BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00016920
         (950 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517974.1| conserved hypothetical protein [Ricinus comm...   169   1e-39
gb|EOX99339.1| Nuclear assembly factor 1, putative isoform 1 [Th...   165   3e-38
ref|XP_004304117.1| PREDICTED: uncharacterized protein LOC101310...   165   3e-38
ref|XP_006447313.1| hypothetical protein CICLE_v10014470mg [Citr...   161   4e-37
gb|EMJ18227.1| hypothetical protein PRUPE_ppa001913mg [Prunus pe...   161   4e-37
ref|XP_006592413.1| PREDICTED: H/ACA ribonucleoprotein complex n...   160   7e-37
gb|EXB75212.1| H/ACA ribonucleoprotein complex non-core subunit ...   155   2e-35
ref|XP_004148107.1| PREDICTED: uncharacterized protein LOC101203...   155   2e-35
ref|XP_002892167.1| hypothetical protein ARALYDRAFT_311450 [Arab...   155   2e-35
emb|CAN75706.1| hypothetical protein VITISV_031419 [Vitis vinifera]   155   2e-35
gb|ESW04635.1| hypothetical protein PHAVU_011G112400g [Phaseolus...   155   3e-35
ref|XP_006357520.1| PREDICTED: H/ACA ribonucleoprotein complex n...   154   4e-35
ref|XP_006357519.1| PREDICTED: H/ACA ribonucleoprotein complex n...   154   4e-35
ref|XP_006357518.1| PREDICTED: H/ACA ribonucleoprotein complex n...   154   4e-35
ref|XP_006357517.1| PREDICTED: H/ACA ribonucleoprotein complex n...   154   4e-35
ref|XP_002319375.2| hypothetical protein POPTR_0013s14160g [Popu...   154   5e-35
ref|XP_002329402.1| predicted protein [Populus trichocarpa] gi|5...   154   6e-35
emb|CBI28917.3| unnamed protein product [Vitis vinifera]              152   2e-34
ref|XP_006418226.1| hypothetical protein EUTSA_v10006867mg [Eutr...   150   7e-34
ref|NP_171852.2| nuclear assembly factor 1 [Arabidopsis thaliana...   150   9e-34

>ref|XP_002517974.1| conserved hypothetical protein [Ricinus communis]
           gi|223542956|gb|EEF44492.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 786

 Score =  169 bits (429), Expect = 1e-39
 Identities = 97/231 (41%), Positives = 137/231 (59%), Gaps = 20/231 (8%)
 Frame = -2

Query: 943 EGGKNGIQLDEKLGGDTDLEEGEIR----------TAEDSEPKGGGKKVYDDVLDSDEEE 794
           E  + G+QL  ++  + ++EEGEIR          + ED E        + DV   D EE
Sbjct: 307 EEEEEGMQLKREVE-EGEIEEGEIREINGEGMVHKSDEDEEEDEKNMVEWSDVEFDDIEE 365

Query: 793 Q----------VRXXXXXXXXXXXXXXXESLQPHHITIPAXXXXXXXXXXXXVEGIECPR 644
           +          +R                +LQPHH  +P             VEG+E   
Sbjct: 366 EEEGTGLMKGPIRSQNELKFLPPVPPVDVTLQPHHQVLPVGVVLSIINAQVIVEGVEKHN 425

Query: 643 ALNEGTILWVTEKRSPLGFIDEVFGPVKNPFYLVRFNTDADVPAYVEEGVRISYVSEFAK 464
            LNEG+ILW+TEKRSPLG +DE+FGPV+NP+Y+VR+N++++VP+ + +G RIS+V+EFA 
Sbjct: 426 PLNEGSILWITEKRSPLGLVDEIFGPVQNPYYVVRYNSESEVPSGISQGTRISFVAEFAN 485

Query: 463 FLLDDDPSLYEKGYDIYGDCEEELSDEAVFSDDEKEAEFYRSKGMTKRGPN 311
            +L ++ +LY+KGYD  G+ +EELSDEA FSDDEKEAE+ R K M+KRG N
Sbjct: 486 HVL-NEKNLYKKGYDASGENDEELSDEAEFSDDEKEAEYMRMKKMSKRGIN 535


>gb|EOX99339.1| Nuclear assembly factor 1, putative isoform 1 [Theobroma cacao]
           gi|508707444|gb|EOX99340.1| Nuclear assembly factor 1,
           putative isoform 1 [Theobroma cacao]
          Length = 678

 Score =  165 bits (417), Expect = 3e-38
 Identities = 105/276 (38%), Positives = 146/276 (52%), Gaps = 5/276 (1%)
 Frame = -2

Query: 943 EGGKNGIQLDEKLGGDTDLEEGEIRTAEDSEPKGGGKKVYDDVLDSDEEE-----QVRXX 779
           EG   GI  +  +GG  +L++ E    E  E   G    +D+V D D +       +R  
Sbjct: 202 EGEIGGIDREMAVGGTDNLDDDEEEEEETEEILSGFGIEFDEVDDEDADAGAMRGPIRSK 261

Query: 778 XXXXXXXXXXXXXESLQPHHITIPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTEKRS 599
                         +LQPHH  +P             VEG E    LNEG+ILW+T  RS
Sbjct: 262 NELEVLPPVPPLEVTLQPHHKMLPVGVVLSIIGTKVIVEGREQHNPLNEGSILWITINRS 321

Query: 598 PLGFIDEVFGPVKNPFYLVRFNTDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEKGYD 419
           PLG +DE+FGPV NPFY+VR+N +++VPA + EG  IS+V EFA  +L +D +L++KGYD
Sbjct: 322 PLGLVDEIFGPVINPFYVVRYNLESEVPAGIHEGTLISFVPEFANHVL-NDKNLHKKGYD 380

Query: 418 IYGDCEEELSDEAVFSDDEKEAEFYRSKGMTKRGPNTPDKSPHKPFERQGKHEVVDKRKK 239
             G+ +EELSD+  FSDDE+EAE+ R + MTKRG N           R G  +   K+ K
Sbjct: 381 ASGENDEELSDDTEFSDDEREAEYKRMQKMTKRGMND---------RRVGNRKCNKKKVK 431

Query: 238 NFDGRKGNYQRNNVNRTDEQSQQGSFPMQQTFKGFN 131
           + DG   N  RN+  +T   +  G  P  Q+   F+
Sbjct: 432 SRDGAWKN-GRNSAQQT--PTLVGQLPPNQSQHKFS 464


>ref|XP_004304117.1| PREDICTED: uncharacterized protein LOC101310915 [Fragaria vesca
           subsp. vesca]
          Length = 711

 Score =  165 bits (417), Expect = 3e-38
 Identities = 93/227 (40%), Positives = 130/227 (57%), Gaps = 15/227 (6%)
 Frame = -2

Query: 892 DLEEGEIRTAEDSEPKGG------GKKVY---DDVLDSDEEEQ------VRXXXXXXXXX 758
           +LEEGEI   E+     G      G +V    DD+ D  +EE+      +R         
Sbjct: 210 ELEEGEISGGEEKGYGSGDDGDEEGAEVAWSDDDIFDEGDEEEDAIKGPIRSKNELEELP 269

Query: 757 XXXXXXESLQPHHITIPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTEKRSPLGFIDE 578
                  +L+PHH  +P             VEG+E    LNEG+ILW+TE RSPLG +DE
Sbjct: 270 PVPPVNATLEPHHQMLPVGVVLSVVGTKVIVEGVEKHNPLNEGSILWITESRSPLGLVDE 329

Query: 577 VFGPVKNPFYLVRFNTDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEKGYDIYGDCEE 398
           +FGPV NP+Y+VR+NT++++PA ++ G  IS+V EFA  +L ++  LY KGYD  G  +E
Sbjct: 330 IFGPVINPYYMVRYNTESEIPAGIQVGTPISFVQEFADHVL-NNKDLYRKGYDASGANDE 388

Query: 397 ELSDEAVFSDDEKEAEFYRSKGMTKRGPNTPDKSPHKPFERQGKHEV 257
           E+SDEA FSDDEKEAE+ R + M KRG N  +    K   ++GK+ +
Sbjct: 389 EISDEAEFSDDEKEAEYRRQQKMAKRGMNDQNAGSKKNNRKKGKNRM 435


>ref|XP_006447313.1| hypothetical protein CICLE_v10014470mg [Citrus clementina]
           gi|568877181|ref|XP_006491626.1| PREDICTED: H/ACA
           ribonucleoprotein complex non-core subunit NAF1-like
           [Citrus sinensis] gi|557549924|gb|ESR60553.1|
           hypothetical protein CICLE_v10014470mg [Citrus
           clementina]
          Length = 695

 Score =  161 bits (407), Expect = 4e-37
 Identities = 102/247 (41%), Positives = 129/247 (52%), Gaps = 20/247 (8%)
 Frame = -2

Query: 907 LGGDTDLEEGEIRTAEDSEPKGGGKKVYDD---------VLDSD-----------EEEQV 788
           LG   +LEEGEI   +  E  GG     DD         V+D D            E  +
Sbjct: 219 LGELGELEEGEIEDVDREEMTGGIDDDEDDEEDEVEMISVVDVDIDGGDEIDGCAREGPI 278

Query: 787 RXXXXXXXXXXXXXXXESLQPHHITIPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTE 608
           R                 LQPHH  +P             VEG E    LNEG+ILW+TE
Sbjct: 279 RSKNELQVLPLVPQVNVVLQPHHQMLPVGVVLSVRGVQVIVEGAEKHNPLNEGSILWITE 338

Query: 607 KRSPLGFIDEVFGPVKNPFYLVRFNTDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEK 428
            R PLG IDE+FGPVKNP+Y+VR+N++ ++PA +  G  IS+V +FA  +L DD +LY+K
Sbjct: 339 SRVPLGLIDEIFGPVKNPYYVVRYNSENEIPAEIRVGTSISFVQDFANHVL-DDKNLYKK 397

Query: 427 GYDIYGDCEEELSDEAVFSDDEKEAEFYRSKGMTKRGPNTPDKSPHKPFERQGKHEVVDK 248
           GYD  G+ +EELSDEA FSDDEKEAE+ R + M KRG         KP  R+       K
Sbjct: 398 GYDASGENDEELSDEAEFSDDEKEAEYKRRQKMEKRG-----MDDQKPGNRKNNR----K 448

Query: 247 RKKNFDG 227
           + KN DG
Sbjct: 449 KVKNKDG 455


>gb|EMJ18227.1| hypothetical protein PRUPE_ppa001913mg [Prunus persica]
          Length = 742

 Score =  161 bits (407), Expect = 4e-37
 Identities = 99/257 (38%), Positives = 143/257 (55%), Gaps = 28/257 (10%)
 Frame = -2

Query: 946 SEGGKNGIQLDEKLGGDTDLEEGEIRTAEDSEPKGGGKKVY-----------DDVL---- 812
           +E GK  ++++E      ++EEGEIR A+  E   G K  Y           D+V+    
Sbjct: 215 NEKGKMKVEVEE-CDEAGEIEEGEIRDADGGEK--GDKTHYIDYESADDDDDDEVVAWTD 271

Query: 811 -----DSDEEEQ--------VRXXXXXXXXXXXXXXXESLQPHHITIPAXXXXXXXXXXX 671
                D DEEE         +R                +L+PHH  +P            
Sbjct: 272 AEIFDDGDEEEDDGGALKGPIRSKNELEVLPPIPPVNVTLEPHHQMMPVGVVLSILGTQA 331

Query: 670 XVEGIECPRALNEGTILWVTEKRSPLGFIDEVFGPVKNPFYLVRFNTDADVPAYVEEGVR 491
            VEG+E    LNEG+ILW+TE RSPLG IDE+FGPV +P+Y+VR+N+++++PA ++ G  
Sbjct: 332 IVEGVEKHNPLNEGSILWITESRSPLGLIDEIFGPVIHPYYVVRYNSESEIPAGIQAGTL 391

Query: 490 ISYVSEFAKFLLDDDPSLYEKGYDIYGDCEEELSDEAVFSDDEKEAEFYRSKGMTKRGPN 311
           +S+V EFA  +L +D  +Y+KGYD  G  +EE+SDEA FSDDEKEAE+ R + MTKRG N
Sbjct: 392 VSFVPEFADHVL-NDKDVYKKGYDASGKNDEEVSDEAEFSDDEKEAEYRRMQKMTKRGMN 450

Query: 310 TPDKSPHKPFERQGKHE 260
             +    K   ++GK++
Sbjct: 451 DQNLGNMKNNRKKGKNK 467


>ref|XP_006592413.1| PREDICTED: H/ACA ribonucleoprotein complex non-core subunit
           NAF1-like [Glycine max]
          Length = 570

 Score =  160 bits (405), Expect = 7e-37
 Identities = 90/217 (41%), Positives = 123/217 (56%), Gaps = 7/217 (3%)
 Frame = -2

Query: 916 DEKLGGDTDLEEGEIRTAEDSEPKGGGKKVYDDVLDSDEEEQ-------VRXXXXXXXXX 758
           D+    D ++EEGEI  +++       K V   + D D++E        +R         
Sbjct: 148 DDDKDDDVEVEEGEISGSDEE------KMVSWSMADEDDDEDGDVGGGPIRSKNELQNLP 201

Query: 757 XXXXXXESLQPHHITIPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTEKRSPLGFIDE 578
                  +L+PHH T+P             VEG+E    LNEG+ILW+TE R PLG IDE
Sbjct: 202 PVPPVDVTLEPHHQTLPVGIVTSILGAQVIVEGVEKHGPLNEGSILWLTESRKPLGLIDE 261

Query: 577 VFGPVKNPFYLVRFNTDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEKGYDIYGDCEE 398
           +FGPVKNP+Y+VR+N++++VP  + EG  IS+V EFA  +L ++  LY KGYD  G  +E
Sbjct: 262 IFGPVKNPYYVVRYNSESEVPTGIHEGTLISFVPEFADHVL-NNKDLYRKGYDASGADDE 320

Query: 397 ELSDEAVFSDDEKEAEFYRSKGMTKRGPNTPDKSPHK 287
           ELSDE  FSDDEKEAE+ R +  TKRG N  +    K
Sbjct: 321 ELSDEMEFSDDEKEAEYKRMQKQTKRGANDQNHGKKK 357


>gb|EXB75212.1| H/ACA ribonucleoprotein complex non-core subunit NAF1 [Morus
            notabilis]
          Length = 669

 Score =  155 bits (393), Expect = 2e-35
 Identities = 96/288 (33%), Positives = 149/288 (51%), Gaps = 20/288 (6%)
 Frame = -2

Query: 925  IQLDEKLGGDTDLEEGEIR----------TAEDSEPKGGGKKV--YDDVLDSDEEEQ--- 791
            + +  KL    ++EEGEIR          T +D +  G  + +  + D+  +D+EE    
Sbjct: 182  VDVRRKLNETGEVEEGEIRDVNPRDVASLTNDDDDDNGDVEAMVGWSDIDVADDEEDGGG 241

Query: 790  -----VRXXXXXXXXXXXXXXXESLQPHHITIPAXXXXXXXXXXXXVEGIECPRALNEGT 626
                 +                 +L PHH  +P             VEG+E    LN+G+
Sbjct: 242  AMNGPITSKNEFKHLPPVPSVEATLLPHHQMLPVGVVLSVIGTQVIVEGVEKHNPLNDGS 301

Query: 625  ILWVTEKRSPLGFIDEVFGPVKNPFYLVRFNTDADVPAYVEEGVRISYVSEFAKFLLDDD 446
            ILW+TE +SPLG +DE+FGPVK+P+Y+VR+N++++VP+ +  G  IS+V EFA  +L+++
Sbjct: 302  ILWITEGKSPLGLVDEIFGPVKHPYYIVRYNSESEVPSGIHTGTSISFVPEFASHVLNNN 361

Query: 445  PSLYEKGYDIYGDCEEELSDEAVFSDDEKEAEFYRSKGMTKRGPNTPDKSPHKPFERQGK 266
             ++Y+KGYD  G+ +EELS E  FSDDEKEAE+ R + MTKRG N P    +K       
Sbjct: 362  -NVYKKGYDASGENDEELSYEEEFSDDEKEAEYKRMQKMTKRGGNNPKPRNNK------- 413

Query: 265  HEVVDKRKKNFDGRKGNYQRNNVNRTDEQSQQGSFPMQQTFKGFNQPP 122
                   KKN   R   +++   +  +  +  G  P  Q  + F+  P
Sbjct: 414  -----NNKKNVKNRVEPWKKGKQSPQETPTDLGPAPPNQHQRHFSPLP 456


>ref|XP_004148107.1| PREDICTED: uncharacterized protein LOC101203341 [Cucumis sativus]
          Length = 727

 Score =  155 bits (393), Expect = 2e-35
 Identities = 97/256 (37%), Positives = 135/256 (52%), Gaps = 19/256 (7%)
 Frame = -2

Query: 892 DLEEGEIRTAEDSEPK------------GGGKKVYDDVLDSDEEEQ------VRXXXXXX 767
           +LEEGEIR A+D + +            G   K  D+ LD +EEE       +       
Sbjct: 240 ELEEGEIRDADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEAGAEGGPITSKNELK 299

Query: 766 XXXXXXXXXESLQPHHITIPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTEKRSPLGF 587
                     +LQPHH  +P             VEG+E    L+EG+ILW+TE RSPLG 
Sbjct: 300 VLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGL 359

Query: 586 IDEVFGPVKNPFYLVRFNTDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEKGYDIYGD 407
           +DE+FGPVKNP+Y VR+N++++VP  +  G  +S+V EFA ++L ++  LY+KGYD  G 
Sbjct: 360 VDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVL-NNKDLYKKGYDASGV 418

Query: 406 CEEELSDEAVFSDDEKEAEFYRSKGMTKRGPNTPDKSPHKPFERQGKHEVVDKRKKNFDG 227
            +EE+SD+  FSDDEKE EF + + + KR  N  D       +  G+     K+K N   
Sbjct: 419 NDEEVSDDGEFSDDEKELEFKKMQRLAKRAMN--DNQQINANKNNGR-----KKKNNAKA 471

Query: 226 RK-GNYQRNNVNRTDE 182
           RK G     N N  DE
Sbjct: 472 RKFGERTFENANVPDE 487


>ref|XP_002892167.1| hypothetical protein ARALYDRAFT_311450 [Arabidopsis lyrata subsp.
           lyrata] gi|297338009|gb|EFH68426.1| hypothetical protein
           ARALYDRAFT_311450 [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  155 bits (393), Expect = 2e-35
 Identities = 91/232 (39%), Positives = 131/232 (56%), Gaps = 2/232 (0%)
 Frame = -2

Query: 919 LDEKLGGDTDLEEGEIRTAEDSEPKG--GGKKVYDDVLDSDEEEQVRXXXXXXXXXXXXX 746
           LDE+  GD ++E+ E   A+D + +         DD L    +E +R             
Sbjct: 303 LDEE-DGDDEIEDDEDDDADDDDDEAMVAWSNDEDDDLGLQTKEPIRSKNELKELPPVPA 361

Query: 745 XXESLQPHHITIPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTEKRSPLGFIDEVFGP 566
              +L+PHH T+P             VEG+E    L EG+ILW+TEKR+PLG +DE+FGP
Sbjct: 362 VDVTLEPHHATLPVGVVLSVMSTQVIVEGMEKHSPLTEGSILWITEKRTPLGLVDEIFGP 421

Query: 565 VKNPFYLVRFNTDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEKGYDIYGDCEEELSD 386
           VK PFY+VRFN++++VP  V +G  +S+V++FA+ +L +   L +KGYD  GD +EE+ D
Sbjct: 422 VKCPFYIVRFNSESEVPEGVSQGTPVSFVADFAQHIL-NIKELQKKGYDASGDNDEEIPD 480

Query: 385 EAVFSDDEKEAEFYRSKGMTKRGPNTPDKSPHKPFERQGKHEVVDKRKKNFD 230
           E  FSDDEKEAE+ R + M KRG     K+ +            +K+KKN D
Sbjct: 481 ELEFSDDEKEAEYRRMQKMEKRGMMNDQKTGN----------TRNKKKKNRD 522


>emb|CAN75706.1| hypothetical protein VITISV_031419 [Vitis vinifera]
          Length = 641

 Score =  155 bits (392), Expect = 2e-35
 Identities = 95/238 (39%), Positives = 131/238 (55%)
 Frame = -2

Query: 916 DEKLGGDTDLEEGEIRTAEDSEPKGGGKKVYDDVLDSDEEEQVRXXXXXXXXXXXXXXXE 737
           D+ L  D D +E E    E+    G      DD   + +   ++                
Sbjct: 174 DDDLEEDDDDDEEEEEEEEEEMIAGSDYDGEDDSCGNVKGGAIKSKNEIEALPPVPPLDV 233

Query: 736 SLQPHHITIPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTEKRSPLGFIDEVFGPVKN 557
           +LQPHH T+P             VEG E  + L EG+ILW+TE RSPLG IDE+FGPVKN
Sbjct: 234 TLQPHHQTLPVGVVSSIIGAKVIVEGAEKHKPLTEGSILWITESRSPLGLIDEIFGPVKN 293

Query: 556 PFYLVRFNTDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEKGYDIYGDCEEELSDEAV 377
           P+Y+VR+N+D++VPA + EG  IS+V +FA  +L ++ +LY+KGYD  G+ +EE+SD   
Sbjct: 294 PYYVVRYNSDSEVPAGINEGTFISFVPQFANHIL-NERNLYKKGYDASGENDEEVSD-VE 351

Query: 376 FSDDEKEAEFYRSKGMTKRGPNTPDKSPHKPFERQGKHEVVDKRKKNFDGRKGNYQRN 203
           FSDDE+EAE  R+  M KRG N       KP  ++ K     K+ KN DG   N Q +
Sbjct: 352 FSDDEEEAEHKRTLKMIKRGTN-----DQKPGNKKNKR----KKVKNRDGAWKNGQHS 400


>gb|ESW04635.1| hypothetical protein PHAVU_011G112400g [Phaseolus vulgaris]
          Length = 543

 Score =  155 bits (391), Expect = 3e-35
 Identities = 89/210 (42%), Positives = 120/210 (57%), Gaps = 6/210 (2%)
 Frame = -2

Query: 898 DTDLEEGEIRTAEDSEPKGGGKKVYDDVLDSDEEE------QVRXXXXXXXXXXXXXXXE 737
           + ++EEGEI +++  E K     + D   D DEE+       +R                
Sbjct: 135 EVEVEEGEISSSD--EEKMASWSMVDADGDHDEEDGDAGVGPIRSKNELQNLPAVPPVNA 192

Query: 736 SLQPHHITIPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTEKRSPLGFIDEVFGPVKN 557
           +L+PHH  +P             VEG+E    LNEG+ILW+TE R PLG IDE+FGPVKN
Sbjct: 193 ALEPHHQMLPVGIITSTLGAQVVVEGVEKHDPLNEGSILWLTESRKPLGLIDEIFGPVKN 252

Query: 556 PFYLVRFNTDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEKGYDIYGDCEEELSDEAV 377
           P+Y+VR+N++++VP  + EG  IS+V EFA  +L++   LY KGYD  G  +EELSDE  
Sbjct: 253 PYYVVRYNSESEVPTGINEGTLISFVPEFADHVLNNQ-DLYRKGYDASGANDEELSDEME 311

Query: 376 FSDDEKEAEFYRSKGMTKRGPNTPDKSPHK 287
           FSDDEKEAE  R    TKRG N  + +  K
Sbjct: 312 FSDDEKEAEHKRMHRTTKRGVNDQNHAKKK 341


>ref|XP_006357520.1| PREDICTED: H/ACA ribonucleoprotein complex non-core subunit
           NAF1-like isoform X4 [Solanum tuberosum]
          Length = 668

 Score =  154 bits (390), Expect = 4e-35
 Identities = 95/249 (38%), Positives = 132/249 (53%)
 Frame = -2

Query: 892 DLEEGEIRTAEDSEPKGGGKKVYDDVLDSDEEEQVRXXXXXXXXXXXXXXXESLQPHHIT 713
           D+EEGEI  ++  E  G      DD  D+  +  +R                +LQPHH  
Sbjct: 174 DMEEGEIVASDVDEMVGWD----DDDEDTGVKGPIRSKNEVQVLPPVPEVTATLQPHHQM 229

Query: 712 IPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTEKRSPLGFIDEVFGPVKNPFYLVRFN 533
            P             VEG+E    L +G+ILW+TE RSPLG +DE+FGPVKNP+Y+VR+N
Sbjct: 230 QPVGVVTSTIGAQVVVEGVEKHSPLCDGSILWITENRSPLGIVDEIFGPVKNPYYIVRYN 289

Query: 532 TDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEKGYDIYGDCEEELSDEAVFSDDEKEA 353
           +D +VP  +  G  IS+V EF+  +L+D+ SLY+KGYD  G+ +EE S++  FSDDEKEA
Sbjct: 290 SDNEVPPGIHPGTLISFVPEFSSHILNDN-SLYKKGYDASGENDEEASEDE-FSDDEKEA 347

Query: 352 EFYRSKGMTKRGPNTPDKSPHKPFERQGKHEVVDKRKKNFDGRKGNYQRNNVNRTDEQSQ 173
           E  R   M KRG     K  +K            K K+N   R  N++ +    TD Q +
Sbjct: 348 EHRRMLKMKKRGITNDQKPGNK-----------KKDKRNLKNRSQNWKHDQGVATDVQHE 396

Query: 172 QGSFPMQQT 146
            G   + Q+
Sbjct: 397 NGKPSVDQS 405


>ref|XP_006357519.1| PREDICTED: H/ACA ribonucleoprotein complex non-core subunit
           NAF1-like isoform X3 [Solanum tuberosum]
          Length = 689

 Score =  154 bits (390), Expect = 4e-35
 Identities = 95/249 (38%), Positives = 132/249 (53%)
 Frame = -2

Query: 892 DLEEGEIRTAEDSEPKGGGKKVYDDVLDSDEEEQVRXXXXXXXXXXXXXXXESLQPHHIT 713
           D+EEGEI  ++  E  G      DD  D+  +  +R                +LQPHH  
Sbjct: 195 DMEEGEIVASDVDEMVGWD----DDDEDTGVKGPIRSKNEVQVLPPVPEVTATLQPHHQM 250

Query: 712 IPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTEKRSPLGFIDEVFGPVKNPFYLVRFN 533
            P             VEG+E    L +G+ILW+TE RSPLG +DE+FGPVKNP+Y+VR+N
Sbjct: 251 QPVGVVTSTIGAQVVVEGVEKHSPLCDGSILWITENRSPLGIVDEIFGPVKNPYYIVRYN 310

Query: 532 TDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEKGYDIYGDCEEELSDEAVFSDDEKEA 353
           +D +VP  +  G  IS+V EF+  +L+D+ SLY+KGYD  G+ +EE S++  FSDDEKEA
Sbjct: 311 SDNEVPPGIHPGTLISFVPEFSSHILNDN-SLYKKGYDASGENDEEASEDE-FSDDEKEA 368

Query: 352 EFYRSKGMTKRGPNTPDKSPHKPFERQGKHEVVDKRKKNFDGRKGNYQRNNVNRTDEQSQ 173
           E  R   M KRG     K  +K            K K+N   R  N++ +    TD Q +
Sbjct: 369 EHRRMLKMKKRGITNDQKPGNK-----------KKDKRNLKNRSQNWKHDQGVATDVQHE 417

Query: 172 QGSFPMQQT 146
            G   + Q+
Sbjct: 418 NGKPSVDQS 426


>ref|XP_006357518.1| PREDICTED: H/ACA ribonucleoprotein complex non-core subunit
           NAF1-like isoform X2 [Solanum tuberosum]
          Length = 722

 Score =  154 bits (390), Expect = 4e-35
 Identities = 95/249 (38%), Positives = 132/249 (53%)
 Frame = -2

Query: 892 DLEEGEIRTAEDSEPKGGGKKVYDDVLDSDEEEQVRXXXXXXXXXXXXXXXESLQPHHIT 713
           D+EEGEI  ++  E  G      DD  D+  +  +R                +LQPHH  
Sbjct: 228 DMEEGEIVASDVDEMVGWD----DDDEDTGVKGPIRSKNEVQVLPPVPEVTATLQPHHQM 283

Query: 712 IPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTEKRSPLGFIDEVFGPVKNPFYLVRFN 533
            P             VEG+E    L +G+ILW+TE RSPLG +DE+FGPVKNP+Y+VR+N
Sbjct: 284 QPVGVVTSTIGAQVVVEGVEKHSPLCDGSILWITENRSPLGIVDEIFGPVKNPYYIVRYN 343

Query: 532 TDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEKGYDIYGDCEEELSDEAVFSDDEKEA 353
           +D +VP  +  G  IS+V EF+  +L+D+ SLY+KGYD  G+ +EE S++  FSDDEKEA
Sbjct: 344 SDNEVPPGIHPGTLISFVPEFSSHILNDN-SLYKKGYDASGENDEEASEDE-FSDDEKEA 401

Query: 352 EFYRSKGMTKRGPNTPDKSPHKPFERQGKHEVVDKRKKNFDGRKGNYQRNNVNRTDEQSQ 173
           E  R   M KRG     K  +K            K K+N   R  N++ +    TD Q +
Sbjct: 402 EHRRMLKMKKRGITNDQKPGNK-----------KKDKRNLKNRSQNWKHDQGVATDVQHE 450

Query: 172 QGSFPMQQT 146
            G   + Q+
Sbjct: 451 NGKPSVDQS 459


>ref|XP_006357517.1| PREDICTED: H/ACA ribonucleoprotein complex non-core subunit
           NAF1-like isoform X1 [Solanum tuberosum]
          Length = 743

 Score =  154 bits (390), Expect = 4e-35
 Identities = 95/249 (38%), Positives = 132/249 (53%)
 Frame = -2

Query: 892 DLEEGEIRTAEDSEPKGGGKKVYDDVLDSDEEEQVRXXXXXXXXXXXXXXXESLQPHHIT 713
           D+EEGEI  ++  E  G      DD  D+  +  +R                +LQPHH  
Sbjct: 249 DMEEGEIVASDVDEMVGWD----DDDEDTGVKGPIRSKNEVQVLPPVPEVTATLQPHHQM 304

Query: 712 IPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTEKRSPLGFIDEVFGPVKNPFYLVRFN 533
            P             VEG+E    L +G+ILW+TE RSPLG +DE+FGPVKNP+Y+VR+N
Sbjct: 305 QPVGVVTSTIGAQVVVEGVEKHSPLCDGSILWITENRSPLGIVDEIFGPVKNPYYIVRYN 364

Query: 532 TDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEKGYDIYGDCEEELSDEAVFSDDEKEA 353
           +D +VP  +  G  IS+V EF+  +L+D+ SLY+KGYD  G+ +EE S++  FSDDEKEA
Sbjct: 365 SDNEVPPGIHPGTLISFVPEFSSHILNDN-SLYKKGYDASGENDEEASEDE-FSDDEKEA 422

Query: 352 EFYRSKGMTKRGPNTPDKSPHKPFERQGKHEVVDKRKKNFDGRKGNYQRNNVNRTDEQSQ 173
           E  R   M KRG     K  +K            K K+N   R  N++ +    TD Q +
Sbjct: 423 EHRRMLKMKKRGITNDQKPGNK-----------KKDKRNLKNRSQNWKHDQGVATDVQHE 471

Query: 172 QGSFPMQQT 146
            G   + Q+
Sbjct: 472 NGKPSVDQS 480


>ref|XP_002319375.2| hypothetical protein POPTR_0013s14160g [Populus trichocarpa]
           gi|550325825|gb|EEE95298.2| hypothetical protein
           POPTR_0013s14160g [Populus trichocarpa]
          Length = 697

 Score =  154 bits (389), Expect = 5e-35
 Identities = 99/269 (36%), Positives = 148/269 (55%), Gaps = 24/269 (8%)
 Frame = -2

Query: 937 GKNGIQLDEKLGGDTDLEEGEIRTAEDSEPKGG------GKKVYDDVL------------ 812
           G+  ++++++L G  D+EEGEIR A+  E   G      G++  ++V+            
Sbjct: 225 GEVRMEVNKRLDGLGDMEEGEIRDADGEEMVAGNDSEDEGEEEEEEVVEEEEDDGYKMVE 284

Query: 811 --DSDEEEQVRXXXXXXXXXXXXXXXE----SLQPHHITIPAXXXXXXXXXXXXVEGIEC 650
             D DEEE                       SL+ HH  +P             V+G+E 
Sbjct: 285 WSDVDEEEDAATGEPIRSKNEFLSPVPPVHASLELHHQMLPVGVVLSAIGPQVIVQGVEK 344

Query: 649 PRALNEGTILWVTEKRSPLGFIDEVFGPVKNPFYLVRFNTDADVPAYVEEGVRISYVSEF 470
              LNEG+ILW+TEKRSPLG +DE+FGPVKNP+Y+VR+N++++VP+ V  G  IS+V EF
Sbjct: 345 HNPLNEGSILWITEKRSPLGLVDEIFGPVKNPYYVVRYNSESEVPSGVLNGTLISFVPEF 404

Query: 469 AKFLLDDDPSLYEKGYDIYGDCEEELSDEAVFSDDEKEAEFYRSKGMTKRGPNTPDKSPH 290
           A  +L +  +L++KGYD  G+ +EEL++E  FSDDEKEAE  R   M+KRG +       
Sbjct: 405 ANHVL-NVKNLHKKGYDASGEYDEELTNETEFSDDEKEAEHKRMLKMSKRGVSD------ 457

Query: 289 KPFERQGKHEVVDKRKKNFDGRKGNYQRN 203
              E+ GK++   ++ KN   R G ++ N
Sbjct: 458 ---EKSGKNKNNRRKVKN---RGGGWKNN 480


>ref|XP_002329402.1| predicted protein [Populus trichocarpa]
           gi|566243915|ref|XP_006371600.1| hypothetical protein
           POPTR_0019s13540g [Populus trichocarpa]
           gi|550317479|gb|ERP49397.1| hypothetical protein
           POPTR_0019s13540g [Populus trichocarpa]
          Length = 685

 Score =  154 bits (388), Expect = 6e-35
 Identities = 88/210 (41%), Positives = 118/210 (56%), Gaps = 18/210 (8%)
 Frame = -2

Query: 892 DLEEGEIRTAEDSEPKG-------------GGKKVYDDVLDSDEE-----EQVRXXXXXX 767
           D+EEGEIR     E  G             G K V     D DE+     + +R      
Sbjct: 234 DMEEGEIRDVNGEEMVGRDDTDVEVFEEEDGDKMVEWSDFDEDEDAVNEGDPIRSKNELK 293

Query: 766 XXXXXXXXXESLQPHHITIPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTEKRSPLGF 587
                     SL+PHH                 VEG+E    LNEG+ILW+TEKRSPLG 
Sbjct: 294 FLPPVPPVVASLEPHHQMQAVGAVLSAIGSQVIVEGVEKHNPLNEGSILWITEKRSPLGL 353

Query: 586 IDEVFGPVKNPFYLVRFNTDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEKGYDIYGD 407
           +DE+FGPVKNP+Y+VR+N++++VP  +  G  IS+V EFA  +L +D +LY+KGYD  G+
Sbjct: 354 VDEIFGPVKNPYYVVRYNSESEVPGGIHNGTVISFVPEFANHVL-NDKNLYKKGYDASGE 412

Query: 406 CEEELSDEAVFSDDEKEAEFYRSKGMTKRG 317
            +EEL+ EA FSDD++EAE+ R   M+KRG
Sbjct: 413 FDEELTKEAEFSDDDEEAEYKRMLKMSKRG 442


>emb|CBI28917.3| unnamed protein product [Vitis vinifera]
          Length = 444

 Score =  152 bits (383), Expect = 2e-34
 Identities = 84/178 (47%), Positives = 114/178 (64%)
 Frame = -2

Query: 736 SLQPHHITIPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTEKRSPLGFIDEVFGPVKN 557
           +LQPHH T+P             VEG E  + L EG+ILW+TE RSPLG +DE+FGPVKN
Sbjct: 40  TLQPHHQTLPVGVVSSIIGAKVIVEGAEKHKPLTEGSILWITESRSPLGLVDEIFGPVKN 99

Query: 556 PFYLVRFNTDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEKGYDIYGDCEEELSDEAV 377
           P+Y+VR+N+D++VPA + EG  IS+V EFA  +L ++ +LY+KGYD  G+ +EE+SD   
Sbjct: 100 PYYVVRYNSDSEVPAGINEGTFISFVPEFANHIL-NERNLYKKGYDASGENDEEVSD-VE 157

Query: 376 FSDDEKEAEFYRSKGMTKRGPNTPDKSPHKPFERQGKHEVVDKRKKNFDGRKGNYQRN 203
           FSDDE+EAE  ++  M KRG N       KP  ++ K     K+ KN DG   N Q +
Sbjct: 158 FSDDEEEAEHKKTLKMIKRGTN-----DQKPGNKKNKR----KKVKNRDGAWKNGQHS 206


>ref|XP_006418226.1| hypothetical protein EUTSA_v10006867mg [Eutrema salsugineum]
           gi|557095997|gb|ESQ36579.1| hypothetical protein
           EUTSA_v10006867mg [Eutrema salsugineum]
          Length = 773

 Score =  150 bits (379), Expect = 7e-34
 Identities = 86/238 (36%), Positives = 130/238 (54%)
 Frame = -2

Query: 943 EGGKNGIQLDEKLGGDTDLEEGEIRTAEDSEPKGGGKKVYDDVLDSDEEEQVRXXXXXXX 764
           E  KN  + D+    D D E  E+    D E         D+ L    +E +R       
Sbjct: 306 EDDKNAAEDDDDSDDDDDDEVNEMIAWSDDE---------DEDLGLQTKEPIRSKNELKE 356

Query: 763 XXXXXXXXESLQPHHITIPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTEKRSPLGFI 584
                    +L+PHH+T+P             VEG+E    L EG+ILW+TE+R+PLG +
Sbjct: 357 LPPVPAVDVTLEPHHVTLPVGVVLSVMSTQVIVEGMEKHSPLTEGSILWITERRTPLGLV 416

Query: 583 DEVFGPVKNPFYLVRFNTDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEKGYDIYGDC 404
           DE+FGPVK P+Y+VRFN++++VP  + +G  +S+V+++A+ +L +   L +KGYD  GD 
Sbjct: 417 DEIFGPVKCPYYIVRFNSESEVPEGIIQGTPVSFVADYAQHIL-NIKELQKKGYDASGDN 475

Query: 403 EEELSDEAVFSDDEKEAEFYRSKGMTKRGPNTPDKSPHKPFERQGKHEVVDKRKKNFD 230
           +EE+S++  FSDDEKEAE+ R + M KRG     K+ +            +K+KKN D
Sbjct: 476 DEEISEDLEFSDDEKEAEYRRMRKMEKRGMGNDQKNGN----------ARNKKKKNRD 523


>ref|NP_171852.2| nuclear assembly factor 1 [Arabidopsis thaliana]
            gi|9280664|gb|AAF86533.1|AC002560_26 F21B7.15
            [Arabidopsis thaliana] gi|332189462|gb|AEE27583.1|
            nuclear assembly factor 1 [Arabidopsis thaliana]
          Length = 801

 Score =  150 bits (378), Expect = 9e-34
 Identities = 96/265 (36%), Positives = 144/265 (54%), Gaps = 18/265 (6%)
 Frame = -2

Query: 919  LDEKLGGDTDLEEGEIRTAEDSEPKGGGKKVY------DDVLDSDEEEQVRXXXXXXXXX 758
            LDE+  GD D+E+ +    +D +      ++       DD L    +E +R         
Sbjct: 308  LDEE-NGDDDIEDEDDDDDDDDDDDDDVNEMVAWSNDEDDDLGLQTKEPIRSKNELKELP 366

Query: 757  XXXXXXESLQPHHITIPAXXXXXXXXXXXXVEGIECPRALNEGTILWVTEKRSPLGFIDE 578
                   +L+PHH T+P             VEG+E    L EG+ILW+TEKR+PLG +DE
Sbjct: 367  PVPPVDVTLEPHHATLPVGVVLSVMSAQVIVEGMEKHSPLTEGSILWITEKRTPLGLVDE 426

Query: 577  VFGPVKNPFYLVRFNTDADVPAYVEEGVRISYVSEFAKFLLDDDPSLYEKGYDIYGDCEE 398
            +FGPVK P+Y+VRFN++++VP  V +G  +S+V++FA+ +L +   L +KGYD  GD +E
Sbjct: 427  IFGPVKCPYYIVRFNSESEVPEGVCQGTPVSFVADFAQHIL-NIKELQKKGYDASGDNDE 485

Query: 397  ELSDEAVFSDDEKEAEFYRSKGMTKRGPNTPDKSPHKPFERQGKHEVVDKRKKNFD-GR- 224
            E+ DE  FSDDEKEAE+ R + + KRG  +  K+ +            +K+KKN D GR 
Sbjct: 486  EIPDELEFSDDEKEAEYRRMQKLEKRGMMSDQKTGN----------TRNKKKKNRDPGRP 535

Query: 223  ----KGNYQRN------NVNRTDEQ 179
                 G + +N      + NR+D Q
Sbjct: 536  TSSYSGEWTKNQGSSSLSSNRSDPQ 560