIIKACGHLGMVIEAEEVFHDMKKKGVSP------------------- 1272
            S    +D      +I A   +G+V  A+ + H++++    P                   
Sbjct: 462  SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATW 521

Query: 1273 ------------NIKTYNTMLRLYEEAHMFGEAILLFARIQKRXXXXXXXXXXXXIKIFS 1416
                        +I  +  M+ L+     +   I +F +++              +  + 
Sbjct: 522  VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 581

Query: 1417 KALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHKEAEEMFQRFRSTKVKMDEA 1596
            K  ++E A  L  EMQ++    +   +  ++S+YG        E +F+R  S      + 
Sbjct: 582  KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 641

Query: 1597 LYYSMILIYVRAGLIGHANRLLLELNQSK 1683
            L++ +  IY RA  +  A+R++  +N+ +
Sbjct: 642  LHHVVAGIYERANRLNDASRIMNRMNKRR 670


>ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Glycine max]
          Length = 658

 Score =  480 bits (1236), Expect = e-132
 Identities = 244/582 (41%), Positives = 376/582 (64%), Gaps = 1/582 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            EL+A++    +E E+Y +M  + G+ L ++ MV  L+ E DWQRALAL DW+ ++  YSP
Sbjct: 74   ELLAAIGQTQNEDELYAVMSPYNGRQLSMRFMVSLLSREPDWQRALALLDWINDKALYSP 133

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S++ YNV+L  VLRAKQW LA GL  EM  KG++ DRYT+ T IT++ +      +L WL
Sbjct: 134  SLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSFGKHGLFDSSLFWL 193

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             +ME  +VS D   Y+ +I LA +  +YSKAIS+F+RLK   +  PD+  YN+M++++G 
Sbjct: 194  QQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTI-SPDLIAYNSMINVFGK 252

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +AR L  EM+   + PD  SY  LL  YV N++F E L+++ EM      LDL  
Sbjct: 253  AKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLTT 312

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L M  EA+ +F  M+K G+ PN+ +YNT+LR+Y EA +FGEAI LF  +Q
Sbjct: 313  CNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQ 372

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
             +            I I+ K L++EKA +L+QEM+ + I  N+ITYST+IS++ KAGK  
Sbjct: 373  SKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLD 432

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLA 1719
             A  +FQ+ RS+ V++DE LY +MI+ Y RAGL+ HA RLL EL +  ++   TAI +LA
Sbjct: 433  RAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIGILA 492

Query: 1720 KAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPT 1899
            +AG++EEATW+F +     E++D  +F  M++LF+K   + N+++V++  R  G  P   
Sbjct: 493  RAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYGNVVEVFEKMRVVGYFPDSD 552

Query: 1900 MLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKL 2079
            ++  +  A+ KL+ +D+A +LYR++  +G + P++VHFQ++ +Y  + D   V +LFEKL
Sbjct: 553  VIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLYGARKDFVMVESLFEKL 612

Query: 2080 ELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERRVELS 2205
            + + NI+K+ L+L ++ IY + +R +DA RI + + ++   S
Sbjct: 613  DSNPNINKKELHLVVASIYERADRLNDASRIMNRMNQKANRS 654


>gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis]
          Length = 688

 Score =  480 bits (1235), Expect = e-132
 Identities = 245/578 (42%), Positives = 373/578 (64%), Gaps = 1/578 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            EL+ S+    +E E++ ++  +KG+ L +K MV+ L+ E DWQR+LA+ DW+ E+  Y+P
Sbjct: 105  ELLRSIWQTQNEQELFSVLSPYKGRQLSIKFMVLVLSRETDWQRSLAILDWINEQALYTP 164

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S++ YNV L  VLRAKQW +A GL  EM  + +A DRYT+ T IT + ++     AL WL
Sbjct: 165  SVFAYNVALRNVLRAKQWQVAHGLFDEMRQRALAPDRYTYSTLITYFGKEGMFDAALSWL 224

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             KME   VS D   Y+ +I L+ +  +YSKAIS+F+RLK   +  PD+  YN+M++++G 
Sbjct: 225  QKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKWSGI-TPDLVAYNSMINVFGK 283

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +AR L  EM+   + PD  SY  LL  YV N++F E L+V+ EM      LDL  
Sbjct: 284  AKLFREARLLITEMRAAGVLPDTVSYSTLLTMYVENQKFIEALSVFSEMNEVRCRLDLTT 343

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L M  EA+ +F  M+K G+ PN+ +YNT+LR+Y EA +FGEAI LF  +Q
Sbjct: 344  CNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQ 403

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
            ++            IKI+ K+L++EKA +L+QEMQ + I  N+ITYST+IS++GKAGK  
Sbjct: 404  RKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLD 463

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLA 1719
             A  +FQ+ RS+ V++D+ LY +MI+ Y +AGL+ HA RLL EL +  ++   TAI +LA
Sbjct: 464  RAAILFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRETAITILA 523

Query: 1720 KAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPT 1899
             AG+LEEATW+F +    GEI+D  +F  M++LF+K   + N+ +V+   R  G  P   
Sbjct: 524  GAGRLEEATWVFRQASDAGEIKDISVFSCMIELFSKNKKYANLTEVFDKMRGVGYFPDSN 583

Query: 1900 MLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKL 2079
            ++  +  AY KL+ +++A ++Y+E++ +G +  ++VHFQ++ +Y  + D + V  LFE+L
Sbjct: 584  VIALVLNAYGKLRDFEKADAVYKEMQEEGCVFSDEVHFQMISLYGARKDFKMVEELFERL 643

Query: 2080 ELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERR 2193
            E D NI+K  L+L ++ IY + N+ +DA RI + +  R
Sbjct: 644  ESDPNINKE-LHLVVAGIYERANKLNDASRIMNRMNDR 680


>ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citrus clementina]
            gi|557533112|gb|ESR44295.1| hypothetical protein
            CICLE_v10011224mg [Citrus clementina]
          Length = 677

 Score =  480 bits (1235), Expect = e-132
 Identities = 238/580 (41%), Positives = 375/580 (64%), Gaps = 1/580 (0%)
 Frame = +1

Query: 457  VGELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGY 633
            + EL+ S+    +E E++ L+  +K + L ++ MV  L  E+++QR++A+ DW+ E   Y
Sbjct: 91   MNELLKSISETQNEHELFALLSPYKDRQLSIRFMVSLLTREQNYQRSVAILDWINEEARY 150

Query: 634  SPSIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQ 813
            SPS++ YNV+L  VLRAKQW+LA GL  EM  +G+A DRYT+ T IT + ++     A+ 
Sbjct: 151  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 210

Query: 814  WLHKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIY 993
            WL +ME   VS D   Y+ +I LA +  +YSKAIS+F+RLK+  +  PD+  YNTM++++
Sbjct: 211  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV-PDLVAYNTMINVF 269

Query: 994  GSAGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDL 1173
            G A LF +AR L  EM+   + PD  SY  LL  YV N +F E L+V+ EM   +  LDL
Sbjct: 270  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 329

Query: 1174 PACNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFAR 1353
              CN +I   G L M  +A+ +F  M+K G+ P++ +YNT+LR+Y EA +FGEAI LF  
Sbjct: 330  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 389

Query: 1354 IQKRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGK 1533
            +Q++            IKI+ K+L++EKA +L+QEMQ++ I  N+ITYST+I+++GKAGK
Sbjct: 390  MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 449

Query: 1534 HKEAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRV 1713
               A  +FQ+ RS+ V++D  LY +MI+ Y R GL+ HA RLL EL Q   +   TAI +
Sbjct: 450  LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPDTIPRETAITI 509

Query: 1714 LAKAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPS 1893
            LA+AG++EEATW+F +    GE++D  +F  M++LF++   + N+++V++  R AG  P 
Sbjct: 510  LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 569

Query: 1894 PTMLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFE 2073
              ++  +  +Y KL+ ++ A  LY E++ +G +  ++VHFQ++ +Y  + D   + +LFE
Sbjct: 570  SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFE 629

Query: 2074 KLELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERR 2193
            +L+ D NI+K+ L+  ++ IY + NR +DA RI + + +R
Sbjct: 630  RLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 669



 Score =  101 bits (252), Expect = 1e-18
 Identities = 95/509 (18%), Positives = 200/509 (39%), Gaps = 83/509 (16%)
 Frame = +1

Query: 406  ICNSTDWISSNGVFSQMVGELVASLR--------------MVSDEIEMYELMEKWK--GK 537
            +  +  W  ++G+F +M    +A  R              M    I   + ME+ +  G 
Sbjct: 164  VLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGD 223

Query: 538  LGLKQMVMALNEE-KDWQRALALHDWMIERGGYSPSIYGYNVILYKVLRAKQWDLAEGLA 714
            L L   ++ L  +  D+ +A+++    ++  G  P +  YN ++    +AK +  A  L 
Sbjct: 224  LVLYSNLIELARKLSDYSKAISIFS-RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI 282

Query: 715  KEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWLHKMEMADVSIDFFT----------- 861
            +EM  +GV  D  ++ T +  Y    K   AL    +M   +  +D  T           
Sbjct: 283  EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 342

Query: 862  ------------------------YTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFI 969
                                    Y T++ + G    + +AI LF  ++  ++   ++  
Sbjct: 343  DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI-EQNVVT 401

Query: 970  YNTMVDIYGSAGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMK 1149
            YNTM+ IYG +   + A +L  EM+   I P+A +Y  ++  + +  +      ++++++
Sbjct: 402  YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 461

Query: 1150 SFSFYLDLPACNAIIKACGHLGMVIEAEEVFHDMKKKGVSP------------------- 1272
            S    +D      +I A   +G+V  A+ + H++++    P                   
Sbjct: 462  SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPDTIPRETAITILARAGRIEEATW 521

Query: 1273 ------------NIKTYNTMLRLYEEAHMFGEAILLFARIQKRXXXXXXXXXXXXIKIFS 1416
                        +I  +  M+ L+     +   I +F +++              +  + 
Sbjct: 522  VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 581

Query: 1417 KALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHKEAEEMFQRFRSTKVKMDEA 1596
            K  ++E A  L  EMQ++    +   +  ++S+YG        E +F+R  S      + 
Sbjct: 582  KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 641

Query: 1597 LYYSMILIYVRAGLIGHANRLLLELNQSK 1683
            L++ +  IY RA  +  A+R++  +N+ +
Sbjct: 642  LHHVVAGIYERANRLNDASRIMNRMNKRR 670


>gb|ESW35832.1| hypothetical protein PHAVU_001G268500g [Phaseolus vulgaris]
          Length = 677

 Score =  478 bits (1229), Expect = e-132
 Identities = 240/578 (41%), Positives = 375/578 (64%), Gaps = 1/578 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            EL+A++    +E E+Y +M  + G+ L ++ MV  L+ E DWQR +AL DW+ E+  YSP
Sbjct: 93   ELLAAIGETQNEDELYAVMSPYSGRQLSMRFMVSLLSREPDWQRTVALLDWINEKALYSP 152

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S++ YNV+L  VLRAKQW LA GL  EM +KG++ DRYT+ T IT++A+      +L WL
Sbjct: 153  SLFAYNVVLRNVLRAKQWHLAHGLFDEMRHKGLSPDRYTYSTLITSFAKDGLFDSSLFWL 212

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             +ME  +VS D   Y+ +I LA +  +YSKAIS+F RLK   +  PD+  YN+M++++G 
Sbjct: 213  QQMEQDNVSGDLVLYSNLIDLARKLCDYSKAISIFNRLKASAI-TPDLIAYNSMINVFGK 271

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +AR L  EM    + PD  SY  LL  YV N++F E L+++ +M      LDL  
Sbjct: 272  AKLFREARLLLQEMADNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSQMNEAKCPLDLTT 331

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L M  EA+ +F  M+K  + PN+ +YNT+LR+Y +A +FGEAI LF  +Q
Sbjct: 332  CNIMIDVYGQLHMPKEADRLFWSMRKMEIQPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ 391

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
             +            I I+ K L++EKA +L+QEM+ ++I  N+ITYST+IS++ KAGK  
Sbjct: 392  SKDVPQNVVTYNTMINIYGKTLEHEKATNLVQEMKKRDIEPNAITYSTIISIWEKAGKLD 451

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLA 1719
             A  +FQ+ RS+ V++DE LY +MI+ Y RAGL+ HA RLL EL +  ++   TAI +LA
Sbjct: 452  RAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIVILA 511

Query: 1720 KAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPT 1899
            +AG++EEATW+F +    GE++D  +F  M++LF+K   + N+++V++  RQ G  P   
Sbjct: 512  RAGRIEEATWVFRQAFDAGEVKDISVFGCMINLFSKNKKYSNVVEVFEKMRQVGYFPDSD 571

Query: 1900 MLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKL 2079
            ++  +  A+ KL+ +D+A  LYR++  +G + P++VHFQ++ +Y  + D   V +LFEKL
Sbjct: 572  VIALVLNAFGKLREFDKADGLYRQMHEEGCVFPDEVHFQMLSLYGARKDFMMVESLFEKL 631

Query: 2080 ELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERR 2193
            + + N++K+ L+L ++ IY + +R +DA R+ ++  ++
Sbjct: 632  DSNPNVNKKELHLVVASIYERADRLNDASRVMNKTNQK 669


>ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Solanum lycopersicum]
          Length = 665

 Score =  477 bits (1227), Expect = e-131
 Identities = 241/578 (41%), Positives = 374/578 (64%), Gaps = 1/578 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            +L++S+   ++E E++ LM  +KG+ L ++ MV  L+ E DWQR+LAL DW+ E   Y+P
Sbjct: 86   DLLSSIGQTANEHELFALMSPYKGRNLSMRFMVTLLSRESDWQRSLALLDWINEVALYTP 145

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S++ YNV L  VLRAKQW LA GL  EM  + ++ DRYT+ T IT + ++     AL WL
Sbjct: 146  SVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTYSTLITYFGKEGLFDDALSWL 205

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             KME   VS D   Y  +I L+ +  +Y+KAIS+F+RLKT  +  PD+  YNTM++++G 
Sbjct: 206  QKMEQDHVSGDLVLYCNLIELSRKLCDYTKAISIFSRLKTSGI-TPDLVAYNTMINVFGK 264

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +A+ L  EM++  + PD  SY  LL  YV N++F E L+V+ EM      LDL  
Sbjct: 265  AKLFREAQLLVKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEVKCPLDLTT 324

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L M  EA+ +F  M+K G+ PN+ +YNT+LR+Y EA +FGEAI LF  +Q
Sbjct: 325  CNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQ 384

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
            ++            IKI+ K L++EKA +L+QEMQ+  I  N+ITYST+IS++ K GK  
Sbjct: 385  RKNIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWAKVGKLD 444

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLA 1719
             A  +FQ+ RS+ V++D+ LY +MI+ Y RAGL+ HA RLL EL +  ++   TAI +LA
Sbjct: 445  RAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILA 504

Query: 1720 KAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPT 1899
             +G++EEATW+F +    GE++D  +FE M++L+++   + N+++V++    AG  P+  
Sbjct: 505  GSGRIEEATWVFRQAFDAGELKDIAVFECMIELYSRNRKYTNLIEVFEKMSGAGYFPNSN 564

Query: 1900 MLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKL 2079
            ++  +  AY KLQ +++A  +Y+E+  +G +  ++VHFQ++ +Y  + + E V TL++ L
Sbjct: 565  VIALVLNAYGKLQEFEKADMVYKEMHEEGCVFSDEVHFQMLSLYGARRNYEMVETLYKVL 624

Query: 2080 ELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERR 2193
            + D N++K+ L+L ++ IY K NR +DA RI + +  R
Sbjct: 625  DSDPNVNKKELHLVVAAIYEKANRMNDASRIINRMTYR 662


>ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Glycine max]
          Length = 667

 Score =  477 bits (1227), Expect = e-131
 Identities = 240/577 (41%), Positives = 371/577 (64%), Gaps = 1/577 (0%)
 Frame = +1

Query: 466  LVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSPS 642
            L+A++    +E E+Y +M  + G+ L ++ MV  L+ E DWQRALAL DW+ ++  Y PS
Sbjct: 84   LLAAIGQTQNEDELYAVMSPYNGRQLSMRFMVSLLSREPDWQRALALLDWINDKALYRPS 143

Query: 643  IYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWLH 822
            ++ YNV+L  VLRAKQW LA GL  EM  KG++ DRYT+ T IT + +      +L WL 
Sbjct: 144  LFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFGKHGLFDSSLFWLQ 203

Query: 823  KMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGSA 1002
            +ME  +VS D   Y+ +I LA +  +YSKAIS+F+RLK   +  PD+  YN+M++++G A
Sbjct: 204  QMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTI-TPDLIAYNSMINVFGKA 262

Query: 1003 GLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPAC 1182
             LF +AR L  EM+   + PD  SY  LL  YV N++F E L+++ EM      LDL  C
Sbjct: 263  KLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTTC 322

Query: 1183 NAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQK 1362
            N +I   G L M  EA+ +F  M+K G+ PN+ +YNT+LR+Y EA +FGEAI LF  +Q 
Sbjct: 323  NIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQS 382

Query: 1363 RXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHKE 1542
            +            I I+ K L++EKA +L+QEM  + I  N+ITYST+IS++ KAGK   
Sbjct: 383  KDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDR 442

Query: 1543 AEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLAK 1722
            A  +FQ+ RS+ V++DE LY +MI+ Y R GL+ HA RLL EL +  ++   TAI +LA+
Sbjct: 443  AAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDNIPRDTAIAILAR 502

Query: 1723 AGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPTM 1902
            AG++EEATW+F +     E++D  +F  M++LF+K   + N+++V++  R+ G  P   +
Sbjct: 503  AGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPDSDV 562

Query: 1903 LITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKLE 2082
            +  +  A+ KL+ +D+A +LYR++  +G + P++VHFQ++ +Y  + D   V +LFEKL+
Sbjct: 563  IALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLYGARKDFVMVESLFEKLD 622

Query: 2083 LDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERR 2193
             + NI+K+ L+L ++ IY + +R +DA RI + + ++
Sbjct: 623  SNPNINKKELHLVVASIYERADRLNDASRIMNRMNKK 659


>ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 672

 Score =  466 bits (1200), Expect = e-128
 Identities = 231/580 (39%), Positives = 377/580 (65%), Gaps = 2/580 (0%)
 Frame = +1

Query: 463  ELVASLRMVSDEIEMYELMEKWKGK-LGLKQMVMALNEEKDWQRALALHDWMIERGGYSP 639
            +L AS+R   ++ ++  L+  +K + L ++ MV  L+ E DW+R+LA+ DW+ +   Y+P
Sbjct: 91   DLAASIRATQNDHDLNSLLSPYKSRSLSIRFMVSLLSREPDWRRSLAILDWINDVALYTP 150

Query: 640  SIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTFCTFITAYARQAKLHLALQWL 819
            S++ YNV+L  VLRA QWDLA GL  EM ++ +A DRYT+ T ITA+ +      AL WL
Sbjct: 151  SVFAYNVVLRNVLRAGQWDLAHGLFDEMRHRALAPDRYTYSTLITAFGKAGMFDAALSWL 210

Query: 820  HKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKTMDVWRPDIFIYNTMVDIYGS 999
             KME   VS D   Y+ +I L+ +  +Y+KAI++F+RLK M +  PD+  +N+M++++G 
Sbjct: 211  QKMEQDRVSGDLVLYSNLIELSRKLCDYTKAIAIFSRLKRMGIV-PDLVAFNSMINVFGK 269

Query: 1000 AGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPA 1179
            A LF +AR L  EM+   + PD  SY  LL  YV N +F E L V++EM      LD+  
Sbjct: 270  AKLFREARGLLKEMRAVGVAPDTVSYSTLLTMYVENEKFLEALGVFREMSEVKCGLDITT 329

Query: 1180 CNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTMLRLYEEAHMFGEAILLFARIQ 1359
            CN +I   G L M  EA+ +F  M+K  + PN+ +YNT+LR+Y +A +FGEAI LF  +Q
Sbjct: 330  CNVMIDVYGQLDMAKEADRLFWSMRKMVIEPNVVSYNTLLRVYGDAELFGEAIHLFRMMQ 389

Query: 1360 KRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIRANSITYSTLISMYGKAGKHK 1539
            +             I+I+ K+L++EKA +L+QEMQ + I+ N+ITYST+IS++G+AGK  
Sbjct: 390  RMDVEQNVVTYNTMIRIYGKSLEHEKATNLVQEMQKRGIQPNAITYSTIISIWGRAGKLD 449

Query: 1540 EAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRLLLELNQSKDLLPATAIRVLA 1719
             A  +FQ+ R++ V++D+ LY +MI+ Y R GL+ HA RLL EL +  ++   TAI +LA
Sbjct: 450  RAAMLFQKLRNSGVEIDQVLYQTMIVSYERVGLVAHAKRLLHELKRPDNIPRETAITILA 509

Query: 1720 KAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMHYNILQVYKSARQAGLLPSPT 1899
            +AG++EEATW+F +    G+++D  +F  M++L+++   + N ++V+++ R AG  P+  
Sbjct: 510  RAGRVEEATWVFRQAFEAGQVKDISVFGCMIELYSRNRKYANCIEVFENMRVAGYFPASH 569

Query: 1900 MLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQIMHIYAHKGDLEAVITLFEKL 2079
            ++  +  AY KL+ +++A ++YRE++ +G +  +++HFQ++ +Y  + D + V  +FE+L
Sbjct: 570  VIGLVLNAYGKLREFEKADAVYREMQEEGCVFSDEIHFQMLSLYGARKDFKTVEAMFERL 629

Query: 2080 ELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEI-ERRV 2196
              D NI+K+ L+L ++ IY + NR +D+ RI + + E RV
Sbjct: 630  VCDPNINKKELHLVVAGIYERSNRLNDSHRIMNRMNESRV 669


>dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
          Length = 546

 Score =  466 bits (1199), Expect = e-128
 Identities = 229/538 (42%), Positives = 353/538 (65%)
 Frame = +1

Query: 580  DWQRALALHDWMIERGGYSPSIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTF 759
            DWQR+LAL DW+ E   Y+PS++ YNV+L  VLRAKQ+D+A GL  EM  + +A DRYT+
Sbjct: 2    DWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTY 61

Query: 760  CTFITAYARQAKLHLALQWLHKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKT 939
             T IT++ ++     AL WL KME   VS D   Y+ +I L+ R  +YSKAIS+F+RLK 
Sbjct: 62   STLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKR 121

Query: 940  MDVWRPDIFIYNTMVDIYGSAGLFDDARSLFVEMKTYCIGPDATSYRNLLVSYVRNREFT 1119
              +  PD+  YN+M+++YG A LF +AR L  EM    + P+  SY  LL  YV N +F 
Sbjct: 122  SGI-TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFL 180

Query: 1120 EVLNVYKEMKSFSFYLDLPACNAIIKACGHLGMVIEAEEVFHDMKKKGVSPNIKTYNTML 1299
            E L+V+ EMK  +  LDL  CN +I   G L MV EA+ +F  ++K  + PN+ +YNT+L
Sbjct: 181  EALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 240

Query: 1300 RLYEEAHMFGEAILLFARIQKRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEMQDKNIR 1479
            R+Y EA +FGEAI LF  +Q++            IKI+ K +++EKA +L+QEMQ + I 
Sbjct: 241  RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE 300

Query: 1480 ANSITYSTLISMYGKAGKHKEAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLIGHANRL 1659
             N+ITYST+IS++GKAGK   A  +FQ+ RS+ V++D+ LY +MI+ Y R GL+GHA RL
Sbjct: 301  PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRL 360

Query: 1660 LLELNQSKDLLPATAIRVLAKAGKLEEATWLFHRTLSKGEIQDTCIFELMMDLFAKKNMH 1839
            L EL    ++   TAI +LAKAG+ EEATW+F +    GE++D  +F  M++L+++   +
Sbjct: 361  LHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRY 420

Query: 1840 YNILQVYKSARQAGLLPSPTMLITLFQAYEKLQHYDQALSLYREIEAQGSILPEKVHFQI 2019
             N+++V++  R AG  P   ++  +  AY K + +++A ++YRE++ +G + P++VHFQ+
Sbjct: 421  VNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQM 480

Query: 2020 MHIYAHKGDLEAVITLFEKLELDDNIDKRALYLSLSHIYLKLNRPHDAFRITSEIERR 2193
            + +Y+ K D E V +LF++LE D N++ + L+L ++ +Y + ++ +DA R+ + +  R
Sbjct: 481  LSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRER 538



 Score =  105 bits (262), Expect = 9e-20
 Identities = 87/438 (19%), Positives = 181/438 (41%), Gaps = 66/438 (15%)
 Frame = +1

Query: 580  DWQRALALHDWMIERGGYSPSIYGYNVILYKVLRAKQWDLAEGLAKEMSNKGVAHDRYTF 759
            D+ +A+++    ++R G +P +  YN ++    +AK +  A  L KEM+  GV  +  ++
Sbjct: 108  DYSKAISIFS-RLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSY 166

Query: 760  CTFITAYARQAKLHLALQWLHKMEMADVSIDFFTYTTIILLAGRKRNYSKAISLFTRLKT 939
             T ++ Y    K   AL    +M+  + ++D  T   +I + G+     +A  LF  L+ 
Sbjct: 167  STLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 226

Query: 940  MDVWRPDIFIYNTMVDIYGSAGLFDDARSLF----------------------------- 1032
            MD+  P++  YNT++ +YG A LF +A  LF                             
Sbjct: 227  MDI-EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 285

Query: 1033 ------VEMKTYCIGPDATSYRNLLVSYVRNREFTEVLNVYKEMKSFSFYLDLPACNAII 1194
                   EM++  I P+A +Y  ++  + +  +      ++++++S    +D      +I
Sbjct: 286  KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 345

Query: 1195 KACGHLGMVIEAEEVFHDMK-------------------------------KKGVSPNIK 1281
             A   +G++  A+ + H++K                               + G   +I 
Sbjct: 346  VAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDIS 405

Query: 1282 TYNTMLRLYEEAHMFGEAILLFARIQKRXXXXXXXXXXXXIKIFSKALDYEKAASLLQEM 1461
             +  M+ LY     +   I +F +++              +  + K  ++EKA ++ +EM
Sbjct: 406  VFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM 465

Query: 1462 QDKNIRANSITYSTLISMYGKAGKHKEAEEMFQRFRSTKVKMDEALYYSMILIYVRAGLI 1641
            Q++        +  ++S+Y      +  E +FQR  S      + L+  +  +Y RA  +
Sbjct: 466  QEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKL 525

Query: 1642 GHANRLLLELNQSKDLLP 1695
              A+R++  + +   L P
Sbjct: 526  NDASRVMNRMRERGILKP 543