BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00017585
         (701 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY10285.1| Uncharacterized protein TCM_025656 [Theobroma cacao]   112   9e-23
ref|XP_006607002.1| PREDICTED: uncharacterized protein LOC100788...   112   1e-22
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664...   112   1e-22
ref|XP_006607055.1| PREDICTED: uncharacterized protein LOC100778...   111   3e-22
gb|EOX96724.1| Gag-pol polyprotein, putative [Theobroma cacao]        111   3e-22
ref|XP_006603400.1| PREDICTED: uncharacterized protein LOC102659...   110   3e-22
ref|XP_006605097.1| PREDICTED: uncharacterized protein LOC100803...   106   8e-21
gb|EOY18660.1| Uncharacterized protein TCM_043155 [Theobroma cacao]   105   1e-20
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   105   1e-20
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]             105   1e-20
ref|XP_004980437.1| PREDICTED: uncharacterized protein LOC101781...   104   2e-20
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     104   2e-20
gb|AAQ72729.1| putative gag-pol polyprotein [Petunia x hybrida]       104   2e-20
gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]             103   5e-20
ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594...   101   3e-19
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   100   8e-19
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...   100   8e-19
gb|ABA96215.1| retrotransposon protein, putative, Ty3-gypsy subc...    99   2e-18
gb|ABA91262.1| retrotransposon protein, putative, Ty3-gypsy subc...    99   2e-18
ref|XP_004972012.1| PREDICTED: uncharacterized protein LOC101779...    98   2e-18

>gb|EOY10285.1| Uncharacterized protein TCM_025656 [Theobroma cacao]
          Length = 505

 Score =  112 bits (281), Expect = 9e-23
 Identities = 73/251 (29%), Positives = 113/251 (45%), Gaps = 19/251 (7%)
 Frame = +3

Query: 6   EAYQCALRVEEKFKRRQSRLGGTSRRTESDTNKLSGR---------NGANTARNEQRYKT 158
           +  + AL+VE++  R++S    +SR+ ES +N  S           N + TA +  +  T
Sbjct: 81  DVIRLALKVEKQRSRKRSM--SSSRQQESISNDESQSSVTIPPPKVNSSKTASSNDKETT 138

Query: 159 -----GFNGRCHRCREFGHRVIECPHEHIERRTTLVRXXXXXXXXXXXXXXXXXXXXXXD 323
                  N +C +C+ FGH   +CP+  I                               
Sbjct: 139 FTRASNVNKKCFKCQGFGHIAFDCPNRRIISLVEEEDYANWEKLEPVYDEYDDEEIEEVS 198

Query: 324 TQAPRRMVIR----SLMARSEEDIRRKQLFCVRGKLNGIDGTIMVDSGSQENVVSEEFVK 491
                 +++R    + M   +E   R  +F  R    G    +++DSGS ENV++   V+
Sbjct: 199 ADHGEALIVRRNLNTAMMTKDESWLRHNIFYTRCTSQGKVCNVIIDSGSCENVIANYMVE 258

Query: 492 TRSISTTKHPKPYRVSWLRTDQHVNVEERAKIKIGIG-PYNTTIECDVLPMDAC*VLLGR 668
              + T  HP PY++ WLR    V V +R  ++  IG  Y   + CD++PMDAC +LLGR
Sbjct: 259 KLKLQTEVHPHPYKLQWLRKGNEVKVTKRCCVQFSIGNKYEDEVWCDIIPMDACHLLLGR 318

Query: 669 PWQYDANAIHD 701
           PWQYD  A HD
Sbjct: 319 PWQYDRRAHHD 329


>ref|XP_006607002.1| PREDICTED: uncharacterized protein LOC100788838 [Glycine max]
          Length = 519

 Score =  112 bits (280), Expect = 1e-22
 Identities = 77/254 (30%), Positives = 116/254 (45%), Gaps = 27/254 (10%)
 Frame = +3

Query: 21  ALRVEEKFKRRQSRLGGTSRRTESDTNKLSGRNGANTAR--------------------- 137
           ALRVE++ KRR +    +      +    S + G N+ R                     
Sbjct: 239 ALRVEQQIKRRSATRRNSPNTYNQNWANRSKKEGGNSFRPAATSPYGKSATPSVGGSKHN 298

Query: 138 -NEQRYKTGF-NGRCHRCREFGHRVIECPHEHIERRTTLVRXXXXXXXXXXXXXXXXXXX 311
            +     TG  N +C +C   GH   ECP     RRT +++                   
Sbjct: 299 TSTSSSNTGTRNIKCFKCLGRGHIASECP----TRRTMIMKADGEITSESEISEEEVEEE 354

Query: 312 XXXDT--QAPRRMVIRSLMARSE--EDIRRKQLFCVRGKLNGIDGTIMVDSGSQENVVSE 479
              +   Q    MV R L  + +  +D +R+ +F  R  +NG   +++VD GS  NV S 
Sbjct: 355 EYGEEAMQGDMLMVRRLLGNQMQPLDDNQRENIFHTRCVINGKLCSLIVDGGSCTNVASS 414

Query: 480 EFVKTRSISTTKHPKPYRVSWLRTDQHVNVEERAKIKIGIGPYNTTIECDVLPMDAC*VL 659
             V   ++ T  HP+PY++ WL  D+ V V ++ ++ + IG YN  + CDV+PM+A  VL
Sbjct: 415 TLVTKLNLETKPHPRPYKLQWLSEDEEVKVTQQVEVCLTIGRYNDKVLCDVVPMEATHVL 474

Query: 660 LGRPWQYDANAIHD 701
           LGRPWQYD  A+HD
Sbjct: 475 LGRPWQYDTKAVHD 488


>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
          Length = 1176

 Score =  112 bits (280), Expect = 1e-22
 Identities = 77/254 (30%), Positives = 116/254 (45%), Gaps = 27/254 (10%)
 Frame = +3

Query: 21  ALRVEEKFKRRQSRLGGTSRRTESDTNKLSGRNGANTAR--------------------- 137
           ALRVE++ KRR +    +      +    S + G N+ R                     
Sbjct: 239 ALRVEQQIKRRSATRRNSPNTYNQNWANRSKKEGGNSFRPAATSPYGKSATPSVGGSKHN 298

Query: 138 -NEQRYKTGF-NGRCHRCREFGHRVIECPHEHIERRTTLVRXXXXXXXXXXXXXXXXXXX 311
            +     TG  N +C +C   GH   ECP     RRT +++                   
Sbjct: 299 TSTSSSNTGTRNIKCFKCLGRGHIASECP----TRRTMIMKADGEITSESEISEEEVEEE 354

Query: 312 XXXDT--QAPRRMVIRSLMARSE--EDIRRKQLFCVRGKLNGIDGTIMVDSGSQENVVSE 479
              +   Q    MV R L  + +  +D +R+ +F  R  +NG   +++VD GS  NV S 
Sbjct: 355 EYEEEAMQGDMLMVRRLLGNQMQPLDDNQRENIFHTRCVINGKLCSLIVDGGSCTNVASS 414

Query: 480 EFVKTRSISTTKHPKPYRVSWLRTDQHVNVEERAKIKIGIGPYNTTIECDVLPMDAC*VL 659
             V   ++ T  HP+PY++ WL  D+ V V ++ ++ + IG YN  + CDV+PM+A  VL
Sbjct: 415 TLVTKLNLETKPHPRPYKLQWLSEDEEVKVTQQVEVCLTIGRYNDKVLCDVVPMEATHVL 474

Query: 660 LGRPWQYDANAIHD 701
           LGRPWQYD  A+HD
Sbjct: 475 LGRPWQYDTKAVHD 488


>ref|XP_006607055.1| PREDICTED: uncharacterized protein LOC100778333, partial [Glycine
           max]
          Length = 560

 Score =  111 bits (277), Expect = 3e-22
 Identities = 81/255 (31%), Positives = 120/255 (47%), Gaps = 28/255 (10%)
 Frame = +3

Query: 21  ALRVEEKFKRR-----------------QSRLGGTSRRT-------ESDTNKLSGRNGAN 128
           ALRVE++ KR+                 +S+ GG S R        +S T  + G    N
Sbjct: 239 ALRVEQQIKRKSATRRNSPNTYNQNWANRSKEGGNSFRPAATSPHGKSATPSVGGSKH-N 297

Query: 129 TARNEQRYKTGFNGRCHRCREFGHRVIECPHEHIERRTTLVRXXXXXXXXXXXXXXXXXX 308
           T+ +     T  N +C +C   GH   ECP     RRT +++                  
Sbjct: 298 TSTSSSNTGTR-NIKCFKCLGRGHIASECP----TRRTMIMKVDGEITSESEISEEEVEE 352

Query: 309 XXXXDT--QAPRRMVIRSLMARSE--EDIRRKQLFCVRGKLNGIDGTIMVDSGSQENVVS 476
               +   Q    MV R L  + +  +D +R+ +F  R  +NG   +++VD GS  NV S
Sbjct: 353 EEYEEEAMQGDMLMVRRLLGNQMQPLDDNQRENIFHTRCVINGKLCSLIVDGGSCTNVAS 412

Query: 477 EEFVKTRSISTTKHPKPYRVSWLRTDQHVNVEERAKIKIGIGPYNTTIECDVLPMDAC*V 656
              V   ++ T  HP PY++ WL  D+ V V ++ ++ + IG YN  + CDV+PM+A  V
Sbjct: 413 STLVTKLNLETKPHPTPYKLQWLSEDEEVKVTQQVEVCLTIGRYNDKVLCDVVPMEATHV 472

Query: 657 LLGRPWQYDANAIHD 701
           LLGRPWQYD  A+HD
Sbjct: 473 LLGRPWQYDTKAVHD 487


>gb|EOX96724.1| Gag-pol polyprotein, putative [Theobroma cacao]
          Length = 794

 Score =  111 bits (277), Expect = 3e-22
 Identities = 75/253 (29%), Positives = 116/253 (45%), Gaps = 21/253 (8%)
 Frame = +3

Query: 6   EAYQCALRVEEKFKRRQSRLGGTSRRTESDTNKLSGR-----------NGANTARNEQRY 152
           +  + AL+VE++  R+ S    +SR+ +S +N+  GR           N + T  +++  
Sbjct: 232 DVIRLALKVEKQQLRKSSM--SSSRQKDSTSNR--GRQSSATIPPPKVNSSKTINHKETT 287

Query: 153 KT---GFNGRCHRCREFGHRVIECPHEHIER--RTTLVRXXXXXXXXXXXXXXXXXXXXX 317
            T     N +C +C+ FGH   +CP+  I       ++                      
Sbjct: 288 STRAPNVNKKCFKCQGFGHIASDCPNRRIISLIEEEVMEEPSLEEVDDELEIFNNEEIEE 347

Query: 318 XDTQAPRRMVIR----SLMARSEEDIRRKQLFCVRGKLNGIDGTIMVDSGSQENVVSEEF 485
                   +V+R    + M   +E   R  +F  R    G    +++DSGS ENV++   
Sbjct: 348 VSADHGEALVVRRNLNTAMLTEDESWLRHNIFHTRCTSQGKVCNVIIDSGSCENVIANYM 407

Query: 486 VKTRSISTTKHPKPYRVSWLRTDQHVNVEERAKIKIGIG-PYNTTIECDVLPMDAC*VLL 662
           VK   + T  HP PY++ WLR    V V +R  ++  IG  Y   + CDV+PMDAC +LL
Sbjct: 408 VKKLKLQTEVHPHPYKLQWLRKGNEVKVTKRCCVQFSIGNKYEDEVWCDVIPMDACHLLL 467

Query: 663 GRPWQYDANAIHD 701
           GRPWQYD  A HD
Sbjct: 468 GRPWQYDRRAHHD 480


>ref|XP_006603400.1| PREDICTED: uncharacterized protein LOC102659640 [Glycine max]
          Length = 594

 Score =  110 bits (276), Expect = 3e-22
 Identities = 75/254 (29%), Positives = 116/254 (45%), Gaps = 27/254 (10%)
 Frame = +3

Query: 21  ALRVEEKFKRRQSRLGGTSRRTESDTNKLSGRNGANTAR--------------------- 137
           ALRVE++ KR+ +    +      +    S + G N+ R                     
Sbjct: 239 ALRVEQQIKRKSATRRNSPNTYNQNWANRSKKEGGNSFRPAATSPYGKSATPSVGGSKHN 298

Query: 138 -NEQRYKTGF-NGRCHRCREFGHRVIECPHEHIERRTTLVRXXXXXXXXXXXXXXXXXXX 311
            +     TG  N +C +C   GH   ECP     RRT +++                   
Sbjct: 299 TSTSSSNTGTRNIKCFKCLGRGHIASECP----TRRTMIMKADGEITSESEISEEEVEEE 354

Query: 312 XXXDT--QAPRRMVIRSLMARSE--EDIRRKQLFCVRGKLNGIDGTIMVDSGSQENVVSE 479
              +   Q    MV R L  + +  +D +R+ +F  R  +NG   +++VD GS  NV S 
Sbjct: 355 EYEEEAMQGDMLMVRRLLGNQMQPLDDNQRENIFHTRCVINGKLCSLIVDGGSCTNVASS 414

Query: 480 EFVKTRSISTTKHPKPYRVSWLRTDQHVNVEERAKIKIGIGPYNTTIECDVLPMDAC*VL 659
             V   ++ T  HP+PY++ WL  D+ + V ++ ++ + IG YN  + CDV+PM+A  VL
Sbjct: 415 TLVTKLNLETKPHPRPYKLQWLSEDEEIKVTQQVEVCLTIGRYNDKVLCDVVPMEATHVL 474

Query: 660 LGRPWQYDANAIHD 701
           LGRPWQYD  A+HD
Sbjct: 475 LGRPWQYDTKAVHD 488


>ref|XP_006605097.1| PREDICTED: uncharacterized protein LOC100803456 [Glycine max]
          Length = 732

 Score =  106 bits (264), Expect = 8e-21
 Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 5/230 (2%)
 Frame = +3

Query: 27  RVEEKFKRRQSRLGGTSRRTESDTNKLSGRNGANTARNEQRYKTGFNGRCHRCREFGHRV 206
           R +E FK+  +    T R T   T    G+  AN +R+          +C +C   GH  
Sbjct: 131 RWKEGFKKEGTSSNRTLRATPQSTQN-RGKEVANNSRSRDI-------KCFKCLGRGHIA 182

Query: 207 IECPHEHIERRTTLVRXXXXXXXXXXXXXXXXXXXXXXDTQAPRR--MVIRSLM---ARS 371
            ECP     ++  +++                      + + P     ++R ++   A+ 
Sbjct: 183 SECP----TKKVMILKDDGEITSENSPSEPSSEEERALEEEIPEGDLFIVRRILGGIAKK 238

Query: 372 EEDIRRKQLFCVRGKLNGIDGTIMVDSGSQENVVSEEFVKTRSISTTKHPKPYRVSWLRT 551
            E+ +R+ +F     + G   ++++D GS  NVVS   VK  ++ T  HP+PY++ WL  
Sbjct: 239 SEESQRENIFHTTCLIQGRVCSLIIDGGSCTNVVSARLVKKMNLETKPHPRPYKLQWLSE 298

Query: 552 DQHVNVEERAKIKIGIGPYNTTIECDVLPMDAC*VLLGRPWQYDANAIHD 701
           +  + V+++ +I+  IG Y     CDV+PM+A  VLLGRPWQ+D  A HD
Sbjct: 299 EGELRVDKQVEIQFSIGKYKDKTLCDVVPMEASHVLLGRPWQFDRKAHHD 348


>gb|EOY18660.1| Uncharacterized protein TCM_043155 [Theobroma cacao]
          Length = 625

 Score =  105 bits (263), Expect = 1e-20
 Identities = 76/252 (30%), Positives = 113/252 (44%), Gaps = 20/252 (7%)
 Frame = +3

Query: 6   EAYQCALRVEEKFKRRQSRLGGTSRRTESDTNKLSGR---------NGANTARNEQRYKT 158
           +  +  L+VE++  R++S    +SR+ ES +N  S           N + TA +  +  T
Sbjct: 201 DVIRLTLKVEKQQSRKRSM--SSSRQQESISNDESQSSVTIPPPKVNSSKTASSNDKETT 258

Query: 159 -----GFNGRCHRCREFGHRVIECPHEHI-----ERRTTLVRXXXXXXXXXXXXXXXXXX 308
                  N +C +C+ FGH   +CP   I     E                         
Sbjct: 259 FTRASNVNKKCFKCQRFGHIASDCPSRRIISLVEEEDYVNWEKLEPVYDEYDDEEIEEVS 318

Query: 309 XXXXDTQAPRRMVIRSLMARSEEDIRRKQLFCVRGKLNGIDGTIMVDSGSQENVVSEEFV 488
               +    RR +  +LM + E  +R   +F  R    G    +++DSGS ENVV+   V
Sbjct: 319 ADHGEAFIVRRNLNTALMTKDESCLRHN-IFYTRCTSQGNVCNVIIDSGSCENVVANYMV 377

Query: 489 KTRSISTTKHPKPYRVSWLRTDQHVNVEERAKIKIGI-GPYNTTIECDVLPMDAC*VLLG 665
           +   + T  HP PY++ WLR    V V +R  I+  I   Y   + CDV+PMDAC +LLG
Sbjct: 378 EKLKLPTEVHPHPYKLQWLRKGNEVKVTKRCCIQFFIRNKYEDEVWCDVIPMDACHLLLG 437

Query: 666 RPWQYDANAIHD 701
           RPWQYD  A +D
Sbjct: 438 RPWQYDRRAHYD 449


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  105 bits (263), Expect = 1e-20
 Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
 Frame = +3

Query: 126 NTARNEQRYKTGFNGR-----CHRCREFGHRVIECPHEHIERRTTLVRXXXXXXXXXXXX 290
           N  R +++++ G   +     C+RC+  GH   ECP+      T                
Sbjct: 296 NNQREKEKFQEGSKQKVSTVTCYRCQGRGHYARECPNTKKILTTGKDEREYMSANESDDE 355

Query: 291 XXXXXXXXXXDTQAPRRM--------------VIRSLMARSEEDIRRKQLFCVRGKLNGI 428
                     D  +   +               + +L+   +E+ +R+ +F  + K+ G 
Sbjct: 356 ELEPIGERQKDDHSEEEVQEDDALHFNCVVHKALSTLVVLDQEE-QRENIFYGKCKIPGA 414

Query: 429 DGTIMVDSGSQENVVSEEFVKTRSISTTKHPKPYRVSWLRTDQHVNVEERAKIKIGIGPY 608
             + ++D GS  NV+SE+ V    I T +HP+PY++ WL  D  + V ++A I I IG Y
Sbjct: 415 TCSFIIDGGSCTNVISEDVVNAMKIPTIQHPQPYKLQWLNDDGELKVHKQALISISIGKY 474

Query: 609 NTTIECDVLPMDAC*VLLGRPWQYDANAIH 698
              + CDV+PM AC +LLGRPWQYD + +H
Sbjct: 475 QDDVLCDVIPMHACHILLGRPWQYDRDTLH 504


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score =  105 bits (262), Expect = 1e-20
 Identities = 72/242 (29%), Positives = 115/242 (47%), Gaps = 15/242 (6%)
 Frame = +3

Query: 21  ALRVEEKFKRR-QSRLGGTSRRTES--DTNKLSGRNGANTARNEQRYKTGFNG------- 170
           A++VE++ KR+ Q+R   T+  ++S  D  K  G + +  A  E + KT  +        
Sbjct: 231 AIKVEQQLKRKSQARRNSTTFNSQSWKDKTKKEGASSSKEATVENKGKTITSSSSSVSTN 290

Query: 171 ---RCHRCREFGHRVIECPHEHIERRTTLVRXXXXXXXXXXXXXXXXXXXXXX--DTQAP 335
              +C +C+  GH   +CP     +RT L+                         D    
Sbjct: 291 KSVKCFKCQGQGHIASQCP----TKRTMLMEENEEIVEEEDGDYDKEFGEEIPSGDLLMV 346

Query: 336 RRMVIRSLMARSEEDIRRKQLFCVRGKLNGIDGTIMVDSGSQENVVSEEFVKTRSISTTK 515
           RRM+   +  + E+  +R+ LF +R  + G   ++++D GS  NV S   V    + T  
Sbjct: 347 RRMLGSQI--KEEDTSQRENLFHIRCFVQGKVCSLIIDGGSCTNVASTRLVSRLKLETKP 404

Query: 516 HPKPYRVSWLRTDQHVNVEERAKIKIGIGPYNTTIECDVLPMDAC*VLLGRPWQYDANAI 695
           HPKPY++ WL     + V ++ +I   IG Y   + CDV+PM+A  +LLGRPWQ+D  A 
Sbjct: 405 HPKPYKLQWLNESVEMLVNKQVEICFKIGKYEDVVLCDVVPMEASHLLLGRPWQFDRKAN 464

Query: 696 HD 701
           HD
Sbjct: 465 HD 466


>ref|XP_004980437.1| PREDICTED: uncharacterized protein LOC101781709 [Setaria italica]
          Length = 1055

 Score =  104 bits (260), Expect = 2e-20
 Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 9/185 (4%)
 Frame = +3

Query: 171 RCHRCREFGHRVIECPHEHIERRT------TLVRXXXXXXXXXXXXXXXXXXXXXXDTQA 332
           +CHRC+ FGH   ECP +     T      +                         DT A
Sbjct: 394 QCHRCKGFGHVQKECPSQRAYIATEDGGYISTSDIEDDVDEEIAAEDTEGHVLRGADTSA 453

Query: 333 PRRMVIRSLMA---RSEEDIRRKQLFCVRGKLNGIDGTIMVDSGSQENVVSEEFVKTRSI 503
              ++++ +++   +  E ++R  LF     +N     +++D GS  N+VS + VK   +
Sbjct: 454 YMNIIVQRVLSTQIQQPESLQRHNLFQTFFVINNRRARVIIDGGSCNNLVSSDLVKKLGL 513

Query: 504 STTKHPKPYRVSWLRTDQHVNVEERAKIKIGIGPYNTTIECDVLPMDAC*VLLGRPWQYD 683
           ST  HP PY + WL       V +  ++   IG Y   ++CDV+PM AC +LLGRPW++D
Sbjct: 514 STRPHPHPYHIQWLNDSGKAKVTQTCRVSFSIGAYADFVDCDVVPMQACSLLLGRPWEHD 573

Query: 684 ANAIH 698
            +A H
Sbjct: 574 NDATH 578


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  104 bits (260), Expect = 2e-20
 Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 9/225 (4%)
 Frame = +3

Query: 51   RQSRLGGTSRRTESDTNKLSGRNGANTARNEQRYKTGFNG-RCHRCREFGHRVIECPHEH 227
            R S  G +S +  +  N+   +N ANT+       T  +G +C +C   GH   ECP+  
Sbjct: 348  RSSNYGTSSGKDLAAPNER--KNAANTSSTSVGSSTKSSGIQCFKCGGRGHVARECPNN- 404

Query: 228  IERRTTLVRXXXXXXXXXXXXXXXXXXXXXXDT-----QAPRRMVIRSLMARSEEDI--- 383
               RT +V                       +      ++   +V+  +++    D    
Sbjct: 405  ---RTIVVNDQGEYESTSEEEQEDSEEENNLEKDICEFESGAALVVTQILSVQMSDAENG 461

Query: 384  RRKQLFCVRGKLNGIDGTIMVDSGSQENVVSEEFVKTRSISTTKHPKPYRVSWLRTDQHV 563
            +R  LF  R K+      +++D GS  N+ S+E V+   +   KHP PY V WL     +
Sbjct: 462  QRHNLFQTRAKVQDKVVKVIIDGGSCHNLASKEMVEKLGLKLLKHPHPYHVQWLNNSGSI 521

Query: 564  NVEERAKIKIGIGPYNTTIECDVLPMDAC*VLLGRPWQYDANAIH 698
             + +R K+   IG Y  T+ECDV PM  C +LLGRPWQYD +++H
Sbjct: 522  KIAQRVKVPFKIGEYIDTMECDVAPMTVCHMLLGRPWQYDRSSLH 566


>gb|AAQ72729.1| putative gag-pol polyprotein [Petunia x hybrida]
          Length = 803

 Score =  104 bits (260), Expect = 2e-20
 Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
 Frame = +3

Query: 117 NGANTARNEQRYKTGFNGRCHRCREFGHRVIECPH--------EHIERRTTLVRXXXXXX 272
           N    ++ +    T  + +CH+C+ +GH   ECP         EH   + +         
Sbjct: 363 NAGGNSKTQLNTPTSSSIQCHKCKGYGHFAKECPTKRTMVVVVEHAYEQESEPEEDEGVE 422

Query: 273 XXXXXXXXXXXXXXXXDTQAPRRMVIRSLMARSEED---IRRKQLFCVRGKLNGIDGTIM 443
                           +      +V RSL A   ED   ++R+ LF  R ++ G+  +++
Sbjct: 423 GDEGVEEDGEDDTVEDEEPHTFLVVRRSLGAMIAEDGETLQRENLFHARCRVKGVVCSMI 482

Query: 444 VDSGSQENVVSEEFVKTRSISTTKHPKPYRVSWLRTDQHVNVEERAKIKIGIGPYNTTIE 623
           +DSGS  NVVS+  +    + T KHPKPYR+ WL     + V ++A IK  +G Y     
Sbjct: 483 IDSGSCTNVVSQSLITQLKLPTMKHPKPYRLQWLSECGELKVVKQAMIKFKMGSYVDEHL 542

Query: 624 CDVLPMDAC*VLLGRPWQYDANAIHD 701
            DV+PM AC +L GRPWQ+D   +H+
Sbjct: 543 FDVVPMQACHLLFGRPWQFDRQVVHN 568


>gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 572

 Score =  103 bits (257), Expect = 5e-20
 Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 15/242 (6%)
 Frame = +3

Query: 21  ALRVEEKFKRR-QSRLGGTSRRTES--DTNKLSGRNGANTARNEQRYKTGFNG------- 170
           A++VE++ KR+ Q+R   T+  ++S  D  K  G + +  A  E + KT  +        
Sbjct: 231 AIKVEQQLKRKSQARRNSTTFNSQSWKDKTKKEGASSSKEATVENKGKTITSSSSSVSTN 290

Query: 171 ---RCHRCREFGHRVIECPHEHIERRTTLVRXXXXXXXXXXXXXXXXXXXXXX--DTQAP 335
              +C +C+  GH   +CP     +RT L+                         D    
Sbjct: 291 KSVKCFKCQGQGHIASQCP----TKRTMLMEENEGIVEEEDGDYDEEFEEEIPSGDLLMV 346

Query: 336 RRMVIRSLMARSEEDIRRKQLFCVRGKLNGIDGTIMVDSGSQENVVSEEFVKTRSISTTK 515
           RRM+   +  + E+  +R+ LF  R  + G   ++++D GS  NV S   V    + T  
Sbjct: 347 RRMLGSQI--KEEDTGQRENLFHTRCFVQGKVCSLIIDGGSCTNVASTRLVSKLKLETKP 404

Query: 516 HPKPYRVSWLRTDQHVNVEERAKIKIGIGPYNTTIECDVLPMDAC*VLLGRPWQYDANAI 695
           HPKPY++ WL     + V ++ +I   IG Y   + CDV+PM+A  +LLGRPWQ+D  A 
Sbjct: 405 HPKPYKLQWLNESVEMLVNKQVEICFKIGKYEDVVLCDVVPMEASHLLLGRPWQFDRKAN 464

Query: 696 HD 701
           HD
Sbjct: 465 HD 466


>ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594328 [Solanum tuberosum]
          Length = 1191

 Score =  101 bits (251), Expect = 3e-19
 Identities = 70/220 (31%), Positives = 96/220 (43%), Gaps = 8/220 (3%)
 Frame = +3

Query: 66  GGTSRRTESDTNKLSGRNGANTARNEQRYKTGFNGRCHRCREFGHRVIECPHEHIERRTT 245
           G    + + D  K     G  T  N +  K   + +CH+C   GH + ECP     RR  
Sbjct: 335 GKAPSKPQDDRGKGKVEEGGKTF-NPKSSKPSSSIQCHKCHGRGHMMHECP----SRRNI 389

Query: 246 LVRXXXXXXXXXXXXXXXXXXXXXX--DTQAPRRMVI---RSLMA---RSEEDIRRKQLF 401
           L+R                        D + P   +I   R +M     S ++ +R+ LF
Sbjct: 390 LLRENGEYESEKSEGEEEEREGVSEEDDLELPNDGIIGVVRRIMTINLGSVDEGQRENLF 449

Query: 402 CVRGKLNGIDGTIMVDSGSQENVVSEEFVKTRSISTTKHPKPYRVSWLRTDQHVNVEERA 581
             R  + G   ++++D GS  NVVS   V    I+  K P PYR+ WL     V V ++ 
Sbjct: 450 HTRCGIKGKTYSMIIDGGSCANVVSSYLVDKLGIACMKRPTPYRLQWLNDCGEVKVNKQC 509

Query: 582 KIKIGIGPYNTTIECDVLPMDAC*VLLGRPWQYDANAIHD 701
            I   +G Y   I CDV+PM AC VLLGRPWQYD     D
Sbjct: 510 MISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRQNFED 549


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 99.8 bits (247), Expect = 8e-19
 Identities = 69/219 (31%), Positives = 96/219 (43%), Gaps = 8/219 (3%)
 Frame = +3

Query: 66  GGTSRRTESDTNKLSGRNGANTARNEQRYKTGFNGRCHRCREFGHRVIECPHEHIERRTT 245
           G    + + D  K     G  T  N +  K   + +CH+C   GH + ECP     RR  
Sbjct: 309 GKAPSKPQDDRGKGKVEKGGKTF-NPKSSKPSSSIQCHKCHGRGHMMHECP----SRRNI 363

Query: 246 LVRXXXXXXXXXXXXXXXXXXXXXX--DTQAPRRMVI---RSLMA---RSEEDIRRKQLF 401
           L+R                        D + P   +I   R +M     S ++ +R+ LF
Sbjct: 364 LLRENGEYESEKSEREEEEGEGVSEEDDLELPNDGIIGVVRRIMTINLGSVDEGQRENLF 423

Query: 402 CVRGKLNGIDGTIMVDSGSQENVVSEEFVKTRSISTTKHPKPYRVSWLRTDQHVNVEERA 581
             R  + G   ++++D GS  NVVS   V    I+  K   PYR+ WL     V V ++ 
Sbjct: 424 HTRCGIKGKTYSMIIDGGSCANVVSSYLVDKLGIACMKRSTPYRLQWLNDCGEVQVNKQC 483

Query: 582 KIKIGIGPYNTTIECDVLPMDAC*VLLGRPWQYDANAIH 698
            I   +G Y   I CDV+PM AC VLLGRPWQYD +  H
Sbjct: 484 MISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDTTH 522


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 99.8 bits (247), Expect = 8e-19
 Identities = 69/219 (31%), Positives = 96/219 (43%), Gaps = 8/219 (3%)
 Frame = +3

Query: 66  GGTSRRTESDTNKLSGRNGANTARNEQRYKTGFNGRCHRCREFGHRVIECPHEHIERRTT 245
           G    + + D  K     G  T  N +  K   + +CH+C   GH + ECP     RR  
Sbjct: 309 GKAPSKPQDDRGKGKVEKGGKTF-NPKSSKPSSSIQCHKCHGRGHMMHECP----SRRNI 363

Query: 246 LVRXXXXXXXXXXXXXXXXXXXXXX--DTQAPRRMVI---RSLMA---RSEEDIRRKQLF 401
           L+R                        D + P   +I   R +M     S ++ +R+ LF
Sbjct: 364 LLRENGEYESEKSEREEEEGEGVSEEDDLELPNDGIIGVVRRIMTINLGSVDEGQRENLF 423

Query: 402 CVRGKLNGIDGTIMVDSGSQENVVSEEFVKTRSISTTKHPKPYRVSWLRTDQHVNVEERA 581
             R  + G   ++++D GS  NVVS   V    I+  K   PYR+ WL     V V ++ 
Sbjct: 424 HTRCGIKGKTYSMIIDGGSCANVVSSYLVDKLGIACMKRSTPYRLQWLNDCGEVQVNKQC 483

Query: 582 KIKIGIGPYNTTIECDVLPMDAC*VLLGRPWQYDANAIH 698
            I   +G Y   I CDV+PM AC VLLGRPWQYD +  H
Sbjct: 484 MISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDTTH 522


>gb|ABA96215.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 767

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 62/193 (32%), Positives = 83/193 (43%), Gaps = 17/193 (8%)
 Frame = +3

Query: 174 CHRCREFGHRVIECPHEHI---------------ERRTTLVRXXXXXXXXXXXXXXXXXX 308
           CHRC   GH   +CP+                  +    L                    
Sbjct: 372 CHRCHGIGHIARDCPNRRALFVNADGEYTSASDCDDEYALAATDHAGGQDDEDIEEVHLH 431

Query: 309 XXXXDTQAPRRMVIRSLMARS--EEDIRRKQLFCVRGKLNGIDGTIMVDSGSQENVVSEE 482
               D Q P  +V  +L A+   EE  +R  LF  +  + G    +++DSGS  N+ SEE
Sbjct: 432 PESLD-QYPSLIVKLALSAKEKCEEQNQRHNLFQSKVLVKGHTVKMIIDSGSCNNLASEE 490

Query: 483 FVKTRSISTTKHPKPYRVSWLRTDQHVNVEERAKIKIGIGPYNTTIECDVLPMDAC*VLL 662
            VK   ++T  HP PY + W  T   + V    KI   IG Y+  IECDV+ M AC V+L
Sbjct: 491 MVKKLGLTTHPHPHPYHIQWFNTCGKMKVTRLVKIPFSIGSYHDQIECDVVHMQACSVIL 550

Query: 663 GRPWQYDANAIHD 701
           GRPWQYD   + D
Sbjct: 551 GRPWQYDREVVFD 563


>gb|ABA91262.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 767

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 62/193 (32%), Positives = 83/193 (43%), Gaps = 17/193 (8%)
 Frame = +3

Query: 174 CHRCREFGHRVIECPHEHI---------------ERRTTLVRXXXXXXXXXXXXXXXXXX 308
           CHRC   GH   +CP+                  +    L                    
Sbjct: 372 CHRCHGIGHIARDCPNRRALFVNADGEYTSASDCDDEYALAATDHAGGQDDEDIEEVHLH 431

Query: 309 XXXXDTQAPRRMVIRSLMARS--EEDIRRKQLFCVRGKLNGIDGTIMVDSGSQENVVSEE 482
               D Q P  +V  +L A+   EE  +R  LF  +  + G    +++DSGS  N+ SEE
Sbjct: 432 PESLD-QYPSLIVKLALSAKEKCEEQNQRHNLFQSKVLVKGHTVKMIIDSGSCNNLASEE 490

Query: 483 FVKTRSISTTKHPKPYRVSWLRTDQHVNVEERAKIKIGIGPYNTTIECDVLPMDAC*VLL 662
            VK   ++T  HP PY + W  T   + V    KI   IG Y+  IECDV+ M AC V+L
Sbjct: 491 MVKKLGLTTHPHPHPYHIQWFHTCGKMKVTRLVKIPFSIGSYHDQIECDVVHMQACSVIL 550

Query: 663 GRPWQYDANAIHD 701
           GRPWQYD   + D
Sbjct: 551 GRPWQYDREVVFD 563


>ref|XP_004972012.1| PREDICTED: uncharacterized protein LOC101779105, partial [Setaria
           italica]
          Length = 867

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 46/125 (36%), Positives = 75/125 (60%)
 Frame = +3

Query: 324 TQAPRRMVIRSLMARSEEDIRRKQLFCVRGKLNGIDGTIMVDSGSQENVVSEEFVKTRSI 503
           T A  + V+ + +A SE++ +R  LF  +G +      I++DSGS  N+ S   V+  S+
Sbjct: 409 TAAVVQRVLSTQVAPSEKN-QRHTLFHTKGVVQERSIRIIIDSGSCNNLASTTLVEKLSL 467

Query: 504 STTKHPKPYRVSWLRTDQHVNVEERAKIKIGIGPYNTTIECDVLPMDAC*VLLGRPWQYD 683
            T KHP PY + WL     + +    ++   +G Y+  ++CDV+PM+AC +LLGRPWQYD
Sbjct: 468 PTRKHPYPYHIQWLNDGGKIRITRSVRVPFSMGAYSDFVDCDVIPMEACSLLLGRPWQYD 527

Query: 684 ANAIH 698
            +++H
Sbjct: 528 TDSLH 532