BLASTX nr result

ID: Ephedra25_contig00016820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00016820
         (611 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532192.1| conserved hypothetical protein [Ricinus comm...    60   6e-07
ref|XP_002335272.1| predicted protein [Populus trichocarpa]            58   2e-06

>ref|XP_002532192.1| conserved hypothetical protein [Ricinus communis]
           gi|223528124|gb|EEF30195.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 461

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
 Frame = +1

Query: 127 KQSEIKSCYQEDFFFVG----DMFILDCCFVIEMCVLLAGKA-----DPILGQIRRGGSL 279
           K+ EI+ CY E+  +      +M ILD CF+IE+  ++A        DPI         +
Sbjct: 125 KEEEIRECYSENIGYSSHQLIEMMILDGCFIIELLCIVARLVQTHLDDPIFNM----AWM 180

Query: 280 TASILRDVLMMENQLPFFLLEMLFGLQNLPL 372
            + ++RD+L +ENQ+PFF+LE LFGL ++ L
Sbjct: 181 FSFLMRDLLRLENQIPFFVLESLFGLVSVTL 211


>ref|XP_002335272.1| predicted protein [Populus trichocarpa]
          Length = 458

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
 Frame = +1

Query: 106 LQQQFETKQSEIKSCYQEDFFFVGDMFILDCCFVIEMCVLLAGKA-----DPILGQIRRG 270
           ++++     SE   C +++F    +M +LD CF+IE+  ++ G       DPI       
Sbjct: 126 IEEKIRDCYSETIECSRQEFI---EMMVLDGCFIIELFCIIGGIVQRDIDDPIFNMTL-- 180

Query: 271 GSLTASILRDVLMMENQLPFFLLEMLFGLQNLPLSYRLQIPCWGYEKVFRLPTLAIKKWR 450
             +   I+RD+L +ENQ+PFF+LE LF  +   LS R QI       V  L  LA+K + 
Sbjct: 181 --MFFFIMRDLLKLENQIPFFVLETLF--ETSILSSRKQI-------VSSLTELALKFF- 228

Query: 451 WNTGKQILQRPP-----------AHLLDCLQSLMASYLSRELHEE 552
                   +RPP            HLLD  +S +    S+E+H +
Sbjct: 229 ----DHAAERPPEVLRRYKDIRGEHLLDLFRSTIIPASSQEVHRK 269


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