BLASTX nr result
ID: Ephedra25_contig00017439
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00017439
(536 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193761.1| TBP-associated factor 11 [Arabidopsis thaliana]... 64 3e-08
emb|CAA18253.1| putative protein [Arabidopsis thaliana] gi|72688... 62 8e-08
ref|XP_006859071.1| hypothetical protein AMTR_s00068p00201090 [A... 61 2e-07
ref|XP_006285330.1| hypothetical protein CARUB_v10006719mg [Caps... 61 2e-07
ref|XP_002869942.1| predicted protein [Arabidopsis lyrata subsp.... 59 5e-07
ref|XP_006348624.1| PREDICTED: transcription initiation factor T... 58 1e-06
ref|XP_006413886.1| hypothetical protein EUTSA_v10026240mg [Eutr... 58 1e-06
ref|XP_004239262.1| PREDICTED: uncharacterized protein LOC101263... 57 2e-06
gb|AFK44701.1| unknown [Medicago truncatula] 57 2e-06
gb|AFK33824.1| unknown [Medicago truncatula] 57 2e-06
ref|XP_004239004.1| PREDICTED: uncharacterized protein LOC101252... 57 3e-06
gb|EOY32429.1| Transcription initiation factor TFIID subunit 11 ... 56 6e-06
gb|EOY32428.1| Transcription initiation factor TFIID subunit 11 ... 56 6e-06
gb|EOY32427.1| Transcription initiation factor TFIID subunit 11 ... 56 6e-06
gb|ACJ84571.1| unknown [Medicago truncatula] 55 8e-06
>ref|NP_193761.1| TBP-associated factor 11 [Arabidopsis thaliana]
gi|75264738|sp|Q9M565.1|TAF11_ARATH RecName:
Full=Transcription initiation factor TFIID subunit 11;
AltName: Full=TBP-associated factor 11; Short=AtTAF11
gi|7638155|gb|AAF65405.1|AF238326_1 putative TATA
binding protein associated factor 24kDa subunit
[Arabidopsis thaliana]
gi|13877757|gb|AAK43956.1|AF370141_1 unknown protein
[Arabidopsis thaliana] gi|15293301|gb|AAK93761.1|
unknown protein [Arabidopsis thaliana]
gi|39545902|gb|AAR28014.1| TAF11 [Arabidopsis thaliana]
gi|332658898|gb|AEE84298.1| TBP-associated factor 11
[Arabidopsis thaliana]
Length = 210
Score = 63.5 bits (153), Expect = 3e-08
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Frame = +2
Query: 212 LEDTSTRSPDYKDGNGHGHGKGVTSPTASPNNSDDDYDEGISEPNTTQPPPPDIDATEPK 391
+E+ SP G G G G + + D+ + + + + TE K
Sbjct: 12 IEEEQEESPPESPVGGGGGGDGSEDGRIEIDQTQDEDERPVDVRRPMKKAKTSVVVTEAK 71
Query: 392 ASKGDED-----ENMDAELSKY-NAENPNKIERFATILAQLTPDQMNRYESFRR 535
DED ENMD EL+KY + +P K+ + TIL+Q T DQM+RYESFRR
Sbjct: 72 NKDKDEDDEEEEENMDVELTKYPTSSDPAKMAKMQTILSQFTEDQMSRYESFRR 125
>emb|CAA18253.1| putative protein [Arabidopsis thaliana] gi|7268823|emb|CAB79028.1|
putative protein [Arabidopsis thaliana]
Length = 221
Score = 62.0 bits (149), Expect = 8e-08
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Frame = +2
Query: 212 LEDTSTRSPDYKDGNGHGHGKGVTSPTASPNNSDDDYDEGISEPNTTQPPPPDIDATEPK 391
+E+ SP G G G G + + D+ + + + + TE K
Sbjct: 12 IEEEQEESPPESPVGGGGGGDGSEDGRIEIDQTQDEDERPVDVRRPMKKAKTSVVVTEAK 71
Query: 392 ASKGDED-----ENMDAELSKY-NAENPNKIERFATILAQLTPDQMNRYESFRR 535
DED ENMD EL+KY + +P K+ + +IL+Q T DQM+RYESFRR
Sbjct: 72 NKDKDEDDEEEEENMDVELTKYPTSSDPAKMAKMQSILSQFTEDQMSRYESFRR 125
>ref|XP_006859071.1| hypothetical protein AMTR_s00068p00201090 [Amborella trichopoda]
gi|548863183|gb|ERN20538.1| hypothetical protein
AMTR_s00068p00201090 [Amborella trichopoda]
Length = 185
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/84 (38%), Positives = 49/84 (58%)
Frame = +2
Query: 284 SPTASPNNSDDDYDEGISEPNTTQPPPPDIDATEPKASKGDEDENMDAELSKYNAENPNK 463
SPT + + + D+G+S PP + + +E+ENMD EL K + +P+K
Sbjct: 21 SPTPAGEVAGNSDDDGVSRQVPANVPPTGKTREDEEE---EEEENMDVELGKLQSGDPDK 77
Query: 464 IERFATILAQLTPDQMNRYESFRR 535
+ + IL+QLT +QM+RYESFRR
Sbjct: 78 MAKMQAILSQLTEEQMSRYESFRR 101
>ref|XP_006285330.1| hypothetical protein CARUB_v10006719mg [Capsella rubella]
gi|482554035|gb|EOA18228.1| hypothetical protein
CARUB_v10006719mg [Capsella rubella]
Length = 208
Score = 60.8 bits (146), Expect = 2e-07
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Frame = +2
Query: 212 LEDTSTRSPDYKDGNGHGHGKGVTSPTASPNNSDDDYDEGISEPNTTQPPPPDIDATEPK 391
+E+ SP G G G G A + + ++ + + + + TE K
Sbjct: 12 IEEEQEESPPESPVGGGGGGDGSEEGRAEIDQTAEEDERPVDVRRPAKKSKTSVVVTESK 71
Query: 392 ASKGDEDE---NMDAELSKY-NAENPNKIERFATILAQLTPDQMNRYESFRR 535
DE+E NM+ EL+KY + +P K+ + TIL+Q T DQM+RYESFRR
Sbjct: 72 NKDEDEEEEEENMEVELTKYPTSADPAKMAKMQTILSQFTEDQMSRYESFRR 123
>ref|XP_002869942.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315778|gb|EFH46201.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 4/113 (3%)
Frame = +2
Query: 209 ELEDTSTRSPDYKDGNGHGHGKGVTSPTASPNNSDDDYDEGISEPNTTQPPPPDIDATEP 388
E E++ SP G G G G G + + ++ + + + + TE
Sbjct: 15 EQEESPPESP-VGGGGGAGGGDGSEEGRIEIDQTQEEDERPVDVRRPMKKAKTSVVVTEA 73
Query: 389 KASKGD---EDENMDAELSKY-NAENPNKIERFATILAQLTPDQMNRYESFRR 535
K D E+ENM+ EL+KY + +P K+ + TIL+Q T DQM+RYESFRR
Sbjct: 74 KNKDEDDEEEEENMEVELTKYPTSSDPAKMAKMQTILSQFTEDQMSRYESFRR 126
>ref|XP_006348624.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
isoform X1 [Solanum tuberosum]
gi|565363815|ref|XP_006348625.1| PREDICTED:
transcription initiation factor TFIID subunit 11-like
isoform X2 [Solanum tuberosum]
gi|565363817|ref|XP_006348626.1| PREDICTED:
transcription initiation factor TFIID subunit 11-like
isoform X3 [Solanum tuberosum]
Length = 210
Score = 58.2 bits (139), Expect = 1e-06
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Frame = +2
Query: 209 ELEDTSTRSPDYKDGNGHGHGKGVTSPTASPNNSDDDYDEGISEPNTTQPPPPDIDATEP 388
E +D+ SP D N G +G + N SDD + +P+T++ + P
Sbjct: 14 EQDDSPPESPAGTDEN-EGQDQGAVG--VNMNESDDVNTDSREKPSTSKATSVSVSTAGP 70
Query: 389 KASKGDEDE-----NMDAELSKYNAEN-PNKIERFATILAQLTPDQMNRYESFRR 535
+ +EDE +MD +L K ++ + P+K+ + +IL+Q T +QM+RYESFRR
Sbjct: 71 ISKPKEEDEEEEEESMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSRYESFRR 125
>ref|XP_006413886.1| hypothetical protein EUTSA_v10026240mg [Eutrema salsugineum]
gi|557115056|gb|ESQ55339.1| hypothetical protein
EUTSA_v10026240mg [Eutrema salsugineum]
Length = 210
Score = 58.2 bits (139), Expect = 1e-06
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = +2
Query: 209 ELEDTSTRSPDYKDGNGHGHGKGVTSPTASPNNSDDDYDEGISEPNTTQPPPPDI--DAT 382
E E++ SP G G G G G + + ++ + + + P + +A
Sbjct: 15 EQEESPPESP-VSGGGGGGGGDGSDEGRIEIDQTPEEDERDVGVRRQMKKPKTSVVSEAK 73
Query: 383 EPKASKGDEDENMDAELSKY-NAENPNKIERFATILAQLTPDQMNRYESFRR 535
+ +E+ENM+AEL+KY +P K+ + IL+Q T DQM+RYESFRR
Sbjct: 74 NKDDDEEEEEENMEAELTKYPTTADPAKMAKMQIILSQFTEDQMSRYESFRR 125
>ref|XP_004239262.1| PREDICTED: uncharacterized protein LOC101263908 [Solanum
lycopersicum]
Length = 210
Score = 57.4 bits (137), Expect = 2e-06
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Frame = +2
Query: 209 ELEDTSTRSPDYKDGN-GHGHGKGVTSPTASPNNSDDDYDEGISEPNTTQPPPPDIDATE 385
E +D+ SP D N G HG + + N DD + +P+T++ +
Sbjct: 14 EQDDSPPESPAGTDENEGQDHG----AVGVNMNEGDDVNTDSREKPSTSKATSVSVSTAG 69
Query: 386 PKASKGDEDE-----NMDAELSKYNAEN-PNKIERFATILAQLTPDQMNRYESFRR 535
P + +EDE +MD +L K ++ + P+K+ + +IL+Q T +QM+RYESFRR
Sbjct: 70 PISKPKEEDEEEEEESMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSRYESFRR 125
>gb|AFK44701.1| unknown [Medicago truncatula]
Length = 203
Score = 57.4 bits (137), Expect = 2e-06
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 20/104 (19%)
Frame = +2
Query: 284 SPTASPNNSDDDYDEGISEPNTT------------------QPPPPDIDATEPKASKGDE 409
SP SP ++ D D PN+T + P + T+ K + DE
Sbjct: 15 SPPESPIETEPDPDASTENPNSTNSSLPQSTLTHEEEHNHIKTPNSNNTITKHKDEEDDE 74
Query: 410 DE-NMDAELSKY-NAENPNKIERFATILAQLTPDQMNRYESFRR 535
+E NMD EL+K+ A +P+K+ + IL+Q T +QM+RYESFRR
Sbjct: 75 EEDNMDVELAKFPTAGDPHKMAKMQAILSQFTEEQMSRYESFRR 118
>gb|AFK33824.1| unknown [Medicago truncatula]
Length = 203
Score = 57.4 bits (137), Expect = 2e-06
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 20/104 (19%)
Frame = +2
Query: 284 SPTASPNNSDDDYDEGISEPNTT------------------QPPPPDIDATEPKASKGDE 409
SP SP ++ D D PN+T + P + T+ K + DE
Sbjct: 15 SPPESPIETEPDPDASTENPNSTNSSLPQSTLAHEEEHNHIKTPNSNNTITKHKDEEDDE 74
Query: 410 DE-NMDAELSKY-NAENPNKIERFATILAQLTPDQMNRYESFRR 535
+E NMD EL+K+ A +P+K+ + IL+Q T +QM+RYESFRR
Sbjct: 75 EEDNMDVELAKFPTAGDPHKMAKMQAILSQFTEEQMSRYESFRR 118
>ref|XP_004239004.1| PREDICTED: uncharacterized protein LOC101252686 [Solanum
lycopersicum]
Length = 210
Score = 56.6 bits (135), Expect = 3e-06
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Frame = +2
Query: 209 ELEDTSTRSPDYKDGNGHGHGKGVTSPTASPNNSDDDYDEGISEPNTTQPPPPDIDATEP 388
E +D+ SP D N G +G + N DD + +P+T++ + P
Sbjct: 14 EQDDSPPESPAGTDEN-EGQDQGAVG--VNMNEGDDVNTDSREKPSTSKATSVSVSTAGP 70
Query: 389 KASKGDEDE-----NMDAELSKYNAEN-PNKIERFATILAQLTPDQMNRYESFRR 535
+ +EDE +MD +L K ++ + P+K+ + +IL+Q T +QM+RYESFRR
Sbjct: 71 ISKPKEEDEEEEEESMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSRYESFRR 125
>gb|EOY32429.1| Transcription initiation factor TFIID subunit 11 isoform 3, partial
[Theobroma cacao]
Length = 174
Score = 55.8 bits (133), Expect = 6e-06
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 19/94 (20%)
Frame = +2
Query: 311 DDDYDE------GISEPNTTQPP---PPDIDATEPKASKG---------DEDENMDAELS 436
DDDYDE S P++ P P ++A A+ +E+EN+D EL
Sbjct: 47 DDDYDEIGTNTNNPSHPSSNSTPMLLTPSVNANVASAAAASKNKEYDDDEEEENVDVELG 106
Query: 437 KY-NAENPNKIERFATILAQLTPDQMNRYESFRR 535
K+ ++ +P K+ + IL+Q T DQM+RYESFRR
Sbjct: 107 KFPSSADPAKMAKMQAILSQFTEDQMSRYESFRR 140
>gb|EOY32428.1| Transcription initiation factor TFIID subunit 11 isoform 2
[Theobroma cacao]
Length = 191
Score = 55.8 bits (133), Expect = 6e-06
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 19/94 (20%)
Frame = +2
Query: 311 DDDYDE------GISEPNTTQPP---PPDIDATEPKASKG---------DEDENMDAELS 436
DDDYDE S P++ P P ++A A+ +E+EN+D EL
Sbjct: 47 DDDYDEIGTNTNNPSHPSSNSTPMLLTPSVNANVASAAAASKNKEYDDDEEEENVDVELG 106
Query: 437 KY-NAENPNKIERFATILAQLTPDQMNRYESFRR 535
K+ ++ +P K+ + IL+Q T DQM+RYESFRR
Sbjct: 107 KFPSSADPAKMAKMQAILSQFTEDQMSRYESFRR 140
>gb|EOY32427.1| Transcription initiation factor TFIID subunit 11 isoform 1
[Theobroma cacao]
Length = 225
Score = 55.8 bits (133), Expect = 6e-06
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 19/94 (20%)
Frame = +2
Query: 311 DDDYDE------GISEPNTTQPP---PPDIDATEPKASKG---------DEDENMDAELS 436
DDDYDE S P++ P P ++A A+ +E+EN+D EL
Sbjct: 47 DDDYDEIGTNTNNPSHPSSNSTPMLLTPSVNANVASAAAASKNKEYDDDEEEENVDVELG 106
Query: 437 KY-NAENPNKIERFATILAQLTPDQMNRYESFRR 535
K+ ++ +P K+ + IL+Q T DQM+RYESFRR
Sbjct: 107 KFPSSADPAKMAKMQAILSQFTEDQMSRYESFRR 140
>gb|ACJ84571.1| unknown [Medicago truncatula]
Length = 203
Score = 55.5 bits (132), Expect = 8e-06
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Frame = +2
Query: 290 TASPNNSDDDYDEGI----SEPNTTQPPPPDIDATEPKASKGDEDE-NMDAELSKY-NAE 451
T +PN+++ + E N + P + T+ K + DE+E NMD EL+K+ A
Sbjct: 31 TENPNSTNSSLPQSTLTHEEEHNHIKTPNSNNTITKHKDEEDDEEEDNMDVELAKFPTAG 90
Query: 452 NPNKIERFATILAQLTPDQMNRYESFRR 535
+P+K+ + IL+Q T +QM+RYESFRR
Sbjct: 91 DPHKMAKMQAILSQFTEEQMSRYESFRR 118