BLASTX nr result
ID: Ephedra25_contig00017080
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00017080
(603 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001755196.1| predicted protein [Physcomitrella patens] gi... 148 1e-33
ref|XP_002993355.1| hypothetical protein SELMODRAFT_431456 [Sela... 145 1e-32
ref|XP_002972741.1| hypothetical protein SELMODRAFT_441953 [Sela... 144 2e-32
ref|XP_001776860.1| predicted protein [Physcomitrella patens] gi... 135 9e-30
ref|XP_001754008.1| predicted protein [Physcomitrella patens] gi... 132 9e-29
ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904... 122 1e-25
gb|EXC06808.1| Putative mediator of RNA polymerase II transcript... 119 8e-25
ref|XP_006375342.1| hypothetical protein POPTR_0014s080201g, par... 118 1e-24
ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263... 117 2e-24
ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citr... 117 2e-24
ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citr... 117 2e-24
ref|XP_002302587.2| CRYPTIC PRECOCIOUS family protein [Populus t... 117 3e-24
ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II tra... 116 4e-24
ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II tra... 116 5e-24
gb|EOX95959.1| Mediator of RNA polymerase II transcription subun... 115 9e-24
gb|EOX95958.1| Mediator of RNA polymerase II transcription subun... 115 9e-24
ref|XP_006339570.1| PREDICTED: mediator of RNA polymerase II tra... 115 1e-23
ref|XP_006827602.1| hypothetical protein AMTR_s00009p00238900 [A... 114 2e-23
gb|EMJ21769.1| hypothetical protein PRUPE_ppa000036mg [Prunus pe... 110 2e-22
ref|XP_006576321.1| PREDICTED: mediator of RNA polymerase II tra... 110 3e-22
>ref|XP_001755196.1| predicted protein [Physcomitrella patens]
gi|162693789|gb|EDQ80140.1| predicted protein
[Physcomitrella patens]
Length = 2111
Score = 148 bits (374), Expect = 1e-33
Identities = 78/198 (39%), Positives = 124/198 (62%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QLQE+ S++ALE+LLP+LLE VD I +SQ+H R V+ +QWLR L+P +VP++ DN+R
Sbjct: 256 QLQEKESVEALELLLPILLELVDGISMSQTHSRMLVELCLQWLRKLYPLGHVPSIGDNSR 315
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKGLSADL 239
++L+ ++V+PDT V+LDCFPLP CV + G S+ + +
Sbjct: 316 NNRVADTLVKLLQYLVLVIPDTFVALDCFPLPQCVSL-------------GGSESSAIES 362
Query: 238 NISKQESADSLVERKISD*DISIANTIFFIQKRASNLAKSVCPGILRNNQGKVVQSLDRA 59
+ + +S + S ++ + ++ IQKR ++LA +V P +LRNN+GK+VQ+LD+A
Sbjct: 363 SSNDLGRVNSGKRKTYS--EVGVVESVDLIQKRTASLASAVSPTLLRNNEGKIVQALDKA 420
Query: 58 LALGDVKTAYHCVFEEVF 5
L GD+ AY V+++ F
Sbjct: 421 LEKGDIAGAYRSVYDDEF 438
>ref|XP_002993355.1| hypothetical protein SELMODRAFT_431456 [Selaginella moellendorffii]
gi|300138786|gb|EFJ05540.1| hypothetical protein
SELMODRAFT_431456 [Selaginella moellendorffii]
Length = 2096
Score = 145 bits (365), Expect = 1e-32
Identities = 86/199 (43%), Positives = 120/199 (60%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
Q+QE+ SLD LE+LLPVLLEF+D++ LSQ HVR VD WLR L S +P+ ++ +
Sbjct: 323 QIQEKESLDGLELLLPVLLEFMDSLSLSQVHVRMLVDICQHWLRQLGVSNVLPSPEEQPQ 382
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKGLSADL 239
+ V+ F EILR ++ VPDT V+ DCFPL CV L ++ GD K AD
Sbjct: 383 QYRIVVTFVEILRYLLVAVPDTFVAFDCFPLLPCVTTLEG----MEIVKDGDPK---ADT 435
Query: 238 NISKQESADSLVERKISD*DISIANTIFFIQKRASNLAKSVCPGILRNNQGKVVQSLDRA 59
+ R ++ I + IQKRAS+L K+V PG+LRNN GKV+Q+LD++
Sbjct: 436 TKGNGRPGNLCPYR-----EVYIMEVVDSIQKRASSLTKAVNPGVLRNNDGKVIQALDKS 490
Query: 58 LALGDVKTAYHCVFEEVFT 2
LA GD+ +A+ VF+ F+
Sbjct: 491 LAAGDLLSAFQAVFDSDFS 509
>ref|XP_002972741.1| hypothetical protein SELMODRAFT_441953 [Selaginella moellendorffii]
gi|300159342|gb|EFJ25962.1| hypothetical protein
SELMODRAFT_441953 [Selaginella moellendorffii]
Length = 2096
Score = 144 bits (363), Expect = 2e-32
Identities = 85/199 (42%), Positives = 120/199 (60%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
Q+QE+ SLD LE+LLPVLLEF+D++ LSQ HVR VD WLR L S +P+ ++ +
Sbjct: 323 QIQEKESLDGLELLLPVLLEFMDSLSLSQVHVRMLVDICQHWLRQLGVSNVLPSPEEQPQ 382
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKGLSADL 239
+ V+ F EI+R ++ VPDT V+ DCFPL CV L ++ GD K AD
Sbjct: 383 QYRIVVTFVEIMRYLLVAVPDTFVAFDCFPLLPCVTTLEG----MEIVKDGDPK---ADT 435
Query: 238 NISKQESADSLVERKISD*DISIANTIFFIQKRASNLAKSVCPGILRNNQGKVVQSLDRA 59
+ R ++ I + IQKRAS+L K+V PG+LRNN GKV+Q+LD++
Sbjct: 436 TKGNGRPGNLCPYR-----EVYIMEVVDSIQKRASSLTKAVNPGVLRNNDGKVIQALDKS 490
Query: 58 LALGDVKTAYHCVFEEVFT 2
LA GD+ +A+ VF+ F+
Sbjct: 491 LAAGDLLSAFQAVFDSDFS 509
>ref|XP_001776860.1| predicted protein [Physcomitrella patens]
gi|162671716|gb|EDQ58263.1| predicted protein
[Physcomitrella patens]
Length = 2120
Score = 135 bits (340), Expect = 9e-30
Identities = 70/198 (35%), Positives = 124/198 (62%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QLQ++ SL+ALE+LLP++LE +D I SQ H R ++ +QWLR L+ S +VP+ D+++
Sbjct: 266 QLQDKESLEALELLLPIVLELIDGISSSQIHSRMLIELCLQWLRKLYSSGHVPSTGDSSQ 325
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKGLSADL 239
++L+ ++VVPDT V+LDCFPLP V + ++ S L
Sbjct: 326 NNQVADTLVKLLQYLLLVVPDTFVALDCFPLPQPVSLGGSNSS----AIESSSNDLGRVN 381
Query: 238 NISKQESADSLVERKISD*DISIANTIFFIQKRASNLAKSVCPGILRNNQGKVVQSLDRA 59
++ + +S + ++ ++ ++ + ++ I++R ++LA++V P +LRNN+G++VQ+LD+A
Sbjct: 382 SLDEDQSIFNAKGKRKTNFEVGVDESVDLIERRTASLARAVSPTLLRNNEGRIVQALDKA 441
Query: 58 LALGDVKTAYHCVFEEVF 5
L GD+ AY V++E F
Sbjct: 442 LEKGDIAGAYRSVYDEEF 459
>ref|XP_001754008.1| predicted protein [Physcomitrella patens]
gi|162694984|gb|EDQ81330.1| predicted protein
[Physcomitrella patens]
Length = 390
Score = 132 bits (331), Expect = 9e-29
Identities = 68/180 (37%), Positives = 113/180 (62%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QLQE+ S++ALE+LLP+LLE +D I +SQ+H R V+ +QWLR L+P +VP++ DN+R
Sbjct: 191 QLQEKESVEALELLLPILLELIDGISMSQTHSRMLVELCLQWLRKLYPLGHVPSIGDNSR 250
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKGLSADL 239
++L+ ++V+PDT V+LDCFPLP CV + ++ S L
Sbjct: 251 NNQVADTLVKLLQYLVLVIPDTFVALDCFPLPQCVSLGGSESS----AIESSSNDLGRVN 306
Query: 238 NISKQESADSLVERKISD*DISIANTIFFIQKRASNLAKSVCPGILRNNQGKVVQSLDRA 59
++ + S ++ + ++ + ++ I+KR ++LA +V P +LRNN+GK+VQ+LD+A
Sbjct: 307 SVVEDRSIMYAKGKRKTYSEVGVVESVDLIEKRNASLASAVSPTLLRNNEGKIVQALDKA 366
>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
putative [Ricinus communis]
Length = 2264
Score = 122 bits (305), Expect = 1e-25
Identities = 74/200 (37%), Positives = 111/200 (55%), Gaps = 5/200 (2%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QLQE+ L+ L++LLP++ +D+++LSQ++VRT + ++R PS L DN+R
Sbjct: 340 QLQEKDLLEILQLLLPIIYGVLDSVVLSQTYVRTLAGIAVHYIRE--PSPGGSDLVDNSR 397
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKGLSADL 239
AY E+LR I+ VPDT V++DCFPLP V ++ ++ S +
Sbjct: 398 RAYTTSALIEMLRYLILAVPDTFVAVDCFPLPPSVMSYAVNDGVFV-------SRASEEA 450
Query: 238 NISKQESADSLVERKISD*D-----ISIANTIFFIQKRASNLAKSVCPGILRNNQGKVVQ 74
+K SA + + D S + IQKR NLAK+ CPG L ++ K VQ
Sbjct: 451 RKTKDNSAGVVGVFRSKGLDAQYQSFSFNQVVLSIQKREDNLAKAACPGYLVHSAAKAVQ 510
Query: 73 SLDRALALGDVKTAYHCVFE 14
+LD+AL LGD+K AY+ +FE
Sbjct: 511 ALDKALILGDIKEAYNFLFE 530
>gb|EXC06808.1| Putative mediator of RNA polymerase II transcription subunit 12
[Morus notabilis]
Length = 2274
Score = 119 bits (297), Expect = 8e-25
Identities = 75/203 (36%), Positives = 120/203 (59%), Gaps = 6/203 (2%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QLQ++ SL+ +++LLP++ ++T++LSQ++VR+ V ++++R PS L DN+R
Sbjct: 339 QLQDKESLEIVQLLLPIIYGVLETVVLSQTYVRSLVGIAVRFIRE--PSPGGSDLVDNSR 396
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCM-LPPDNCLYPLIFYGDSKGLSAD 242
+AY E+LR I+ VPDT V+LDCFPLP+CV + D L SK D
Sbjct: 397 KAYTTSALVEMLRYLIVAVPDTFVALDCFPLPSCVVSHVVADGSL--------SKSSFED 448
Query: 241 LNISKQESADSLVERKISD*D-----ISIANTIFFIQKRASNLAKSVCPGILRNNQGKVV 77
+ K S++ V + D +++ + IQKRA +LAK+ PG ++ KVV
Sbjct: 449 VRKIKIGSSEISVPFRSKGLDAQYQSLALDYVVSSIQKRADSLAKAARPGYPGHSVAKVV 508
Query: 76 QSLDRALALGDVKTAYHCVFEEV 8
++LDR+ LGDV+ AY +FE++
Sbjct: 509 EALDRSRVLGDVRGAYTFLFEDL 531
>ref|XP_006375342.1| hypothetical protein POPTR_0014s080201g, partial [Populus
trichocarpa] gi|550323754|gb|ERP53139.1| hypothetical
protein POPTR_0014s080201g, partial [Populus
trichocarpa]
Length = 1107
Score = 118 bits (296), Expect = 1e-24
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 4/198 (2%)
Frame = -3
Query: 595 LQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNARE 416
LQE+ L+ L++LLP++ ++T++LSQS+VRT V ++++ PS L+DN+R
Sbjct: 305 LQEKDLLEILQLLLPIIYGVLETVVLSQSYVRTLVGIAVRFIHE--PSPGGSDLEDNSRR 362
Query: 415 AYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKGL---SA 245
AY E+LR I+ VPDT VSLDCFPLP V + + D++ SA
Sbjct: 363 AYTTSALIEMLRYLILAVPDTFVSLDCFPLPPIVVSYAVNEGAFVSKASEDARKTTDNSA 422
Query: 244 DL-NISKQESADSLVERKISD*DISIANTIFFIQKRASNLAKSVCPGILRNNQGKVVQSL 68
++ ++ + + D+ + +S + FIQKRA NLAK+ G ++ K VQ+L
Sbjct: 423 EVADVFRSKGLDAQYQ------SLSFDRVVSFIQKRADNLAKAASSGYPVHSVAKAVQAL 476
Query: 67 DRALALGDVKTAYHCVFE 14
D+AL+LGD++ AY +FE
Sbjct: 477 DKALSLGDIREAYSYLFE 494
>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
Length = 2272
Score = 117 bits (294), Expect = 2e-24
Identities = 70/199 (35%), Positives = 116/199 (58%), Gaps = 3/199 (1%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QLQ++ L+ L++LLP++ ++T++LSQ++VRT V +++++ PS L DN+R
Sbjct: 338 QLQDKELLEILQLLLPIIYGVIETVVLSQTYVRTLVGVAVRFIKE--PSPGGSDLVDNSR 395
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKGLSADL 239
AY E+LR I+ VPDT V+LDCFPLP CV ++ + D+ +
Sbjct: 396 RAYTSSALVEMLRFLILAVPDTFVALDCFPLPPCVVSHVANDGSFLTKVSEDTIKIK--- 452
Query: 238 NISKQESADSLVERKISD---*DISIANTIFFIQKRASNLAKSVCPGILRNNQGKVVQSL 68
++ +++ K+ D +S + + IQKRA NLAK+ PG +++ K VQ+L
Sbjct: 453 --NRPAEVPTVLRDKVLDGQYPSLSFDHIVSSIQKRADNLAKAASPGYPCHSEAKAVQAL 510
Query: 67 DRALALGDVKTAYHCVFEE 11
D+AL GDV+ AY +F++
Sbjct: 511 DKALVDGDVRGAYKFLFDD 529
>ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
gi|567905096|ref|XP_006445036.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|567905098|ref|XP_006445037.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|568876055|ref|XP_006491101.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X1 [Citrus sinensis] gi|568876057|ref|XP_006491102.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 12-like isoform X2 [Citrus sinensis]
gi|557547297|gb|ESR58275.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|557547298|gb|ESR58276.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|557547299|gb|ESR58277.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
Length = 2277
Score = 117 bits (293), Expect = 2e-24
Identities = 73/207 (35%), Positives = 115/207 (55%), Gaps = 10/207 (4%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QL+++ L+ L+++LP++ ++T++ SQ++VR+ V ++R PS L DN+R
Sbjct: 338 QLKDKELLEILQLVLPIIYGVLETVVSSQTYVRSLVGIATHFIRE--PSPGGSDLVDNSR 395
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKG----- 254
AY + +E+LR I+ VPDT V+LDCFPLP+CV + Y + G
Sbjct: 396 RAYTISALAEMLRYLILAVPDTFVALDCFPLPSCV------------VSYAANDGNFVSK 443
Query: 253 LSADLNISKQESADSLVERKISD*D-----ISIANTIFFIQKRASNLAKSVCPGILRNNQ 89
S D+ K S D++ + D +S N I IQ+RA NLAK PG ++
Sbjct: 444 ASEDVGKMKNYSTDAICVFRGKAVDAQYQSLSFDNVISAIQRRADNLAKDASPGYPGHSV 503
Query: 88 GKVVQSLDRALALGDVKTAYHCVFEEV 8
K VQ+LD+AL GD++ AY +FE++
Sbjct: 504 AKAVQALDKALLQGDIREAYKHLFEDL 530
>ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
gi|567905092|ref|XP_006445034.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|567905100|ref|XP_006445038.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|568876059|ref|XP_006491103.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X3 [Citrus sinensis] gi|557547295|gb|ESR58273.1|
hypothetical protein CICLE_v10018441mg [Citrus
clementina] gi|557547296|gb|ESR58274.1| hypothetical
protein CICLE_v10018441mg [Citrus clementina]
gi|557547300|gb|ESR58278.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
Length = 2239
Score = 117 bits (293), Expect = 2e-24
Identities = 73/207 (35%), Positives = 115/207 (55%), Gaps = 10/207 (4%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QL+++ L+ L+++LP++ ++T++ SQ++VR+ V ++R PS L DN+R
Sbjct: 300 QLKDKELLEILQLVLPIIYGVLETVVSSQTYVRSLVGIATHFIRE--PSPGGSDLVDNSR 357
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKG----- 254
AY + +E+LR I+ VPDT V+LDCFPLP+CV + Y + G
Sbjct: 358 RAYTISALAEMLRYLILAVPDTFVALDCFPLPSCV------------VSYAANDGNFVSK 405
Query: 253 LSADLNISKQESADSLVERKISD*D-----ISIANTIFFIQKRASNLAKSVCPGILRNNQ 89
S D+ K S D++ + D +S N I IQ+RA NLAK PG ++
Sbjct: 406 ASEDVGKMKNYSTDAICVFRGKAVDAQYQSLSFDNVISAIQRRADNLAKDASPGYPGHSV 465
Query: 88 GKVVQSLDRALALGDVKTAYHCVFEEV 8
K VQ+LD+AL GD++ AY +FE++
Sbjct: 466 AKAVQALDKALLQGDIREAYKHLFEDL 492
>ref|XP_002302587.2| CRYPTIC PRECOCIOUS family protein [Populus trichocarpa]
gi|550345126|gb|EEE81860.2| CRYPTIC PRECOCIOUS family
protein [Populus trichocarpa]
Length = 2219
Score = 117 bits (292), Expect = 3e-24
Identities = 78/200 (39%), Positives = 112/200 (56%), Gaps = 5/200 (2%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QLQE+ L+ L++LLP+L ++T+ILSQS VRT V ++++ PS L DN+R
Sbjct: 289 QLQEKDLLEILQLLLPILYGVLETVILSQSFVRTLVGVAVRFIHE--PSPGGSDLVDNSR 346
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKGLSADL 239
AY E+LR I+ VPDT V+LDCFPLP V ++ + SK S D
Sbjct: 347 RAYTTSALIEMLRYLILAVPDTFVALDCFPLPPSVVSYAVNDGTFL------SKA-SEDA 399
Query: 238 NISKQESADSLVERKISD*D-----ISIANTIFFIQKRASNLAKSVCPGILRNNQGKVVQ 74
+K SA+ + D +S + IQKRA NLAK+V G ++ K +Q
Sbjct: 400 RKTKDNSAEVACVFRSKGLDAQYQSLSFDRVVSSIQKRADNLAKAVSSGYPVHSVAKALQ 459
Query: 73 SLDRALALGDVKTAYHCVFE 14
+LD+AL+LGD++ AY +FE
Sbjct: 460 ALDKALSLGDIREAYGYLFE 479
>ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Fragaria vesca subsp. vesca]
Length = 2261
Score = 116 bits (291), Expect = 4e-24
Identities = 75/201 (37%), Positives = 112/201 (55%), Gaps = 5/201 (2%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QLQE+ L+ +++LLP++ ++T++LSQ++VR V ++++R PS L DN+R
Sbjct: 338 QLQEKELLEIVQLLLPIIYGVLETVVLSQTYVRNLVGTAVRFIRE--PSQGGSDLVDNSR 395
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKGLSADL 239
AY V E+LR ++ VPD+ V+LDCFPLP CV + G LS D+
Sbjct: 396 RAYTVSALVEMLRYLVLSVPDSFVALDCFPLPPCVVSYVANE--------GSLPKLSDDV 447
Query: 238 NISKQESAD--SLVERKISD---*DISIANTIFFIQKRASNLAKSVCPGILRNNQGKVVQ 74
K SA+ S+ K D ++ + + IQKRA NL KS P ++ K VQ
Sbjct: 448 RKIKIGSAEVASVFRSKAFDAQFQSLAFDHVVSSIQKRADNLEKSTSPSYPNHSIAKAVQ 507
Query: 73 SLDRALALGDVKTAYHCVFEE 11
+LDR+L GDV AY +FE+
Sbjct: 508 ALDRSLVQGDVLGAYRFLFED 528
>ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Solanum lycopersicum]
Length = 2262
Score = 116 bits (290), Expect = 5e-24
Identities = 77/200 (38%), Positives = 113/200 (56%), Gaps = 3/200 (1%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QLQE+ L L++LLPV+ F+DT++LSQS VRT V +++++ PS L DN+R
Sbjct: 336 QLQEKELLGVLQLLLPVVYGFIDTVVLSQSCVRTLVGIALRFIQE--PSPGGSDLVDNSR 393
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCM-LPPDNCLYPLIFYGDSKGLSAD 242
AY + E+LR ++ VPDT V+LDCFP+P CV + D LY + K +
Sbjct: 394 RAYTMAALVEMLRYLMLAVPDTFVALDCFPMPPCVMTNVVTDGSLYSKVTEDTRKVKNGP 453
Query: 241 LNISKQESADSLVER--KISD*DISIANTIFFIQKRASNLAKSVCPGILRNNQGKVVQSL 68
E A L ++ +I SI+ + IQKRA +LA + PG + K + +L
Sbjct: 454 F-----EVAYFLRDKGPEIRSDSYSISRAVSSIQKRAQHLATAARPGHPGQSVVKALHAL 508
Query: 67 DRALALGDVKTAYHCVFEEV 8
D+ALA GD++ AY +FE V
Sbjct: 509 DKALAHGDLREAYKFLFENV 528
>gb|EOX95959.1| Mediator of RNA polymerase II transcription subunit 12 isoform 3
[Theobroma cacao]
Length = 2257
Score = 115 bits (288), Expect = 9e-24
Identities = 78/201 (38%), Positives = 106/201 (52%), Gaps = 4/201 (1%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QLQE+ + L++LLP++ ++TIIL Q++VR V I+++R PS L DN+R
Sbjct: 338 QLQEKELFEILQLLLPIIFGVLETIILCQTYVRNLVGIAIRFIRE--PSPGGSDLVDNSR 395
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKGLSADL 239
AY + E+LR I VPDT V+LDCFPLP CV + L G S D
Sbjct: 396 RAYTISALVEMLRYLIQAVPDTFVALDCFPLPTCVVS-------HALNDGGFLSKSSDDA 448
Query: 238 NISKQESADSLVER----KISD*DISIANTIFFIQKRASNLAKSVCPGILRNNQGKVVQS 71
K SAD+ V R +S + + IQKRA NLAK G + K VQ+
Sbjct: 449 GKIKHNSADAYVLRGKGFDSQYQSLSFDHVVSTIQKRADNLAKGTSAGYPSQSVAKAVQT 508
Query: 70 LDRALALGDVKTAYHCVFEEV 8
LD+AL GD+ AY +FE +
Sbjct: 509 LDKALLQGDLMEAYKHIFENL 529
>gb|EOX95958.1| Mediator of RNA polymerase II transcription subunit 12 isoform 2
[Theobroma cacao]
Length = 2237
Score = 115 bits (288), Expect = 9e-24
Identities = 78/201 (38%), Positives = 106/201 (52%), Gaps = 4/201 (1%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QLQE+ + L++LLP++ ++TIIL Q++VR V I+++R PS L DN+R
Sbjct: 338 QLQEKELFEILQLLLPIIFGVLETIILCQTYVRNLVGIAIRFIRE--PSPGGSDLVDNSR 395
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKGLSADL 239
AY + E+LR I VPDT V+LDCFPLP CV + L G S D
Sbjct: 396 RAYTISALVEMLRYLIQAVPDTFVALDCFPLPTCVVS-------HALNDGGFLSKSSDDA 448
Query: 238 NISKQESADSLVER----KISD*DISIANTIFFIQKRASNLAKSVCPGILRNNQGKVVQS 71
K SAD+ V R +S + + IQKRA NLAK G + K VQ+
Sbjct: 449 GKIKHNSADAYVLRGKGFDSQYQSLSFDHVVSTIQKRADNLAKGTSAGYPSQSVAKAVQT 508
Query: 70 LDRALALGDVKTAYHCVFEEV 8
LD+AL GD+ AY +FE +
Sbjct: 509 LDKALLQGDLMEAYKHIFENL 529
>ref|XP_006339570.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Solanum tuberosum]
gi|565344967|ref|XP_006339571.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X2 [Solanum tuberosum]
Length = 2262
Score = 115 bits (287), Expect = 1e-23
Identities = 76/200 (38%), Positives = 112/200 (56%), Gaps = 3/200 (1%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QLQE+ L L++LLPV+ F+DT++LSQS V T V I++++ PS L DN+R
Sbjct: 336 QLQEKELLGVLQLLLPVIYGFIDTVVLSQSCVHTLVGIAIRFIQE--PSPGGSDLVDNSR 393
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCM-LPPDNCLYPLIFYGDSKGLSAD 242
AY + E+LR ++ VPDT V+LDCFP+P CV + D LY + K +
Sbjct: 394 RAYTMAALVEMLRYLMLAVPDTFVALDCFPMPPCVMTNVVTDGSLYSKVTEDTRKVKNGP 453
Query: 241 LNISKQESADSLVER--KISD*DISIANTIFFIQKRASNLAKSVCPGILRNNQGKVVQSL 68
E A L ++ ++ SI+ + IQKRA +LA + PG + K + +L
Sbjct: 454 F-----EVAYFLRDKGPEVRSDSYSISRAVSSIQKRAQHLATAARPGHPGQSVVKALHAL 508
Query: 67 DRALALGDVKTAYHCVFEEV 8
D+ALA GD++ AY +FE V
Sbjct: 509 DKALAHGDLREAYKFLFENV 528
>ref|XP_006827602.1| hypothetical protein AMTR_s00009p00238900 [Amborella trichopoda]
gi|548832222|gb|ERM95018.1| hypothetical protein
AMTR_s00009p00238900 [Amborella trichopoda]
Length = 2276
Score = 114 bits (286), Expect = 2e-23
Identities = 76/208 (36%), Positives = 119/208 (57%), Gaps = 11/208 (5%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QLQE SL+ L++LLP++ +++I L QS+VR VD ++ L L + P DN+
Sbjct: 335 QLQENESLEVLKLLLPIVYNLIESIALCQSYVRMLVDISLRSLEELATWVSNPV--DNSL 392
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKGLSADL 239
+Y +E+L+ I+ VPDT V+LD FPLP+CV + DSK SA +
Sbjct: 393 RSYVASSLAELLQYLILNVPDTFVALDSFPLPSCV--------------FPDSKNASALV 438
Query: 238 NIS------KQESADSLVE-----RKISD*DISIANTIFFIQKRASNLAKSVCPGILRNN 92
IS + SA++ + R +S ++ + + IQ RA++L K+V PG+ +
Sbjct: 439 TISPDVRKGQSGSAENFNKGTKKGRFVSGRQVAFRHVVSAIQIRAAHLTKAVSPGLQGHL 498
Query: 91 QGKVVQSLDRALALGDVKTAYHCVFEEV 8
+ K+VQSLD+ L LGDV+ A++ VFE+V
Sbjct: 499 EAKLVQSLDKTLILGDVRGAHNSVFEDV 526
>gb|EMJ21769.1| hypothetical protein PRUPE_ppa000036mg [Prunus persica]
Length = 2210
Score = 110 bits (276), Expect = 2e-22
Identities = 71/202 (35%), Positives = 115/202 (56%), Gaps = 6/202 (2%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QLQE+ L+ +++LLP++ ++T++LSQ++VR V ++++R PS + N+R
Sbjct: 339 QLQEKELLEIMQLLLPIVYGVLETVVLSQTYVRNLVGVAVRFIRE--PSQGGSDVVGNSR 396
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPL------IFYGDSK 257
AY V E+LR I+ VPDT V+LDCFPLP+CV ++ L + I G ++
Sbjct: 397 RAYTVSTVVEMLRYLILAVPDTFVALDCFPLPSCVVSYIVNDGLPKMSEDVRKIGNGPAE 456
Query: 256 GLSADLNISKQESADSLVERKISD*DISIANTIFFIQKRASNLAKSVCPGILRNNQGKVV 77
SA + + D+ + ++ + + IQKRA NLAK+ P ++ K V
Sbjct: 457 VASA----FRSKGFDAQYQ------SLAFDHVVSSIQKRADNLAKAASPSYPFHSIAKAV 506
Query: 76 QSLDRALALGDVKTAYHCVFEE 11
Q+LDR+L GDV+ AY +FE+
Sbjct: 507 QALDRSLVQGDVRGAYRFLFED 528
>ref|XP_006576321.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Glycine max]
gi|571443813|ref|XP_006576322.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X2 [Glycine max]
Length = 2227
Score = 110 bits (275), Expect = 3e-22
Identities = 70/197 (35%), Positives = 104/197 (52%)
Frame = -3
Query: 598 QLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAR 419
QLQE+ L+ ++LLP++ F++TI+LSQS+VRT ++ +R P+ L DN+R
Sbjct: 339 QLQEKELLEVWQLLLPIIYGFLETIVLSQSYVRTLAGLALRVIR--DPAPGGSDLVDNSR 396
Query: 418 EAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLIFYGDSKGLSADL 239
AY E+LR I+VVPDT +LDCFPLP+ V +S +
Sbjct: 397 RAYTAYAVVEMLRYLILVVPDTFAALDCFPLPSSV--------------------ISHTM 436
Query: 238 NISKQESADSLVERKISD*DISIANTIFFIQKRASNLAKSVCPGILRNNQGKVVQSLDRA 59
N + KI + + I IQK +LAKS PG + KV ++LD++
Sbjct: 437 NDGSFVLKSTEAAGKIKNSSDDFGHIISCIQKHTEDLAKSASPGYPGHCLAKVAKALDKS 496
Query: 58 LALGDVKTAYHCVFEEV 8
L LGD++ AY +FEE+
Sbjct: 497 LVLGDLRVAYKFLFEEL 513