BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00016879
         (422 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza s...    56   6e-06
gb|ABF96035.1| retrotransposon protein, putative, unclassified [...    55   1e-05

>gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa Japonica
           Group] gi|108706958|gb|ABF94753.1| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 2011

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
 Frame = +2

Query: 14  EGI*SYYRKIKETVGDVKGAGGTLTNLDICRKLVSSLPARFETKAAAYEEVNRVVTDPSP 193
           E +   Y ++   V D+KG G   TNL++ +K++ +LP ++ET       +N  ++  +P
Sbjct: 126 ESVNDMYGRLNVIVNDLKGLGANYTNLEVAQKMLRALPEKYETLVTML--INSDMSRMTP 183

Query: 194 DELYGILQA---YELQKFPNRTAGRNLVLKAQEFPEKKEDHTKVEDTRNDSEAEELALTA 364
             L G +     Y+L+K     A  +    A +   + +  +KV +   D E EE+ L A
Sbjct: 184 ASLLGKINTNDMYKLKKKEMEEASPSKKCIALQAEVEDKSKSKVNEVNKDLE-EEIVLLA 242

Query: 365 RRVRNIYVKRRFRG 406
           RR  ++  +R+ RG
Sbjct: 243 RRFNDLLGRRKERG 256


>gb|ABF96035.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1705

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
 Frame = +2

Query: 14  EGI*SYYRKIKETVGDVKGAGGTLTNLDICRKLVSSLPARFETKAAAYEEVNRVVTDPSP 193
           E +   Y K+   V D+KG G   T+L++ +K++ +LP ++ET       +N  ++  +P
Sbjct: 53  ESVNDMYGKLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLVTML--INSDMSRMTP 110

Query: 194 DELYGILQA---YELQKFPNRTAGRNLVLKAQEFPEKKEDHTKVEDTRNDSEAEELALTA 364
             L G +     Y+L+K     A  +    A +   + +  +KV +   D E EE+ L A
Sbjct: 111 ASLLGKINTNDMYKLKKKEMEEASPSKKCIALQAEVEDKSKSKVNEVNEDLE-EEMVLLA 169

Query: 365 RRVRNIYVKRRFRG 406
           RR  ++  +R+ RG
Sbjct: 170 RRFNDLLGRRKERG 183