BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00017135
         (1941 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004953520.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   261   6e-67
ref|XP_006647718.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   261   8e-67
ref|XP_003572840.1| PREDICTED: uncharacterized protein LOC100831...   257   1e-65
ref|XP_002437970.1| hypothetical protein SORBIDRAFT_10g005680 [S...   255   4e-65
gb|AFW85556.1| putative ubiquitin carboxyl-terminal hydrolase su...   254   7e-65
gb|AFW63451.1| putative ubiquitin carboxyl-terminal hydrolase su...   254   1e-64
dbj|BAD72518.1| putative ubiquitin-specific protease 23 [Oryza s...   252   5e-64
ref|NP_001056992.1| Os06g0184300 [Oryza sativa Japonica Group] g...   251   6e-64
gb|EEE65221.1| hypothetical protein OsJ_20367 [Oryza sativa Japo...   251   6e-64
gb|EEC80142.1| hypothetical protein OsI_21934 [Oryza sativa Indi...   251   6e-64
ref|XP_004954214.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   250   1e-63
ref|XP_006857223.1| hypothetical protein AMTR_s00065p00205690 [A...   249   2e-63
ref|XP_003572898.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   249   2e-63
gb|AAO72607.1| putative ubiquitin-specific protease [Oryza sativ...   249   2e-63
ref|XP_004964661.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   248   5e-63
ref|XP_003564195.1| PREDICTED: uncharacterized protein LOC100826...   248   5e-63
ref|XP_006655855.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   248   9e-63
ref|XP_006838591.1| hypothetical protein AMTR_s00002p00220330 [A...   248   9e-63
gb|EXB24277.1| Ubiquitin carboxyl-terminal hydrolase 23 [Morus n...   246   3e-62
ref|XP_002329560.1| predicted protein [Populus trichocarpa] gi|5...   246   3e-62

>ref|XP_004953520.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Setaria
            italica]
          Length = 746

 Score =  261 bits (668), Expect = 6e-67
 Identities = 181/539 (33%), Positives = 274/539 (50%), Gaps = 57/539 (10%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCK--SEGFCLFCVLKQHVDKV 344
            VGAGL N+GN+C+LNA LQC+T+T PL   L ++ H+TPC    +GFC FC LK+HVD+ 
Sbjct: 200  VGAGLSNMGNTCFLNATLQCITHTVPLFLKLRSTDHSTPCSYDKDGFCSFCALKEHVDES 259

Query: 345  LSNPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEALD--TDLPSSKAAAPN 518
            +     V+ P  F  N+    LS+ FR    EDA E++ CLL+ L   T  P SK     
Sbjct: 260  IRRSGSVIMPAKFRDNLR--KLSSDFRPGQQEDAHEFLRCLLDNLHKCTLDPMSKGKG-- 315

Query: 519  DSSLQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAE 698
             SS  E+S VK +F GQ+K+Q++C  C HSSE  E  +++SL I   + + +A+ESFT  
Sbjct: 316  -SSFDEESIVKDIFGGQLKSQLSCCECGHSSETFEPFLDLSLEIDQVDHLVDAMESFTKV 374

Query: 699  EEI-ERGDGSKCEKCDQGGILKMRVTIDRAPEVLLIHLKRFIDSEN---KLNRDVQYSHI 866
            E+I +  D   CE+C+       ++T+ RAP+V+  HLKRF   +N   K+++ V Y   
Sbjct: 375  EQIGDSEDKLTCERCNAQVCKNKQLTLHRAPDVIAFHLKRFTTLDNSVEKIDKHVVYPSE 434

Query: 867  LDLKSFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISK 1046
            +DLK F+S   +  +L+Y+LYGV+ HSG   N GHY   +++S   W+ +NDS V  I+ 
Sbjct: 435  VDLKPFHSNPDTVGELKYDLYGVVEHSGLP-NYGHYVCSIRSSPSTWYLMNDSHVDSITD 493

Query: 1047 ESVLEEQAYVLCYFRRSS-EWFSHYLEPT----TNTSGVSSPKSVLE------------- 1172
             S L ++AY+L Y R+    WFS  LE         +  +SP SVLE             
Sbjct: 494  ASALNKEAYILFYVRQGKFPWFSSLLEVKDALHAEDARGASPVSVLENIDANCSTSSGGG 553

Query: 1173 -ESNPSDDSDLSDKVSPDKMHKEKTPDDNQTKLSTPSTATSSL---------------RS 1304
              SN  D  + ++    +++ K++T     +      +  SSL               R+
Sbjct: 554  SSSNSGDKLEKNEARQLEELEKDETSQYKVSFCHEEPSKRSSLGASNINNTRDEISPPRA 613

Query: 1305 KLISEMVESPLGKADSSRKQP-------RSFDSDTFVSNKKRATVDAFKSPSFP------ 1445
             L  ++V  P     ++  +P       RSF  + F   +     D   +P  P      
Sbjct: 614  SLQDDVVRCPRSVETTNLDRPSTPLPSKRSFSHNEFGVFEFEDFDDDEDTPLLPDLKFHP 673

Query: 1446 --LKPKAEQAKESPKCSPTTPSSINKVLSTMTSSRRACLLQHINQNNTSYQASKKSSTP 1616
               KPKA  A ++ K  P+   +  +++S M SSRR  LL  +     ++Q S+    P
Sbjct: 674  KAKKPKAASASKAVK-GPSIDQNARRLMSGMPSSRRKGLLDCMVTQQNAHQESRSRRCP 731


>ref|XP_006647718.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Oryza
            brachyantha]
          Length = 705

 Score =  261 bits (667), Expect = 8e-67
 Identities = 185/551 (33%), Positives = 284/551 (51%), Gaps = 54/551 (9%)
 Frame = +3

Query: 162  AHFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCK--SEGFCLFCVLKQHV 335
            +  VGAGL N+GN+C+LN+ LQC+T+T PL   L ++ H  PC    +GFC FC LK+H+
Sbjct: 159  SQLVGAGLGNMGNTCFLNSILQCVTHTVPLFLRLRSTGHYAPCSYDKDGFCSFCALKEHI 218

Query: 336  DKVLSNPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEALDTDLPSSKAAAP 515
            D+ +     V+ P  F  N+    LS+ FR    EDA E++ CLL+ LD    S   +  
Sbjct: 219  DESIRRSGSVIRPIRFRDNLK--KLSSDFRPGQQEDAHEFLRCLLDNLDK-CTSDLNSKD 275

Query: 516  NDSSLQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTA 695
              SS  EQS VK++F G++K+Q+ C  C H SE  E  +++SL I  ++ + +AL+SFT 
Sbjct: 276  KPSSFDEQSIVKQVFGGRLKSQLICCECGHCSETYEPFLDLSLEINHADHLVDALKSFTK 335

Query: 696  EEEIERGDGSK---CEKCDQGGILKMRVTIDRAPEVLLIHLKRF--IDSE-NKLNRDVQY 857
             E+I  GD  +   CE C+       ++ +DR+P+V+  HLKRF  +DS   K+++ V Y
Sbjct: 336  LEQI--GDAEEKLTCEHCNAKVCKNKQLMLDRSPDVIAFHLKRFTTLDSSIEKIDKHVVY 393

Query: 858  SHILDLKSFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTL 1037
               LDLK F+S   +  +L+Y+LYGV+ HSGS  + GHY   +++S   WH +NDS V L
Sbjct: 394  PLELDLKPFHSDPDADMELKYDLYGVVEHSGSP-SYGHYVCSVRSSPSTWHLMNDSHVDL 452

Query: 1038 ISKESVLEEQAYVLCYFRRSS-EWFSHYLEP-----TTNTSGVSSPKSVLEESN---PSD 1190
            IS+ S L ++ Y+L Y R+   +WFS  LE        NTSG +SP SVLE  +   P+ 
Sbjct: 453  ISEASALNQEGYILFYVRQGKFQWFSSLLEQKDEQHPENTSG-ASPVSVLENMDVDCPTS 511

Query: 1191 DSDLSDKVSPDKMHKEKT---PDDNQTKLSTPSTATSSLRSKLISEMVES---------- 1331
              +  +  + DK+ K++T       Q K +   +    ++  L  E+V S          
Sbjct: 512  SGEGINGTTGDKLEKDETSPCKTSFQPKEAAKESPVEPIKVDLKDEIVPSISSHHDNVII 571

Query: 1332 --PLGKADSSRKQPRSFDSDTFVSNKKRATVDAFKSPSF-------PL------KPKAEQ 1466
              P   AD +  +  S  S           +D F+   F       PL      +PKA++
Sbjct: 572  SCPGSAADINNLERPSTPSPRRKRFFSDNQLDVFEFEDFGKEDEETPLLGNHKFQPKAKK 631

Query: 1467 AKESPKC-------SPTTPSSINKVLSTMTSSRRACLLQHINQNNTSYQASKK--SSTPN 1619
            AK             P    ++ +++ +M S+RR  LL  +N    + Q S+    S P 
Sbjct: 632  AKGDSASKSMKGHKGPCIDKNVTRLVRSMPSTRRNGLLDCLNTQLNAAQDSRSCPRSDPV 691

Query: 1620 ECKGRDSTPPP 1652
              + + + P P
Sbjct: 692  RKRKKFNVPVP 702


>ref|XP_003572840.1| PREDICTED: uncharacterized protein LOC100831961 [Brachypodium
            distachyon]
          Length = 712

 Score =  257 bits (656), Expect = 1e-65
 Identities = 164/425 (38%), Positives = 236/425 (55%), Gaps = 12/425 (2%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCK--SEGFCLFCVLKQHVDKV 344
            VGAGLRN+GN+C+LNA LQC+T+T PL   L ++ H TPC    +GFC FC LK+H+++ 
Sbjct: 168  VGAGLRNMGNTCFLNATLQCITHTVPLFKKLRSTDHPTPCSYDEDGFCSFCALKEHIEES 227

Query: 345  LSNPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEALD--TDLPSSKAAAPN 518
            +     V+ P  F  N+  +     FR    EDA E++ CLL+ L   T  P SK     
Sbjct: 228  IRRSGSVLMPARFKDNLRSILY---FRPGQQEDAHEFLRCLLDNLHKCTLDPKSKG---K 281

Query: 519  DSSLQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAE 698
             SS  E+S VK++F GQ+K+Q+TC  C H SE  E  +++SL I   + +  ALESFT  
Sbjct: 282  PSSFDEESIVKRVFGGQLKSQLTCRECGHCSETSEPFLDLSLEIDQVDDLVAALESFTKV 341

Query: 699  EEIERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRFI---DSENKLNRDVQYSHI 866
            EEI   +    CE C+       R+ +D+ P+V+   LKRF     S  K+++ V Y   
Sbjct: 342  EEIGDAENKLTCESCNVQVCKGKRLLLDKTPDVIAFQLKRFTTLDHSIEKIDKHVAYPSE 401

Query: 867  LDLKSFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISK 1046
            LDLK F+S   S ++L+Y+LYGV+ HSG   N GHY   +++S   WH +NDS+V  I++
Sbjct: 402  LDLKPFHSNPVSEEELKYDLYGVVEHSGLP-NYGHYVCAIRSSPSTWHLMNDSQVDSITE 460

Query: 1047 ESVLEEQAYVLCYFRRS-SEWFSHYLEPT--TNTSGVSSPKSVLEESNPSDDSDLSDKVS 1217
             S L ++AY+L Y R+    WFS  LE    T T+  +SP SVLE+ + +D S  S+  S
Sbjct: 461  TSALHQEAYILFYVRQGIFPWFSSLLEEALHTETTSGASPVSVLEDID-ADCSTSSNISS 519

Query: 1218 PDKMHK-EKTPDDNQTKLSTPSTATSSLRSKLISEMVESPLGKADSSRKQPRSFDSDTFV 1394
             DK  K E +P         P+   +   S  +S+   SP   +  S    R   + T V
Sbjct: 520  GDKFEKDENSPCKASFLPEEPTKRCAVDASNSMSKQEISPCRASLQSDVVMRYSSNGTEV 579

Query: 1395 SNKKR 1409
            +N +R
Sbjct: 580  TNPER 584


>ref|XP_002437970.1| hypothetical protein SORBIDRAFT_10g005680 [Sorghum bicolor]
            gi|241916193|gb|EER89337.1| hypothetical protein
            SORBIDRAFT_10g005680 [Sorghum bicolor]
          Length = 917

 Score =  255 bits (652), Expect = 4e-65
 Identities = 171/520 (32%), Positives = 266/520 (51%), Gaps = 40/520 (7%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVDKVLS 350
            +GAGL NLGN+CYLN+ LQCLTYT P   YL +  H + C++ GFC  C L+ HV   L 
Sbjct: 88   IGAGLENLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRASGFCALCALQNHVKTALE 147

Query: 351  NPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEAL-DTDLPSSKAAAPNDS- 524
            +  ++V+P+    N+    +S  FR    EDA E M  LLE++    LPS     P++S 
Sbjct: 148  STGKIVTPFRIVKNLR--CISRTFRNSRQEDAHELMVNLLESMHKCCLPS---GVPSESQ 202

Query: 525  SLQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAEEE 704
            S  ++S V K+F G++++Q+ C  CSH S   +  +++SL I  + ++  ALE+FT +E 
Sbjct: 203  SAYDKSLVHKIFGGRLRSQVKCTRCSHCSNKFDPFLDLSLDIAKATTLVRALENFTEDEL 262

Query: 705  IERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRF--IDSENKLNRDVQYSHILDL 875
            ++ G    +CE+C Q  + K R TID+AP VL IHLKRF   +   K+++ V +   LDL
Sbjct: 263  LDGGQKQYQCERCRQKVVAKKRFTIDKAPNVLTIHLKRFSPFNPREKIDKKVDFQPSLDL 322

Query: 876  KSFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISKESV 1055
            K F S  +   D +Y LYGVLVH+G    SGHYY  ++TS G+WH+L+D++V  + +  V
Sbjct: 323  KPFVSDSKG-TDFKYSLYGVLVHTGWNTQSGHYYCFVRTSSGMWHNLDDNKVRQVREADV 381

Query: 1056 LEEQAYVLCYFRRS-SEWFSHYLEPTTNTSGVSSPKSVLEESNPSDDSDLSDKVS----- 1217
            L+++AY+L Y R S  +  +H    T N     +P+ +   +  +  S  +  ++     
Sbjct: 382  LKQKAYMLFYVRNSIGKSVAHKENITANLPMKKTPEKISSLNGITQSSVKAQNLNGVSRF 441

Query: 1218 PDKMHK---------EKTPDDNQTKLSTPS-TATSSLRSKLISEMVESPLGKADSSRKQP 1367
             DK H           KT   + +K    +  A +S  + L S           + R +P
Sbjct: 442  GDKAHNTIIGYSTIFSKTTTGHCSKNEVKAEDAPASQNNALPSRQAPGTQNDGGTLRTKP 501

Query: 1368 RSFDSDT-----------FVSNKKRATVDAFKSPSFPLKPKAEQAKESPKCS-----PTT 1499
              FD ++           F +     TV     PS  ++PKA   K++   S       T
Sbjct: 502  MQFDVNSQETASSHQPAPFTNTCGEQTV--VGKPSQEMEPKAGAGKDTSVVSAIANGAAT 559

Query: 1500 PSSINKVLSTMTSSRRACLLQHINQNNTSYQA---SKKSS 1610
             S  +K+ S   ++  + +  H+N     + A   SKK S
Sbjct: 560  LSKADKLTSQPQTTPFSEVAPHVNGTAAEFAARSLSKKDS 599


>gb|AFW85556.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
            [Zea mays]
          Length = 903

 Score =  254 bits (650), Expect = 7e-65
 Identities = 131/313 (41%), Positives = 193/313 (61%), Gaps = 4/313 (1%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVDKVLS 350
            +GAGL NLGN+CYLN+ LQCLTYT P   YL +  HT+ C++ GFC  C L+ HV   L 
Sbjct: 88   IGAGLENLGNTCYLNSVLQCLTYTEPFAAYLQSGKHTSSCRTSGFCALCALQIHVKTALE 147

Query: 351  NPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEAL-DTDLPSSKAAAPNDSS 527
            +  ++V+P+    N+    +S  FR    EDA E M  LLE++    LPS    +    S
Sbjct: 148  STGKIVTPFRIVKNLR--CISRTFRNSRQEDAHELMVNLLESMHKCCLPS--GVSTESQS 203

Query: 528  LQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAEEEI 707
              ++S V K+F G++++Q+ C  C H S   +  +++SL I  + ++  ALE+FT +E +
Sbjct: 204  AYDKSLVHKIFGGRLRSQVKCTRCLHCSNKFDPFLDLSLEIAKATTLVRALENFTEDELL 263

Query: 708  ERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRF--IDSENKLNRDVQYSHILDLK 878
            + G    +CE+C Q  + K R+TID+AP VL IHLKRF   +   K+++ V +  ILDLK
Sbjct: 264  DEGQKEYECERCRQKVVAKKRLTIDKAPNVLTIHLKRFSPFNPREKIDKKVDFQSILDLK 323

Query: 879  SFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISKESVL 1058
             F S  +   D +Y LYGVLVH+G +  SGHYY  ++TS G+WH+L+D EV  + +  VL
Sbjct: 324  PFVSDSKG-TDFKYSLYGVLVHTGWSTQSGHYYCYVRTSSGMWHNLDDKEVRQVREADVL 382

Query: 1059 EEQAYVLCYFRRS 1097
            +++AY+L Y R S
Sbjct: 383  KQKAYMLFYVRNS 395


>gb|AFW63451.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
            [Zea mays]
          Length = 591

 Score =  254 bits (648), Expect = 1e-64
 Identities = 186/545 (34%), Positives = 278/545 (51%), Gaps = 57/545 (10%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCK--SEGFCLFCVLKQHVDKV 344
            VGAGL N+GN+C+LNA LQC+T+T PL   L ++ H+TPC    +GFC FC LK+HVD+ 
Sbjct: 42   VGAGLSNMGNTCFLNATLQCITHTVPLFLKLRSTDHSTPCSYNKDGFCSFCALKEHVDES 101

Query: 345  LSNPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEALD--TDLPSSKAAAPN 518
            +     V++P  F  N+    LS+ F     EDA E++ CLL+ L   T  P SK     
Sbjct: 102  IQRSGSVIAPAKFRDNLR--KLSSDFWPGQQEDAHEFLRCLLDNLHKCTLDPMSKGKG-- 157

Query: 519  DSSLQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAE 698
             SS  E+S V ++F GQ+K+ ++C  C HSSE  E  +++SL I   + + +AL+SFT  
Sbjct: 158  -SSFDEESIVNEIFGGQLKSHLSCCECGHSSETFEPFLDLSLEIDQVDHLVDALQSFTKV 216

Query: 699  EEIERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRFIDSEN---KLNRDVQYSHI 866
            E+I   +    CE C+       ++T+ RAP+V+  HLKRF   +N   K+++ V Y   
Sbjct: 217  EQIGDSENKLTCESCNAQVSKNKQLTLHRAPDVIAFHLKRFTTLDNSVEKIDKHVVYPLE 276

Query: 867  LDLKSFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISK 1046
            +DLK F+S   +   L+Y+LYGV+ HSG   N GHY   +++S   W+ +NDS+V   + 
Sbjct: 277  VDLKPFHSNPDTVGGLKYDLYGVVEHSGLP-NYGHYTCTIRSSPSTWYFMNDSKVDSCTD 335

Query: 1047 ESVLEEQAYVLCYFRRSS-EWFSHYLE-----PTTNTSGVSSPKSVLEESNPSDDSDL-- 1202
             S L ++AY+L Y R+    WFS  LE        NT G SSP SVLE  + +  +    
Sbjct: 336  SSALNQEAYILFYVRQGKFPWFSSLLEGKDALQAENTCG-SSPVSVLENIDANCSTSFAG 394

Query: 1203 -SDKVSPDKMHK------EKTPDDNQTKL------STPSTATSSLRSKLISEMVESPLGK 1343
             S   S DK+ K      E+T  D   +         PST +S   S   + + E+   +
Sbjct: 395  GSGSSSGDKLEKNEASQLEETEKDEMGRYKPSFLPEEPSTRSSLGASNSNNTIDENNPPR 454

Query: 1344 A------------------DSSRKQPRS----FDSDTFVSN-KKRATVDAFKSPSFPLKP 1454
            A                  D     PRS    FD++  V   +     D    P+  L P
Sbjct: 455  ASLQNDVATCLRCVETTNLDKPSTPPRSKRLAFDNEFSVFEFEDFGEEDETLFPNLKLTP 514

Query: 1455 KAEQAK----ESPKCSPTTPSSINKVLSTMTSSRRACLLQHINQNNTSYQASK-KSSTPN 1619
            KA++AK       +  P    +  +++  MTS+RR  L+  I Q    +++S+  +S P 
Sbjct: 515  KAKKAKAASASKAEKGPCIDQNAVRLMRGMTSTRRKGLMDCIAQQTAKHESSRYPASDPL 574

Query: 1620 ECKGR 1634
            + K R
Sbjct: 575  DKKKR 579


>dbj|BAD72518.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica Group]
          Length = 874

 Score =  252 bits (643), Expect = 5e-64
 Identities = 165/496 (33%), Positives = 257/496 (51%), Gaps = 15/496 (3%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVDKVLS 350
            +GAGL+NLGN+CYLN+ LQCLTYT P   YL +  H + C++ GFC  C L+ HV   L 
Sbjct: 57   IGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQ 116

Query: 351  NPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEAL-DTDLPSSKAAAPNDS- 524
            +  ++V+P     N+  +S S  FR    EDA E M  LLE++    LPS     P++S 
Sbjct: 117  STGKIVTPSQIVKNLRCISRS--FRNSRQEDAHELMVNLLESMHKCCLPS---GVPSESP 171

Query: 525  SLQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAEEE 704
            S  E+S V K+F G++++Q+ C  CSH S   +  +++SL IG + S+  AL++FTAEE 
Sbjct: 172  SAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEEL 231

Query: 705  IERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRF--IDSENKLNRDVQYSHILDL 875
            ++ G+   +C++C +  + K + TID+AP VL IHLKRF   +   K+++ V +  +LDL
Sbjct: 232  LDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDL 291

Query: 876  KSFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISKESV 1055
            K F S  +   D +Y LYGVLVH+G    SGHYY  ++TS G+WH+L+D++V  + +  V
Sbjct: 292  KPFISDSKG-ADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADV 350

Query: 1056 LEEQAYVLCYFRRSSEWFSHYLEPTTNTSGVSSPKSVLEESNPSDDSDLSDKVSPD---- 1223
            L ++AY+L Y R           PT     +++       + P   S LSD +       
Sbjct: 351  LRQKAYMLFYVR------DRVGNPTPRKDNITA-NMPARRTIPEKISGLSDMIQSGVIEA 403

Query: 1224 KMHKEKTP--DDNQTKLSTPSTATSSLRSKLISEMVESPLGKADSSRKQPRSFDSDTFVS 1397
            K++   +P  D     +S  ++  +S    L          K D   + P++ +++   S
Sbjct: 404  KLNGSSSPYGDKRLHGISNGNSIKTSREHYL----------KKDGKTEAPKASENNGLAS 453

Query: 1398 NKKRATVD----AFKSPSFPLKPKAEQAKESPKCSPTTPSSINKVLSTMTSSRRACLLQH 1565
             +K +          + S  +     + +  PK    T +S     + + S R     QH
Sbjct: 454  TQKASAPQIDGATLSAQSKQITSTGHREELQPKVDGLTDTSSLGNGNAILSERNKQTSQH 513

Query: 1566 INQNNTSYQASKKSST 1613
              QN  S  AS    T
Sbjct: 514  --QNPFSMPASHGKDT 527


>ref|NP_001056992.1| Os06g0184300 [Oryza sativa Japonica Group]
            gi|55773912|dbj|BAD72517.1| putative ubiquitin-specific
            protease 23 [Oryza sativa Japonica Group]
            gi|113595032|dbj|BAF18906.1| Os06g0184300 [Oryza sativa
            Japonica Group]
          Length = 899

 Score =  251 bits (642), Expect = 6e-64
 Identities = 132/312 (42%), Positives = 197/312 (63%), Gaps = 5/312 (1%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVDKVLS 350
            +GAGL+NLGN+CYLN+ LQCLTYT P   YL +  H + C++ GFC  C L+ HV   L 
Sbjct: 57   IGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQ 116

Query: 351  NPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEAL-DTDLPSSKAAAPNDS- 524
            +  ++V+P     N+  +S S  FR    EDA E M  LLE++    LPS     P++S 
Sbjct: 117  STGKIVTPSQIVKNLRCISRS--FRNSRQEDAHELMVNLLESMHKCCLPS---GVPSESP 171

Query: 525  SLQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAEEE 704
            S  E+S V K+F G++++Q+ C  CSH S   +  +++SL IG + S+  AL++FTAEE 
Sbjct: 172  SAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEEL 231

Query: 705  IERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRF--IDSENKLNRDVQYSHILDL 875
            ++ G+   +C++C +  + K + TID+AP VL IHLKRF   +   K+++ V +  +LDL
Sbjct: 232  LDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDL 291

Query: 876  KSFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISKESV 1055
            K F S  +   D +Y LYGVLVH+G    SGHYY  ++TS G+WH+L+D++V  + +  V
Sbjct: 292  KPFISDSKG-ADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADV 350

Query: 1056 LEEQAYVLCYFR 1091
            L ++AY+L Y R
Sbjct: 351  LRQKAYMLFYVR 362


>gb|EEE65221.1| hypothetical protein OsJ_20367 [Oryza sativa Japonica Group]
          Length = 940

 Score =  251 bits (642), Expect = 6e-64
 Identities = 132/312 (42%), Positives = 197/312 (63%), Gaps = 5/312 (1%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVDKVLS 350
            +GAGL+NLGN+CYLN+ LQCLTYT P   YL +  H + C++ GFC  C L+ HV   L 
Sbjct: 98   IGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQ 157

Query: 351  NPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEAL-DTDLPSSKAAAPNDS- 524
            +  ++V+P     N+  +S S  FR    EDA E M  LLE++    LPS     P++S 
Sbjct: 158  STGKIVTPSQIVKNLRCISRS--FRNSRQEDAHELMVNLLESMHKCCLPS---GVPSESP 212

Query: 525  SLQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAEEE 704
            S  E+S V K+F G++++Q+ C  CSH S   +  +++SL IG + S+  AL++FTAEE 
Sbjct: 213  SAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEEL 272

Query: 705  IERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRF--IDSENKLNRDVQYSHILDL 875
            ++ G+   +C++C +  + K + TID+AP VL IHLKRF   +   K+++ V +  +LDL
Sbjct: 273  LDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDL 332

Query: 876  KSFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISKESV 1055
            K F S  +   D +Y LYGVLVH+G    SGHYY  ++TS G+WH+L+D++V  + +  V
Sbjct: 333  KPFISDSKG-ADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADV 391

Query: 1056 LEEQAYVLCYFR 1091
            L ++AY+L Y R
Sbjct: 392  LRQKAYMLFYVR 403


>gb|EEC80142.1| hypothetical protein OsI_21934 [Oryza sativa Indica Group]
          Length = 940

 Score =  251 bits (642), Expect = 6e-64
 Identities = 132/312 (42%), Positives = 197/312 (63%), Gaps = 5/312 (1%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVDKVLS 350
            +GAGL+NLGN+CYLN+ LQCLTYT P   YL +  H + C++ GFC  C L+ HV   L 
Sbjct: 98   IGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQ 157

Query: 351  NPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEAL-DTDLPSSKAAAPNDS- 524
            +  ++V+P     N+  +S S  FR    EDA E M  LLE++    LPS     P++S 
Sbjct: 158  STGKIVTPSQIVKNLRCISRS--FRNSRQEDAHELMVNLLESMHKCCLPS---GVPSESP 212

Query: 525  SLQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAEEE 704
            S  E+S V K+F G++++Q+ C  CSH S   +  +++SL IG + S+  AL++FTAEE 
Sbjct: 213  SAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEEL 272

Query: 705  IERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRF--IDSENKLNRDVQYSHILDL 875
            ++ G+   +C++C +  + K + TID+AP VL IHLKRF   +   K+++ V +  +LDL
Sbjct: 273  LDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDL 332

Query: 876  KSFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISKESV 1055
            K F S  +   D +Y LYGVLVH+G    SGHYY  ++TS G+WH+L+D++V  + +  V
Sbjct: 333  KPFISDSKG-ADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADV 391

Query: 1056 LEEQAYVLCYFR 1091
            L ++AY+L Y R
Sbjct: 392  LRQKAYMLFYVR 403


>ref|XP_004954214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Setaria
            italica]
          Length = 1085

 Score =  250 bits (639), Expect = 1e-63
 Identities = 178/581 (30%), Positives = 288/581 (49%), Gaps = 29/581 (4%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVDKVLS 350
            +GAGL NLGN+CYLN+ LQCLTYT P V YL +S H + C++ GFC  C L+ HV   L 
Sbjct: 91   IGAGLHNLGNTCYLNSVLQCLTYTEPFVAYLQSSKHNSSCRAAGFCALCALQDHVTSALR 150

Query: 351  NPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEALDTD-LPSSKAAAPNDSS 527
            +  ++++P  F  N+  +S S  FR    EDA E M  LLE++    LPS    +    S
Sbjct: 151  STGKILTPLLFVKNLRCISRS--FRNTRQEDAHELMVSLLESMHKSCLPS--GISSESPS 206

Query: 528  LQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAEEEI 707
              E+S V ++F G++++Q+ C  CSH S   +  +++SL IG + ++ +AL +FT EE +
Sbjct: 207  AYERSLVHRIFGGRLRSQVRCTKCSHCSNKFDPFLDLSLEIGNAATLMKALYNFTEEELL 266

Query: 708  ERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRF--IDSENKLNRDVQYSHILDLK 878
            + G+    C++C Q  + K R  ID+AP VL IHLKRF   +   K+++ V +   L+LK
Sbjct: 267  DGGEKHYNCQQCKQKVVAKKRFLIDKAPSVLTIHLKRFSPFNPLQKIDKKVDFQTTLNLK 326

Query: 879  SFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISKESVL 1058
             F S  +   DL+Y LYGVLVH+G    SGHYY  ++TS G+WH+L+D+EV  + +  VL
Sbjct: 327  PFVSNSEG-MDLKYSLYGVLVHAGWNTQSGHYYCFVRTSSGLWHNLDDNEVRQVREADVL 385

Query: 1059 EEQAYVLCYFRRSSEWFSHYLEPTTNTSGVSSPKSVLEESNPSDDS----------DLSD 1208
             ++AY+L Y R      S  ++     + +S  K + E+    + +          D S 
Sbjct: 386  RQKAYMLFYVRDKVR--SAVIQKDNGDASLSEKKIISEKITCMNGAIRNGLVEKTLDFST 443

Query: 1209 KVSPDKMHKEKTPDDNQ-TKLSTPSTATSSLRSKLISEMVESPLGKADSSRKQPRSFDS- 1382
                D   ++  PD  Q + +S  S    S     I  +  S      S +K P +    
Sbjct: 444  IAKEDIKLQKHDPDKGQPSDISATSQDQCSNEHSSIEVINASTSQNNVSVQKAPHTLPDG 503

Query: 1383 -DTFVSNKKRATVDAFKSPSFPLKPKA-EQAKESPKCSPT--TPSSINKVLSTMTSSRRA 1550
             DT  +  ++  +   +    P +P       +S K +P    PS+I+       +S+  
Sbjct: 504  VDTLSTKAEQIALSVQRETMSPGQPDVFILDMKSQKLNPDDGQPSNIS------ATSQDQ 557

Query: 1551 CLLQHINQNNTSYQASKKSSTPNE--CKGRDSTPPPYKSKEGLSYSNGMRTKMGE----- 1709
            C  +H +   T    S+ +    +  C   D T    K+++    S    T   +     
Sbjct: 558  CSNEHGSTEVTKASTSQNNEPVQKATCSHLDGTATSTKTEQTAPASQRETTFTAQPDACV 617

Query: 1710 --DSDSKRQSQFTTPMRGKRCSTENAVQNAETPEKAGQFKL 1826
              D++S  Q  +  P++  +  ++ A+ ++     A  F+L
Sbjct: 618  LCDANSD-QKAYEKPLQELQLESDGALTDSGKGIPASAFQL 657


>ref|XP_006857223.1| hypothetical protein AMTR_s00065p00205690 [Amborella trichopoda]
            gi|548861306|gb|ERN18690.1| hypothetical protein
            AMTR_s00065p00205690 [Amborella trichopoda]
          Length = 1059

 Score =  249 bits (637), Expect = 2e-63
 Identities = 164/505 (32%), Positives = 267/505 (52%), Gaps = 13/505 (2%)
 Frame = +3

Query: 165  HFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVDKV 344
            H +GAGL NLGN+C+LN+ LQCLTYT PL  YL +  H + C   GFC  C ++ HV   
Sbjct: 101  HRIGAGLANLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKSSCHMAGFCAMCAIQNHVMSA 160

Query: 345  LSNPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEAL-DTDLPSSKAAAPND 521
            L +  +++SP +   N+    +S  FR    EDA EYM  L+E +    LPS        
Sbjct: 161  LRSSGKILSPNHLVRNLR--CISRNFRNSRQEDAHEYMVNLMECMHKCCLPS--GVLSES 216

Query: 522  SSLQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAEE 701
                E+S V K+F G++++Q+ C  CSH S   +  +++SL I  ++S+ +AL  FTA E
Sbjct: 217  PGAYEKSLVHKIFGGRLQSQVKCTQCSHESNTFDPFLDLSLEIVKADSVRKALAHFTARE 276

Query: 702  EIERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRFIDS--ENKLNRDVQYSHILD 872
            +++ G+   +C++C++      ++TI +AP VL IHLKRF       K+++ VQ+   L+
Sbjct: 277  QLDGGEKQYQCDRCNKKVRAFKQLTIHKAPYVLTIHLKRFSPDGMGGKIDKMVQFGSNLE 336

Query: 873  LKSFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISKES 1052
            LK F SGQ    DL+Y LYGVLVH+G + +SGHYY  ++TS GIWH+L+D+ V  +S++ 
Sbjct: 337  LKPFVSGQYD-VDLRYTLYGVLVHAGWSTHSGHYYCFIRTSSGIWHALDDNRVYQVSEKF 395

Query: 1053 VLEEQAYVLCY-FRRSSEWFSHYLEPTTNTSGVSS--PKSVLEESNPSDDSDLSDKVSPD 1223
            VL+++AY+L Y   R        ++ T   +G++S   K  L  S+ + ++  S K++  
Sbjct: 396  VLQQKAYMLFYVLDRKRSLQRKLVDATHRENGLASAMEKKGLHASSLNANAKESMKIASK 455

Query: 1224 KMHKEKTPDDNQTKLSTPSTATSSLRSKLISEMVESPLGKADSSRKQPRSFDSDTFVSNK 1403
            +       + +   +S P    S  + +L S   E+  G   +  + P         SN 
Sbjct: 456  ENGLASAMEKSLLHISLPK-VNSDAKERLKSGSNEN--GLESAMERNPLHISPSNANSNA 512

Query: 1404 KRAT-VDAFKSPSFPLKPKAEQAK-ESPKCSPTTPSSINKVLSTMTSSRRACLLQHINQN 1577
            + +T +D  +S  F     +  A+   P C   + S++  +      +R     ++ N N
Sbjct: 513  RESTRIDNTESTQFTAGHLSIMAELNGPDCHAGSSSTVGAI----EGNRFRASAENGNDN 568

Query: 1578 NTSYQASKKSSTP----NECKGRDS 1640
            +++++     S P     E  GR S
Sbjct: 569  DSNHRDGSHMSEPAKSVKEANGRTS 593


>ref|XP_003572898.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like
            [Brachypodium distachyon]
          Length = 1051

 Score =  249 bits (637), Expect = 2e-63
 Identities = 141/399 (35%), Positives = 229/399 (57%), Gaps = 12/399 (3%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVDKVLS 350
            +GAGL+NLGN+CYLN+ LQCLTYT P V YL +  H + C++ GFC  C L+ HV   L 
Sbjct: 80   IGAGLQNLGNTCYLNSVLQCLTYTEPFVAYLQSGKHKSSCRTAGFCALCALQNHVRCALQ 139

Query: 351  NPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEAL-DTDLPSSKAAAPNDSS 527
            +  ++++P  F  N+  +S S  FR Y  EDA E M  LLE++    LPS   +     S
Sbjct: 140  STGKILTPMQFVKNLRCISRS--FRNYRQEDAHELMVNLLESMHKCCLPSGMPS--QSPS 195

Query: 528  LQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAEEEI 707
              E+S V ++F G++++Q+ C +CSH S   +  +++SL I  + ++ +AL++FT EE +
Sbjct: 196  AYEKSLVHRIFGGRLRSQVKCVSCSHCSSKFDPFLDLSLEIANAATLVKALQNFTEEELL 255

Query: 708  ERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRF--IDSENKLNRDVQYSHILDLK 878
            + G+    C+ C Q    K R TID+AP+VL IHLKRF   +  +K+++ V +   LDLK
Sbjct: 256  DDGEKQYNCQHCRQKVAAKKRFTIDKAPDVLTIHLKRFSPFNPRHKIDKKVDFQPTLDLK 315

Query: 879  SFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISKESVL 1058
             F S  +   D +Y LYGVLVH+G    +GHYY  ++TS G+WH+L+D++V  + +  VL
Sbjct: 316  PFVSNSED-MDFRYNLYGVLVHAGWNTQAGHYYCFVRTSSGMWHNLDDNQVHQVREADVL 374

Query: 1059 EEQAYVLCYFR---RSSEWF-----SHYLEPTTNTSGVSSPKSVLEESNPSDDSDLSDKV 1214
             ++AY+L Y R   RSS  F     ++Y +       ++        S      ++S  +
Sbjct: 375  RQKAYMLFYVRDRVRSSVIFKDNGAANYYKKNPIPEKITCMNGTNRNSLMETTLNVSPFI 434

Query: 1215 SPDKMHKEKTPDDNQTKLSTPSTATSSLRSKLISEMVES 1331
            + D   +++  D++ + +   S+     ++    E++E+
Sbjct: 435  NGDVKSQKQNSDNDHSSIFGSSSRGQCSKNPSNIEVIEA 473


>gb|AAO72607.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
          Length = 842

 Score =  249 bits (637), Expect = 2e-63
 Identities = 132/311 (42%), Positives = 196/311 (63%), Gaps = 5/311 (1%)
 Frame = +3

Query: 174  GAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVDKVLSN 353
            GAGL+NLGN+CYLN+ LQCLTYT P   YL +  H + C++ GFC  C L+ HV   L +
Sbjct: 1    GAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQS 60

Query: 354  PREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEAL-DTDLPSSKAAAPNDS-S 527
              ++V+P     N+  +S S  FR    EDA E M  LLE++    LPS     P++S S
Sbjct: 61   TGKIVTPSQIVKNLRCISRS--FRNSRQEDAHELMVNLLESMHKCCLPS---GVPSESPS 115

Query: 528  LQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAEEEI 707
              E+S V K+F G++++Q+ C  CSH S   +  +++SL IG + S+  AL++FTAEE +
Sbjct: 116  AYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELL 175

Query: 708  ERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRF--IDSENKLNRDVQYSHILDLK 878
            + G+   +C++C +  + K + TID+AP VL IHLKRF   +   K+++ V +  +LDLK
Sbjct: 176  DGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLK 235

Query: 879  SFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISKESVL 1058
             F S      +L+Y LYGVLVH+G    SGHYY  ++TS G+WH+L+D++V  + +  VL
Sbjct: 236  PFIS-DSKVSNLKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVL 294

Query: 1059 EEQAYVLCYFR 1091
             ++AY+L Y R
Sbjct: 295  RQKAYMLFYVR 305


>ref|XP_004964661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Setaria
            italica]
          Length = 902

 Score =  248 bits (634), Expect = 5e-63
 Identities = 130/314 (41%), Positives = 197/314 (62%), Gaps = 5/314 (1%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVDKVLS 350
            +GAGL+NLGN+CYLN+ LQCLTYT P   YL +  H + C++ GFC  C L++HV   L 
Sbjct: 88   IGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHGSSCRTSGFCALCALQKHVKTALQ 147

Query: 351  NPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEAL-DTDLPSSKAAAPNDS- 524
            +  ++V+P     N+  +S S  FR    EDA E M  LLE++    LPS     P++S 
Sbjct: 148  STGKIVTPSLIVKNLRCISRS--FRNSRQEDAHELMVNLLESMHKCCLPS---GVPSESQ 202

Query: 525  SLQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAEEE 704
            S  ++S V K+F G++++Q+ C  CSH S   +  +++SL I  + ++  AL++FT EE 
Sbjct: 203  SAYDKSLVHKIFGGRLRSQVKCTRCSHCSNKFDPFLDLSLDIAKATTLVRALQNFTEEEL 262

Query: 705  IERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRF--IDSENKLNRDVQYSHILDL 875
            ++ G    +C++C Q  + K R TID+AP VL +HLKRF   +   K+++ V +  +LDL
Sbjct: 263  LDGGQKQYQCDRCRQKVVAKKRFTIDKAPNVLTVHLKRFSPFNPREKIDKKVDFQPVLDL 322

Query: 876  KSFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISKESV 1055
            K F S  +   D +Y LYGVLVH+G    SGHYY  ++TS G+WH+L+D++V  + +  V
Sbjct: 323  KPFVSDSKG-TDFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADV 381

Query: 1056 LEEQAYVLCYFRRS 1097
            L+++AY+L Y R S
Sbjct: 382  LKQKAYMLFYVRDS 395


>ref|XP_003564195.1| PREDICTED: uncharacterized protein LOC100826635 [Brachypodium
            distachyon]
          Length = 895

 Score =  248 bits (634), Expect = 5e-63
 Identities = 156/447 (34%), Positives = 245/447 (54%), Gaps = 22/447 (4%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVDKVLS 350
            +GAGL+NLGN+CYLN+ LQCLTYT P   YL +  H + C++ GFC  C L+ HV   L 
Sbjct: 51   IGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGRHKSSCRTAGFCALCALQNHVKTALQ 110

Query: 351  NPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEAL-DTDLPSSKAAAPNDS- 524
            +  ++V+P     N+  +S S  FR    EDA E M  LLE++    LPS     P++S 
Sbjct: 111  STGKIVTPSQIVKNLRCISRS--FRNSRQEDAHELMVNLLESMHKCCLPS---GVPSESP 165

Query: 525  SLQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAEEE 704
            S  E+S V ++F G++++Q+ C  CSH S   +  +++SL I  ++++  AL++FT +E 
Sbjct: 166  SAYEKSLVHRIFGGRLRSQVKCTRCSHCSNKFDPFLDLSLDIAKASNLVRALQNFTEDEL 225

Query: 705  IERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRF--IDSENKLNRDVQYSHILDL 875
            ++ G    +CE+C Q  + K R TIDRAP VL IHLKRF   +  +K+++ V +  +LDL
Sbjct: 226  LDGGQKQYQCERCRQKVVAKKRFTIDRAPNVLTIHLKRFSPFNPRDKIDKKVDFQPVLDL 285

Query: 876  KSFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISKESV 1055
            K F S      D +Y LYGVLVH+G     GHYY  ++TS G+WH+L+D++V  + +  V
Sbjct: 286  KPFVS-DSKVSDYKYSLYGVLVHAGWNTQCGHYYCFVRTSSGMWHNLDDNQVRQVREADV 344

Query: 1056 LEEQAYVLCYFRRSSEWFSHYLEPTTNTSGVSSPKSV-LEESNPSDDSDLSDKVSPD--- 1223
            L+++AY+L Y R          +   +T     P +V +++ NP   S L+  +      
Sbjct: 345  LKQKAYMLFYVR----------DRVVDTVARKDPPNVPVKKMNPGKISCLNGGIQSGAIE 394

Query: 1224 -KMHKEKTPDDNQTKLSTPSTATSSLRSKLISEMVESPLGKAD-----------SSRKQP 1367
             K+    +P  ++ KL + S   S + S    +   +  GK +           +++K P
Sbjct: 395  AKLSGLSSPSVDK-KLQSISIGHSGVGSMTSVDRCSNNDGKTENPAASQNTMLSTAQKGP 453

Query: 1368 RSFDSDTFVSNK-KRATVDAFKSPSFP 1445
             S + D  +S K K+  +   K  S P
Sbjct: 454  LSQNDDATLSTKSKQVALSDHKETSSP 480


>ref|XP_006655855.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Oryza
            brachyantha]
          Length = 902

 Score =  248 bits (632), Expect = 9e-63
 Identities = 174/566 (30%), Positives = 279/566 (49%), Gaps = 8/566 (1%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVDKVLS 350
            +GAGL+NLGN+CYLN+ LQCLTYT P V YL +  H + C++ GFC  C L+ HV   L 
Sbjct: 46   IGAGLQNLGNTCYLNSVLQCLTYTEPFVAYLQSGKHKSSCRTAGFCALCALQNHVKTALQ 105

Query: 351  NPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEAL-DTDLPSSKAAAPNDS- 524
            +  ++V+P     N+    +S  FR    EDA E M  LLE++    LPS     P++S 
Sbjct: 106  STGKIVTPSQIVKNLR--CISRGFRNSRQEDAHELMVNLLESMHKCCLPS---GVPSESP 160

Query: 525  SLQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAEEE 704
            S  E+S V K+F G++++Q+ C  CSH S   +  +++SL I  + ++  AL++FT +E 
Sbjct: 161  SAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIARATTLVRALQNFTEDEL 220

Query: 705  IERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRF--IDSENKLNRDVQYSHILDL 875
            ++ G+   +C++C +  + K + TID+AP VL IHLKRF   +   K+++ V +  +LDL
Sbjct: 221  LDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDL 280

Query: 876  KSFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISKESV 1055
            K F S  +   D +Y LYGVLVH+G    SGHY+  ++TS G+WH+L+D++V  + +  V
Sbjct: 281  KPFISDSKG-TDYKYSLYGVLVHAGWNTQSGHYFCFVRTSSGMWHNLDDNQVRQVREADV 339

Query: 1056 LEEQAYVLCYFRRSSEWFSHYLEPTTNTSGVSSPKSVLEESNPSDDSDLSDKVS-PDKMH 1232
            L+++AY+L Y R              +T G S P+     +N      + +++S P+ + 
Sbjct: 340  LKQKAYMLFYVR--------------DTVGNSMPRKDSSTANMPAKKTMPERISGPNGLI 385

Query: 1233 KEKTPDDNQTKLSTPSTATSSLRSKLISEMVESPLGK--ADSSRKQPRSFDSDTFVSNKK 1406
            +       + KL+  S+     R   IS    S + K  AD   K     ++     NK 
Sbjct: 386  QSGV---MEAKLNDSSSTYRDKRLHSISNGNSSIMNKTSADYCSKNDGKTEAPGAPENKD 442

Query: 1407 RATVDAFKSPSFPLKPKAEQAKESPKCSPTTPSSINKVLSTMTSSRRACLLQHINQNNTS 1586
             A+     +P       + Q K      P           T  S + A L+  I +   +
Sbjct: 443  LASRQKALAPQIDDATLSAQPKHIASTGPR---------GTSLSDQSASLIHVIGKQAMA 493

Query: 1587 YQASKKSSTPNECKGRDSTPPPYKSKEGLSYSNGMRTKMGEDSDSKRQSQFTTPMRGKRC 1766
               S++    ++    DS      S    S +NG       D+   +Q   T+P      
Sbjct: 494  LVPSQEVQPKSDGLSTDSGHKTVTS----SVANG-------DATLSKQDNQTSPHHKTFS 542

Query: 1767 STENAVQNAETPEKAGQFKLKDQMLN 1844
               + V   +T   A  F  KD +++
Sbjct: 543  KLASHVNGTDTGLAAQIFPTKDAIVS 568


>ref|XP_006838591.1| hypothetical protein AMTR_s00002p00220330 [Amborella trichopoda]
            gi|548841097|gb|ERN01160.1| hypothetical protein
            AMTR_s00002p00220330 [Amborella trichopoda]
          Length = 833

 Score =  248 bits (632), Expect = 9e-63
 Identities = 177/552 (32%), Positives = 270/552 (48%), Gaps = 45/552 (8%)
 Frame = +3

Query: 159  PAHFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVD 338
            P   +GAGL NLGN+C++NA +QC+T+T PL+  L    H  P +S+GFC  C L++HVD
Sbjct: 182  PPSPMGAGLVNLGNTCFMNAVMQCITHTAPLLLSLQTCSHVCPGESDGFCALCYLREHVD 241

Query: 339  KVLSNPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEALDTDLPSSKAAAPN 518
              LS     V P     N++   + + F  +  EDA E++HC L+ L   +    A+   
Sbjct: 242  WCLSRSGGCVHPRYLVENLN--KICSSFEVFQQEDAHEFLHCFLDKLHECVKPPNASL-- 297

Query: 519  DSSLQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAE 698
              S Q  SFV ++F G +++++ C NC H S+  ES++ +SL I  + ++  AL+SFT  
Sbjct: 298  --SRQSDSFVTQIFGGHIRSRVRCHNCGHCSDTYESSLGLSLEIDEAETLYAALKSFTKV 355

Query: 699  EEIERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRF-IDSEN--KLNRDVQYSHI 866
            E I+  +    C+ C Q   ++ ++ +D+AP V   HLKRF  D  N  K+ + V+Y   
Sbjct: 356  ETIDDPEVKFGCDGCKQQVSVEKQLALDQAPAVATFHLKRFQNDGSNVEKVCKFVEYPLE 415

Query: 867  LDLKSFY-SGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLIS 1043
            LDL+ F  S Q    D  Y+LY VLVHSG++ N GHY+  + +S   WH L+D++V   +
Sbjct: 416  LDLQPFICSSQSDTDDFLYDLYAVLVHSGNSYNYGHYFCFICSSPDSWHRLDDTQVRRSN 475

Query: 1044 KESVLEEQAYVLCYFRRSSEWFSHYLEPTTNTSGV----SSPKSVLEESNPSDDSDLSDK 1211
             + VL ++AY+L Y RR   WFS+ +E       +    SSPKSVLEES          K
Sbjct: 476  AKYVLNQEAYILFYKRRGVPWFSNLMETQRKCEEINHSSSSPKSVLEES----------K 525

Query: 1212 VSPDKMHKEKTPDDNQTKLST-----------PSTATSSLRSK----------------- 1307
            VSP +  +E +   + T ++T           P     S++SK                 
Sbjct: 526  VSPPR-PEECSSSGSDTDVATTSISIPACPMAPHPLIPSMQSKHKEDHAKDHANQDFCHA 584

Query: 1308 -LISEMVESPLGKADSSRKQPRSFDSDTFVSNKKRATVDAFKSPSFPLKPKAEQAKESPK 1484
             +I   V   +G       QP+   S      K+   +   +S    L P        P 
Sbjct: 585  PMIPRSVNLKVGMTPMPTSQPKESSSTPESLPKESLPITQSRSKESLLTPGPR-----PN 639

Query: 1485 CSPTTPSSINKVLSTMTSSRRA----CLLQHINQNNTSYQASKK---SSTPNECKGRDST 1643
             SP   +S+ K+L  M   RR+    CL+    +++ +   SKK   SS+    K  D T
Sbjct: 640  ESPVISTSVKKLLDKMPMGRRSGLTRCLMDSEPRSDGALMNSKKRKVSSSSPPWKLTDLT 699

Query: 1644 PPPYKSKEGLSY 1679
                  + G+SY
Sbjct: 700  LEERNMESGVSY 711


>gb|EXB24277.1| Ubiquitin carboxyl-terminal hydrolase 23 [Morus notabilis]
          Length = 931

 Score =  246 bits (628), Expect = 3e-62
 Identities = 169/516 (32%), Positives = 266/516 (51%), Gaps = 22/516 (4%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVDKVLS 350
            +GAGL NLGN+C+LN+ LQCLTYT PL  YL +  H   C   GFC  C +++HV + L 
Sbjct: 105  IGAGLENLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQNSCHVAGFCALCAIQKHVSRALQ 164

Query: 351  N------PREVVSPYNFF-HNVSGLSLSARFRKYYMEDAQEYMHCLLEAL-DTDLPSSKA 506
            +      P+++VS   +F H  +   +S  FR    EDA EYM  LLE++    LPS   
Sbjct: 165  STGRSLAPKDLVSNLRYFVHLTAQTGISRNFRNARQEDAHEYMVNLLESMHKCCLPS--- 221

Query: 507  AAPNDS-SLQEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALE 683
              P++S S  E+S V K+F G +++Q+ C  CS  S   +  +++SL I  ++S+ +AL 
Sbjct: 222  GVPSESPSAYEKSLVHKIFGGSLRSQVKCLQCSFCSNKFDPFLDLSLEIIKADSLHKALL 281

Query: 684  SFTAEEEIERGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRF--IDSENKLNRDVQ 854
            +FTA E ++ G+   +C++C Q    + ++T+ +AP VL IHLKRF   D   K+++ V 
Sbjct: 282  NFTAAELLDGGERQYQCQRCKQKVRARKQLTVHKAPYVLTIHLKRFRAHDPGQKIDKKVT 341

Query: 855  YSHILDLKSFYSGQQSPQDLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVT 1034
            +   LDL  F S   +  DL+Y LYGVLVH G + +SGHYY  ++TS G+W+SL+DS V 
Sbjct: 342  FGPTLDLGPFVSDSHA-GDLKYTLYGVLVHYGWSTHSGHYYCYVRTSSGMWYSLDDSRVV 400

Query: 1035 LISKESVLEEQAYVLCYFRRSSEWFSHYLEPTTNTSGVSSPKSVLEESNPSDDSDLSDKV 1214
             +S+++VLE++AY+L Y R  S   S              P +V ++ +    ++     
Sbjct: 401  QVSEKTVLEQKAYMLFYVRDRSNIAS------------KKPLNVFQKES-IKVNECGKNT 447

Query: 1215 SPDKMHKEKTPDDNQTKLSTPSTATS-SLRSKLISEMVESPL----GKADSSRKQPR--- 1370
            SP     ++   +  T++     A+S S+  K  S +V   +    GK D  + +P    
Sbjct: 448  SPYNQPLKRPVQNGSTEVKPNGVASSVSVAQKDASYVVPPRIPVSNGKLDQPKSEPSLTA 507

Query: 1371 --SFDSDTFVSNKKRATVDAFKSPSFPLKPKAEQAKESPKCSPTTPSSINKVLSTMTSSR 1544
              S DS        +     FK PS P   K +  K       T  +SIN +    +S++
Sbjct: 508  SLSKDSSENPPCPDKNPAQCFK-PSGPPSNKDDARKLETGTETTAAASINDLQEKGSSTK 566

Query: 1545 RACLLQHINQNNTSYQASKKSSTPNECKGRDSTPPP 1652
            + C     + N    Q S  +    +   ++ +  P
Sbjct: 567  KLCASVVTSPNLKEIQNSAPAENITDITSQEDSAEP 602


>ref|XP_002329560.1| predicted protein [Populus trichocarpa]
            gi|566161720|ref|XP_006385660.1| UBIQUITIN-SPECIFIC
            PROTEASE 21 family protein [Populus trichocarpa]
            gi|550342791|gb|ERP63457.1| UBIQUITIN-SPECIFIC PROTEASE
            21 family protein [Populus trichocarpa]
          Length = 809

 Score =  246 bits (628), Expect = 3e-62
 Identities = 136/358 (37%), Positives = 218/358 (60%), Gaps = 9/358 (2%)
 Frame = +3

Query: 171  VGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTTPCKSEGFCLFCVLKQHVDKVLS 350
            VGAGL N GN+CY+NA LQC T+T PLV  L +  H  PC++EGFC  CV++ H++  L+
Sbjct: 261  VGAGLFNKGNTCYINAVLQCFTHTVPLVQALRSCNHAMPCRTEGFCALCVIRDHIELSLA 320

Query: 351  NPREVVSPYNFFHNVSGLSLSARFRKYYMEDAQEYMHCLLEALDTDLPSSKAAAPNDSSL 530
            +  +++ P    +N+   S+S+ FR+Y  EDA E++ CLLE L+     S +   + SS 
Sbjct: 321  SSGKILEPLKLVNNLD--SISSFFRRYQQEDAHEFLQCLLERLERSCLDS-SLTDDISSS 377

Query: 531  QEQSFVKKMFEGQVKTQITCANCSHSSENLESTIEISLPIGLSNSITEALESFTAEEEIE 710
            Q+++ V+++F G++ +++ C NC H S+  E  I++SL I  ++++  ALESFT  E+IE
Sbjct: 378  QDKNIVERVFGGRLVSKLRCCNCGHFSDKYEPLIDLSLEIEDADTLQIALESFTNVEKIE 437

Query: 711  RGDGS-KCEKCDQGGILKMRVTIDRAPEVLLIHLKRF-ID--SENKLNRDVQYSHILDLK 878
              +    CE C +    + ++ +D+AP +  +HLKRF ID  S  K+ + V++   LDLK
Sbjct: 438  DSETKFTCENCKEEVSREKQLMLDKAPSIAALHLKRFKIDGTSVEKIGKHVEFPLELDLK 497

Query: 879  SFYSGQQSPQ-DLQYELYGVLVHSGSTLNSGHYYSVLQTSEGIWHSLNDSEVTLISKESV 1055
             + +   S     +Y+LY V+VH G +L SGHY   +++S   WH L+D EV+   +E V
Sbjct: 498  PYINDNDSNDVGFKYQLYAVVVHKGYSLTSGHYVCYIRSSPDTWHKLDDPEVSKEREEFV 557

Query: 1056 LEEQAYVLCYFRRSSEWFSHYLEP----TTNTSGVSSPKSVLEESNPSDDSDLSDKVS 1217
            L + AY+L Y R  + W S  ++P       ++  +SPKSVL+ +N S+   ++DK S
Sbjct: 558  LSQAAYILFYAREGTPWCSSLIKPQEFCLDRSNSNTSPKSVLDNAN-SECISVADKDS 614