BLASTX nr result
ID: Ephedra25_contig00017285
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00017285
(1840 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006838087.1| hypothetical protein AMTR_s00106p00017820 [A... 424 e-116
gb|EOY32064.1| RNA polymerase II ctd phosphatase, putative isofo... 395 e-107
ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative ... 393 e-106
ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal doma... 389 e-105
gb|EMJ05544.1| hypothetical protein PRUPE_ppa005647mg [Prunus pe... 387 e-105
ref|XP_002324547.2| hypothetical protein POPTR_0018s11760g [Popu... 387 e-105
ref|XP_001781984.1| predicted protein [Physcomitrella patens] gi... 386 e-104
ref|XP_004962192.1| PREDICTED: RNA polymerase II C-terminal doma... 384 e-103
ref|XP_002437361.1| hypothetical protein SORBIDRAFT_10g025580 [S... 384 e-103
ref|XP_004242583.1| PREDICTED: RNA polymerase II C-terminal doma... 380 e-103
ref|XP_006343662.1| PREDICTED: RNA polymerase II C-terminal doma... 380 e-102
ref|XP_004242582.1| PREDICTED: RNA polymerase II C-terminal doma... 379 e-102
dbj|BAB08870.1| unnamed protein product [Arabidopsis thaliana] 377 e-102
ref|NP_001078764.1| C-terminal domain phosphatase-like 4 [Arabid... 377 e-102
ref|XP_004287124.1| PREDICTED: RNA polymerase II C-terminal doma... 376 e-101
ref|XP_006486243.1| PREDICTED: RNA polymerase II C-terminal doma... 375 e-101
ref|XP_002965594.1| hypothetical protein SELMODRAFT_167775 [Sela... 374 e-101
ref|XP_002324546.2| hypothetical protein POPTR_0018s11760g [Popu... 373 e-100
ref|XP_002864543.1| hypothetical protein ARALYDRAFT_332090 [Arab... 372 e-100
gb|EOY32065.1| RNA polymerase II ctd phosphatase, putative isofo... 369 2e-99
>ref|XP_006838087.1| hypothetical protein AMTR_s00106p00017820 [Amborella trichopoda]
gi|548840545|gb|ERN00656.1| hypothetical protein
AMTR_s00106p00017820 [Amborella trichopoda]
Length = 486
Score = 424 bits (1090), Expect = e-116
Identities = 222/472 (47%), Positives = 309/472 (65%), Gaps = 18/472 (3%)
Frame = +2
Query: 149 ELDSISNAS-ENHQDDDDQEFESSPD-----------IDFDSEDRPRIKRRKLYDNEESE 292
E D +SN+S E+ + D+D E + + D++ + RIKR K+ ++EE +
Sbjct: 22 ETDLLSNSSGESPERDEDILDEITSESVSERSAVWDSTDYEEIELERIKRPKICEDEEIK 81
Query: 293 EQLPI-----KIEDKPESSSARGCL-HPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIH 454
E ++++ ES+S + C HPG+ +CI+CG+ K D +++ V YIH
Sbjct: 82 ESQSSNANQGELDNFKESTSEKVCPPHPGFYKDMCIRCGEQKDDETVARKETAVAFNYIH 141
Query: 455 KEFELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXXNSARFIDVDPEEESYISSTYLV 634
K+ +L E+ARLR DLK++ +K NS R +DV PEEE+Y+++TYL
Sbjct: 142 KDLKLGAEEVARLRATDLKNLYRRRKLYLVLDLDHTLLNSTRLVDVSPEEEAYLNATYL- 200
Query: 635 GQRNVESESGDIGRTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMA 814
+ S +GD TL+KL +HM TKLRPFV FL+EAN M+EMY+YTMGERAYA +MA
Sbjct: 201 -NKETSSSNGDTSGTLFKLEPLHMLTKLRPFVRTFLKEANTMFEMYVYTMGERAYALEMA 259
Query: 815 KLLDPKGKFFADRIISSSDSTNRRQKDLDVVLGAESAVVILDDTEPVWPKHKSNLIVVER 994
KLLDP G +F R+IS DST R QK LDVVLG+E AVVILDDTE VW KHK NL+++ER
Sbjct: 260 KLLDPSGVYFGSRVISQGDSTVRHQKGLDVVLGSECAVVILDDTEHVWHKHKENLVLMER 319
Query: 995 YHFFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCF 1174
YHFF +SC QF+ KSL++ KRDE+ES+G L+ +L VL+ +HQ F+ + + F
Sbjct: 320 YHFFSSSCRQFNVHYKSLSELKRDESESDGMLASILNVLKHIHQMFY-----YQEVETDF 374
Query: 1175 DSRDVRLVLKEIRARILKDCKVVFSRVFPTQFRAETHHLWRLAEELGAICSTSLREDVTH 1354
+ DVR VLK I++ +LK C++VFSR+FPT + E LWR+AE+LGA CS L E VTH
Sbjct: 375 NGSDVRKVLKTIQSEVLKGCRLVFSRIFPTNYPVENQTLWRIAEQLGASCSKELDEAVTH 434
Query: 1355 VVSLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQSS 1510
VVSLD GT+K+RWA+Q LV+P W+EA+++ W+RQ ED+FP+ K+ S
Sbjct: 435 VVSLDLGTEKARWAIQRKKHLVNPGWLEATNYFWKRQPEDQFPIPSKNGGGS 486
>gb|EOY32064.1| RNA polymerase II ctd phosphatase, putative isoform 1 [Theobroma
cacao]
Length = 469
Score = 395 bits (1014), Expect = e-107
Identities = 224/461 (48%), Positives = 283/461 (61%), Gaps = 7/461 (1%)
Frame = +2
Query: 143 DFELDSISNASENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQLPIK-IED 319
D E D +N N DDD D DS+ R K KL D EES IED
Sbjct: 38 DVEADGDNNNDNNDDHDDDD--------DLDSQRNKRCKTEKLEDLEESRGSTSQGLIED 89
Query: 320 K----PESSSARG-CLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEI 484
K E S + C HPG +CI CGQ D +S V YIHK L + EI
Sbjct: 90 KIVIHAELSLKKDICTHPGSFGQMCILCGQRLDD------ESGVTFGYIHKGLRLGNDEI 143
Query: 485 ARLRKDDLKSVLSAKKXXXXXXXXXXXXNSARFIDVDPEEESYISSTYLVGQRNVESESG 664
RLR D+K++L KK NS + + + P+EE YL GQ +
Sbjct: 144 VRLRSTDMKNLLRHKKLYLVLDLDHTLLNSTQLMHLTPDEE------YLKGQSD---SLQ 194
Query: 665 DIGR-TLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKF 841
D+ R +L+ L MHM TKLRPFV FL+EA++M+EMYIYTMG+R YA +MAKLLDP+ ++
Sbjct: 195 DVSRGSLFMLDFMHMMTKLRPFVRTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPRREY 254
Query: 842 FADRIISSSDSTNRRQKDLDVVLGAESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCL 1021
F+DR+IS D T + QK LDVVLG ESAVVILDDTE W KHK NLI++ERYH+F +SC
Sbjct: 255 FSDRVISRDDGTQKHQKGLDVVLGQESAVVILDDTENAWMKHKDNLILMERYHYFASSCH 314
Query: 1022 QFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVL 1201
QF KSL+Q K DE+E +G L+ +L+ LR +H FFD + SRDVR VL
Sbjct: 315 QFGYKCKSLSQLKSDESEPDGALASVLKALRQIHHMFFDELDCN------LASRDVRQVL 368
Query: 1202 KEIRARILKDCKVVFSRVFPTQFRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTD 1381
K ++ +LK CK+VFS VFPT F AE+H LW++AE+LGA CST VTHVVS DAGT+
Sbjct: 369 KTVQEEVLKGCKIVFSHVFPTNFPAESHPLWKMAEQLGATCSTETDLSVTHVVSTDAGTE 428
Query: 1382 KSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQ 1504
KSRWAV+ FLVHP WIEA+++LWQ+Q E+ FPV++ +Q
Sbjct: 429 KSRWAVKEKKFLVHPRWIEATNYLWQKQPEENFPVSQGKNQ 469
>ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
gi|223534449|gb|EEF36151.1| RNA polymerase II ctd
phosphatase, putative [Ricinus communis]
Length = 478
Score = 393 bits (1010), Expect = e-106
Identities = 217/470 (46%), Positives = 295/470 (62%), Gaps = 18/470 (3%)
Frame = +2
Query: 137 LIDFELDSISNASEN-------------HQDDDDQEFESSPDIDFDSEDRP-RIKRRK-- 268
L+D ELDS S++S++ + D +++E E D D DS+ RIKR +
Sbjct: 23 LLDAELDSKSSSSDSSPKAIKHDDASDANDDVNEEEEEEESDSDDDSDIATNRIKRSRVE 82
Query: 269 -LYDNEESEEQLPIKIEDKPESSSAR-GCLHPGYMWGVCIKCGQNKPDSEENEQQSRVCL 442
L + E +E + ++ +SS++ C HPG +CI CG E +++ V
Sbjct: 83 TLENGENPKESTRVSLDQTLVASSSKVACTHPGSFGDMCILCG------ERLIEETGVTF 136
Query: 443 KYIHKEFELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXXNSARFIDVDPEEESYISS 622
YIHK L++ EI RLR D+K++L +K NS + + + EEE
Sbjct: 137 GYIHKGLRLANDEIVRLRNTDMKNLLRHRKLYLVLDLDHTLLNSTQLMHLTAEEE----- 191
Query: 623 TYLVGQRNVESESGDIGRTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYA 802
YL Q ++S +L+ + MHM TKLRPF+ FL+EA+QM+EMYIYTMG+RAYA
Sbjct: 192 -YLKSQ--IDSMQDVSNGSLFMVDFMHMMTKLRPFIRTFLKEASQMFEMYIYTMGDRAYA 248
Query: 803 EKMAKLLDPKGKFFADRIISSSDSTNRRQKDLDVVLGAESAVVILDDTEPVWPKHKSNLI 982
+MAK LDP ++F R+IS D T R QK LD+VLG ESAV+ILDDTE W KHK NLI
Sbjct: 249 LEMAKFLDPGREYFNARVISRDDGTQRHQKGLDIVLGQESAVLILDDTENAWTKHKDNLI 308
Query: 983 VVERYHFFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMS 1162
++ERYHFF +SC QF KSL+Q K DE ES+G L+ +L+VLR +H FFD + +
Sbjct: 309 LMERYHFFASSCRQFGFECKSLSQLKSDENESDGALASVLKVLRRIHHIFFDELED---- 364
Query: 1163 QFCFDSRDVRLVLKEIRARILKDCKVVFSRVFPTQFRAETHHLWRLAEELGAICSTSLRE 1342
D RDVR VL +R +LK CK+VFSRVFPTQF+A+ HHLW++AE+LGA CS +
Sbjct: 365 --AIDGRDVRQVLSTVRKDVLKGCKIVFSRVFPTQFQADNHHLWKMAEQLGATCSREVDP 422
Query: 1343 DVTHVVSLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVTK 1492
VTHVVS +AGT+KSRWA++ND FLVHP WIEA++++WQRQ E+ F V +
Sbjct: 423 SVTHVVSAEAGTEKSRWALKNDKFLVHPRWIEATNYMWQRQPEENFSVNQ 472
>ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Cucumis sativus]
Length = 452
Score = 389 bits (999), Expect = e-105
Identities = 208/438 (47%), Positives = 280/438 (63%), Gaps = 5/438 (1%)
Frame = +2
Query: 188 DDDDQEFESSPDIDFDSEDRP---RIKRRKLYDNEESEEQLPIKIEDKPES--SSARGCL 352
D D +SSPD + + ++ RIKRRK+ E SEE + ++E++ S + C
Sbjct: 24 DLDSHSSDSSPDEETEGDNNAESVRIKRRKVEKLENSEEDIMHEVEEQSLEVLSKQQLCS 83
Query: 353 HPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLRKDDLKSVLSAKK 532
HPG +CI CGQ +++S V YIHKE L++ EI R+R ++K +L KK
Sbjct: 84 HPGSFGNMCIICGQRL------DEESGVTFGYIHKELRLNNDEINRMRNKEMKELLQRKK 137
Query: 533 XXXXXXXXXXXXNSARFIDVDPEEESYISSTYLVGQRNVESESGDIGRTLYKLPSMHMWT 712
NS + EEE S T +S +L+ L S+H T
Sbjct: 138 LILVLDLDHTLLNSTELRYLTVEEEYLRSQT--------DSLDDVTKGSLFLLNSVHTMT 189
Query: 713 KLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRIISSSDSTNRRQK 892
KLRPFVH FL+EA++++EMYIYTMGER YA +MAKLLDPK ++F+ ++IS D T + QK
Sbjct: 190 KLRPFVHSFLKEASKLFEMYIYTMGERRYAFEMAKLLDPKKEYFSSKVISRDDGTQKHQK 249
Query: 893 DLDVVLGAESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGTKSLTQSKRDEA 1072
LDVVLG ESAV+ILDDTE W KHK NLI++ERYHFF +SC QF KSL++ K DE+
Sbjct: 250 GLDVVLGKESAVLILDDTENAWTKHKENLILMERYHFFASSCRQFGFNCKSLSELKNDES 309
Query: 1073 ESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIRARILKDCKVVFSR 1252
E++G L+ +L+VL+ VH FF+ +S + RDVR VLK +RA +L+ CKVVFSR
Sbjct: 310 ETDGALTTILKVLKQVHHMFFNEVSGDLV------DRDVRQVLKTVRAEVLEGCKVVFSR 363
Query: 1253 VFPTQFRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWAVQNDCFLVHPSW 1432
VFPT+F+AE H LW++ E+LG CST L + VTHVV+ DAGT+KSRWA++ FLVHP W
Sbjct: 364 VFPTKFQAENHQLWKMVEQLGGTCSTELDQSVTHVVATDAGTEKSRWALKEKKFLVHPRW 423
Query: 1433 IEASSFLWQRQSEDRFPV 1486
IEAS++ W+RQ E+ F V
Sbjct: 424 IEASNYFWKRQMEENFTV 441
>gb|EMJ05544.1| hypothetical protein PRUPE_ppa005647mg [Prunus persica]
Length = 449
Score = 387 bits (995), Expect = e-105
Identities = 214/436 (49%), Positives = 282/436 (64%), Gaps = 9/436 (2%)
Frame = +2
Query: 212 SSPD--IDFDSEDRPR--IKRRKLYD----NEESEEQLPIKIEDKPESSSARG-CLHPGY 364
SSPD D++S+D KRRK+ + +E I +E+ E+S + C HPG
Sbjct: 31 SSPDEEADYESDDGSERSTKRRKVENLGSIDETQGSTSQIFVEENSEASPKKDICTHPGS 90
Query: 365 MWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLRKDDLKSVLSAKKXXXX 544
+ +CI CGQ +++S V L YIHK+F L++ EI R+R D+K L KK
Sbjct: 91 VKDLCIVCGQRV------DEKSGVPLGYIHKDFWLNNDEIDRVRSTDIKKSLHLKKLYLV 144
Query: 545 XXXXXXXXNSARFIDVDPEEESYISSTYLVGQRNVESESGDIGRTLYKLPSMHMWTKLRP 724
NS + EEE YL Q + + D +L+++ MHM TKLRP
Sbjct: 145 LDLDHTLLNSTHLNHMTAEEE------YLHSQTDSLQDVSD--GSLFRVDVMHMMTKLRP 196
Query: 725 FVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRIISSSDSTNRRQKDLDV 904
FV KFL+EA++M+EMYIYTMGERAYA +MAKLLDP+ ++F DR+IS D T + QK LDV
Sbjct: 197 FVRKFLKEASEMFEMYIYTMGERAYALEMAKLLDPRKEYFGDRVISRDDGTQKHQKGLDV 256
Query: 905 VLGAESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGTKSLTQSKRDEAESEG 1084
VLG ESA +ILDDTE W KHK NLI++ERYHFF +SC QF KSL++ K DE+E EG
Sbjct: 257 VLGHESAALILDDTENAWTKHKDNLILMERYHFFRSSCHQFGFHCKSLSELKSDESEPEG 316
Query: 1085 TLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIRARILKDCKVVFSRVFPT 1264
L+ +L+VL+ +H FF + + RDVR VLK +R ILK CK+VFSRVFP+
Sbjct: 317 ALATVLEVLKRIHNMFFYESKDNLI------DRDVRQVLKTLRKEILKGCKIVFSRVFPS 370
Query: 1265 QFRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWAVQNDCFLVHPSWIEAS 1444
+F+AE H LW++AE+LGA CST L VTHVVS DAGT+KSRWAV+ FLVHP WIEAS
Sbjct: 371 KFQAENHQLWKMAEQLGATCSTELDLSVTHVVSTDAGTEKSRWAVKEKKFLVHPQWIEAS 430
Query: 1445 SFLWQRQSEDRFPVTK 1492
+++W +Q+ED+FPV +
Sbjct: 431 NYMWLKQAEDKFPVNQ 446
>ref|XP_002324547.2| hypothetical protein POPTR_0018s11760g [Populus trichocarpa]
gi|550318538|gb|EEF03112.2| hypothetical protein
POPTR_0018s11760g [Populus trichocarpa]
Length = 472
Score = 387 bits (994), Expect = e-105
Identities = 221/466 (47%), Positives = 290/466 (62%), Gaps = 19/466 (4%)
Frame = +2
Query: 140 IDFELDSISNASENHQDD------DDQEFESSPDIDFDSED-------RPRIKRRKLYDN 280
+D ELDS S+AS D+ D SSPD D ++E+ R R+KR K+
Sbjct: 21 LDTELDSKSSASSASDDEAPNQRHSDSAASSSPDQDKEAEEDDDSDFQRKRVKRSKVETV 80
Query: 281 EESEEQLPI----KIEDKPESSSARG-CLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLK 445
E E+ ++ E+S ++ C HPG +CI CGQ + +S V
Sbjct: 81 EIVEDDGGTTSFASLKHNSEASISKEICTHPGSFGTMCIVCGQLL------DGESGVTFG 134
Query: 446 YIHKEFELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXXNSARFIDVDPEEESYISST 625
YIHK L + EI RLR D+K++L KK NS + + + +EE
Sbjct: 135 YIHKGLRLGNDEIVRLRNTDMKNLLRHKKLYLILDLDHTLLNSTQLMHMTLDEE------ 188
Query: 626 YLVGQRNVESESGDIGR-TLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYA 802
YL GQ + D+ + +L+ L SM M TKLRPFV FL+EA+QM+EMYIYTMG+RAYA
Sbjct: 189 YLNGQTD---SLQDVSKGSLFMLSSMQMMTKLRPFVRTFLKEASQMFEMYIYTMGDRAYA 245
Query: 803 EKMAKLLDPKGKFFADRIISSSDSTNRRQKDLDVVLGAESAVVILDDTEPVWPKHKSNLI 982
+MAKLLDP ++F ++IS D T R QK LDVVLG ESAV+ILDDTE W KHK NLI
Sbjct: 246 LEMAKLLDPGREYFNAKVISRDDGTQRHQKGLDVVLGQESAVLILDDTENAWMKHKDNLI 305
Query: 983 VVERYHFFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMS 1162
++ERYHFF +SC QF KSL++ K DE+ESEG L+ +L+VLR +HQ FF+ +
Sbjct: 306 LMERYHFFASSCHQFGFNCKSLSEQKTDESESEGALASILKVLRKIHQIFFEELEEN--- 362
Query: 1163 QFCFDSRDVRLVLKEIRARILKDCKVVFSRVFPTQFRAETHHLWRLAEELGAICSTSLRE 1342
D RDVR VLK +R +LK CK+VFSRVFPTQ +A+ HHLWR+AE+LGA CST L
Sbjct: 363 ---MDGRDVRQVLKTVRKDVLKGCKIVFSRVFPTQSQADNHHLWRMAEQLGATCSTELDP 419
Query: 1343 DVTHVVSLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRF 1480
VTHVVS D+GT+KS WA++++ FLV P WIEA+++ WQRQ E+ F
Sbjct: 420 SVTHVVSKDSGTEKSHWALKHNKFLVQPGWIEAANYFWQRQPEENF 465
>ref|XP_001781984.1| predicted protein [Physcomitrella patens] gi|162666557|gb|EDQ53208.1|
predicted protein [Physcomitrella patens]
Length = 563
Score = 386 bits (992), Expect = e-104
Identities = 213/471 (45%), Positives = 293/471 (62%), Gaps = 6/471 (1%)
Frame = +2
Query: 149 ELDSISNASENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQLPIKIEDKPE 328
+L+ ++ + + ++D D ES D + D ++ E S++ PI + E
Sbjct: 63 DLEEGTSENGSVEEDADSVVESEDHADDNHLDVEKVA-------ESSDDITPICVNYSGE 115
Query: 329 SSSARGCL-HPGYMWGVCIKCGQNKPDSEENEQQ-SRVCLKYIHKEFELSDSEIARLRKD 502
++ C HPG++W VCI+CG+ K + N+ RV L+YIH+ E+S+ E AR+R
Sbjct: 116 MVNSNKCPPHPGFIWDVCIRCGKRKSTAPSNDPVIDRVGLRYIHEGLEVSELEAARVRNA 175
Query: 503 DLKSVLSAKKXXXXXXXXXXXXNSARFIDVDPEEESYISSTYLVGQRNVESESGDIGRTL 682
+L+ V +K NSARF +V EE Y+ T+ GQ++ S L
Sbjct: 176 ELRRVTGKQKLLLVVDLDHTMLNSARFSEVPAEERIYL--TWTAGQQHGRVSS------L 227
Query: 683 YKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRIIS 862
++L + MWTKLRPF HKFLEEA+++YEMY+YTMGE+ YA+ MA+LLDP G+ F RIIS
Sbjct: 228 HQLTKLGMWTKLRPFAHKFLEEASKLYEMYVYTMGEKIYAQAMAELLDPTGQLFGGRIIS 287
Query: 863 SSDSTNRRQKDLDVVLGAESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGTK 1042
+DST R KDLDVVLGAESAVVILDDTE VWP H+SNLI++ERYHFF +SC QF
Sbjct: 288 QTDSTKRHTKDLDVVLGAESAVVILDDTEAVWPNHRSNLILMERYHFFTSSCHQFRVRAP 347
Query: 1043 SLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQF-CFDSRDVRLVLKEIRAR 1219
SL Q RDE E +GTL+ L+ L+++H FF+ K M + + DVR V++ IR +
Sbjct: 348 SLAQMHRDECEIDGTLATTLKTLQAIHHEFFNGHKGKSMKRRPPLELPDVRDVIRSIRGK 407
Query: 1220 ILKDCKVVFSRVFPTQFR-AETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWA 1396
+L C +VFSR+FPT + E H W+LA ELGA CST THVV+LD GTDK+RWA
Sbjct: 408 LLSGCHIVFSRIFPTGLQNPEFHPFWQLAVELGARCSTVCDHTTTHVVALDRGTDKARWA 467
Query: 1397 VQNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQ--SSGFVESVSQLPL 1543
Q+ LVHP W+EA+S+LW+R E FPVT S S+ F +++S P+
Sbjct: 468 KQHGISLVHPRWVEAASYLWKRPREKDFPVTDDASALISTTFSKNISVEPI 518
>ref|XP_004962192.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Setaria italica]
Length = 543
Score = 384 bits (985), Expect = e-103
Identities = 214/472 (45%), Positives = 289/472 (61%), Gaps = 14/472 (2%)
Frame = +2
Query: 137 LIDFELDSISNA---------SENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEES 289
L+D EL+ S A S + DD+ E E S +++ + ++ KRR++ E+S
Sbjct: 23 LLDSELELASGADSAFPGDPSSASPDTDDEGEDEDSEEVEVELLEQNSAKRRRV--EEQS 80
Query: 290 EEQ----LPIKIEDKPESS-SARGCLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIH 454
++Q P KI P + C HPGY G+C +CG KP EE+ S V YIH
Sbjct: 81 QDQGTSIRPDKIATGPSKNVQVEVCPHPGYFGGLCFRCG--KPQDEEDA--SGVAFGYIH 136
Query: 455 KEFELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXXNSARFIDVDPEEESYISSTYLV 634
K L SEI RLR DLK++L +K NS + D+ E +
Sbjct: 137 KGLRLGTSEIDRLRGADLKNLLRERKLVLILDLDHTLINSTKLQDISSAENE-------L 189
Query: 635 GQRNVESESGDIGRTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMA 814
G R + D R+++ L SM M TKLRPFV FL+EA+ M+EMYIYTMG++AYA ++A
Sbjct: 190 GIRTAALKD-DPDRSIFSLDSMQMLTKLRPFVRNFLKEASNMFEMYIYTMGDKAYAIEIA 248
Query: 815 KLLDPKGKFFADRIISSSDSTNRRQKDLDVVLGAESAVVILDDTEPVWPKHKSNLIVVER 994
KLLDP +F ++IS+SD T R QK LDV+LGAES VILDDTE VW KHK NLI++ER
Sbjct: 249 KLLDPSNVYFPSKVISNSDCTQRHQKGLDVILGAESVAVILDDTEYVWQKHKENLILMER 308
Query: 995 YHFFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCF 1174
YH+F +SC QF G KSL++S +DE ES+G L+ +L VL+ +H FFD +S
Sbjct: 309 YHYFASSCRQFGFGVKSLSESMQDERESDGALATVLDVLKRIHTIFFDTAVETALS---- 364
Query: 1175 DSRDVRLVLKEIRARILKDCKVVFSRVFPTQFRAETHHLWRLAEELGAICSTSLREDVTH 1354
SRDVR V+K +R +L+ CK+VFSRVFP R + +W++AE LGA+CST + VTH
Sbjct: 365 -SRDVRQVIKTVRKEVLEGCKLVFSRVFPNTSRPQEQMMWKMAEHLGAVCSTDVDSTVTH 423
Query: 1355 VVSLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQSS 1510
VV++D GT+K+RWAV+N FLVHP WIEA++F W RQ E+ FPV +S+
Sbjct: 424 VVAVDLGTEKARWAVKNKKFLVHPRWIEAANFRWHRQPEEDFPVIPPKEKST 475
>ref|XP_002437361.1| hypothetical protein SORBIDRAFT_10g025580 [Sorghum bicolor]
gi|241915584|gb|EER88728.1| hypothetical protein
SORBIDRAFT_10g025580 [Sorghum bicolor]
Length = 558
Score = 384 bits (985), Expect = e-103
Identities = 206/460 (44%), Positives = 287/460 (62%), Gaps = 4/460 (0%)
Frame = +2
Query: 164 SNASENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQLPIKIEDKPESSS-- 337
S+A DD+D++ + D + ++ ++ KRR++ + + ++ ++ + P +S
Sbjct: 43 SSAFPAATDDEDEDEDEDEDPEVEAVEQNGTKRRRV-EEQLQDQGTSVRPDKIPTGASKN 101
Query: 338 --ARGCLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLRKDDLK 511
C HPGY G+C +CG KP EEN S V YIHK L SEI RLR DLK
Sbjct: 102 VQVEACPHPGYFGGLCFRCG--KPQDEENV--SGVAFGYIHKGLRLGTSEIDRLRGADLK 157
Query: 512 SVLSAKKXXXXXXXXXXXXNSARFIDVDPEEESYISSTYLVGQRNVESESGDIGRTLYKL 691
++L +K NS + D+ E+ +G + S+ D R+++ L
Sbjct: 158 NLLRERKLVLILDLDHTLINSTKLQDISSAEKD-------LGIQTAASKD-DPNRSIFSL 209
Query: 692 PSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRIISSSD 871
SM M TKLRPFV +FL+EA+ M+EMYIYTMG++AYA ++AKLLDP +F ++IS+SD
Sbjct: 210 DSMQMLTKLRPFVREFLKEASNMFEMYIYTMGDKAYAIEIAKLLDPSNIYFPSKVISNSD 269
Query: 872 STNRRQKDLDVVLGAESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGTKSLT 1051
T R QK LDV+LGAES VILDDTE VW KHK NLI++ERYHFF +SC QF G +SL+
Sbjct: 270 CTQRHQKGLDVILGAESVAVILDDTEYVWQKHKENLILMERYHFFASSCRQFGFGVRSLS 329
Query: 1052 QSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIRARILKD 1231
+S +DE ES+G L+ +L VL+ +H FFD ++S S+DVR V+K +R IL+
Sbjct: 330 ESMQDERESDGALATVLDVLKRIHSIFFDLAVETDLS-----SQDVRQVIKAVRKEILQG 384
Query: 1232 CKVVFSRVFPTQFRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWAVQNDC 1411
CK+VFSRVFP R + LW++AE LGA+CST + VTHVV++D GT+K+RW V N
Sbjct: 385 CKIVFSRVFPNNTRPQEQMLWKMAEHLGAVCSTDVDSSVTHVVTVDLGTEKARWGVANKK 444
Query: 1412 FLVHPSWIEASSFLWQRQSEDRFPVTKKDSQSSGFVESVS 1531
FLVHP WIEA++F W RQ E+ FPVT +S +V+
Sbjct: 445 FLVHPRWIEAANFRWHRQPEEDFPVTAPKEKSRDIDNAVA 484
>ref|XP_004242583.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Solanum lycopersicum]
Length = 472
Score = 380 bits (977), Expect = e-103
Identities = 217/472 (45%), Positives = 291/472 (61%), Gaps = 22/472 (4%)
Frame = +2
Query: 140 IDFELDSISNAS------ENHQDDDDQEFESSPDIDFDSE---------DRPRIKRRKLY 274
+D ELDS S+ S EN + + + E E D D++ D R K+RK+
Sbjct: 21 LDAELDSASDVSPELDEVENGEAEVEVELEDEKGKDEDNDTGDGDDGNIDSRRSKKRKIE 80
Query: 275 DNEESEEQLPIKIEDKPESSSARG-------CLHPGYMWGVCIKCGQNKPDSEENEQQSR 433
E + + P + + ES+ G C HPG M G+CI+CGQ D +S
Sbjct: 81 LIEAAVD--PQSLVSRGESAETSGASLALDVCTHPGVMGGMCIRCGQKVED------ESG 132
Query: 434 VCLKYIHKEFELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXXNSARFIDVDPEEESY 613
V YIHK L+D E+ARLR+ DLK++L +K NS R D+ EE
Sbjct: 133 VAFGYIHKNLRLADDEVARLREKDLKNLLRHRKLILVLDLDHTLLNSTRLADISAEE--- 189
Query: 614 ISSTYLVGQRNVESESGDIGRTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGER 793
+YL QR V ++ + L+KL +HM TKLRPFVH FL+EA+ ++EMYIYTMGER
Sbjct: 190 ---SYLKDQREVLPDA--LRSNLFKLDWIHMMTKLRPFVHTFLKEASSLFEMYIYTMGER 244
Query: 794 AYAEKMAKLLDPKGKFFADRIISSSDSTNRRQKDLDVVLGAESAVVILDDTEPVWPKHKS 973
YA +MAKLLDP G +F R+I+ SDST R QK LDVVLG ESAV+ILDDTE VW KH+
Sbjct: 245 PYALEMAKLLDPGGIYFHSRVIAQSDSTRRHQKGLDVVLGQESAVLILDDTEVVWGKHRE 304
Query: 974 NLIVVERYHFFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNK 1153
NLI+++RYHFF +SC QF KSL++ K DE E+EG L+ +L+VL+ +H+ FFD
Sbjct: 305 NLILMDRYHFFTSSCRQFGLKCKSLSEQKSDENEAEGALASVLEVLQRIHRLFFDPERGD 364
Query: 1154 EMSQFCFDSRDVRLVLKEIRARILKDCKVVFSRVFPTQFRAETHHLWRLAEELGAICSTS 1333
+ + RDVR VLK +R ILK CK+VF+ V P Q + E H+ W+LAE+LGA ST
Sbjct: 365 NIME-----RDVRQVLKTVRKEILKGCKIVFTGVIPIQCQPENHYYWKLAEKLGATFSTE 419
Query: 1334 LREDVTHVVSLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVT 1489
+ E VTHVVS++ T+KSR AV+ FLVHP WIEA+++LW++ E+ FPV+
Sbjct: 420 VDESVTHVVSMNDKTEKSRQAVREKKFLVHPRWIEAANYLWRKPPEENFPVS 471
>ref|XP_006343662.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Solanum tuberosum]
Length = 478
Score = 380 bits (976), Expect = e-102
Identities = 217/475 (45%), Positives = 287/475 (60%), Gaps = 25/475 (5%)
Frame = +2
Query: 140 IDFELDSISNAS------ENHQDDDDQEFESSP--------------DIDFDSEDRPRIK 259
+D ELDS S+ S EN + + ++E E D D S D R K
Sbjct: 22 LDAELDSASDVSPELDEVENGEAEGEEEVEDEKGQDEGNDTGDGDDDDDDDGSIDSSRSK 81
Query: 260 RRKLYDNEESEEQLPIKIEDKPESSSARG-----CLHPGYMWGVCIKCGQNKPDSEENEQ 424
+RK+ E + + +P +S C HPG M G+CI+CGQ D
Sbjct: 82 KRKIELIEAAVDPQSSVSRGEPAETSGASLALDVCTHPGVMGGMCIRCGQKVED------ 135
Query: 425 QSRVCLKYIHKEFELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXXNSARFIDVDPEE 604
+S V YIHK L+D E+ARLR DLK++L KK NS R D+ EE
Sbjct: 136 ESGVAFGYIHKNLRLADDEVARLRDKDLKNLLRHKKLILVLDLDHTLLNSTRLADISAEE 195
Query: 605 ESYISSTYLVGQRNVESESGDIGRTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTM 784
+YL QR V ++ + L+KL +HM TKLRPFVH FL+EA+ ++EMYIYTM
Sbjct: 196 ------SYLKDQREVLPDA--LRNNLFKLDWIHMMTKLRPFVHTFLKEASSLFEMYIYTM 247
Query: 785 GERAYAEKMAKLLDPKGKFFADRIISSSDSTNRRQKDLDVVLGAESAVVILDDTEPVWPK 964
GER YA +MA LLDP G +F R+I+ SDST R QK LDVVLG ESAV+ILDDTE VW K
Sbjct: 248 GERPYALEMASLLDPGGIYFHSRVIAQSDSTRRHQKGLDVVLGQESAVLILDDTEVVWGK 307
Query: 965 HKSNLIVVERYHFFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNI 1144
H+ NLI+++RYHFF +SC QF KSL++ K DE E+EG L+ +L+VL+ +H+ FFD
Sbjct: 308 HRENLILMDRYHFFTSSCRQFGLKCKSLSEQKSDENEAEGALASVLEVLQRIHRLFFDLE 367
Query: 1145 SNKEMSQFCFDSRDVRLVLKEIRARILKDCKVVFSRVFPTQFRAETHHLWRLAEELGAIC 1324
+ + RDVR VLK +R ILK CK+VF+ V P Q + E HH W+LAE+LGA
Sbjct: 368 RGDNIME-----RDVRQVLKTVRKEILKGCKIVFTGVIPIQCQPENHHYWKLAEKLGATF 422
Query: 1325 STSLREDVTHVVSLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVT 1489
ST + E VTHVVS++ T+KSR A++ FLVHPSWIEA+++LW++ E+ FPV+
Sbjct: 423 STEVDESVTHVVSMNDKTEKSRQALREKKFLVHPSWIEAANYLWRKPPEENFPVS 477
>ref|XP_004242582.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Solanum lycopersicum]
Length = 512
Score = 379 bits (974), Expect = e-102
Identities = 214/460 (46%), Positives = 287/460 (62%), Gaps = 10/460 (2%)
Frame = +2
Query: 140 IDFELDSISNASE----NHQDDDDQEFESSPDIDFD-SEDRPRIKRRKLYDNEESEEQLP 304
+D ELDS S+ E + +++ E E + D D S D R K+RK+ E + +
Sbjct: 71 LDAELDSASDVDEVESGEAEGEEEVEDEDNDTGDGDGSIDSSRSKKRKIELIEGAVDPQS 130
Query: 305 IKIEDKPESSSARG-----CLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFEL 469
+P +S C HPG M G+CI+CGQ D +S V YIHK L
Sbjct: 131 SVSRGEPAETSGASMALDVCTHPGVMGGMCIRCGQKVED------ESGVAFGYIHKNLRL 184
Query: 470 SDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXXNSARFIDVDPEEESYISSTYLVGQRNV 649
+D E+ARLR+ DLK++L +K NS R D+ EE +YL QR V
Sbjct: 185 ADDEVARLREKDLKNLLRHRKLILVLDLDHTLLNSTRLADISAEE------SYLKDQREV 238
Query: 650 ESESGDIGRTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDP 829
++ + L+KL +HM TKLRPFVH FL+EA+ ++EMYIYTMGER YA +MAKLLDP
Sbjct: 239 LPDA--LRSNLFKLDWIHMMTKLRPFVHTFLKEASSLFEMYIYTMGERPYALEMAKLLDP 296
Query: 830 KGKFFADRIISSSDSTNRRQKDLDVVLGAESAVVILDDTEPVWPKHKSNLIVVERYHFFH 1009
G +F R+I+ SDST R QK LDVVLG ESAV+ILDDTE VW KH+ NLI+++RYHFF
Sbjct: 297 GGIYFHSRVIAQSDSTRRHQKGLDVVLGQESAVLILDDTEVVWGKHRENLILMDRYHFFT 356
Query: 1010 ASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDV 1189
+SC QF KSL++ K DE E+EG L+ +L+VL+ +H+ FFD + + RDV
Sbjct: 357 SSCRQFGLKCKSLSEQKSDENEAEGALASVLEVLQRIHRLFFDPERGDNIME-----RDV 411
Query: 1190 RLVLKEIRARILKDCKVVFSRVFPTQFRAETHHLWRLAEELGAICSTSLREDVTHVVSLD 1369
R VLK +R ILK CK+VF+ V P Q + E H+ W+LAE+LGA ST + E VTHVVS++
Sbjct: 412 RQVLKTVRKEILKGCKIVFTGVIPIQCQPENHYYWKLAEKLGATFSTEVDESVTHVVSMN 471
Query: 1370 AGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVT 1489
T+KSR AV+ FLVHP WIEA+++LW++ E+ FPV+
Sbjct: 472 DKTEKSRQAVREKKFLVHPRWIEAANYLWRKPPEENFPVS 511
>dbj|BAB08870.1| unnamed protein product [Arabidopsis thaliana]
Length = 1065
Score = 377 bits (969), Expect = e-102
Identities = 202/455 (44%), Positives = 280/455 (61%)
Frame = +2
Query: 140 IDFELDSISNASENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQLPIKIED 319
+D ELDS S+AS ++++ E + +KR+KL EE+
Sbjct: 647 LDAELDSASDASSGPSEEEEAE----------DDVESGLKRQKLEHLEEA---------- 686
Query: 320 KPESSSARGCLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLRK 499
SSS C HPG +C CGQ +++ V +YIHKE L++ EI+RLR
Sbjct: 687 ---SSSKGECEHPGSFGNMCFVCGQKL-------EETGVSFRYIHKEMRLNEDEISRLRD 736
Query: 500 DDLKSVLSAKKXXXXXXXXXXXXNSARFIDVDPEEESYISSTYLVGQRNVESESGDIGRT 679
D + + +K N+ D+ PEEE S T+ +++ G +
Sbjct: 737 SDSRFLQRQRKLYLVLDLDHTLLNTTILRDLKPEEEYLKSHTH-----SLQDGCNVSGGS 791
Query: 680 LYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRII 859
L+ L M M TKLRPFVH FL+EA++M+ MYIYTMG+R YA +MAKLLDPKG++F DR+I
Sbjct: 792 LFLLEFMQMMTKLRPFVHSFLKEASEMFVMYIYTMGDRNYARQMAKLLDPKGEYFGDRVI 851
Query: 860 SSSDSTNRRQKDLDVVLGAESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGT 1039
S D T R +K LDVVLG ESAV+ILDDTE WPKHK NLIV+ERYHFF +SC QF
Sbjct: 852 SRDDGTVRHEKSLDVVLGQESAVLILDDTENAWPKHKDNLIVIERYHFFSSSCRQFDHRY 911
Query: 1040 KSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIRAR 1219
KSL++ K DE+E +G L+ +L+VL+ H FF+N+ +RDVRL+LK++R
Sbjct: 912 KSLSELKSDESEPDGALATVLKVLKQAHALFFENVDEG------ISNRDVRLMLKQVRKE 965
Query: 1220 ILKDCKVVFSRVFPTQFRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWAV 1399
ILK CK+VFSRVFPT+ + E H LW++AEELGA C+T + VTHVV++D GT+K+RWAV
Sbjct: 966 ILKGCKIVFSRVFPTKAKPEDHPLWKMAEELGATCATEVDASVTHVVAMDVGTEKARWAV 1025
Query: 1400 QNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQ 1504
+ ++VH WI+A+++LW +Q E+ F + + Q
Sbjct: 1026 REKKYVVHRGWIDAANYLWMKQPEENFGLEQLKKQ 1060
>ref|NP_001078764.1| C-terminal domain phosphatase-like 4 [Arabidopsis thaliana]
gi|122154038|sp|Q00IB6.1|CPL4_ARATH RecName: Full=RNA
polymerase II C-terminal domain phosphatase-like 4;
Short=FCP-like 4; AltName: Full=Carboxyl-terminal
phosphatase-like 4; Short=AtCPL4; Short=CTD
phosphatase-like 4 gi|95115186|gb|ABF55959.1|
carboxyl-terminal phosphatase-like 4 [Arabidopsis
thaliana] gi|332009601|gb|AED96984.1| C-terminal domain
phosphatase-like 4 [Arabidopsis thaliana]
Length = 440
Score = 377 bits (969), Expect = e-102
Identities = 202/455 (44%), Positives = 280/455 (61%)
Frame = +2
Query: 140 IDFELDSISNASENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQLPIKIED 319
+D ELDS S+AS ++++ E + +KR+KL EE+
Sbjct: 22 LDAELDSASDASSGPSEEEEAE----------DDVESGLKRQKLEHLEEA---------- 61
Query: 320 KPESSSARGCLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLRK 499
SSS C HPG +C CGQ +++ V +YIHKE L++ EI+RLR
Sbjct: 62 ---SSSKGECEHPGSFGNMCFVCGQKL-------EETGVSFRYIHKEMRLNEDEISRLRD 111
Query: 500 DDLKSVLSAKKXXXXXXXXXXXXNSARFIDVDPEEESYISSTYLVGQRNVESESGDIGRT 679
D + + +K N+ D+ PEEE S T+ +++ G +
Sbjct: 112 SDSRFLQRQRKLYLVLDLDHTLLNTTILRDLKPEEEYLKSHTH-----SLQDGCNVSGGS 166
Query: 680 LYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRII 859
L+ L M M TKLRPFVH FL+EA++M+ MYIYTMG+R YA +MAKLLDPKG++F DR+I
Sbjct: 167 LFLLEFMQMMTKLRPFVHSFLKEASEMFVMYIYTMGDRNYARQMAKLLDPKGEYFGDRVI 226
Query: 860 SSSDSTNRRQKDLDVVLGAESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGT 1039
S D T R +K LDVVLG ESAV+ILDDTE WPKHK NLIV+ERYHFF +SC QF
Sbjct: 227 SRDDGTVRHEKSLDVVLGQESAVLILDDTENAWPKHKDNLIVIERYHFFSSSCRQFDHRY 286
Query: 1040 KSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIRAR 1219
KSL++ K DE+E +G L+ +L+VL+ H FF+N+ +RDVRL+LK++R
Sbjct: 287 KSLSELKSDESEPDGALATVLKVLKQAHALFFENVDEG------ISNRDVRLMLKQVRKE 340
Query: 1220 ILKDCKVVFSRVFPTQFRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWAV 1399
ILK CK+VFSRVFPT+ + E H LW++AEELGA C+T + VTHVV++D GT+K+RWAV
Sbjct: 341 ILKGCKIVFSRVFPTKAKPEDHPLWKMAEELGATCATEVDASVTHVVAMDVGTEKARWAV 400
Query: 1400 QNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQ 1504
+ ++VH WI+A+++LW +Q E+ F + + Q
Sbjct: 401 REKKYVVHRGWIDAANYLWMKQPEENFGLEQLKKQ 435
>ref|XP_004287124.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Fragaria vesca subsp. vesca]
Length = 464
Score = 376 bits (966), Expect = e-101
Identities = 210/462 (45%), Positives = 288/462 (62%), Gaps = 11/462 (2%)
Frame = +2
Query: 140 IDFELDSISNASENHQD------DDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQL 301
++ EL+S S+ S ++ DDD ESS D E R+KRRK+ + E EE
Sbjct: 20 LETELESGSSESSPDEECKAAVGDDDGGSESS-----DVESESRVKRRKVENVEILEEAN 74
Query: 302 PIKIEDKPES-SSARG----CLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFE 466
+ + E S A G C HPG +C CGQ + QS V YIHK
Sbjct: 75 ALTSQAVSEEISEASGVDDLCAHPGSFGDMCFLCGQRLIE------QSGVTFGYIHKGLR 128
Query: 467 LSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXXNSARFIDVDPEEESYISSTYLVGQRN 646
L+D EI RLR D+K L+ KK N+ V +EE +
Sbjct: 129 LNDGEIDRLRNTDIKKSLNNKKLYLVLDLDHTLLNTTLLNHVTAKEEYLMCPP------- 181
Query: 647 VESESGDIGRTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLD 826
+S + +L++L M M TKLRPF+ FL+EA++++EMYIYTMG+RAYA +MAKLLD
Sbjct: 182 -DSLPDVLKDSLFRLDFMRMMTKLRPFIRTFLKEASEIFEMYIYTMGDRAYALEMAKLLD 240
Query: 827 PKGKFFADRIISSSDSTNRRQKDLDVVLGAESAVVILDDTEPVWPKHKSNLIVVERYHFF 1006
PK ++F DR+IS D T R QK LD+VLG ESAV+ILDDTE W KHK NLI++ERYHFF
Sbjct: 241 PKKEYFGDRVISRDDGTQRHQKGLDIVLGQESAVLILDDTENAWIKHKDNLILMERYHFF 300
Query: 1007 HASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRD 1186
+SC QF +SL++ K DE+E EG L+ +L +L+ +H+ FF ++ + RD
Sbjct: 301 RSSCAQFGFTCESLSELKSDESEPEGALANVLDLLKRIHKMFFYDLGGNLV------DRD 354
Query: 1187 VRLVLKEIRARILKDCKVVFSRVFPTQFRAETHHLWRLAEELGAICSTSLREDVTHVVSL 1366
VR VLK +R +L CKVVFSR+ P++ A +HHLW++AE+LGAICST + VTHVV+L
Sbjct: 355 VRQVLKIVRKEVLNGCKVVFSRIIPSKVLASSHHLWKMAEQLGAICSTEVDSTVTHVVAL 414
Query: 1367 DAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVTK 1492
DAGT+KSRWAV+++ FLVHP W+EA++++WQ+Q+E++FPVT+
Sbjct: 415 DAGTEKSRWAVKHNKFLVHPRWLEAANYMWQKQAEEKFPVTE 456
>ref|XP_006486243.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like isoform X1 [Citrus sinensis]
gi|568865772|ref|XP_006486244.1| PREDICTED: RNA
polymerase II C-terminal domain phosphatase-like 4-like
isoform X2 [Citrus sinensis]
gi|568865774|ref|XP_006486245.1| PREDICTED: RNA
polymerase II C-terminal domain phosphatase-like 4-like
isoform X3 [Citrus sinensis]
Length = 478
Score = 375 bits (964), Expect = e-101
Identities = 213/470 (45%), Positives = 287/470 (61%), Gaps = 13/470 (2%)
Frame = +2
Query: 140 IDFELDSIS-------NASENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQ 298
+D ELDS S A + +D++ + E+ + D +D RIKRRK E +E+
Sbjct: 21 LDAELDSNSLGSSPEKEAEDKDEDEESIDEEAENEEARDDKDLERIKRRKTQIVETIQER 80
Query: 299 ----LPIKIEDKPESS-SARGCLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEF 463
L +E+K E S C HPG + G+C +CG+ E++S V YI K
Sbjct: 81 PGPTLLGNLEEKTEVSLEMDNCPHPGSLGGMCYRCGKRL------EEESGVTFSYICKGL 134
Query: 464 ELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXXNSARFIDVDPEEESYISSTYLVGQR 643
L + EI RLR D+K +L +K NS + + PEE+ YL Q
Sbjct: 135 RLGNDEIDRLRNTDMKHLLRHRKLYLILDLDHTLLNSTLLLHLTPEED------YLKSQA 188
Query: 644 NVESESGDIGR-TLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKL 820
+ D+ + +L+ L M+M TKLRPFVH FL+EA++M+EMYIYTMG+R YA +MAKL
Sbjct: 189 D---SLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKL 245
Query: 821 LDPKGKFFADRIISSSDSTNRRQKDLDVVLGAESAVVILDDTEPVWPKHKSNLIVVERYH 1000
LDP ++F R+IS D T R QK LDVVLG ESAV+ILDDTE W KH+ NLI++ERYH
Sbjct: 246 LDPSREYFNARVISRDDGTQRHQKGLDVVLGQESAVLILDDTENAWTKHRDNLILMERYH 305
Query: 1001 FFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDS 1180
FF +SC QF +SL+Q + DE+E EG L+ +L+VL+ +H FFD ++N
Sbjct: 306 FFASSCRQFGYHCQSLSQLRSDESELEGALASVLKVLKRIHNIFFDELAND------LAG 359
Query: 1181 RDVRLVLKEIRARILKDCKVVFSRVFPTQFRAETHHLWRLAEELGAICSTSLREDVTHVV 1360
RDVR VLK +R +LK CK+VFS VFPT+F A+TH+LW++AE+LGA C L VTHVV
Sbjct: 360 RDVRQVLKMVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCLIELDPSVTHVV 419
Query: 1361 SLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQSS 1510
S DA T+KSRWA + FLV P WIE ++FLWQRQ E+ FPV + + +
Sbjct: 420 STDARTEKSRWAAKEAKFLVDPRWIETANFLWQRQPEENFPVKQNKPEEN 469
>ref|XP_002965594.1| hypothetical protein SELMODRAFT_167775 [Selaginella moellendorffii]
gi|300166408|gb|EFJ33014.1| hypothetical protein
SELMODRAFT_167775 [Selaginella moellendorffii]
Length = 411
Score = 374 bits (961), Expect = e-101
Identities = 193/396 (48%), Positives = 266/396 (67%), Gaps = 12/396 (3%)
Frame = +2
Query: 365 MWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLRKDDLKSVLSAKKXXXX 544
MWGVCI+CG KP+SE S V LKYIH+EFEL+ +AR+R+D+L+ VL +K
Sbjct: 1 MWGVCIRCGVLKPNSEPGGSASNVALKYIHEEFELAGDVLARVREDELRQVLGKRKLFLV 60
Query: 545 XXXXXXXXNSARFIDVDPEEESYISSTYL-VGQRNVESESGDI----------GRTLYKL 691
NSAR+++V P+E +Y+ TY+ V + + + S G L+++
Sbjct: 61 LDLDHTLLNSARWMEVFPDETAYLEHTYMNVPEDKIPALSNGAPAVAGVIQPGGGGLHRI 120
Query: 692 PSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRIISSSD 871
M +WTKLRPF HKFLEEA++++EMY+YTMGER YA MA LLDP GKFF R+IS D
Sbjct: 121 HGMQLWTKLRPFAHKFLEEASKLFEMYVYTMGERMYAVTMAHLLDPTGKFFKGRVISQRD 180
Query: 872 STNRRQKDLDVVLGAESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGTKSLT 1051
ST R+ KDLD+VLGA+SAV+ILDDTE VWPKH++NLIV+ERYHFF +SC QF SLT
Sbjct: 181 STCRQTKDLDIVLGADSAVLILDDTEAVWPKHRANLIVMERYHFFQSSCRQFGLENPSLT 240
Query: 1052 QSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIRARILKD 1231
+++RDE++ EG L+ +L+VL+ +H FF + S++ D RD+ V +R+ IL
Sbjct: 241 KAERDESKDEGALANVLKVLQRIHSDFF---MESDDSRYTCDVRDITSV---VRSEILSG 294
Query: 1232 CKVVFSRVFPTQ-FRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWAVQND 1408
CK+VFSR+FPT E LWRL +LGA C + + VTHVV+LD TDK++WA ++
Sbjct: 295 CKLVFSRIFPTDCLEPELTPLWRLCVDLGAECVLAHDDSVTHVVALDRFTDKAKWAKEHR 354
Query: 1409 CFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQSSGF 1516
FLVHP+W+EA+ LW+R +E FPV + +++ F
Sbjct: 355 KFLVHPAWVEAAHSLWRRPNELEFPVREGQTRAPVF 390
>ref|XP_002324546.2| hypothetical protein POPTR_0018s11760g [Populus trichocarpa]
gi|550318537|gb|EEF03111.2| hypothetical protein
POPTR_0018s11760g [Populus trichocarpa]
Length = 468
Score = 373 bits (958), Expect = e-100
Identities = 218/467 (46%), Positives = 288/467 (61%), Gaps = 20/467 (4%)
Frame = +2
Query: 140 IDFELDSISNASENHQDD------DDQEFESSPDIDFDSED-------RPRIKRRKLYDN 280
+D ELDS S+AS D+ D SSPD D ++E+ R R+KR K+
Sbjct: 21 LDTELDSKSSASSASDDEAPNQRHSDSAASSSPDQDKEAEEDDDSDFQRKRVKRSKVETV 80
Query: 281 EESEEQLPI----KIEDKPESSSARG-CLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLK 445
E E+ ++ E+S ++ C HPG +CI CGQ + +S V
Sbjct: 81 EIVEDDGGTTSFASLKHNSEASISKEICTHPGSFGTMCIVCGQLL------DGESGVTFG 134
Query: 446 YIHKEFELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXXNSARFIDVDPEEESYISST 625
YIHK L + EI RLR D+K++L KK NS + + + +EE
Sbjct: 135 YIHKGLRLGNDEIVRLRNTDMKNLLRHKKLYLILDLDHTLLNSTQLMHMTLDEE------ 188
Query: 626 YLVGQRNVESESGDIGR-TLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYA 802
YL GQ + D+ + +L+ L SM M TKLRPFV FL+EA+QM+EMYIYTMG+RAYA
Sbjct: 189 YLNGQTD---SLQDVSKGSLFMLSSMQMMTKLRPFVRTFLKEASQMFEMYIYTMGDRAYA 245
Query: 803 EKMAKLLDPKGKFFADRIISSSDSTNRRQKDLDVVLGAESAVVILDDTEPVWPKHKSNLI 982
+MAKLLDP ++F ++IS D T R QK LDVVLG ESAV+ILDDTE W KHK NLI
Sbjct: 246 LEMAKLLDPGREYFNAKVISRDDGTQRHQKGLDVVLGQESAVLILDDTENAWMKHKDNLI 305
Query: 983 VVERYHFFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFF-DNISNKEM 1159
++ERYHFF +SC QF KSL++ K DE+ESEG L+ +L+VLR +HQ FF D+I + +
Sbjct: 306 LMERYHFFASSCHQFGFNCKSLSEQKTDESESEGALASILKVLRKIHQIFFEDHILSLAL 365
Query: 1160 SQFCFDSRDVRLVLKEIRARILKDCKVVFSRVFPTQFRAETHHLWRLAEELGAICSTSLR 1339
VLK +R +LK CK+VFSRVFPTQ +A+ HHLWR+AE+LGA CST L
Sbjct: 366 Q-----------VLKTVRKDVLKGCKIVFSRVFPTQSQADNHHLWRMAEQLGATCSTELD 414
Query: 1340 EDVTHVVSLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRF 1480
VTHVVS D+GT+KS WA++++ FLV P WIEA+++ WQRQ E+ F
Sbjct: 415 PSVTHVVSKDSGTEKSHWALKHNKFLVQPGWIEAANYFWQRQPEENF 461
>ref|XP_002864543.1| hypothetical protein ARALYDRAFT_332090 [Arabidopsis lyrata subsp.
lyrata] gi|297310378|gb|EFH40802.1| hypothetical protein
ARALYDRAFT_332090 [Arabidopsis lyrata subsp. lyrata]
Length = 1006
Score = 372 bits (955), Expect = e-100
Identities = 204/457 (44%), Positives = 287/457 (62%), Gaps = 2/457 (0%)
Frame = +2
Query: 140 IDFELDSISNASENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQLPIKIED 319
+D ELDS S+AS +++++ + ++ +KRRKL E +E E+
Sbjct: 583 LDAELDSASDASSGPSEEEEEA---------EDDEESGLKRRKLEHLETVDE------EE 627
Query: 320 KPESSSARG-CLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLR 496
E+SS++G C HPG +C CGQ +++ V +YIHKE L++ EI+RLR
Sbjct: 628 IEEASSSKGECQHPGSFGNMCFVCGQKL-------EETGVSFRYIHKEMRLNEDEISRLR 680
Query: 497 KDDLKSVLSAKKXXXXXXXXXXXXNSARFIDVDPEEESYISSTYLVGQRNVESESGDI-G 673
D + + +K NS D+ PEEE S T+ + + D+ G
Sbjct: 681 DSDSRFLQRQRKLYLVLDLDHTLLNSTVLRDLKPEEEYLKSHTHSLQEPFDFLLISDVSG 740
Query: 674 RTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADR 853
+L+ L MHM TKLRPFVH FL+EA++M+ MYIYTMG+RAYA +MAKLLDP+G++F DR
Sbjct: 741 GSLFMLEFMHMMTKLRPFVHSFLKEASEMFVMYIYTMGDRAYARQMAKLLDPRGEYFGDR 800
Query: 854 IISSSDSTNRRQKDLDVVLGAESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHC 1033
IIS D T R QK LDVVLG ESAV+ILDDTE WP HK NLIV+ERYHFF +SC QF
Sbjct: 801 IISRDDGTVRHQKSLDVVLGQESAVLILDDTENAWPNHKDNLIVIERYHFFASSCRQFDH 860
Query: 1034 GTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIR 1213
KSL++ K DE+E +G L+ +L ++ ++ISN RDVR +LK++R
Sbjct: 861 KYKSLSELKSDESEPDGALATVL-------KNVDEDISN----------RDVRSMLKQVR 903
Query: 1214 ARILKDCKVVFSRVFPTQFRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRW 1393
+LK CKVVFSRVFPT+ + E H LW++AEELGA C+T + VTHVV++D GT+K+RW
Sbjct: 904 KEVLKGCKVVFSRVFPTKAKPEDHPLWKMAEELGATCATEVDASVTHVVAMDVGTEKARW 963
Query: 1394 AVQNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQ 1504
AV+ ++VH WI+A+++LW++Q E++F + + Q
Sbjct: 964 AVREKKYVVHRGWIDAANYLWKKQPEEKFSLEQLKKQ 1000
>gb|EOY32065.1| RNA polymerase II ctd phosphatase, putative isoform 2 [Theobroma
cacao]
Length = 357
Score = 369 bits (948), Expect = 2e-99
Identities = 195/378 (51%), Positives = 251/378 (66%), Gaps = 1/378 (0%)
Frame = +2
Query: 374 VCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLRKDDLKSVLSAKKXXXXXXX 553
+CI CGQ D +S V YIHK L + EI RLR D+K++L KK
Sbjct: 1 MCILCGQRLDD------ESGVTFGYIHKGLRLGNDEIVRLRSTDMKNLLRHKKLYLVLDL 54
Query: 554 XXXXXNSARFIDVDPEEESYISSTYLVGQRNVESESGDIGR-TLYKLPSMHMWTKLRPFV 730
NS + + + P+EE YL GQ + D+ R +L+ L MHM TKLRPFV
Sbjct: 55 DHTLLNSTQLMHLTPDEE------YLKGQSD---SLQDVSRGSLFMLDFMHMMTKLRPFV 105
Query: 731 HKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRIISSSDSTNRRQKDLDVVL 910
FL+EA++M+EMYIYTMG+R YA +MAKLLDP+ ++F+DR+IS D T + QK LDVVL
Sbjct: 106 RTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPRREYFSDRVISRDDGTQKHQKGLDVVL 165
Query: 911 GAESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGTKSLTQSKRDEAESEGTL 1090
G ESAVVILDDTE W KHK NLI++ERYH+F +SC QF KSL+Q K DE+E +G L
Sbjct: 166 GQESAVVILDDTENAWMKHKDNLILMERYHYFASSCHQFGYKCKSLSQLKSDESEPDGAL 225
Query: 1091 SILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIRARILKDCKVVFSRVFPTQF 1270
+ +L+ LR +H FFD + SRDVR VLK ++ +LK CK+VFS VFPT F
Sbjct: 226 ASVLKALRQIHHMFFDELDCN------LASRDVRQVLKTVQEEVLKGCKIVFSHVFPTNF 279
Query: 1271 RAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWAVQNDCFLVHPSWIEASSF 1450
AE+H LW++AE+LGA CST VTHVVS DAGT+KSRWAV+ FLVHP WIEA+++
Sbjct: 280 PAESHPLWKMAEQLGATCSTETDLSVTHVVSTDAGTEKSRWAVKEKKFLVHPRWIEATNY 339
Query: 1451 LWQRQSEDRFPVTKKDSQ 1504
LWQ+Q E+ FPV++ +Q
Sbjct: 340 LWQKQPEENFPVSQGKNQ 357